These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9805#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1379 fasta sequence [CTGACGGTCGCGCACTCGCACTCGCACCGCACCAACATGGACTACGGCGCCGCCGCCTCTCACGCCGCCGCCGCGGGGCCGCCGCCGGCGGCGGATCCCCACCACCCGCACTACCCTCACCCCTACGCCGGCTACCCTTACCCCTACGCGGCGTACAACCCGGCCGCCCCCGCCTCGGAGCCCGCCACCGCCGCCTCATCCTCCTACTACTACCCCACCGCGGTCTCCGCCGCCGCCTCTGCCGGCCAGTACGACCCCTACGCGGCGTACCAGTACTACGCTGACCCCGCCGCGGCCGGGCCAGGCAGCGGCGGCGCCGGGGGCCTGCCGGGGTACTACTTCGGCGCCGGTGAGGCGTTTCAGGCCCCGGCATCGTCGGCGTCGCAGGGTGCTCCGGCGGCTACCGCGGCGGCTGGCAAGGAGGCCGGGAAGCACTTTGGGTTCGATCCTCAGCGCTACGCGCAGGCAGCAGCCGCCAGATCTTCGAATGGAGTGGCACCAGCAATTGCAGCCCCAGGCATGCACCCTGCTCAGTGGAATGCCCATTTCGGGCATCCTGTGCCGAAAATTGTTTCAAGAAAGCATATAAAGAAAAAGCCAAAGGTTGTGCAACCATTGACTTGTGAAGTTTGCAAGATTCAGTGCGATACTCCAGAAGTTCTAAGGATCCATAAGACGGGA-AAGAAGCACAAGAAAAACTTAGAGAGGCTACAAGACTCTATCACACCTAAACCAGTAAAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAATATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATTCCTGCTGCACAAACGAAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTACTTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTCAACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAGAAACAGCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTTCTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGAATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGCCTGCCGCAGATAAGTAGTCGGAGTTTGGAGCGAAGGTTGTCTTGTGCCTGTCTTCCAGTTGTTTATTGACCAATCCAAGATTGCAGAATGTTGCCCTCGCTATGTGAATTTAGCCCTGTTGTTTAATGACAAAACGTCAATTCGAAATTGTATATTTCACCGTCGGATGATACTCCCTTTGTTCAAGAATGTG] [+] EMBL AK066144 [CTGACGGTCGCGCACTCGCACTCGCACCGCACCAACATGGACTACGGCGCCGCCGCCTCTCACGCCGCCGCCGCGGGGCCGCCGCCGGCGGCGGATCCCCACCACCCGCACTACCCTCACCCCTACGCCGGCTACCCTTACCCCTACGCGGCGTACAACCCGGCCGCCCCCGCCTCGGAGCCCGCCACCGCCGCCTCATCCTCCTACTACTACCCCACCGCGGTCTCCGCCGCCGCCTCTGCCGGCCAGTACGACCCCTACGCGGCGTACCAGTACTACGCTGACCCCGCCGCGGCCGGGCCAGGCAGCGGCGGCGCCGGGGGCCTGCCGGGGTACTACTTCGGCGCCGGTGAGGCGTTTCAGGCCCCGGCATCGTCGGCGTCGCAGGGTGCTCCGGCGGCTACCGCGGCGGCTGGCAAGGAGGCCGGGAAGCACTTTGGGTTCGATCCTCAGCGCTACGCGCAGGCAGCAGCCGCCAGATCTTCGAATTGAGTGGCACCAGCAATTGCAGCCCCAGGCATGCACCCTGCTCAGTGGAATGCCCATTTCGGGCATCCTGTGCCGAAAATTGTTTCAAGAAAGCATATAAAGAAAAAGCCAAAGGTTGTGCAACCATTGACTTGTGAAGTTTGCAAGATTCAGTGCGATACTCCAGAAGTTCTAAGGATCCATAAGACGGGA AAGAAGCACAAGAAAAACTTAGAGAGGCTACAAGACTCTATCACACCTAAACCAGTAAAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAATATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATTCCTGCTGCACAAACGAAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTACTTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTCAACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAGAAACAGCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTTCTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGAATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGCCTGCCGCAGATAAGTAGTCGGAGTTTGGAGCGAAGGTTGTCTTGTGCCTGTCTTCCAGTTGTTTATTGACCAATCCAAGATTGCAGAATGTTGCCCTCGCTATGTGAATTTAGCCCTGTTGTTTAATGACAAAACGTCAATTCGAAATTGTATATTTCACCGTCGGATGATACTCCCTTTGTTCAAGAA ] [+] EMBL AK058350 [ TCGCACTCGCACCGCACCAACACGGACTACGGCGCCGCCGCCTCTCACGCCGCCGCCGCGGGGCCGCCGCCGGCGGCGGATCCCCACCACCCGCACTACCCTCACCCCTACGCCGGCTACCCTTACCCCTACGCGGCGTACAACCCGGCCGCCCCCGCCTCGGAGCCCGCCACCGCCGCCTCATCCTCCTACTACTACCCCACCGCGGTCTCCGCCGCCGCCTCTGCCGGCCAGTACGACCCCTACGCGGCGTACCAGTACTACGCTGACCCCGCCGCGGCCGGGCCAGGCAGCGGCGGCGCCGGGGGCCTGCCGGGGTACTACTTCGGCGCCGGTGAGGCGTTTCAGGCCCCGGCATCGTCGGCGTCGCAGGGTGCTCCGGCGGCTACCGCGGCGGCTGGCAAGGAGGCCGGGAAGCACTTTGGGTTCGATCCTCAGCGCTACGCGCAGGCAGCAGCCGCCAGATCTTCGAATGGAGTGGCACCAGCAATTGCAGCCCCAGGCATGCACCCTGCTCAGTGGAATGCCCATTTCGGGCATCCTGTGCCGAAAATTGTTTCAGGAAAGCATATAAAGAAAAAGCCAAAGGTTGTGCAACCATTGACTTGTGAAGTTTGCAAGATTCAGTGCGATACTCCAGAAGTTCTAAGGATCCATAAGACGGGA AAGAAGCACAAGAAAAACTTAGAGAGGCTACAAGACTCTATCACACCTAAACCAGTAAAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAATATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATTCCTGCTGCACAAACGAAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTACTTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTCAACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAGAAACAGCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTTCTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGAATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGCCTGCCGCAGATAAGTAGTCGGAGTTTGGAGCGAAGGTTGTCTTGTGCCTGTCTTCCAGTTGTTTATTGACCAATCCAAGATTGCAGAATGTTGCCCTCGCTATGTGAATTTAGCCCTGTTGTTTAATGACAAAACGTCAATTCGAAATTGTATATTTCACCGTCGGATGATACTCCCTTTGTTCAAGAATGTG] [+] EMBL BP184370 [ TACGCGGCNTAAAACCCGGCCGCCCCCGCCTCGGAGCCCGCCACCGCCGCCTCATCCTCCTACTACTACCCCACCGCGGTCTCCGCCGCCGCCTCTGCCGGCCAGTACGACCCCTACGCGGCGTACCAGTACTACGCTGACCCCGCCGCGGCCGGGCCAGGCAGCGGCGGCGCCGGGGGCCTGCCGGGGTACTACTTCGGCGCCGGTGAGGCGTTTCAGGCCCCGGCATCGTCGGCGTCGCAGGGTGCTCCGGCGGCTACCGCGGCGGCTGGCAAGGAGGCCGGGAAGCACTTTGGGTTCGATCCTCAGCGCTACGCGCAGGCAGCAGCCGCCAGATCTTCGAATGGAGTGGCACCAGCAATTGCAGCCCCAGGCATGCACCCTGCTCAGTGGAATGCCCATTTCGGGCATCCTGTGCCGAAAATTGTTTCAAGAAAGCATATAAAGAAAAAGCCAAAGGTTGTGCAACCATT ] [+] EMBL BP184371 [ CCATAAGACGGGA AAGAAGCACAAGAAAAACTTAGAGAGGCTACAAGACTCTATCACACCTAAACCAGTAAAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAATATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATTCCTGCTGCACAAACGAAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTACCTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTCAACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAGAAACAGCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTTCTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGAATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGCCTGCCGCAGATAAGTAGTCGGAGTTTGGAGCGAAGGTTGTCTTGTGCCTGTCTTCCAGTTGTTTATTGACCAATCCAAGATTGCAGAATGTTGCCCTCGCTATGTGAATTTAGCCCTGTTGTTTAATGACAAAACGTCAATTCGAAATTGTATATTTCACCGTaaaaa ] [-] EMBL CA759100 [ AGA GAGACAAGGGGCACAAGAAAAACTTAGAGAGGCTACAAGACTCTATCACACCTAAACCAGTAGAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAATATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATGCCTGCTGCACAAACGAAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTACTTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTCAACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAGAAACACCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTTCTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGAATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGCCTGCCGCAAAAAAaaaa ] [+] EMBL CA766954 [ GCACAAGAAAAACTTAGAGAGGCTACAAGACTCTATCACACCTAAACCAGTAGAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAATATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATGCCTGCTGCACAAACGAAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTACTTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTCAACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAGAAACACCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTTCTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGAATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||