These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9812#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1088 fasta sequence [CCGTTTTCAAAACTGACCCCTCCTCTCTCTCTCTCTATCTCTCCTCCTCCCTCATCCTCCTCTCCTCTCTGTGTTTCTCTCGTTCCTCGCTTCCTTCGCTTCGCCCCCCTTCTGGCATCCTTCCTCGCGCGGCCTCTCCCTCCCATGGTCCTCATGGCCGCCGTCGACGACCACGACCGCCACCGAGCCGGCAATTCCTCGTCTCCTTCGGAGGATTCCCCGGCTCCGGCTCCGGCTCCGGCTCCCGCTCCCGCTCCGCCGCAGCCGTCGCGCACGCGGCTCCACAGCTTCTCGTTCCCCACCCTCAGCTGGGGCACCCACCGCCTCCTCCGCTGCTCCAAGAACCCCGCCTCGTCGCCCCCTCCCGCGGCGCCGGACACCCCGTCGCCGGACAAGGAGAAGGCGGCCCACCGCTCCACCGACGGCGTGGGCGGCGGCTGTTCGCCTCAGCGGGGTCCGCAGCGGCCGTGGAACCTCCGCACCCGCCGCTCCGCCACGGCCGCGCCGCGTCCGGAGGGATCGGACGACGCGGCCGATGCCGCGCCGGATCGAGCGCCATCGCCGCTGGCGGCGACCAAGAAGCGGGTGTTCTCCATCGTGCTGTCCAAGGAGGAGATCGGCCAGGACTTCAAGGCGATCCGCGGGACTCGCCCCCCGCGCCGGCCCAAGAAGCGCCCCCGCACCGTGCAACGCCAGCTCGACTTGCTGTA-CCCTGGATTGTGCCTAGCGGACCTGACGCCGGAGACATACAAGATTGAAGAGAGGTGATTGGTGTTATTTGTGAAAGCTCCAATGGGAGGGGATTTTCAGATGTTCTGATATCTTTTCTCTTCAGATGTTCTGATCGTTTTCCTTTTGTTATGTGATCATGGGCTAACAAGGTTGCTTCAGAACCGTAATGTTCTGGACGGGTTAGGGGAAGTTTAGTTGGGAATCTCCTCTAATTATGTATTGGATGTGGTTGTTGAGGAGTTTAGGTTGTGGAAATTGATTATTGGGCTTGTAGGATTGTTAATTGTATAAAGTGTAATCATCTGTACATTGTACTATTAATCTATGAAGAATTTTCGTTATTACGAAAAAAAAGA] [+] EMBL AK072744 [CCGTTTTCAAAACTGACCCCTCCTCTCTCTCTCTCTATCTCTCCTCCTCCCTCATCCTCCTCTCCTCTCTGTGTTTCTCTCGTTCCTCGCTTCCTTCGCTTCGCCCCCCTTCTGGCATCCTTCCTCGCGCGGCCTCTCCCTCCCATGGTCCTCATGGCCGCCGTCGACGACCACGACCGCCACCGAGCCGGCAATTCCTCGTCTCCTTCGGAGGATTCCCCGGCTCCGGCTCCGGCTCCGGCTCCCGCTCCCGCTCCGCCGCAGCCGTCGCGCACGCGGCTCCACAGCTTCTCGTTCCCCACCCTCAGCTGGGGCACCCACCGCCTCCTCCGCTGCTCCAAGAACCCCGCCTCGTCGCCCCCTCCCGCGGCGCCGGACACCCCGTCGCCGGACAAGGAGAAGGCGGCCCACCGCTCCACCGACGGCGTGGGCGGCGGCTGTTCGCCTCAGCGGGGTCCGCAGCGGCCGTGGAACCTCCGCACCCGCCGCTCCGCCACGGCCGCGCCGCGTCCGGAGGGATCGGACGACGCGGCCGATGCCGCGCCGGATCGAGCGCCATCGCCGCTGGCGGCGACCAAGAAGCGGGTGTTCTCCATCGTGCTGTCCAAGGAGGAGATCGGCCAGGACTTCAAGGCGATCCGCGGGACTCGCCCCCCGCGCCGGCCCAAGAAGCGCCCCCGCACCGTGCAACGCCAGCTCGACTTGCTGTA CCCTGGATTGTGCCTAGCGGACCTGACGCCGGAGACATACAAGATTGAAGAGAGGTGATTGGTGTTATTTGTGAAAGCTCCAATGGGAGGGGATTTTCAGATGTTCTGATATCTTTTCTCTTCAGATGTTCTGATCGTTTTCCTTTTGTTATGTGATCATGGGCTAACAAGGTTGCTTCAGAACCGTAATGTTCTGGACGGGTTAGGGGAAGTTTAGTTGGGAATCTCCTCTAATTATGTATTGGATGTGGTTGTTGAGGAGTTTAGGTTGTGGAAATTGATTATTGGGCTTGTAGGATTGTTAATTGTATAAAGTGTAATCATCTGTACATTGTACTATTAATCTATGAAGAATTTT ] [+] EMBL AK099957 [ TCCTCCCTCATCCTCCTCTCCTCTCTGTGTTTCTCTCGTTCCTCGCTTCCTTCGCTTCGCCCCCCTTCTGGCATCCTTCCTCGCGCGGCCTCTCCCTCCCATGGTCCTCATGGCCGCCGTCGACGACCACGACCGCCACCGAGCCGGCAATTCCTCGTCTCCTTCGGAGGATTCCCCGGCTCCGGCTCCGGCTCCGGCTCCCGCTCCCGCTCCGCCGCAGCCGTCGCGCACGCGGCTCCACAGCTTCTCGTTCCCCACCCTCAGCTGGGGCACCCACCGCCTCCTCCGCTGCTCCAAGAACCCCGCCTCGTCGCCCCCTCCCGCGGCGCCGGACACCCCGTCGCCGGACAAGGAGAAGGCGGCCCACCGCTCCACCGACGGCGTGGGCGGCGGCTGTTCGCCTCAGCGGGGTCCGCAGCGGCCGTGGAACCTCCGCACCCGCCGCTCCGCCACGGCCGCGCCGCGTCCGGAGGGATCGGACGACGCGGCCGATGCCGCGCCGGATCGAGCGCCATCGCCGCTGGCGGCGACCAAGAAGCGGGTGTTCTCCATCGTGCTGTCCAAGGAGGAGATCGGCCAGGACTTCAAGGCGATCCGCGGGACTCGCCCCCCGCGCCGGCCCAAGAAGCGCCCCCGCACCGTGCAACGCCAGCTCGACTTGCTGTA CCCTGGATTGTGCCTAGCGGACCTGACGCCGGAGACATACAAGATTGAAGAGAGGTGATTGGTGTTATTTGTGAAAGCTCCAATGGGAGGGGATTTTCAGATTTTCTGATATCTTTTCTCTTCAGATGTTCTGATCGTTTTCCTTTTGTTATGTGATCATGGGCTAACAAGGTTGCTTCAGAACCGTAATGTTCTGGACGGGTTAGGGGAAGTTTAGTTGGGAATCTCCTCTAATTATGTATTGGATGTGGTTGTTGAGGAGTTTAGGTTGTGGAAATTGATTATTGGGCTTGTAGGATTGTTAATTGTATAAAGTGTAATCATCTGTACATTGTACTATTAATCTATGAAG ] [+] EMBL CB649860 [ GTGTTTCTCTCGTTCCTCGCTTCCTTCGCTTCGCCCCCCTTCTGGCATCCTTCCTCGCGCGGCCTCTCCCTCCCATGGTCCTCATGGCCGCCGTCGACGACCACGACCGCCACCGAGCCGGCAATTCCTCGTCTCCTTCGGAGGATTCCCCGGCTCCGGCTCCGGCTCCGGCTCCCGCTCCCGCTCCGCCGCAGCCGTCGCGCACGCGGCTCCACAGCTTCTCGTTCCCCACCCTCAGCTGGGGCACCCACCGCCTCCTCCGCTGCTCCAAGAACCCCGCCTCGTCGCCCCCTCCCGCGGCGCCGGACACCCCGTCGCCGGACAAGGAGAAGGCGGCCCACCGCTCCACCGACGGCGTGGGCGGCGGCTGTTCGCCTCAGCGGGGTCCGCAGCGGCCGTGGAACCTCCGCACCCGCCGCTCCGCCACGGCCGCGCCGCGTCCGGAGGGATCGGACGACGCGGCCGATGCCGCGCCGGATCGAGCGCCATCGCCGCTGGCGGCGACCAAGAAGCGGGTGTTCTCCATCGTGCTGTCCAAGGAGGAGATCGGCCAGGACTTCAAGGCGATCCGCGGGACTCGCCCCCCGCGCCGGCCCAAGAAGCGCCCCCGCACCGTGCAACGCCAGCTCGACTTGCTGTA CCCTGGATTGTGCCTAGCGGACCTGACGCCGGAGACATACAAGATTGAAGAGAGGTGATTGGTGTTATTTGTGAAAGCTCCAATGGGAGGGGATTTTCAGATGTTCTGATATCTTTTCTCTTCAGATGTTCTGATCGTTTTCCTTTTGTTA ] [-] EMBL CB649861 [ CCTCGTCGCCCCCTCCCGCGGCGCCGGACACCCCGTCGCCGGACAAGGAGAAGGCGGCCCACCGCTCCACCGACGGCGTGGGCGGCGGCTGTTCGCCTCAGCGGGGTCCGCAGCGGCCGTGGAACCTCCGCACCCGCCGCTCCGCCACGGCCGCGCCGCGTCCGGAGGGATCGGACGACGCGGCCGATGCCGCGCCGGATCGAGCGCCATCGCCGCTGGCGGCGACCAAGAAGCGGGTGTTCTCCATCGTGCTGTCCAAGGAGGAGATCGGCCAGGACTTCAAGGCGATCCGCGGGACTCGCCCCCCGCGCCGGCCCAAGAAGCGCCCCCGCACCGTGCAACGCCAGCTCGACTTGCTGTA CCCTGGATTGTGCCTAGCGGACCTGACGCCGGAGACATACAAGATTGAAGAGAGGTGATTGGTGTTATTTGTGAAAGCTCCAATGGGAGGGGATTTTCAGATGTTCTGATATCTTTTCTCTTCAGATGTTCTGATCGTTTTCCTTTTGTTATGTGATCATGGGCTAACAAGGTTGCTTCAGAACCGTAATGTTCTGGACGGGTTAGGGGAAGTTTAGTTGGGAATCTCCTCTAATTATGTATTGGATGTGGTTGTTGAGGAGTTTAGGTTGTGGAAATTGATTATTGGGCTTGTAGGATTGTTAATTGTATAAAGTGTAATCATCTGTACATTGTACTATTAATCTATGAAGAATTTTCGTTATTACGAAAAAAAAGA] [+] EMBL BQ906737 [ CCATCGT CTGTCCAAGGAGGAGATCGGCCAGGACTTCAAGGCGATCCGCGGGACTCGCCCCCCGCGCCGGCCCAAGAAGCGCCCCCGCACCGTGCAACGCCAGCTCGACTTGCTGTACCCCTGGATTGTGCCTAGCGGACCTGACGCCGGAGACATACAAGATTGAAGAGAGGTGATTGGTGTTATTTGTGAAAGCTCCAATGGGAGGGGATTTTCAGATGTTCTGATATCTTTTCTCTTCAGATGTTCTGATCGTTTTCCTTTTGTTATGTGATCATGGGCTAACAAGGTTGCTTCAGAACCGTAATGTTCTGGACGGGTTAGGGGAAGTTTAGTTGGGAATCTCCTCTAATTATGTATTGGATGTGGTTGTTGAGGAGTTTAGGTTGTGGAAATTGATTATTGGGCTTGTAGGATTGTTAATTGTATAAAGTGTAATCATCTGTACATTGTACTATTAATCTATGAAGAATTTTCGTTATTACGAAAAA ] [+] EMBL BQ906734 [ CGCGGGACTCGCCCCCCGCGCCGGCCCAAGAAGCGCCCCCGCACCGTGCAACGCCAGCTCGACTTGCTGTA CCCTGGATTGTGCCTAGCGGACCTGACGCCGGAGACATACAAGATTGAAGAGAGGTGATTGGTGTTATTTGTGAAAGCTCCAATGGGAGGGGATTTTCAGATGTTCTGATATCTTTTCTCTTCAGATGTTCTGATCGTTTTCCTTTTGTTATGTGATCATGGGCTAACAAGGTTGCTTCAGAACCGTAATGTTCTGGACGGGTTAGGGGAAGTTTAGTTGGGAATCTCCTCTAATTATGTATTGGATGTGGTTGTTGAGGAGTTTAGGTTGTGGAAATTGATTATTGGGCTTGTAGGATTGTTAATTGTATAAAGTGTAATCATCTGTACATTGTACTATTAATCTATGAAGAATTTTCGTTATTACGAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||