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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9828#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1009 fasta sequence
[TAAAATGGACCACCTTCAAGTCTTGAAGCTCCCTTCCATGGGAAAGTTCAATGCATGGTTTTTTCACTGCAATCGAAATTTTGTAAGGGAATGTGTGGGCCCTGCAAAGGAAAGCTACGAGCGCACAATGTCAAACATGCTTGTCAAGTCTCATGCTCTTTTTATCAAGGAGTACAATAACGATCTCTTCAATTGGTTGGTAACCTTCTCCCTACTCATGGAGGTTATTGGGCGCTTTGTCATCAAGTTCTTTTTACTTGAGATTGTTGCCTGGGTGATGTTCATCTTCCTGGAGACGTACACGAGGATGTTCTGGTCAGCAGAGTCATTGTACTATAATCCAGCTTGGCACATCATTGTCTCTTCGTGGGAAACTATCGTATATAGCCCCATTCTCGATCTGGACAGATGGGCGATCCCCATTGCCGTATTATTGTCTTTTTGGCTTCTTTACTGGCGATGTTTCGGTAGAAGAAAACGGGGCAGCCGATCGTCACTCCTGCCACTCCACAACAAGATCTCCCACAAGAACTCAACGCGCCCGAGATCAGA-CTAATCTGATGCTCTTTTTTCCCTGAAAGGACAGTACAAAGTATCAAACTTGTAGAAGCAGAAGATAGCTGTGAATCATCTGTCTTGTCTTCCATGCCGCGTTGGAGTGGATTGGATTGGATGGGCCTTCTTTTGGTGGTTCCCTGCCAATGTATCACT-GATTCGTTTCTTGGC-CGCGGAAGACGATG-AAGTCGCTGCCATTTGAGCGCGTGCG-CAAGCGTTGTTGTGGTTGGTATACGGAGTTTTATGCATTTTTGTGTAGCTAGGCTGCCCTTACGGGATGCGATCTCATTCATTGATTATTGTTCACACCCCACCGGTGGATCTTATATAAGGCTTCCTTTTTTTTTCTCTAAACGAAAAATTTACCATTAATAACTACACTTGCTTGTATGATGAACTGTGATGGGATTATGGGTGAAAATGCATCAACTAATTTGATTATGAAAAAAAAAGA]
[+] EMBL CB668871 [TAAAATGGACCACCTTCAAGTCTTGAAGCTCCCTTCCATGGGAAAGTTCAATGCATGGTTTTTTCACTGCAATCGAAATTTTGTAAGGGAATGTGTGGGCCCTGCAAAGGAAAGCTACGAGCGCACAATGTCAAACATGCTTGTCAAGTCTCATGCTCTTTTTATCAAGGAGTACAATAACGATCTCTTCAATTGGTTGGTAACCTTCTCCCTACTCATGGAGGATATTGGGCGCTTTGTCATCAAGCTCTTTTTACTTGATATTGTTGCCTGGGTGATGTTCATCTTCCTGGAGACATACACGAGGATGTTCTGGTCATCAAAGTCATTGTACTATAATCCAACTTGGCACATCATTGTCTCTTCGT ]
[+] EMBL CA757602 [ GGTTTTTTCACTGCAATCGAAGTTTTGTAAGGGAATGTGTGGGCCCTGCAAAGGAAAGCTACGAGCGCAGAATGTCAAAGATGCTTGTCAAGTCTCGTGCTCTTTTTATCAAGGAGTACAATAACAAGCTCTTCAATTGGTTGGTAACCTTCTCCCTAGTCATGGTGGTTATTGGGCGCTTTGTCATCAAGTTCTTTTTACTTGAGATTGTTGCCTGGGTGATGTTCATCTTCCTGGAGACGTACACGAGGATGTTCTGGTCAGCAGAGTCATTGTACTATAATCCAGCTTGGCACATCATTGTCTCTTCGTGGGAAACTATCGTATATAGCCCCATTCTCGATCTGGACAGATGGGCGATCCCCATTGCCGTATTATTGTCTTTTTGGCTTCTTTACTGGCGATGTTTCGGTAGAAGAAAACGGGGCAGCCGATCGTCACTCCTGCCACTCCACAACAAGATCTCCCACAAGAACTCAACGCGCCCGAGATCAGA CTAATCTGATGCTCTTTTTTCCCTGAAAGGACAGTACAAAGTATCAAACTTGTAGAAGCAGAAGATAGCTGTGAACCATCTGTCTTGTCTTCCATGCCGCGTTGGAGTGAGTTGGATTGGATGGGCCTTCTTTTGGGGGTTCCCTGCCAATGTATCACTGGATTCG TTCATGGCAGGCGGAAGACGATGAAAATGCCTGCATTTTGAGCGCGTGCGCCAAGCTTTGTTG GGGTGGTATCCGGGGGTTTATGCATTTTTGTCTAGCTAGGCTGCCTTTAAGGGGAGCGCACCCATTCnt ]
[-] EMBL CB668872 [ GGTTATTGGGCGCTTTGTCATCAAGTTCTTTTTACTTGAGATTGTTGCCTGGGTGATGTTCATCTTCCTGGAGACGTACACGAGGATGTTCTGGTCAGCAGAGTCATTGTACTATAATCCAGCTTGGCACATCATTGTCTCTTCGTGGGAAACTATCGTATATAGCCCCATTCTCGATCTGGACAGATGGGCGATCCCCATTGCCGTATTATTGTCTTTTTGGCTTCTTTACTGGCGATGTTTCGGTAGAAGAAAACGGGGCAGCCGATCGTCACTCCTGCCACTCCACAACAAGATCTCCCACAAGAACTCAACGCGCCCGAGATCAGA CTAATCTGATGCTCTTTTTTCCCTGAAAGGACAGTACAAAGTATCAAACTTGTAGAAGCAGAAGATAGCTGTGAATCATCTGTCTTGTCTTCCATGCCGCGTTGGAGTGGATTGGATTGGATGGGCCTTCTTTTGGTGGTTCCCTGCCAATGTATCACT GATTCGTTTCTTGGC CGCGGAAGACGATG AAGTCGCTGCCATTTGAGCGCGTGCG CAAGCGTTGTTGTGGTTGGTATACGGAGTTTTATGCATTTTTGTGTAGCTAGGCTGCCCTTACGGGATGCGATCTCATTCATTGATTATTGTTCACACCCCACCGGTGGATCTTATATAAGGCTTCCTGTTTTTTTCTCTAAACGAAAAATTTACCATTAATAACTACACTTGCTTGTATGATGAACTGTGATGGGATTAGGGGTGAAAATGCATCAACTAATTTGATTATGAAAAAAAAAGA]
[-] EMBL CB662942 [ TCTTTTTACTTGAGATTGTTGCCTGGGTGATGTTCATCTTCCTGGAGACGTACACGAGGATGTTCTGGTCAGCAGAGTCATTGTACTATAATCCAGCTTGGCACATCATTGTCTCTTCGTGGGAAACTATCGTATATAGCCCCATTCTCGATTTGGACAGATGGGCGATCCCCATTGCCGTATTATTGTCTTTTTGGCTTCTTTACTGGCGATGTTTCGGTAGAAGAAAACGGGGCAGCCGATTGTCACTCCTGCCACTCCACAACAAGATTTCCCACAAGAACTCAACGCGCCCGAGATCAGA CTAATTTGATGCTCTTTTTTCCCTGAAAGGACAGTACAAAGTATCAAACTTGTAGAAGCAGAAGATAGCTGTGAATCATCTGTTTTGTCTTCCATGCCGCGTTGGAGTGGATTGGATTGGATGGGCCTTCTTTTGGTGGTTCCCTGCCAATGTATCACT GATTCGTTTTTTGGC CGCGGAAGACGATG AAGTCGCTGCCATTTGAGCGCGTGCG CAAGCGTTGTTGTGGTTGGTATACGGAGTTTTATGCATTTTTGTGTAGCTAGGCTGCCCTTACGGGATGCGATTTCATTCATTGATTATTGTTCACCCCCCCCCGGTGGATCTTATATAAGGCTTCCTTTTTTTTTCTTTAAACGAAAAATTTACCATTAATAACTACACTTGCTTGTATGATGAACTGTGATGGGATTCTGGGTGAAAATGCATCAACTAAT ]
[-] EMBL CB641559 [ TGTACTATAATCCAGCTTGGCACATCATTGTCTCTTCGTGGGAAACTATCGTATATAGCCCCATTCTCGATCTGGACAGATGGGCGATCCCCATTGCCGTATTATTGTCTTTTTGGCTTCTTTACTGGCGATGTTTCGGTAGAAGAAAACGGGGCAGCCGATTGTCACTCCTGCCACTCCACAACAAGATCTCCCACAAGAACTCAACGCGCCCGAGATCAGA GTAATTTGATGCTCTTTTTTCCCTGAAAGGGCAGTTCAAAGTATCAAACTTGTAGAAGCAGAAGATAGCTGCGAATCATCTGTCTTGTCTTCCATCCCGCGTTGGAGTGGATTGGATTGGATGGGCCTTCTTTTGGTGGTTCCCTGCCAAAGTATCACT GATTCGTTTCTTGGC CGCGGAAGACGATG AAGTCGCTCCCATTTGAGCGCGTGCG CAAGCGTTGTTGTGGTTGGTATACGGAGTTTTATGCATTTTTGTGTAGTTAGGCTGCCCTTACGGGATGCGATCTCATTCATTGATTATTGTTCACCCCCCCCCGGTGGATTTTATATAAGGCTTCCTTTTTTTTTCTCTAAACGAAAAATTTACCATTAATAACTACACTTGCTTGTATGATGAACTGTGATGGGATTTTGGGTGAAAATGCATCAACTAATT ]
[-] EMBL C26764 [ gtACCCCTGCCACCCCACAACAAGATCTCCCACAAGAACTCAACGCGCCCGAGATCAGACCTAATCTGATGCTCTTTTTTCCCTGAAAGGACAGTACAAAGTATCAAACTTGTAGAAGCAGAAGATAGCTGTGAATCATCTGTCTTGTCTTCCATGCCGCGTTGGAGTGGATTGGATTGGATGGGCCTTCTTTTGGTGGTTCCCTGCCAATGTATCACT GATTCGTTTCTTGGC CGCGGAAGACGATG AAGTCGCTGCCATTTGAGCGCGTGCG CAAGCGTTGTTGTGGTTGGTATACGGAGTTTTATGCATTTTTGTGTAGCTAGGCTG CCTTACGGGATGCGATCTCATTCATTGATTATTGTTCACACCCCACCGGTGGATCTTATATAAGGCTTCC ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||