cluster # 9820

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Oryza sativa
cluster # 9820 cluster # 9820 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9820#0 length = 991 sequences # 6
consensusID : consensus_9820#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 991
fasta sequence
                              [GGGAATAGCTTCGGCGCGCCGGGGCCGGTGCTGCTGGAGCTGTTCTGCTCGCAG-GGGTGCGGGGCGTCGCCGGAGGCGGACGCGGTGGCGGCGCGGATGGTGCACGAGGACCAGCAGCGGGCGGCGGCGGGCGAGGGAGGCGGCGGGGAGCGCGGCGTGGTGGTGCTGGGCTTCCACGTCGACTACTGGGACTACCGCGGGTGGAAGGACCCGTTCGCGTCCAGCGCGTGGACGGTGCGGCAGAAGGCGTACGTGGAGGCGCTCCGGCTCGACACTCTGTTCACGCCGCAGGCCGTCGTGCAGGGCCGCGCCCACTGCGTCGGCACCGAGCAGGACGCCCTCGCCCAGGCCGTCCGCGACACGCCCCGCTACCCCGCCCCCGCCATGAAGGTGACGTTCCAGCGGCCGAACCCGAGCACGCTGCAGGCGTCGTTCACGGGGACGCTGCGGAGCCGGATGGAGGGCGGCGGGAG-CGTGCTGGTGGCGCTGTACGAGAGCGGGCTGGTCACGGACTGCGGGCGCGGCGAGAACAAGGGGAAGTCGCTGCTCAACGACCAC-GTGGTGCGGCGGCTGGAGAAGGTGGCCGCCGTGCGCGAC-GGCGCGTCGGCGAAGAAGTCCGTGTCCGGGTCCGTGCAGTTCCCGCTCTGGGACGGCTTCCGCGCCTCCCGCTGCGGCCTCGTCCTCTTCGTCCAGAAC-GCCGCGCTGCAGGTGCTCGGCGTCCAGCACTTCGACCTGCCCGACAACGTGTGACTACTCGCGGTCGGTCGGTCGAGGCTTGCGCCTGCGTGTGTAGACGTGTGCCGTGTAATGTACTACTAGTAAATATTCTTTGTAGAGTACACGTTTGATTATTGATCGACGCGTTTGTATTGTTGTTGATTTGTTGGGGGTACGAGACTAGACGAGAGTGGGGAG-AT---GGGTAATTGGAGACATTATT-ATTCAGACATTGCAGCAGCCTTGCAGCCTCGT-CCGAT-T-TGCCTCGGGCCATATT]

[+] EMBL BU673490             [GGGAATAGCTTCGGCTCGCCGGGGCCGGTGCTGCTGGAGCTGTTCTGCTCGCAG GGGTGCGGGGCGTCGCCGGAGGCGGACGCGGTGGCGGCGCGGAT GTGCACGAGGACCAGCAGCGGGCGGCGGCGGGCGAGGGAGGCGGCGGGGAGCGCGGCGTGGTGGTGCTGGGCTTCCACGTCGACTACTGGGACTACCGCGGGTGGAAGGACCCGTTCGCGTCCAGCGCGTGGACGGTGCGGCAGAAGGCGTACGTGGAGGCGCTCCGGCTCGACACTCTGTTCACGCCGCAGGCCGTCGTGCAGGGCCGCGCCCACTGCGTCGGCACCGAGCAGGACGCCCTCGCCCAGGCCGTCCGCGACACGCCCCGCTACCCCGCCCCCGCCATGAAGGTGACGTTCCAGCGGCCGAACCCGAGCACGCTGCAGGCGTCGTTCACGGGGACGCTGCGGAGCCGGATGGAGGGCGGCGGGAGCCGTGCTGGTGGCGCTGTACGAGAGCGGGCTGGTCACGGACTGCGGGCGCGGCGAGAACAAGGGGAAGTCGCTGCTCAACGACCAC GTGGTGCGGCGGCTGGAGAAGGTGGCCGCCGTGCGCGAC GGCGCGTCGGCGAAGAAGTCCGTGTCCGGGTCCGTGCAGTTCGCGCTCTGGGACGGCTTCCGCGCCTCCCGCTGCGGCCTC                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BU672931             [ GGAATAGCTTGCGCGCGCCGGGGCCGGTGCTGCTGGAGCTGTTCTGCTCGCAGTGGGTGCGGGGCGTCGCCGGAGGCGGACGCGGTGGCGGCGCGGATGGTGCACGAGGACCAGCAGCGGGCGGCGGCGGGCGAGGGAGGCGGCGGGGAGCGCGGCGTGGTGGTGCTGGGCTTCCACGTCGACTACTGGGACTACCGCGGGTGGAAGGACCCGTTCGCGTCCAGCGCGTGGACGGTGCGGCAGAAGGCGTACGTGGAGGCGCTCCGGCTCGACACTCTGTTCACGCCGCAGGCCGTCGTGCAGGGCCGCGCCCACTGCGTCGGCACCGAGCAGGACGCCCTCGCCCAGGCCGTCCGCGACACGCCCCGCTACCCCGCCCCCGCCATGAAGGTGACGTTCCAGCGGCCGAACCCGAGCACGCTGCAGGCGTCGTTCACGGGGACGCTGCGGAGCCGGATGGAGGGCGGCGGGAGCCGTGCTGGTGGCGCTGTACGAGAGCGGGCTGGTCACGGACTGCGGGCGCGGCGAGAACAAGGGGAAGTCGCTGCTCAACGACCAC GTGGTGCGGCGGCTGGAGAAGGTGGCCGCCGTGCGCGACGGGCGCGTCGGCGAAGAAGTCCGTGTCCGGGGTCGTGCAGTTCCCGCTCTGGGACGGCTTCCGCGCCTCCCGCTGCGGACTCGTCCTCTTCGTCCAGAACGGCCGGGCTG AGGTG                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB964772             [  GAAT TCTGCGGCGCGCCGGGGCCGGTGCTGCTGGAGCTGTTCTGCTCGCAGTGGGTGCGGGGCGTCGCCGGAGGCGGACGCGGTGGCGGCGCGGATGGTGCACGAGGACCAGCAGCGGGCGGCGGCGGGCGAGGGAGGCGGCGGGGAGCGCGGCGTGGTGGTGCTGGGCTTCCACGTCGACTACTGGGACTACCGCGGGTGGAAGGACCCGTTCGCGTCCAGCGCGTGGACGGTGCGGCAGAAGGCGTACGTGGAGGCGCTCCGGCTCGACACTCTGTTCACGCCGCAGGCCGTCGTGCAGGGCCGCGCCCACTGCGTCGGCACCGAGCAGGACGCCCTCGCCCAGGCCGTCCGCGACACGCCCCGCTACCCCGCCCCCGCCATGAAGGTGACGTTCCAGCGGCCGAACCCGAGCACGCTGCAGGCGTCGTTCACGGGGACGCTGCGGAGCCGGATGGAGGGCGGCGGGAG CGTGCTGGTGGCGCTGTACGAGAGCGGGCTGGTCACGGACTGCGGGCGCGGCGAGAACAAGGGGAAGTCGCTGCTCAACGACCACNGTGGTGCGGCGGCTGGAGAAGGTGGCCGCCGTGCGCGAC GGCGCGTCGGCGAAGAAGTCCGTGTCCGGGTCCGTGCAGTTCCCGCTCTGGGACGGCTTCCGCGCCTCCCGCTGCGGCCTCGTCCTCTTCGTCCAGAAC GCCGCGCTGCAGGTGCTCGGCGTCCAGCACTTCGACCTGGCCGACAACGTGTGACTACTCGCGGTCGGTCGGTCGAGGGTTGCGCCTGCGTTTGTAGACGTGTTGCGTG                                                                                                                                                                                                  ]
[+] EMBL CB967386             [  GAATAGCTTCGGCGC CCGGGG CGGTGCTGCTGGAGCTG CCTGCTCGCAG GGGTGCGGGGCGTCGCCGGAGGCGGACGCGGTGGCGGCGCGGATTGTGC CGAGGACCAGCAGCGGGCGGCGGCGGGCGAGGGAGGCGGCGGGGAGCGCGGCGTGGTGGTGCTGGGCTTCCACGTCGACTACTGGGACTACCGCGGGTGGAAGGACCCGTTCGCGTNCAGCGCGTGGACGGTGCGGCAGAAGGCGTACGTGGAGGCGCTCCGGCTCGACACTCTGTTCACGCCGCAGGCCGTCGTGCAGGGCCGCGCCCACTGCGTCGGCACCGAGCAGGACGCCCTCGCCCAGGCCGTCCGCGACACGCCCCGCTACCCCGCCCCCGCCATGAAGGTGACGTTCCAGCGGCCGAACCCGAGCACGCTGCAGGCGTCGTTCACGGGGACGCTGCGGAGCCGGATGGAGGGCGGCGGGAG CGTGCTGGTGGCGCTGTACGAGAGCGGGCTGGTCACGGACTGCGGGCGCGGCGAGAACCAGGGGAAGTCGCTGCTCAACGACCAC GTGGTGCGGCGGCTGGAGAAGGTGGCCGCCGTGCGCGAC GGCGCGTCGGCGAAGAAGTCCGTGGTCGGGTCCGTGCAGTTCCCGCTCTGGGACTGCTTTCGCGCCTCCCGCTGCGGGCTCGTCCTCTTCGTCCAGAAC GCCGCGCTTCAGG                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BU673850             [                                                                                                                                                                                                                                                                                                                                                                              CCGCTACCCCGCCCCCGCCATGAAGTTGACGTTCCAGCGTCCGAACCCGAGCACGCTGCAGGCGTCGTTCACGGGGACTCTGCGGAGCCGGATGGAGGTCGTCGGGAG CGTGCTGGTGGCGCTGTACGAGAGCGGGCTGGTCACGGACTGCGGGCGCGGCGAGTACAAGGGGAAGTCGCTGCTCTACGACCAC GTGGTGCGTCGGCTGGAGAAGGTGGCCGCCGTGCGCGAC GGCGCGTCGGCGAAGAAGTCCGTGTCCGGGTCCGTGCAGTTCCCGCTCTGGGACGGCTTCCGCGCCTCCCGCTGCGGCCTCGTCCTCTTCGTCCAGAAC GCCGCGCTGCAGGTGCTCGGCGTCCAGCACTTCGACCTGCCCGACAACGTGTGACTACTCGCGGTCGGTCGGTCGAGGCTTGCGCCTGCGTGTGTAGACGTGTGCCGTGTAATGTACTACTAGTAAATATTCTTTGTAGAGTACACGTTTGATTATTGATCGACGCGTTTGTATTGTTGTTGATTTGTTGGGGGTACGAGACTAGACGAGAGTGGGGAG AT   GGGTAATTGGAGACATTATTAATTCAGACATTGCAGCAGCCTTGCAGCCTCGT CCGATGTCTGCCTCGGGCCATATT]
[-] EMBL BU673853             [                                                                                                                                                                                                                                                                                                                                                                                                                                              TCGTTCACGGGGACGCTGCGGAGCCGGATGGAGGGCGGCGGGAG CGTGCTGGTGGCGCTGTACGAGAGCGGGCTGGTCACGGACTGCGGGCGCGGCGAGAACAAGGGGAAGTCGCTGCTCAACGACCAC GTGGTGCGGCGGCTGGAGAAGGTGTCCGCCGTGCGCGAC GGCGCGTCGGCGAAGAAGTCCGTGTCCGGGTCCGTGCAGTTCCCGCTCTGGGACGGCTTCCGCGCCTCCCGCTGCGGCCTCGTCCTCTTCGTCCAGTAC GCCGCGCTGCAGGTGCTCGGCGTCCAGCACTTCGACCTGCCCGACCACGTGTGACTACTCGCGGTCGGTCGGTCGAGGCTTGCGCCTGCGTGTGTAGACGTGTGCCGTGTAATGTACTACTAGTAAATATTCTTTGTAGAGTACACGTTTGATTATTGATCGACGCGTTTGTATTGTTGTTGATTTGTTGGGGGTACGAGACTAGACGAGAGTGGGGAGCATAGCGGGTAATTGGAGACATTATT ATTCAGACATTGCAGCAGCCTTGCAGCCTCGTGCCGAT T AGCCTCGGG       ]




>consensus_9820#0
GGGAATAGCTTCGGCGCGCCGGGGCCGGTGCTGCTGGAGCTGTTCTGCTCGCAGGGGTGC
GGGGCGTCGCCGGAGGCGGACGCGGTGGCGGCGCGGATGGTGCACGAGGACCAGCAGCGG
GCGGCGGCGGGCGAGGGAGGCGGCGGGGAGCGCGGCGTGGTGGTGCTGGGCTTCCACGTC
GACTACTGGGACTACCGCGGGTGGAAGGACCCGTTCGCGTCCAGCGCGTGGACGGTGCGG
CAGAAGGCGTACGTGGAGGCGCTCCGGCTCGACACTCTGTTCACGCCGCAGGCCGTCGTG
CAGGGCCGCGCCCACTGCGTCGGCACCGAGCAGGACGCCCTCGCCCAGGCCGTCCGCGAC
ACGCCCCGCTACCCCGCCCCCGCCATGAAGGTGACGTTCCAGCGGCCGAACCCGAGCACG
CTGCAGGCGTCGTTCACGGGGACGCTGCGGAGCCGGATGGAGGGCGGCGGGAGCGTGCTG
GTGGCGCTGTACGAGAGCGGGCTGGTCACGGACTGCGGGCGCGGCGAGAACAAGGGGAAG
TCGCTGCTCAACGACCACGTGGTGCGGCGGCTGGAGAAGGTGGCCGCCGTGCGCGACGGC
GCGTCGGCGAAGAAGTCCGTGTCCGGGTCCGTGCAGTTCCCGCTCTGGGACGGCTTCCGC
GCCTCCCGCTGCGGCCTCGTCCTCTTCGTCCAGAACGCCGCGCTGCAGGTGCTCGGCGTC
CAGCACTTCGACCTGCCCGACAACGTGTGACTACTCGCGGTCGGTCGGTCGAGGCTTGCG
CCTGCGTGTGTAGACGTGTGCCGTGTAATGTACTACTAGTAAATATTCTTTGTAGAGTAC
ACGTTTGATTATTGATCGACGCGTTTGTATTGTTGTTGATTTGTTGGGGGTACGAGACTA
GACGAGAGTGGGGAGATGGGTAATTGGAGACATTATTATTCAGACATTGCAGCAGCCTTG
CAGCCTCGTCCGATTTGCCTCGGGCCATATT
clustalw multiple alignements is not computed in this case