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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9830 cluster # 9830       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9830#0 length = 573 sequences # 6  

consensusID : consensus_9830#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 573
fasta sequence
                              [TTTTTTTAGAAATCAAGAAGAGGAAATTTACATTGATTCAATTATCCGTCAACGTCATCAACAACAGCAGAACCAAATCACGGATCAAAATTCTTCTGCCATATTAGACATTCAACAAAATAACAGGAGAACCAAACTGACTCACCGCCAACACCATCATCAATCTCCCTCTCAGCCGTGGTCACCTTCGATCCACACCTACCATGCGGCCATCAAGGAGAA-GGGGGA-GGCCGCCGCTGCTCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCGCCGCCACTGCTGCGCTGTGGATCGGGCGGCCTTTGGCTTCAAGGCGGTTGGATCCAGTGTCCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATCGGGGCGGCGAGCTGAGAGGAATGACGAGTGGCGATGAGGACGAGGAAAGAGGATGAAGGAACGATGCTCCTTTTTAATTTTTTTCTACTCCTTCAG]

[+] EMBL CF300428             [TTTTTTTAGAAATCAAGAAGAGGAAATTTACATTGATTCAATTATCCGTCAACGTCATCAACAACAGCAGAACCAAATCACGGATCAAAATTCTTCTGCCATATTAGACATTCAACAAAATAACAGGAGAACCAAACTGACTCACCGCCAACACCATCATCAATCTCCCTCTCAGCCGTGGCCACCTTCGATCCACACCTACCATGCGGCCATCAAGGAGAAGGGGGGA GGCCGCCGCTGCTCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCGCCGCCACTGCTGCGCTGTGGATCGGGCGGCCTTTGGCTTCAAGGCGGTTGGATCCAGTGTCCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATCGGGGCGGCGAGCTGAGAGGAATGACGAGTGGCGATGAGGACGAGGAAAGAGGATGAAGGA                                    ]
[-] EMBL C98129               [       tttAATCAAGAAGAGGAAATTTACATTGATTCAATTATCCGTCAACGTCATCAACAACAGCAGAACCAAATCACGGATCAAAATTCTTCTGCCATATTAGACATTCAACAAAATAACAGGAGAACCAAACTGACTCACCGCCAACACCATCATCAATCTCCCTCTCAGCCGTGGTCACCTTCGATCCACACCTACCATGCGGCCATCAAGGAGAA GGGGGA GGCCGCCGCTGCTCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCGCCGCCACTGCTGCGCTGTGGATCGGGCGGCCTTTGGCTTCAAGGCGGTTGGATCCAGTGTCCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAAT                                                                                                 ]
[-] EMBL AK062987             [                       AAATTTACATTGATTCAATTATCCGTCAACGTCATCAACAACAGCAGAACCAAATCACGGATCAAAATTCTTCTGCCATATTAGACATTCAACAAAATAACAGGAGAACCAAACTGACTCACCGCCAACACCATCATCAATCTCCCTCTCAGCCGTGGTCACCTTCGATCCACACCTACCATGCGGCCATCAAGGAGAA GGGGGA GGCCGCCGCTGCTCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCGCCGCCACTGCTGCGCTGTGGATCGGGCGGCCTTTGGCTTCAAGGCGGTTGGATCCAGTGTCCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATCGGGGCGGCGAGCTGAGAGGAATGACGAGTGGCGATGAGGACGAGGAAAGAGGATGAAGGAACGATGCTCCTTT                       ]
[-] EMBL C27636               [                                                                                                                                                                                               TCAANACCTACCATGCGGCCATCAAGGAGAA GGGGGAGGGCCGCCGCTGCTCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCGCCGCAACT NTGCGCTGTGGATCGGGC GCCTTTGGCTTCAAGGCGGTTGGATCCAGTGTCCGGC GCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATCGGGGCGGCGAGCTGAGAGGAATGAC                                                                       ]
[-] EMBL CF300429             [                                                                                                                                                                                                                  CATCAAGGAGAA GGGGGA GGCCGCCGCTGCTCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCGCCGCCACTGCTGCGCTGTGGATCGGGCGGCCTTTGGCTTCAAGGCGGTTGGATCCAGTGTCCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATCGGGGCGGCGAGCTGAGAGGAATGACGAGTGGCGATGAGGACGAGGAAAGAGGATGAAGGAACGATGCCCCTTTTTAATTTTTTTCTACTCCTTCAG]
[-] EMBL OS0752A              [                                                                                                                                                                                                                                           caGCTGCTCGTCGGAGNATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTNAGGCCGTCGCCGCCGCNACCTNTGCGCTGTGGATCGGGCGGCNTTTGGCTTCAAGNCGGTTGGATCCAGTGTCCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATC                                                                                                ]


>consensus_9830#0 TTTTTTTAGAAATCAAGAAGAGGAAATTTACATTGATTCAATTATCCGTCAACGTCATCA ACAACAGCAGAACCAAATCACGGATCAAAATTCTTCTGCCATATTAGACATTCAACAAAA TAACAGGAGAACCAAACTGACTCACCGCCAACACCATCATCAATCTCCCTCTCAGCCGTG GTCACCTTCGATCCACACCTACCATGCGGCCATCAAGGAGAAGGGGGAGGCCGCCGCTGC TCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCG CCGCCACTGCTGCGCTGTGGATCGGGCGGCCTTTGGCTTCAAGGCGGTTGGATCCAGTGT CCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCG CGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATCGGG GCGGCGAGCTGAGAGGAATGACGAGTGGCGATGAGGACGAGGAAAGAGGATGAAGGAACG ATGCTCCTTTTTAATTTTTTTCTACTCCTTCAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)