cluster # 9876

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Oryza sativa
cluster # 9876 cluster # 9876 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9876#0 length = 2131 sequences # 7
consensusID : consensus_9876#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2131
fasta sequence
                              [CAGTGGCAGCAGCCACCACTTTGCACAAAAGAAGCAAAGTAAATGGATGGCCATCGCCGTTGAGGAAGGGTTGGTGGCCATCTAGAGAGAGAGAGAGAAACTAGAGAGAGAGAGGGGTGAGCAGCTGAGCTCTGCATCTATATACAGCACTGCATCTCTCTCTATTTCTCTCTCTATATATATCTCTATCTACAGTGGATTTTCTCTCTCCTCTCTCTCTCTTGCCGTTGCTGTTCGATACTGTTGTTGTCCTCTCGTGGCCATTATTAGATGGCCTCCTGCTGCTGAAATGTGAGTGAGAGCTTTGCTTTGCTTGCTTGCTGGCTGGCTGGCTGGCTAGCTGGGGGTTGGCTTCCCCTCATCCTCGTGCATCATCCACTGTGCTCGGCTCAGCTGTCTGCCCTGTTCTTGCTTTGGTGGTTGGACGGTTAGCATCTTCCTCCTCAAGCTGAGATCCTTCTTGACGCCATTGGAGGGGTCGCTGTCGCCTGCGTCCTTGAGCCTCCCTGCTTTTCTTTT------TC-TCTCTCTCTCTCCTCGGCGAGGGAGACGACGACGACGGTGGCGGCGGCGATGCTGAGCTTCAAGCAGAGCCACGAGGGGTTCGGCCATGTCGCCGCCGCTGGAGCTGGACCGCAGCAGCAGC-AGCAGCCGTGGTGGGCGGGGTCGCAGCTGCTGTACGGGGAGGCGTCGCCGGAGGAGGCGGCGCTGCGCGACGGCGGCCAGTTCCAGGTCGTGCCCGGAGGCCGCGCCGCGCTGGATCCGGCGGCGCCGGAGCCGGAGAAGACGGCGGTGCCGGCGATGCCCAAGAGAGGAGGAGGAGGAGGGGCTCCTGAGGTGCTGAAATTCTCGGTGTTTTCAGGTAATTTGGAGCCGGGAGATACAGGAGAGAAGAACAGAGAGCACTCTGCCACTATTGCAATGCAATCGCCGTTGCCAGAATACAACGGCCATTTCGAGCTTGGTCTTGGTCAATCCATGGTCTCTCCCAATTATCCTTGTATTGACCAATGCTATGGTCTTATGACCACCTACGCGATGAAATCAATGAGTGGCGGGCGAATGCTACTGCCGCTGAACGCGCCAGCCGATGCGCCGATCTATGTCAACGCGAAGCAGTACGAAGGCATCCTCCGCCGTCGCCGTGCCCGCGCCAAGGCCCAGAGGGAGAACAGGCTGGTCAAAGGCAGGAAGCCCTACCTCCACGAGTCGCGCCACCGCCACGCCATGCGCCGGGCCAGAGGCTCCGGCGGCCGCTTCCTCAACACCAAGAAAGAAGCCACCGCCGCCGGATGCGGCGGCAGCAGCAAGACGCCCCTCGCGTCCCTCGTCAGCCCCGCCGACGTAGCCCATCGTCCAGGCTCCGGCGGCCGCGCGTCCAGCCTCTCCGGCTCCGACGTGTCGTCGCCGGGAGGCGTCATGTACGACCACCACCGCCACGACGACGCCGACGCGGCGGACCACTACAACAGCATCGACCACCACCTCCGCACGCCGTTCTTCACCCCGCTCCCGATCATCATGGACAGCGGCGGCGGCGGCGGCGACCACGCCTCACACTCCGCCGCCGCCGTCGCCGCCCCCTTCAGGTGGGCGACGGCGGCCGGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGACAGCCTTGAGGCGGGGATCTCCAGGCGTGCCCAGAGCTGCTGCTGATCGATCACCATCAGCTTTGGCTGCCTGTAGGCAAATCATTCTTGGCTCTTTACTTGCATTGGGGTTCTTGCAAGCAACTCTCCTCGTCACCTACCAAAACTGTCCCTGAAACTTCTCTAGTGCTGGGGTCTCGATCAGGGATGATGATGTGATGGAGGAGAGGCTTACCCATATGCCTGTAAATTATGGTTAGTGTTCTGATTAAGCAACTAGTAGTACTTGGTAAT-TACTGGCTATGAATTAGTAGTATGGACTC--TGGTGTCAGGTTGCTCTTTGTCTGAATAAACTGGAGTCGTTTGAAGCTTTGCAACAGCTGTGAGTGAAACTATGTGCTTGCTTGCTTGCTTGTTGTTGGAGTGATTAAGCTGGAGTTTTGTCTGGTTTGGGTGTGTGAGACCAGTGAGATACTGTGACTGTCGATATCAATGTTGATGAATGATTTATGACCTT]

[+] EMBL AK106398             [CAGTGGCAGCAGCCACCACTTTGCACAAAAGAAGCAAAGTAAATGGATGGCCATCGCCGTTGAGGAAGGGTTGGTGGCCATCTAGAGAGAGAGAGAGAAACTAGAGAGAGAGAGGGGTGAGCAGCTGAGCTCTGCATCTATATACAGCACTGCATCTCTCTCTATTTCTCTCTCTATATATATCTCTATCTACAGTGGATTTTCTCTCTCCTCTCTCTCTCTTGCCGTTGCTGTTCGATACTGTTGTTGTCCTCTCGTGGCCATTATTAGATGGCCTCCTGCTGCTGAAATGTGAGTGAGAGCTTTGCTTTGCTTGCTTGCTGGCTGGCTGGCTGGCTAGCTGGGGGTTGGCTTCCCCTCATCCTCGTGCATCATCCACTGTGCTCGGCTCAGCTGTCTGCCCTGTTCTTGCTTTGGTGGTTGGACGGTTAGCATCTTCCTCCTCAAGCTGAGATCCTTCTTGACGCCATTGGAGGGGTCGCTGTCGCCTGCGTCCTTGAGCCTCCCTGCTTTTCTTTT      TC TCTCTCTCTCTCCTCGGCGAGGGAGACGACGACGACGGTGGCGGCGGCGATGCTGAGCTTCAAGCAGAGCCACGAGGGGTTCGGCCATGTCGCCGCCGCTGGAGCTGGACCGCAGCAGCAGC AGCAGCCGTGGTGGGCGGGGTCGCAGCTGCTGTACGGGGAGGCGTCGCCGGAGGAGGCGGCGCTGCGCGACGGCGGCCAGTTCCAGGTCGTGCCCGGAGGCCGCGCCGCGCTGGATCCGGCGGCGCCGGAGCCGGAGAAGACGGCGGTGCCGGCGATGCCCAAGAGAGGAGGAGGAGGAGGGGCTCCTGAGGTGCTGAAATTCTCGGTGTTTTCAGGTAATTTGGAGCCGGGAGATACAGGAGAGAAGAACAGAGAGCACTCTGCCACTATTGCAATGCAATCGCCGTTGCCAGAATACAACGGCCATTTCGAGCTTGGTCTTGGTCAATCCATGGTCTCTCCCAATTATCCTTGTATTGACCAATGCTATGGTCTTATGACCACCTACGCGATGAAATCAATGAGTGGCGGGCGAATGCTACTGCCGCTGAACGCGCCAGCCGATGCGCCGATCTATGTCAACGCGAAGCAGTACGAAGGCATCCTCCGCCGTCGCCGTGCCCGCGCCAAGGCCCAGAGGGAGAACAGGCTGGTCAAAGGCAGGAAGCCCTACCTCCACGAGTCGCGCCACCGCCACGCCATGCGCCGGGCCAGAGGCTCCGGCGGCCGCTTCCTCAACACCAAGAAAGAAGCCACCGCCGCCGGATGCGGCGGCAGCAGCAAGACGCCCCTCGCGTCCCTCGTCAGCCCCGCCGACGTAGCCCATCGTCCAGGCTCCGGCGGCCGCGCGTCCAGCCTCTCCGGCTCCGACGTGTCGTCGCCGGGAGGCGTCATGTACGACCACCACCGCCACGACGACGCCGACGCGGCGGACCACTACAACAGCATCGACCACCACCTCCGCACGCCGTTCTTCACCCCGCTCCCGATCATCATGGACAGCGGCGGCGGCGGCGGCGACCACGCCTCACACTCCGCCGCCGCCGTCGCCGCCCCCTTCAGGTGGGCGACGGCGGCCGGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGACAGCCTTGAGGCGGGGATCTCCAGGCGTGCCCAGAGCTGCTGCTGATCGATCACCATCAGCTTTGGCTGCCTGTAGGCAAATCATTCTTGGCTCTTTACTTGCATTGGGGTTCTTGCAAGCAACTCTCCTCGTCACCTACCAAAACTGTCCCTGAAACTTCTCTAGTGCTGGGGTCTCGATCAGGGATGATGATGTGATGGAGGAGAGGCTTACCCATATGCCTGTAAATTATGGTTAGTGTTCTGATTAAGCAACTAGTAGTACTTGGTAAT TACTGGCTATGAATTAGTAGTATGGACTC  TGGTGTCAGGTTGCTCTTTGTCTGAATAAACTGGAGTCGTTTGAAGCTTTGCAACAGCTGTGAGTGAAACTATGTGCT                                                                                                                    ]
[+] EMBL CB621766             [                                                                                                                                                                                                                                                              TCGCGGCCATTATTAGATGGCCTCCTGCTGCTGAAATGTGAGTGAGAGCTTTGCTTTGCTTGCTTGCTGGCTGGCT GC   CTAGCTGGGGGTTGGCTTCCCCTCATCCTCGTGCATCATCCACTGTGCTCGGCTCAGCTGTCTGCCCTGTTCTTGCTTTGGTGGTTGGACGGTTAGCATCTTCCTCCTCAAGCTGAGATCCTTCTTGACGCCATTGGAGGGGTCGCTGTCGCCTGCGTCCTTGAGCCTCCCTGCTTTTCTTTTTCTCTCTC TCTCTCTCTCTCCTCGGCGAGGGAGACGACGACGACGGTGGCGGCGGCGATGCTGAGCTTCAAGCAGAGCCACGAGGGGTTCGGCCATGTCGCCGCCGCTGGAGCTGGACCGCAGCAGCAGC AGCAGCCGTGGTGGGCGGGGTCGCAGCTGCTGTACGGGGAGGCGTCGCCGGAGGAGGCGGCGCTGCGCGACGGCGGCCAGTTCCAGGTCGTGCCCGGAGGCCGCGCCGCGCTGGATCCGGCGGCGCCGGAGCCGGAGAAGACGGCGGTGCCGGCGATGCCCAAGA   GAGGAGGAGGAGGGGCTCCTGAGGTGCTGAAATTCTCGGTGTTTTCAGGTAATTTGGAGCCGGGAGATACAGGAGAGAAGAACAGAGAGCACTCTGCCACTATTGCAATGCAATCGCCGTTGCCAGAATACAACGGCCATTTCGAGCTTGGTCTTGGTCAATCCATGGTCTCTCCCAACTATCCTTGTATTGACCAATGCTATGGTCTTATGACCACCTACGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C26968               [                                                                                                                                                                                                                                                                                                                                                       GGGGTTGGCTTCCCCTCATCCTCGTGCATCATCCACTGTGCTCGGCTCAGCTGTCTGCCCTGTTCTTGCTTTGGTGGTTGGACGGTTAGCATCTTCCTCCTCAAGCTGAGATCCTTCTTNACGCCATTGGAGGGGTCGCTGTCGCCTGCNTCCTTAAGCCTCCCTGCTTTTNTTTT      TC TCTCTCTCTCTCCTCGGCGAGGGAGACGACGACGACGGTGGCGGCGGCGATGCTGAGCTTCAAGCAGAGCCACGAGGGGTTCGGCCATGTCGCCGCCGCTGGAGCTGGACCGNAGCAGCAGCAAGCAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C26993               [                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAAGCTGAGATCCTTCTTNACGCCATTGGAGGGGTCGCTGTCGCCTGCNTCCTTAAGCCTCCCTGC TTTCTTTT      TCNTCTCTCTCTCTCCTCGGCGAGGGAGACGACGACGACGGTGGCGGCGGCNATGCTGAGCTTCAAGCAGAGCCACGAGGGGTTCGGCCATGTNGCCGCCGCTGGAGCTGGACCGCAGCAGCAGC AGCAGCCGTGGTGGGCGGGGTCGCANCTGCTGTACGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU176432             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGAGGCGTCATGTACGACCACCACCGCCACGACGACGCCGACGCGGCGGACCACTACAACAGCATCGACCACCACCTCCGCACGCCGTTCTTCACCCCGCTCCCGATCATCATGGACAGCGGCGGCGGCGGCGGCGACCACGCCTCACACTCCGCCGCCGCCGTCGCCGCCCCCTTCAGGTGGGCGACGGCGGCCGGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGACAGCCTTGAGGCGGGGATCTCCAGGCGTGCCCAGAGCTGCTGCTGATCGATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB621767             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GACGGCGGCCGGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGACAGCCTTGAGGCGGGGATCTCCAGGCGTGCCCAGAGCTGCTGCTGATCGATCACCATCAGCTTTGGCTGCCTGTAGGCAAATCATTCTTGGCTCTTTACTTGCATTGGGGTTCTTGCAAGCAACTCTCCTCGTCACCTACCAAAACTGTCCCTGAAACTTCTCTAGTGCTGGGGTCTCGATCAGGGATGATGATGTGATGGAGGAGAGGCTTACCCATATGCCTGTAAATTATGGTTAGTGTTCTGATTAAGCAACTAGTAGTACTTGGTAAT TACTGGCTATGAATTAGTAGTATGGACTCTGTGGTGTCAGGTTGCTCTTTGTCTGAATAAACTGGAGTCGTTTGAAGCTTTGCAACAGCTGTGAGTGAAACTATGTGCTTGCTTGCTTGCTTGTTGTTGGAGTGATTAAGCTGGAGTTTTGTCTGGTTTGGGTGTGTGAGACCAGTGAGATACTGTGACTGTCGATATCAATGTTGATGAATGATTTATGACCTT]
[-] EMBL D42581               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCAAGCAACTCTCCNCGTCACCTACCAAAACTGTCCCTGAAACTTCTCTAGTGCTGGGGTCTCGATCAGGGATGATGATGTGATGGAGGAGAGGCTTACCCATATGCCTGTAAATTATGGTTAGTGTTCTGATTAAGCAACTAGTAGTACTTGGTAATATACTGGCTATGAATTAGTAGTATGGACTC  TGGTGTNAGTATGCTCTTTGTCTNAATANACTGGAGTCGTTT                                                                                                                                                        ]




>consensus_9876#0
CAGTGGCAGCAGCCACCACTTTGCACAAAAGAAGCAAAGTAAATGGATGGCCATCGCCGT
TGAGGAAGGGTTGGTGGCCATCTAGAGAGAGAGAGAGAAACTAGAGAGAGAGAGGGGTGA
GCAGCTGAGCTCTGCATCTATATACAGCACTGCATCTCTCTCTATTTCTCTCTCTATATA
TATCTCTATCTACAGTGGATTTTCTCTCTCCTCTCTCTCTCTTGCCGTTGCTGTTCGATA
CTGTTGTTGTCCTCTCGTGGCCATTATTAGATGGCCTCCTGCTGCTGAAATGTGAGTGAG
AGCTTTGCTTTGCTTGCTTGCTGGCTGGCTGGCTGGCTAGCTGGGGGTTGGCTTCCCCTC
ATCCTCGTGCATCATCCACTGTGCTCGGCTCAGCTGTCTGCCCTGTTCTTGCTTTGGTGG
TTGGACGGTTAGCATCTTCCTCCTCAAGCTGAGATCCTTCTTGACGCCATTGGAGGGGTC
GCTGTCGCCTGCGTCCTTGAGCCTCCCTGCTTTTCTTTTTCTCTCTCTCTCTCCTCGGCG
AGGGAGACGACGACGACGGTGGCGGCGGCGATGCTGAGCTTCAAGCAGAGCCACGAGGGG
TTCGGCCATGTCGCCGCCGCTGGAGCTGGACCGCAGCAGCAGCAGCAGCCGTGGTGGGCG
GGGTCGCAGCTGCTGTACGGGGAGGCGTCGCCGGAGGAGGCGGCGCTGCGCGACGGCGGC
CAGTTCCAGGTCGTGCCCGGAGGCCGCGCCGCGCTGGATCCGGCGGCGCCGGAGCCGGAG
AAGACGGCGGTGCCGGCGATGCCCAAGAGAGGAGGAGGAGGAGGGGCTCCTGAGGTGCTG
AAATTCTCGGTGTTTTCAGGTAATTTGGAGCCGGGAGATACAGGAGAGAAGAACAGAGAG
CACTCTGCCACTATTGCAATGCAATCGCCGTTGCCAGAATACAACGGCCATTTCGAGCTT
GGTCTTGGTCAATCCATGGTCTCTCCCAATTATCCTTGTATTGACCAATGCTATGGTCTT
ATGACCACCTACGCGATGAAATCAATGAGTGGCGGGCGAATGCTACTGCCGCTGAACGCG
CCAGCCGATGCGCCGATCTATGTCAACGCGAAGCAGTACGAAGGCATCCTCCGCCGTCGC
CGTGCCCGCGCCAAGGCCCAGAGGGAGAACAGGCTGGTCAAAGGCAGGAAGCCCTACCTC
CACGAGTCGCGCCACCGCCACGCCATGCGCCGGGCCAGAGGCTCCGGCGGCCGCTTCCTC
AACACCAAGAAAGAAGCCACCGCCGCCGGATGCGGCGGCAGCAGCAAGACGCCCCTCGCG
TCCCTCGTCAGCCCCGCCGACGTAGCCCATCGTCCAGGCTCCGGCGGCCGCGCGTCCAGC
CTCTCCGGCTCCGACGTGTCGTCGCCGGGAGGCGTCATGTACGACCACCACCGCCACGAC
GACGCCGACGCGGCGGACCACTACAACAGCATCGACCACCACCTCCGCACGCCGTTCTTC
ACCCCGCTCCCGATCATCATGGACAGCGGCGGCGGCGGCGGCGACCACGCCTCACACTCC
GCCGCCGCCGTCGCCGCCCCCTTCAGGTGGGCGACGGCGGCCGGCGACGGCTGCTGCGAG
CTCCTCAAGGCGTGACAGCCTTGAGGCGGGGATCTCCAGGCGTGCCCAGAGCTGCTGCTG
ATCGATCACCATCAGCTTTGGCTGCCTGTAGGCAAATCATTCTTGGCTCTTTACTTGCAT
TGGGGTTCTTGCAAGCAACTCTCCTCGTCACCTACCAAAACTGTCCCTGAAACTTCTCTA
GTGCTGGGGTCTCGATCAGGGATGATGATGTGATGGAGGAGAGGCTTACCCATATGCCTG
TAAATTATGGTTAGTGTTCTGATTAAGCAACTAGTAGTACTTGGTAATTACTGGCTATGA
ATTAGTAGTATGGACTCTGGTGTCAGGTTGCTCTTTGTCTGAATAAACTGGAGTCGTTTG
AAGCTTTGCAACAGCTGTGAGTGAAACTATGTGCTTGCTTGCTTGCTTGTTGTTGGAGTG
ATTAAGCTGGAGTTTTGTCTGGTTTGGGTGTGTGAGACCAGTGAGATACTGTGACTGTCG
ATATCAATGTTGATGAATGATTTATGACCTT
clustalw multiple alignements is not computed in this case