These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9826#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1477 fasta sequence [AAAGCGCCAATAACTTGAGTTCCCGTGCAAGTGAAGCTTCAGGTGCTGTGACTGCTAGTTCAGTAATGGGTGTCACTACCACTCCAACTGCTCAGTTAGTTTCAAATAAAGGACCTCTGACAATTCAAGCAACCCATAATGAGAGGTCAGTTCCAGTTGCACGACATCCGCAGGTGCCTACGGTCTCCAAATCTGAAGCTCAGAAGCAGACTTCCCTGGTAAGCAGTGGTACAGCAACCCAGGCAATTACAGTATCGAGGCCCTTGAGTGCTCCACAAGTCCCTGCAGCAAAACAAACAGCACCTGTGGCTTCAGCAGTTC-AAAC-TGTACCACTTCTTT-CCCATTCGATGAGTGCAG-TTGGACGTCTAGGCAATGAACCCTCTGCTAGTGCTCCAAGCTACATTCCTCGTTCATACCGGAATGCCATGATGGAGAGAAGTTCTGTTGGTGCTAGCAGTTTCACTCATCAGACAAGCTCAGAGCAAAGAGTTGCACAGTCGCAATCGATGTTTTCATTGTCACCCTCCATTCTATCACCAGAGCACCTGATTGGGAATGACAGATCATCGTTGCGACAAGGGTTGACGTTTGGAACTGTCAAGCCTGAGACACTCAACCAGTGGAGAGAAGAGAGCTCTCAGCAGGCAAGCAGCAGCAGCAGTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGTTTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTCCATTTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACTTGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGGCATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGGCATGTTTGCTCAATCTGATCCATACCTGTTTGATCAACCTGAGCAATACTATGACGAGGAAATCCCAAGGTTCTATAATTCTTTGAACGGTACTTCTCGGGGGCTAAGGGAGAGGAGTTATTCGCA-TTTTGATCTGCCTTCATACTCCAACGGCCAGTTTGATGATATGATGATGAACCAGTGGCCATACGGCCAAACAGACCTCTCCTTGCCAAATTTTGGGGCAGATATGAATGGTTACCCATATCAGTCAAGTGATTATCCGAATTCCGCAAATGGGTTAAGCAGGTACCCACCCTATCGACCTGCCAATGGGCATTGAGCACCTCTAAT-GATT-AGTGATTGCAATTCACAATAAT-GTGTTGTAATCTCAT-GCTGTTTTCTTCTGAGC-TGAGTGTAATTGTAATCCTT-CCCTATAGTTTTA-TAAAGAAC-GGCTCCTCAGTTCCTTATTCAATAGCTATATTTCTTTGCTTTCTACATTGTTTTTTATCGCGTGGTAAAGAATCTAAAATCAGTCGTATACAT] [+] EMBL C26064 [AAAGCGCCAATAACTTGAGTTCCCGTGCAAGTGAAGCTTCAGGTGCTGTGACTGCTAGTTCAGTAATGGGTGTCACTACCACTCCAACTGCTCAGTTAGTTTCAAATAAAGGACCTCTGACAATTCAAGCAACCCATAATGAGAGGTCAGTTCCAGTTGCACGACATCCGCAGGTGCCTACGGTCTCCAAATCTGAAGCTCAGAAGCAGACTTCCCTGGTAAGCAGTGGTACAGCAACCCAGGCAATTACAGTATCGAGGCCCTTGAGTGCTCCACAAGTCCCTGCAGCAAAACAAACAGCACCTGTGGCTTCAGCAGTTCAAAACTTGTACCACTTCTTTNCCCATTCGATGAGTGCAGTTTGGACGTCTAGGCAATGAACCCTNTGCTAGTGCTCC ] [+] EMBL CB642272 [ AGCAACCCATAATGAGAGGTCAGTTCCAGTTGCACGACATCCGCAGGTGCCTACGGTCTCCAAATCTGAAGCTCAGAAGCAGACTTCCCTGGTAAGCAGTGGTACAGCAACCCAGGCAATTACAGTATCGAGGCCCTTGAGTGCTCCACAAGTCCCTGCAGCAAAACAAACAGCACCTGTGGCTTCAGCAGTTC AAAC TGTACCACTTCTTT CCCATTCGATGAGTGCAG TTGGACGTCTAGGCAATGAACCCTCTGCTAGTGCTCCAAGCTACATTCCTCGTTCATACCGGAATGCCATGATGGAGAGAAGTTCTGTTGGTGCTAGCAGTTTCACTCATCAGACAAGCTCAGAGCAAAGAGTTGCACAGTCGCAATCGATGTTTTCATTGTCACCCTCCATTCTATCACCAGAGCACCTGATTGGGAATGACAGATCATCGTTGCGACAAGGGTTGACGTTTGGAACTGTCAAGCCTGAGACACTCAACCAGTGGAGAGAAGAGAGCTCTCAGCAGGCAAGCAGCAGCAGCAGTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGTTTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTCCATTTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACTTGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGGCATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGG ] [+] EMBL AK059486 [ GTGCAG TTGGACGTCTAGGCAATGAACCCTCTGCTAGTGCTCCAAGCTACATTCCTCGTTCATACCGGAATGCCATGATGGAGAGAAGTTCTGTTGGTGCTAGCAGTTTCACTCATCAGACAAGCTCAGAGCAAAGAGTTGCACAGTCGCAATCGATGTTTTCATTGTCACCCTCCATTCTATCACCAGAGCACCTGATTGGGAATGACAGATCATCGTTGCGACAAGGGTTGACGTTTGGAACTGTCAAGCCTGAGACACTCAACCAGTGGAGAGAAGAGAGCTCTCAGCAGGCAAGCAGCAGCAGCAGTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGTTTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTCCATTTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACTTGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGGCATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGGCATGTTTGCTCAATCTGATCCATACCTGTTTGATCAACCTGAGCAATACTATGACGAGGAAATCCCAAGGTTCTATAATTCTTTGAACGGTACTTCTCGGGGGCTAAGGGAGAGGAGTTATTCGCA TTTTGATCTGCCTTCATACTCCAACGGCCAGTTTGATGATATGATGATGAACCAGTGGCCATACGGCCAAACAGACCTCTCCTTGCCAAATTTTGGGGCAGATATGAATGGTTACCCATATCAGTCAAGTGATTATCCGAATTCCGCAAATGGGTTAAGCAGGTACCCACCCTATCGACCTGCCAATGGGCATTGAGCACCTCTAAT GATT AGTGATTGCAATTCACAATAAT GTGTTGTAATCTCAT GCTGTTTTCTTCTGAGC TGAGTGTAATTGTAATCCTT CCCTATAGTTTTA TAAAGAAC GGCTCCTCAG ] [-] EMBL CA752893 [ CGTCTAGGCAATGAACCCTCTGCTAGTGCTCCAAGCTACATTCCTCGTTCATACCGGAATGCCATGATGGAGAGAAGTTCTGTTGGTGCTAGCAGTTTCACTCATCAGACAAGCTCAGAGCAAAGAGTTGCACAGTCGCAATCGATGTTTTCATTGTCACCCTCCATTCTATCACCAGAGCACCTGGCTGGGAATGACAGATCATCGTTGCGACAAGGGTTGACGTTTGGAACTGTCAAGCCTGAGACACTCAACCAGTGGAGAGAAGAGAGCTCTCAGCAGGCAAGCAGCAGCAGCAGTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGTTTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTCCATTTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACTTGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGGCATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGGCATGTTTGCTCAATCTGATCCATACCTGTTTGATCAACCTGAGCAATACTATGACGAGGAAATCCCAAGGTTCTATAATTCTT ] [+] EMBL CA765576 [ GAGCTCTCAGCAGGCAAGCAGCAGCAGCAGTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGTTTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTCCA TTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACTTGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGGCATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGGCATGTTTGCTCAATCTGATCCATACCTGTTTGATCAACCTGAGCAATACTATGACGAGGAAATCCCAAGGTTCTATAATTCTTTGAACGGTACTTCTCGGGGGCTAAGGGAGAGGAGTTATTCGCATTTTTGATCTGCCTTCATACTCCAACGGCCAGTTTGATGATATGATGATGAACCAGTGGCCATACGGCCAAACAGACCTCTCCTTGCCAAATTTTGGGGCAGATATGAATGGTTACCCATATCAGTCAAGTGATTATCCGAATTCCGCAAATGGGTTAAGCAGGTACCCACCCTATCGACCTGCCAATGGGCATTGAGCACCTCTNATGGATTAAGTGATTGCAATT ACAATAATGGGGNTGNAATCTCATGGCTGGTTTCTTCTGNGCTTGAGNGNAATTGGAATCCTTNCCTTATAGNTTTATTAAANAACNGGTTCCTCAGTTCCT ] [-] EMBL CB642273 [ AGTAGCAGCAGCAATGATCATGGGGCAGTAAGCTCAAGCAATGGAGGTGAGTTTGAGAAGTTTTATTTGTTTGGAAAGCCACGGAGCAAGCAACTGTCAGAAATTTCTGCCAGATCTACTCCATTTCAACCACAAGGCCTGGTCAGTGATGAGTTTCCGCACCTAGACATAATCAATGACTTGCTAAATGACGAACAGTGTGAAAGGCGAACATTAAAGGTTCTTCAGCGGAGCCAACAGGCATTTGCTCGACAATACTCGATGCCCAATAATTCCAGCACACCTGATTATGGCATGTTTGCTCAATCTGATCCATACCTGTTTGATCAACCTGAGCAATACTATGACGAGGAAATCCCAAGGTTCTATAATTCTTTGAACGGTACTTCTCGGGGGCTAAGGGAGAGGAGTTATTCGCA TTTTGATCTGCCTTCATACTCCAACGGCCAGTTTGATGATATGATGATGAACCAGTGGCCATACGGCCAAACAGACCTCTCCTTGCCAAATTTTGGGGCAGATATGAATGGTTACCCATATCAGTCAAGTGATTATCCGAATTCCGCAAATGGGTTAAGCAGGTACCCACCCTATCGACCTGCCAATGGGCATTGAGCACCTCTAAT GATT AGTGATTGCAATTCACAATAAT GTGTTGTAATCTCAT GCTGTTTTCTTCTGAGC TGAGTGTAATTGTAATCCTT CCCTATAGTTTTA TAAAGAAC GGCTCCTCAGTTCCTTATTCAATAGCTATATTTCTTTGCTTTCTACATTGTTTTTTATCGCGTGGTAAAGAATCTAAAATCAGTCGTATACAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||