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Oryza sativa
cluster # 9831 cluster # 9831       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9831#0 length = 1430 sequences # 3  
consensus_9831#1 length = 862 sequences # 1  
consensus_9831#2 length = 433 sequences # 2  

consensusID : consensus_9831#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1430
fasta sequence
                              [CTAGCTCCCGCCGCTCCGCACAGTAAGCTCACTTCTCCTCCTCCTCCCCCTTCCATGGCGGCCGCCCGCGCCACCCTCCCGCTCCCGCGTGTCCCCGCCCCCTCGCCGAGGCCCCAGCTCAGGCCCTTCCCCTCCCTCCCCGCTCGCCGCGGCGCGGTGGCATGCGGCGCCGGCTCGGCGGCGGCGGGGGTCGCGGCGTCGCTGCGGTTCGGGGACGTGATCGAGGCGCAGCAGTTCGACCGGGACGCGCTGACGGAGATCTTCGAGGTGGCGCGGGAGATGGAGGCCCTGGAGCGCGGGTCCTCCTCCCGCGGCGCCGGGAGGAGCCGCGTCCTCGAGGGGTACCTCATGGCCACGCTCTTCTATGAGCCGTCCACGCGCACGCGCCTCTCCTTCGAGGCCGCCATGCGGCGGCTCGGCGGGGAGGTGCTCACCACCGAGAACGCCCGCGAGTTCTCCTCCGCCGCCAAGGGCGAGACCCTGGAAGATACCATAAGGACTGTTGAGGGTTATTCTGATATTATTGTTCTGAGACATTTTGAAAGTGGGGCTGCAAGGAGAGCAGCCGCCACTGCAGACATTCCAGTTATTAATGCAGGCGATGGGCCAGGGCAACATCCAACTCAGGCTTTATTGGATGTCTATTCAATAGAGAGAGAAATTGGCACACTAGATGGAATAAAACTTGGTTTGGTTGGAGACCTTGCTAATGGAAGAACTGTTCGTTCTCTAGCCTATTTGATTGCCAAATACCAAAACATTAAGATATACTTTGTATCTCCAGATGTTGTAAAAATGAAGGATGACATCAAGGAATACTTAACTTCTCAAGGTGTTGAGTGGGAAGAAAGTTCAGATTTGTTGGAGGTGGCATCAAAATGCGATGTTATTTATCAAACACGCATTCAAAAAGAAAGATTCGGTGAGAGGATAGATCTTTATGAAGCAGCTCGTGGTAAGTACATTGTGGACAAGAAGGTCTTAGATGTGCTGCCAAAACATGCTGTTATCATGCATCCCCTTCCAAGGCTTGATGAGATCACAATAGATGTTGACAGTGATCCGAGAGCTGCATATTTTAGACAGGCCAAAAACGGCCTCTACATCAGAATGGCGTTGCTCAAACTTCTGCTTGTTGGTCGCTGACAGCTTTCTTAGTGCGTGGCGCTGTGGTGTTGATGGGGGTCAAAAAATGTTTGTCTTAATCAATGGCTCCAAATCAACTGATTAGTATTGTACTAGGCACCATAAGTTAGATCCTTGCAAGGATTTAACCATGTCTAGAACTCTAGATGCATAATTTTCGATGTAACAAAATATTCTGAAACAGAGATTTGTTGCTCTCATATGTTCTTGTGAATCATTATCACCGAGGACTGCACTAATTTTCCTACAGTGTTGTTGCAAGGACTGCAGTGATTTAAAAAAAA]

[+] EMBL AK065010             [CTAGCTCCCGCCGCTCCGCACAGTAAGCTCACTTCTCCTCCTCCTCCCCCTTCCATGGCGGCCGCCCGCGCCACCCTCCCGCTCCCGCGTGTCCCCGCCCCCTCGCCGAGGCCCCAGCTCAGGCCCTTCCCCTCCCTCCCCGCTCGCCGCGGCGCGGTGGCATGCGGCGCCGGCTCGGCGGCGGCGGGGGTCGCGGCGTCGCTGCGGTTCGGGGACGTGATCGAGGCGCAGCAGTTCGACCGGGACGCGCTGACGGAGATCTTCGAGGTGGCGCGGGAGATGGAGGCCCTGGAGCGCGGGTCCTCCTCCCGCGGCGCCGGGAGGAGCCGCGTCCTCGAGGGGTACCTCATGGCCACGCTCTTCTATGAGCCGTCCACGCGCACGCGCCTCTCCTTCGAGGCCGCCATGCGGCGGCTCGGCGGGGAGGTGCTCACCACCGAGAACGCCCGCGAGTTCTCCTCCGCCGCCAAGGGCGAGACCCTGGAAGATACCATAAGGACTGTTGAGGGTTATTCTGATATTATTGTTCTGAGACATTTTGAAAGTGGGGCTGCAAGGAGAGCAGCCGCCACTGCAGACATTCCAGTTATTAATGCAGGCGATGGGCCAGGGCAACATCCAACTCAGGCTTTATTGGATGTCTATTCAATAGAGAGAGAAATTGGCACACTAGATGGAATAAAACTTGGTTTGGTTGGAGACCTTGCTAATGGAAGAACTGTTCGTTCTCTAGCCTATTTGATTGCCAAATACCAAAACATTAAGATATACTTTGTATCTCCAGATGTTGTAAAAATGAAGGATGACATCAAGGAATACTTAACTTCTCAAGGTGTTGAGTGGGAAGAAAGTTCAGATTTGTTGGAGGTGGCATCAAAATGCGATGTTATTTATCAAACACGCATTCAAAAAGAAAGATTCGGTGAGAGGATAGATCTTTATGAAGCAGCTCGTGGTAAGTACATTGTGGACAAGAAGGTCTTAGATGTGCTGCCAAAACATGCTGTTATCATGCATCCCCTTCCAAGGCTTGATGAGATCACAATAGATGTTGACAGTGATCCGAGAGCTGCATATTTTAGACAGGCCAAAAACGGCCTCTACATCAGAATGGCGTTGCTCAAACTTCTGCTTGTTGGTCGCTGACAGCTTTCTTAGTGCGTGGCGCTGTGGTGTTGATGGGGGTCAAAAAATGTTTGTCTTAATCAATGGCTCCAAATCAACTGATTAGTATTGTACTAGGCACCATAAGTTAGATCCTTGCAAGGATTTAACCATGTCTAGAACTCTAGATGCATAATTTTCGATGTAACAAAATATTCTGAAACAGAGATT                                                                                               ]
[+] EMBL AB037416             [                                                               GCCCGCGCCACCCTCCCGCTCCCGCGTGTCCCCGCCCCCTCGCCGAGGCCCCAGCTCAGGCCCTTCCCCTCCCTCCCCGCTCGCCGCGGCGCGGTGGCATGCGGCGCCGGCTCGGCGGCGGCGGGGGTCGCGGCGTCGCTGCGGCTCGGGGACGTGATCGAGGCGCAGCAGTTCGACCGGGACGCGCTGACGGAGATCTTCGAGGTGGCGCGGGAGATGGAGGCCCTGGAGCGCGGGTCCTCCTCCCGCGGCGCCGGGAGGAGCCGCGTCCTCGAGGGGTACCTCATGGCCACGCTCTTCTATGAGCCGTCCACGCGCACGCGCCTCTCCTTCGAGGCCGCCATGCGGCGGCTCGGCGGGGAGGTGCTCACCACCGAGAACGCCCGCGAGTTCTCCTCCGCCGCCAAGGGCGAGACCCTGGAAGATACCATAAGGACTGTTGAGGGTTATTCTGATATTATTGTTCTGAGACATTTTGAAAGTGGGGCTGCAAGGAGAGCAGCCGCCACTGCAGACATTCCAGTTATTAATGCAGGCGATGGGCCAGGGCAACATCCAACTCAGGCTTTATTGGATGTCTATTCAATAGAGAGAGAAATTGGCACACTAGATGGAATAAAACTTGGTTTGGTTGGAGACCTTGCTAATGGAAGAACTGTTCGTTCTCTAGCCTATTTGATTGCCAAATACCAAAACATTAAGATATACTTTGTATCTCCAGATGTTGTAAAAATGAAGGATGACATCAAGGAATACTTAACTTCTCAAGGTGTTGAGTGGGAAGAAAGTTCAGATTTGTTGGAGGTGGCATCAAAATGCGATGTTATTTATCAAACACGCATTCAAAAAGAAAGATTCGGTGAGAGGATAGATCTTTATGAAGCAGCTCGTGGTAAGTACATTGTGGACAAGAAGGTCTTAGATGTGCTGCCAAAACATGCTGTTATCATGCATCCCCTTCCAAGGCTTGATGAGATCACAATAGATGTTGACAGTGATCCGAGAGCTGCATATTTTAGACAGGCCAAAAACGGCCTCTACATCAGAATGGCGTTGCTCAAACTTCTGCTTGTTGGTCGCTGACAGCTTTCTTAGTGCGTGGCGCTGTGGTGTTGATGGGGGTCAAAAAATGTTTGTCTTAATCAATGGCTCCAAATCAACTGATTAGTATTGTACTAGGCACCATAAGTTAGATCCTTGCAAGGATTTAACCATGTCTAGAACTCTAGATGCATAATTTTCGATGTAACAAAATATTCTGAAACAGAGATTTGTTGCTCTCATATGTTCTTGTGAATCATTATCACCGAGGACTGCACTAATTTTCCTACAGTGTTGTTGCAAGGACTGCAGTGATTTAAAAAAAA]
[+] EMBL C27734               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGGGTTATTCTGATATTATTGTTCTGAGACATTTTGAANGTGGGGCTGCAAGGAGAGCAGCCGCCACTGCAGACATTCCAGTTATTAATGCAGGCGATGGGCCAGGGCAACATCCAACTCAGGCTTTATTGGATGTCTATTCAATAGAGAGAGAAATTGGCACACTAGATGGAATAAAACTTGGTTTGGTTGGAGACCTTGCTAATGGAAGAACTGTTCGTTCTCTAGCCTATTTGATTGCCAAATACCAAAACATTAAGATATACTTTGTATCTCCAGATGTTGTAAAAATGAAGGATGACATCANGGAATACTTAACTTCTCAAGGTGTTGAGTGGGAGGAAAGTTCAGATTTGTTGGAGGTGGCATCAAAATGCGATGTTATTTATCAAACACGCATTCAAAAAG AAGATTCGGTGAGAGG TAGATCTTTATGAAGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]


>consensus_9831#0 CTAGCTCCCGCCGCTCCGCACAGTAAGCTCACTTCTCCTCCTCCTCCCCCTTCCATGGCG GCCGCCCGCGCCACCCTCCCGCTCCCGCGTGTCCCCGCCCCCTCGCCGAGGCCCCAGCTC AGGCCCTTCCCCTCCCTCCCCGCTCGCCGCGGCGCGGTGGCATGCGGCGCCGGCTCGGCG GCGGCGGGGGTCGCGGCGTCGCTGCGGTTCGGGGACGTGATCGAGGCGCAGCAGTTCGAC CGGGACGCGCTGACGGAGATCTTCGAGGTGGCGCGGGAGATGGAGGCCCTGGAGCGCGGG TCCTCCTCCCGCGGCGCCGGGAGGAGCCGCGTCCTCGAGGGGTACCTCATGGCCACGCTC TTCTATGAGCCGTCCACGCGCACGCGCCTCTCCTTCGAGGCCGCCATGCGGCGGCTCGGC GGGGAGGTGCTCACCACCGAGAACGCCCGCGAGTTCTCCTCCGCCGCCAAGGGCGAGACC CTGGAAGATACCATAAGGACTGTTGAGGGTTATTCTGATATTATTGTTCTGAGACATTTT GAAAGTGGGGCTGCAAGGAGAGCAGCCGCCACTGCAGACATTCCAGTTATTAATGCAGGC GATGGGCCAGGGCAACATCCAACTCAGGCTTTATTGGATGTCTATTCAATAGAGAGAGAA ATTGGCACACTAGATGGAATAAAACTTGGTTTGGTTGGAGACCTTGCTAATGGAAGAACT GTTCGTTCTCTAGCCTATTTGATTGCCAAATACCAAAACATTAAGATATACTTTGTATCT CCAGATGTTGTAAAAATGAAGGATGACATCAAGGAATACTTAACTTCTCAAGGTGTTGAG TGGGAAGAAAGTTCAGATTTGTTGGAGGTGGCATCAAAATGCGATGTTATTTATCAAACA CGCATTCAAAAAGAAAGATTCGGTGAGAGGATAGATCTTTATGAAGCAGCTCGTGGTAAG TACATTGTGGACAAGAAGGTCTTAGATGTGCTGCCAAAACATGCTGTTATCATGCATCCC CTTCCAAGGCTTGATGAGATCACAATAGATGTTGACAGTGATCCGAGAGCTGCATATTTT AGACAGGCCAAAAACGGCCTCTACATCAGAATGGCGTTGCTCAAACTTCTGCTTGTTGGT CGCTGACAGCTTTCTTAGTGCGTGGCGCTGTGGTGTTGATGGGGGTCAAAAAATGTTTGT CTTAATCAATGGCTCCAAATCAACTGATTAGTATTGTACTAGGCACCATAAGTTAGATCC TTGCAAGGATTTAACCATGTCTAGAACTCTAGATGCATAATTTTCGATGTAACAAAATAT TCTGAAACAGAGATTTGTTGCTCTCATATGTTCTTGTGAATCATTATCACCGAGGACTGC ACTAATTTTCCTACAGTGTTGTTGCAAGGACTGCAGTGATTTAAAAAAAA



consensusID : consensus_9831#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 862
fasta sequence
                              [ACGAGACAAGGGGGAGGGTTATTCTGATATTATTGTTCTGAGACATTTTGAAAGTGGAGCTGCAAGGAGAGCAGCCGCCACTGCAGACATTCCAGTTATTAATGCAGGCGATGGGCCAGGGCAACATCCAACTCAGGCTTTATTGGATGTCTATACAATAGAGAGAGAAATTGGCACACTAGATGGAATAAAACTTGGTTTGGTTGGAGACCTTGCTAATGGAAGAGCTGTTCGTTCTCTAGCCTATTTGATTGCCAAATACCAAAACATTAAGATATACTTTGTATCTCCAGATGTTGTAAAAATGAAGGATGACATCAAGGAATACTTAACTTCTCAAGGTGTTGAGTGGGAAGAAAGTTCAGATTTGTTGGAGGTGGCATCAAAATGCGATGTTATTTATCAAACACGCATTCAAAAAGAAAGATTCGGTGAGAGGATTGATCTTTATGAAGCAGCTCGTGGTAAGTACATTGTGGACAAGAAGGTCTTAGATGTACTGCCAAAACATGCTGNTATCATGCATCCCCTTNCAAGGCTTGATGAGATCACAATAGATGNTGACAGTGATCCGAGAGCTGCATATTTTAGACAGGCCAAAACGGCCTCTACATCAGAATGGCGGTGCTCAAACTTCTGCTTGNTGGTCGCTGACAGCTTTCTTANTGCGTGGTGCTGGGGTGNTGATNGGGGGTCAAAAAAGGTTGNCNTAATCAATGGCTCCAAACACTGATTAGTATTGGNCTAGGCNCCATAAGTTANATCCTTGCCANGGATTTAANCATGGCTANAACTCTANAGCCTAATTTTCGANGNACAAAAATTCTGAACAGAAATTGGTGCTCCCAAAGGTCCTNGGGAA]

[+] EMBL CA763933             [ACGAGACAAGGGGGAGGGTTATTCTGATATTATTGTTCTGAGACATTTTGAAAGTGGAGCTGCAAGGAGAGCAGCCGCCACTGCAGACATTCCAGTTATTAATGCAGGCGATGGGCCAGGGCAACATCCAACTCAGGCTTTATTGGATGTCTATACAATAGAGAGAGAAATTGGCACACTAGATGGAATAAAACTTGGTTTGGTTGGAGACCTTGCTAATGGAAGAGCTGTTCGTTCTCTAGCCTATTTGATTGCCAAATACCAAAACATTAAGATATACTTTGTATCTCCAGATGTTGTAAAAATGAAGGATGACATCAAGGAATACTTAACTTCTCAAGGTGTTGAGTGGGAAGAAAGTTCAGATTTGTTGGAGGTGGCATCAAAATGCGATGTTATTTATCAAACACGCATTCAAAAAGAAAGATTCGGTGAGAGGATTGATCTTTATGAAGCAGCTCGTGGTAAGTACATTGTGGACAAGAAGGTCTTAGATGTACTGCCAAAACATGCTGNTATCATGCATCCCCTTNCAAGGCTTGATGAGATCACAATAGATGNTGACAGTGATCCGAGAGCTGCATATTTTAGACAGGCCAAAACGGCCTCTACATCAGAATGGCGGTGCTCAAACTTCTGCTTGNTGGTCGCTGACAGCTTTCTTANTGCGTGGTGCTGGGGTGNTGATNGGGGGTCAAAAAAGGTTGNCNTAATCAATGGCTCCAAACACTGATTAGTATTGGNCTAGGCNCCATAAGTTANATCCTTGCCANGGATTTAANCATGGCTANAACTCTANAGCCTAATTTTCGANGNACAAAAATTCTGAACAGAAATTGGTGCTCCCAAAGGTCCTNGGGAA]


>consensus_9831#1 ACGAGACAAGGGGGAGGGTTATTCTGATATTATTGTTCTGAGACATTTTGAAAGTGGAGC TGCAAGGAGAGCAGCCGCCACTGCAGACATTCCAGTTATTAATGCAGGCGATGGGCCAGG GCAACATCCAACTCAGGCTTTATTGGATGTCTATACAATAGAGAGAGAAATTGGCACACT AGATGGAATAAAACTTGGTTTGGTTGGAGACCTTGCTAATGGAAGAGCTGTTCGTTCTCT AGCCTATTTGATTGCCAAATACCAAAACATTAAGATATACTTTGTATCTCCAGATGTTGT AAAAATGAAGGATGACATCAAGGAATACTTAACTTCTCAAGGTGTTGAGTGGGAAGAAAG TTCAGATTTGTTGGAGGTGGCATCAAAATGCGATGTTATTTATCAAACACGCATTCAAAA AGAAAGATTCGGTGAGAGGATTGATCTTTATGAAGCAGCTCGTGGTAAGTACATTGTGGA CAAGAAGGTCTTAGATGTACTGCCAAAACATGCTGNTATCATGCATCCCCTTNCAAGGCT TGATGAGATCACAATAGATGNTGACAGTGATCCGAGAGCTGCATATTTTAGACAGGCCAA AACGGCCTCTACATCAGAATGGCGGTGCTCAAACTTCTGCTTGNTGGTCGCTGACAGCTT TCTTANTGCGTGGTGCTGGGGTGNTGATNGGGGGTCAAAAAAGGTTGNCNTAATCAATGG CTCCAAACACTGATTAGTATTGGNCTAGGCNCCATAAGTTANATCCTTGCCANGGATTTA ANCATGGCTANAACTCTANAGCCTAATTTTCGANGNACAAAAATTCTGAACAGAAATTGG TGCTCCCAAAGGTCCTNGGGAA



consensusID : consensus_9831#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 433
fasta sequence
                              [GACAAGAGGGCTTAGATGTCCTCCNAAACATGCTGGTANCATGCACCCCCCTCCAAGGCTTGATGAGATCACAATAGATGTTGACAGTGATCCGAGAGCTGCATATTTTAGACAGGCCAAAAACGGCCTCTACATCAGAATGGCGTTGCTCAAACTTCTGCTTGTTGGCCCTGACAGCTTTCTTAGTNCGTGGCGCTGTGGTGTTGATGGGGGTCAAAAAATGTTTGTCTTAATCAATGGCTCCAAATCAACTGATTAGTATTGTACTAGGCACCATAAGTTAGANCCTTGCAAGGATTTAACCATGTCTAGAACTCTAGATGCATAATTTTCGATGTAACAAAATATTCTGAAACAGAGATTTGTTGCTCTCATATGTTCTTGTGAATCATTATCACCGAGGACTGCACTAATTTTCCTAAAAAAAAAAAAA]

[+] EMBL C97070               [GACAAGAGGGCTTAGATGTCCTCCNAAACATGCTGGTANCATGCACCCCCCTCCAAGGCTTGATGAGATCACAATAGATGTTGACAGTGATCCGAGAGCTGCATATTTTAGACAGGCCAAAAACGGCCTCTACATCAGAATGGCGTTGCTCAAACTTCTGCTTGTTGGCCCTGACAGCTTTCTTAGTNCGTGGCGCTGTGGTGTTGATGGGGGTCAAAAAATGTTTGTCTTAATCAATGGCTCCAAATCAACTGATTAGTATTGTACTAGGCACCATAAGTTAGANCCTTGCAAGGATTTAACCATGTCTAGAACTCTAGATGCATAATTTTCGATGTAACAAAATATTCTGAAACAGAGATTTGTTGCTCTCATATGTTCTTGTGAATCATTATCACCGAGGACTGCACTAATTTTCCTAAAAAAAAAAAAA]
[+] EMBL D42727               [                                                                                                                                                                                                                         AAAATGTTTGTCTTAATCAATGGCTCCAAATCAACTGATTAGTATTGTACTAGGCACCATAAGTTAGANCCTTGCAAGGANNTAACCATGTCTAGAACTCTAGATGCATAATTTTCNNTGTAACNGNNTATTCTGAAACAGAGATTTGCNGCTCTCATATGTTCTTGTGAATCATTATCACCGAGGACTGCACTA                     ]


>consensus_9831#2 GACAAGAGGGCTTAGATGTCCTCCNAAACATGCTGGTANCATGCACCCCCCTCCAAGGCT TGATGAGATCACAATAGATGTTGACAGTGATCCGAGAGCTGCATATTTTAGACAGGCCAA AAACGGCCTCTACATCAGAATGGCGTTGCTCAAACTTCTGCTTGTTGGCCCTGACAGCTT TCTTAGTNCGTGGCGCTGTGGTGTTGATGGGGGTCAAAAAATGTTTGTCTTAATCAATGG CTCCAAATCAACTGATTAGTATTGTACTAGGCACCATAAGTTAGANCCTTGCAAGGATTT AACCATGTCTAGAACTCTAGATGCATAATTTTCGATGTAACAAAATATTCTGAAACAGAG ATTTGTTGCTCTCATATGTTCTTGTGAATCATTATCACCGAGGACTGCACTAATTTTCCT AAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9831#0      CTAGCTCCCGCCGCTCCGCACAGTAAGCTCACTTCTCCTCCTCCTCCCCCTTCCATGGCG 60
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      ------------------------------------------------------------
                                                                                  

consensus_9831#0      GCCGCCCGCGCCACCCTCCCGCTCCCGCGTGTCCCCGCCCCCTCGCCGAGGCCCCAGCTC 120
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      ------------------------------------------------------------
                                                                                  

consensus_9831#0      AGGCCCTTCCCCTCCCTCCCCGCTCGCCGCGGCGCGGTGGCATGCGGCGCCGGCTCGGCG 180
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      ------------------------------------------------------------
                                                                                  

consensus_9831#0      GCGGCGGGGGTCGCGGCGTCGCTGCGGTTCGGGGACGTGATCGAGGCGCAGCAGTTCGAC 240
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      ------------------------------------------------------------
                                                                                  

consensus_9831#0      CGGGACGCGCTGACGGAGATCTTCGAGGTGGCGCGGGAGATGGAGGCCCTGGAGCGCGGG 300
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      ------------------------------------------------------------
                                                                                  

consensus_9831#0      TCCTCCTCCCGCGGCGCCGGGAGGAGCCGCGTCCTCGAGGGGTACCTCATGGCCACGCTC 360
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      ------------------------------------------------------------
                                                                                  

consensus_9831#0      TTCTATGAGCCGTCCACGCGCACGCGCCTCTCCTTCGAGGCCGCCATGCGGCGGCTCGGC 420
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      ------------------------------------------------------------
                                                                                  

consensus_9831#0      GGGGAGGTGCTCACCACCGAGAACGCCCGCGAGTTCTCCTCCGCCGCCAAGGGCGAGACC 480
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      ------------------------------------------------------------
                                                                                  

consensus_9831#0      CTGGAAGATACCATAAGGACTGTTGAGGGTTATTCTGATATTATTGTTCTGAGACATTTT 540
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      -----------ACGAGACAAGGGGGAGGGTTATTCTGATATTATTGTTCTGAGACATTTT 49
                                                                                  

consensus_9831#0      GAAAGTGGGGCTGCAAGGAGAGCAGCCGCCACTGCAGACATTCCAGTTATTAATGCAGGC 600
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      GAAAGTGGAGCTGCAAGGAGAGCAGCCGCCACTGCAGACATTCCAGTTATTAATGCAGGC 109
                                                                                  

consensus_9831#0      GATGGGCCAGGGCAACATCCAACTCAGGCTTTATTGGATGTCTATTCAATAGAGAGAGAA 660
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      GATGGGCCAGGGCAACATCCAACTCAGGCTTTATTGGATGTCTATACAATAGAGAGAGAA 169
                                                                                  

consensus_9831#0      ATTGGCACACTAGATGGAATAAAACTTGGTTTGGTTGGAGACCTTGCTAATGGAAGAACT 720
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      ATTGGCACACTAGATGGAATAAAACTTGGTTTGGTTGGAGACCTTGCTAATGGAAGAGCT 229
                                                                                  

consensus_9831#0      GTTCGTTCTCTAGCCTATTTGATTGCCAAATACCAAAACATTAAGATATACTTTGTATCT 780
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      GTTCGTTCTCTAGCCTATTTGATTGCCAAATACCAAAACATTAAGATATACTTTGTATCT 289
                                                                                  

consensus_9831#0      CCAGATGTTGTAAAAATGAAGGATGACATCAAGGAATACTTAACTTCTCAAGGTGTTGAG 840
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      CCAGATGTTGTAAAAATGAAGGATGACATCAAGGAATACTTAACTTCTCAAGGTGTTGAG 349
                                                                                  

consensus_9831#0      TGGGAAGAAAGTTCAGATTTGTTGGAGGTGGCATCAAAATGCGATGTTATTTATCAAACA 900
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      TGGGAAGAAAGTTCAGATTTGTTGGAGGTGGCATCAAAATGCGATGTTATTTATCAAACA 409
                                                                                  

consensus_9831#0      CGCATTCAAAAAGAAAGATTCGGTGAGAGGATAGATCTTTATGAAGCAGCTCGTGGTAAG 960
consensus_9831#2      ------------------------------------------------------------
consensus_9831#1      CGCATTCAAAAAGAAAGATTCGGTGAGAGGATTGATCTTTATGAAGCAGCTCGTGGTAAG 469
                                                                                  

consensus_9831#0      TACATTGTGGACAAGAAGGTCTTAGATGTGCTGCCAAAACATGCTGTTATCATGCATCCC 1020
consensus_9831#2      ---------GACAAGAGGG-CTTAGATGTCCT-CCNAAACATGCTGGTANCATGCACCCC 49
consensus_9831#1      TACATTGTGGACAAGAAGGTCTTAGATGTACTGCCAAAACATGCTGNTATCATGCATCCC 529
                               ******* ** ********* ** ** ********** ** ****** ***

consensus_9831#0      CTTCCAAGGCTTGATGAGATCACAATAGATGTTGACAGTGATCCGAGAGCTGCATATTTT 1080
consensus_9831#2      CCTCCAAGGCTTGATGAGATCACAATAGATGTTGACAGTGATCCGAGAGCTGCATATTTT 109
consensus_9831#1      CTTNCAAGGCTTGATGAGATCACAATAGATGNTGACAGTGATCCGAGAGCTGCATATTTT 589
                      * * *************************** ****************************

consensus_9831#0      AGACAGGCCAAAAACGGCCTCTACATCAGAATGGCGTTGCTCAAACTTCTGCTTGTTGGT 1140
consensus_9831#2      AGACAGGCCAAAAACGGCCTCTACATCAGAATGGCGTTGCTCAAACTTCTGCTTGTTGGC 169
consensus_9831#1      AGACAGGCCAAAA-CGGCCTCTACATCAGAATGGCGGTGCTCAAACTTCTGCTTGNTGGT 648
                      ************* ********************** ****************** *** 

consensus_9831#0      CGCTGACAGCTTTCTTAGTGCGTGGCGCTGTGGTGTTGATGGGGGTCAAAAAATGTTTGT 1200
consensus_9831#2      C-CTGACAGCTTTCTTAGTNCGTGGCGCTGTGGTGTTGATGGGGGTCAAAAAATGTTTGT 228
consensus_9831#1      CGCTGACAGCTTTCTTANTGCGTGGTGCTGGGGTGNTGATNGGGGGTCAAAAAAGGTTGN 708
                      * *************** * ***** **** **** **** ****   ***** * *** 

consensus_9831#0      CTTAATCAATGGCTCCAAATCAACTGATTAGTATTGTACTAGGCACCATAAGTTAGATCC 1260
consensus_9831#2      CTTAATCAATGGCTCCAAATCAACTGATTAGTATTGTACTAGGCACCATAAGTTAGANCC 288
consensus_9831#1      CNTAATCAATGGCTCCAAAC--ACTGATTAGTATTGGNCTAGGCNCCATAAGTTANATCC 766
                      * *****************   **************  ****** ********** * **

consensus_9831#0      TTGC-AAGGATTTAACCATGTCTAGAACTCTAGATGCATAATTTTCGATGTAACAAAATA 1319
consensus_9831#2      TTGC-AAGGATTTAACCATGTCTAGAACTCTAGATGCATAATTTTCGATGTAACAAAATA 347
consensus_9831#1      TTGCCANGGATTTAANCATGGCTANAACTCTANA-GCCTAATTTTCGANGNA-CAAAA-A 823
                      **** * ******** **** *** ******* * ** ********** * * ***** *

consensus_9831#0      TTCTGAAACAGAGATTTGTTGCTCTCATATGTTCTTGTGAATCATTATCACCGAGGACTG 1379
consensus_9831#2      TTCTGAAACAGAGATTTGTTGCTCTCATATGTTCTTGTGAATCATTATCACCGAGGACTG 407
consensus_9831#1      TTCTGAA-CAGAAATTGGT-GCTCCCAAAGGTCCTNGGGAA------------------- 862
                      ******* **** *** ** **** ** * ** ** * ***                   

consensus_9831#0      CACTAATTTTCCTACAGTGTTGTTGCAAGGACTGCAGTGATTTAAAAAAAA 1430
consensus_9831#2      CACTAATTTTCCTAAAAAA-----AAAAAAA-------------------- 433
consensus_9831#1      ---------------------------------------------------
                                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)