These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9862#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 917 fasta sequence [CAGAGTAGAAACTCTGACTTCGGAGACGCGTACGCTTCTCTCTCTTTCC-CGGGGCTCAGCTCGCTTCCGGAAGCTCTCTCGCGAGGCGCCCATGGCGGCGGGAGAAGGCAAGGCCCCGACGCTCGCCGCCGAGGAACACACACTCCCACCCCACGAGGTCCCTGTGGAAAATTCATCCTCTGAAAAATCTTCTGATAACAGTGTGGCTGAAGTTGTTCCTGAGAAAGATGCTGAAACACCAGCAGCTCAGGACACCACTTCTGTTGTTGAGGACAAAAGTGAAACTCCCGAGATGACAGCATCCTCTGAGAAGCCAGAAGAAGAGGGGAGCAATGCTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATATCATA-GGTGTGTAGCTGCAAAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTG-CAAAATATTATCGATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATTCCCTGGACCCTTGTAGGCCATAACAAAGAAAAACCCATGCTATCATCCCA-CAAATTCCCAACCAATCTTTCATGAATAACCGGACAAAATAACCA-AGAGCTGATGCTGTCAGTCACTTGTTTCTATTGAACAGTTCTTACAAATAAAAGTCCTGACTGGTTCTAAGTCGAAGAAGGCGCTTCTGTATTTAGGTAACACAGTTGTTACGGAATTGTTCAAATAATTCACCTTTGGAACAATGGAATGTACCCAGCTTGCTGTCCCAAAAAAACAATGTTCATATGATATGACGTGCAATGTTCATATGAAAAAAAAAA] [+] EMBL CF320924 [ GAGTAGAAACTCTGACTTCGGAGACGCGTACGCTTCTCTCTCTTTCC CGGGGCTCAGCTCGCTTCCGGAAGCTCTCTCGCGAGGCGCCCATGGCGGCGGGAGAAGGCAAGGCCCCGACGCTCGCCGCCGAGGAACACACACTCCCACCCCACGAGGTCCCTGTGGTAAATTCATCCTCTGAAAAATCTTCTGATAACAGTGTGGCTGAAGTTGTTCCTGAGAAAGATGCTGAAACACCAGCAGCTCAGGACACCACTTCTGTTGTTGAGGACAAAAGTGAAACTCCCGAGATGACAGCATCCTCTGAGAAGCCAGAAGAAGAGGGGAGCAATGTTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATATCATAGGGTGTGTAGCTGCAAAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTG CAAAATATTATCGATCACTNTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATTCC ] [+] EMBL CF337460 [cagctcgaagcCTCGGACTTCGGAGACGCGTACGCTTCTCTCTCTTTCCACGGGGCTCAGCTCGCTTCCGGAAGCTCTCTCGCGAGGCGCCCATGGCGGCGGGAGAAGGCAAGGCCCCGACGCTCGCCGCCGAGGAACACACACTCCCACCCCACGAGGTCCCTGTGGAAAATTCATCCTCTGAAAAATCTTCTGATAACAGTGTGGCTGAAGTTGTTCCTGAGAAAGATGCTGAAACACCAGCAGCTCAGGACACCACTTCTGTTGTTGAGGACAAAAGTGAAACTCCCGAGATGACAGCATCCTCTGAGAAGCCAGAAGAAGAGGGGAGCAATGCTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTAT ] [+] EMBL CF318724 [ TCGGAGACGCGTACGCTTCTCTCTCTTTCC CGGGGCTCAGCTCGCTTCCGGAAGCTCTCTCGCGAGGCGCCCATGGCGGCGGGAGAAGGCAAGGCCCCGACGCTCGCCGCCGAGGAACACACACTCCCACCCCACGAGGTCCCTGTGGAAAATTCATCCTCTGAAAAATCTTCTGATAACAGTGTGGCTGAAGTTGTTCCTGAGAAAGATGCTGAAACACCAGCAGCTCAGGACACCACTTCTGTTGTTGAGGACAAAAGTGAAACTCCCGAGATGACAGCATCCTCTGAGAAGCCAGAAGAAGAGGGGAGCAATGCTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATACCATA GGTGTGTAGCTGC AAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTG CAAAATATTATCGATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGC ] [-] EMBL CF318725 [ AAACTCCCGAGATGACAGCATCCTCTGAGAAGCCAGAAGAAGAGGGGAGCAATGCTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATACCATA GGTGTGTAGCTGCAAAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTG CAAAATATTATCGATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATTCCCTGGACCCTTGTAGGCCATAACAAAGAAAAACCCATGCTATCATCCCA CAAATTCCCAACCAATCTTTCATGAATGACCGGACAAAATAACCA AGAGCTGATGCTGTCAGTCACTTGTTTCTATTGAACAGTTCTTACAAATAAAAGTCCTGACTGGTTCTAAGTCGAAGAAGGCGCTTCTGTATTTAGGTAACACAGTTGTTACGGAATTGTTCAAATAATTCACCTTTGGAACAATGGAATGTACCCAGCTTGCTGTCCCAAAAAA ] [-] EMBL CF320925 [ AAGAAGAGGGGAGCAATGTTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATATCATA GGTGTGTAGCTGCAAAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTG CAAAATATTATCGATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATTCCCTGGACCCTTGTAGGCCATAACAAAGAAAAACCCATGCTATCATCCCA CAAATTCCCAACCAATCTTTCATGAATAACCGGACAAAATAACCA AGAGCTGATGCTGTCAGTCACTTGTTTCTATTGAACAGTTCTTACAAATAAAAGTCCTGACTGGTTCTAAGTCGAAGAAGGCGCTTCTGTATTTAGGTAACACAGTTGTTACGGAATTGTTCAAATAATTCACC TTGGAACAAaaaa ] [-] EMBL CF317999 [ GAAGAGGGGAGCAATGCTGCTACAGAGGAAAGCAATGAGGCTGAAGAGGAAACAATTGATGAGAAGCCAGAAATTAAGATTGAGACGGCTCCCGCTGATTTTCGTTTCCCAACAACAAATCAAACAAGGCATTGCTTCACACGCTATATTGAATATCATA GGTGTGTAGCTGCAAAAGGAGAGGGTGCTCCTGAGTGTGAAAAATTTG CAAAATATTATCGATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATTCCCTGGACCCTTGTAGGCCATAACAAAGAAAAACCCATGCTATCATCCCA CAAATTCCCAACCAATCTTTCATGAATAACCGGACAAAATAACCA AGAGCTGATGCTGTCAGTCACTTGTTTCTATTGAACAGTTCTTACAAATAAAAGTCCTGACTGGTTCTAAGTCGAAGAAGGCGCTTCTGTATTTAGGTAACACAGTTGTTACGGAATTGTTCAAATAATTCACCTTTGGAACAATGGAATGTACCCAGCTTGCTGTCCCAAAAAAA ] [+] EMBL BI803395 [ AGAGGGTGCTCCTGAGTGTGAAAAATTTGCCAAAATATTATCGATCACTTTGCCCAAGTGAATGGATTGAGCGTTGGAACGAACAACGTGAGAATGGCACATTCCCTGGACCCTTGTAGGCCATAACAAAGAAAAACCCATGCTATCATCCCACCAAATTCCCAACCAATCTTTCATGAATAACCGGACCAAATAACCACAGAGCTGATGCTGTCAGTCACTTGTTTCTATTGAACAGTTCTTACAAATAAAAGTCCTGACTGGTTCTAAGTCGAAGAAGGCGCTTCTGTATTTAGGTAACACAGTTGTTACGGAATTGTTCAAATAATTCACCTTTGGAACCATGGAATGTACCCAGCTTGCTGTCCCACCCGTGCAATGTTCATATGATATGACGTGCAATGTTCATATGAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||