These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9794#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 884 fasta sequence [TCTTTTTTTTAAC-CAGCTGCAATAAAATGCTTCAATACATTCCAGTTCTTACAAGATACAACAGATTCAGATGGAGTGCTGATATCCTACAAATATCATTTGGCATTTTGACTAACTGTACTATTTCTGACAACAGAGATACAGATACAAGGCCAATAGCTCCCATAGCTCAA-ACATAC-TTACGATCCCGAATTAAAGCACTCTAATCCTCGTTATCTGTACTACCTTGCCTCCACTACAGAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGGCAACCAACGAACCGAGCACGATGATCGCGGCGATCAGCAGGGTCTCGCCCCTGCCGCATCGCGTCAGGCCGAAGATCTT-GAGGTAGCAGATGCAGGGGAGCAGCATGGAGGCCATGACGCTGAGCAGCGAGCCGACGAGCGCCATGAGGTGGCCGAAGAAGGGCACCGTGAGGGCGATCACCACCGTGCTGACGACGATGAGGGTCCTGATCAGCACGTTGACGGACCTCTTGTTGCCGGCGAGCAGCTTCTCCTCGATCGCCGTCGCGACCGGGGTCACCATCAGGGCGTACTTGGAGAACGGGTTGATCAGCGTCGTGTAGATCGCCAGCTTCGAGCTGATCTTTCCCTCCGGGAGGTTCAGTGTCACCTGAGATTTGACGTCGTCGCCGTACATGAGGTAGCCGAGTATGGCCATGGATCCGTAGTTGACAGTGCACGCCACGAAGCATATGACCAGTACC] [+] EMBL CB642164 [TCTTTTTTTTAAC CAGCTGCAATAAAATGCTTCAATACATTCCAGTTCTTACAAGATACAACAGATTCAGATGGAGTGCTGATATCCTACAAATATCATTTGGCATTTTGACTAACTGTACTATTTCTGACAACAGAGATACAGATACAAGGCCAATAGCTCCCATAGCTCAA ACATAC TTACGATCCCGAATTAAAGCACTCTAATCCTCGTTATCTGTACTACCTTGCCTCCACTACAGAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGGCAACCAACGAACCGAGCACGATGATCGCGGCGATCAGCAGGGTCTCGCCCCTGCCGCATCGCGTCAGGCCGAAGATCTT GAGGTAGCAGATGCAGGGGAGCAGCATGGAGGCCATGACGCTGAGCAGCGAGCCGACGAGCGCCATGAGGTGGCCGAAGAAGGGCACCGTGAGGGCGATCACCACCGTGCTGACGACGATGAGGGTCCTGATCAGCACGTTGACGGACCTCTTGTTGCCGGCGAGCAGCTTCTCCTCGATCGCCGTCGCGACCGGGGTCACCATCAGGGCGTACTTGGAGAACGGGTTGATCAGCGTCGTGTAGATCGCCAGCTTCGAGCTGATCTTTCCCTCCGGGAGGTTCAGTGTCACCTGA ] [-] EMBL BM038865 [ttTTTTTTTTAACACAGCTGCAATAAAA GGTTCAATACATTCAAGTTCTTACAAGATACAACAGATTCAGATGGAGTGCTGATATCCTACAAATATCA TTGGCA TTTGACTAACTGTACTATTTCTGACAACAGAGATACAGATACAAGGGCAATAGCTCCCATAGCTCAAGACATACGTTACGATCCCGAATTAAAGCACTCTAATCCTCGTTATCTGTACTACCTTGCCTCCACTACAGAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGG AACCAACGAACCGAGCACGATGATCGCGG GATCAGCAGGGTCTCGCCCCTG CG ATCGCGTCAGGGCGAAGATCTTGGAGGgtancc ] [+] EMBL CB629946 [ ATAAAATGCTTCAATACCTTTTAGTTCTTACAAGATACAACAGATTCAGATGGAGTGCTGATATCCTACAAATATCATTTGGCATTTTGACTAACTGTACTATTTCTGACAACAGAGATACAGATACAAGGCCAATAGCTCCCATAGCTCAA ACATAC TTACGATCCCGAATTAAAGCACTCTAATCCTCGTTATCTGTACTACCTTGCCTCCACTACAGAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGGCAACCAACGAACCGAGCACGATGATCGCGGCGATCAGCAGGGTCTCGCCCCTGCCGCATCGCGTCAGGCCGAAGATCTT GAGGTAGCAGATGCAGGGGAGCAGCATGGAGGCCATGACGCTGAGCAGCGAGCCGACGAGCGCCATGAGGTGGCCGAAGAAGGGCACCGTGAGGGCGATCACCACCGTGCTGACGACGATGAGGGTCCTGATCAGCACGTTGACGGACCTCTTGTTGCCGGCGAGCAGCTTCTCCTCGATCGCCGTCGCGACC ] [-] EMBL CA999895 [ TACAAGGCCAATAGCTCCCATAGCTCAA ACATAC TTACGATCCCGAATTAAAGCACTCTAATCCTCGTTATCTGTACTACCTTGCCTCCACTACAGAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGGCAACCAACGAACCGAGCACG ] [-] EMBL CB000123 [ TGTACTACCTTCCCTCCACTACAGAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTCCGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAAAAGGTACCCGTCGCGGCAACCAACGAACCGAGCACGA ] [-] EMBL CB629945 [ tTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGGCAACCAACGAACCGAGCACGATGATCGCGGCGATCAGCAGGGTCTCGCCCCTGCCGCATCGCGTCAGGCCGAAGATCTT GAGGTAGCAGATGCAGGGGAGCAGCATGGAGGCCATGACGCTGAGCAGCGAGCCGACGAGCGCCATGAGGTGGCCGAAGAAGGGCACCGTGAGGGCGATCACCACCGTGCTGACGACGATGAGGGTCCTGATCAGCACGTTGACGGACCTCTTGTTGCCGGCGAGCAGCTTCTCCTCGATCGCCGTCGCGACCGGGGTCACCATCAGGGCGTACTTGGAGAACGGGTTGATCAGCGTCGTGTAGATCGCCAGCTTCGAGCTGATCTTTCCCTCCGGGAGGTTCAGTGTCACCTGAGATTTGACGTCGTCGCCGTACATGAGGTAGCCGAGTATGGCCATGGATCCGTAGTTGACAGTGCACGCCACGAAGCATATGACCAGTACC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||