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Oryza sativa
cluster # 9885 cluster # 9885       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9885#0 length = 2121 sequences # 2  
consensus_9885#1 length = 811 sequences # 2  
consensus_9885#2 length = 806 sequences # 3  

consensusID : consensus_9885#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2121
fasta sequence
                              [GACTGTCATATGAAGCTTAGAGGTAGGAGAAGACATGGCGATGGCGAAGGAACTTACTGTTGCGTAGGGCCGGTGAGACGTGCAGATGATGGTGATTGGAGACGATGAAAGGGGAGGAGCTCCGAGCGGGTAGAATTGCTCGGGGTCTTCTTGCTGGGTGGTGTGGTTGGACGGAGAAGAGATGGCAAGTATTTATAGGGGGATGAGATGGGTGAGGGTGAGGGGGAGGTCAATTGGTTTTCTTTAATGCAGCATTAAGAGTATAGCAGTACTACTACTACTTCATGTACTAGAGGCTAAGGAAGGACGCATTTTATTACCAAGGTATTCATGGCTGGAGAGTGGCATGGTAGGGGTTGAATAATCTGTGTTGGGTGGGAGAGAAGTGCGAGGTGAGAGGCTTTATGGTTGGTCATATACACAAGGCAAAGAAATGTTTTTTTTTCATTTATCTGAAAGAAGAAAATTTCCAGTGATGAATCTTCTCTTTTTTTTTCTTACTTCGGCGGTAGTTTTCTTTAGCCACATGCTAGATGACTGTGGCAATCTCCCAACAGTGAGCCTGGTTGAAAATTGTAACCCATGATAGGCATGTCTAGTTTAATTGTGCCAAAAGTTTGCTAGTGACTTAATTACCTCCAGTAGATTTTACAACTTTGTAGTGGCCATGTAAGCAAGTTAGCTGGACTTATTGGGTAATTATGACAATTATTTATTATTTTTAGGTGTGGAGTTGAAAGTTGAAACTCATCAACTATTTGTCCTTTTTGATTGCTTCTAAAGATTATAGAAATTTGACTGACCTCCAATTCATTTCACTACTTCAATGTGGCCTTGAATGGAATTTATTGGGCACACCATCTCAAATGCCCAGCATTGCTGTCAAAAAAAAAGGAGAGAAGAGAGAACTTGAATGTTGAGCCATGGTTATGTTAATCGAATAAATAGGTTTCTTGAATAGATATGCTGCTAGTGCACCTTATGCAATTAGGTCTTTAAATGGTGCAACGCAACACCTATGTTCTTGCACGCACCGATGCGTTGCTTCTGGTGCGCATCTTGATACAATGACGACGAGATAAGTAATACATTAATGCCACTTTGTTTGATGCACATAAGAGCAGCACTTTGAAATCTCAGCTCCGTTGGGGTTTTTCTTGTTTCCAGCTTGCAGTGTTTAAATGCCGAGAGCAGATATTAAATTCGTTAGTTGACTTGTTAGTGTTATGGAGATGTTGCATCCTGATTGTGTGACTTAATCACCTTACAATTAAGAAAAGGGTTAAACTTTGTAAAGTCATACTAGTATCAACCCACTAATGTAATCCCCGAGATTGCTTACATATCCCACCTTGATTAATGATGATGACATACAACTCACTTAAAGTTGTTTTGGTTTGTGTGTTGCATTGGGTTTGGTCAATGCTGCTACTCATCAAGGTTAAGAGATAGCCACCTGTAGAGAAAATAATTTGCCTCAGTTAGGACTAATTCTAGCATTAATGCTCCCGTTTTGGGCAAATAGAAGCAGTAATGGATGGTTTTGGGATCCAGAGCCAACGCTATCGGCCTCGGGATCAAAGGTTTGAGTTCAGTTTACCTGATTTTATAATATTTCACCACCATTCATCATGATTCATCGATGATGCGTCTAAAATTGCAGGTAAAGTCTCGGAGTTGAAGGCAACTATGAAGGCAAGGTTGACCCAAATGCGAGCTCATAACTGTGCCACTAGGTTATTGCTTAGTACAGGATATGGTATATAAATGTATCTTTGCACGTATATATTGCCATTAGTCGGTGTATGGGGGCCAAACCCATGTGCTCTTCTTTAATTCCATGGTGGCATCTAAGGAGCTTAATTAGAGATTATGAGTGAAAAATAATCTCCACTGAGTTTTCTCGCGCCTTCTTGTT-GTGGTTGCAAAGGCAATGAGCTCCAATGCAAAATAGTTGGATATATTGGCGATTTCGCATAAGGCACCAAGTTATTGGCAAAATTCACAATTTAATTACTTTTTAAACTCCAGCTGCTGNTCTAGTGGACTCTCTTGGTTGCTTGNCCTATTTTTGAGGGTATGTATTGATGAACACTATGATAGCTCTTTTGGAACGCATGA]

[+] EMBL AK109638             [GACTGTCATATGAAGCTTAGAGGTAGGAGAAGACATGGCGATGGCGAAGGAACTTACTGTTGCGTAGGGCCGGTGAGACGTGCAGATGATGGTGATTGGAGACGATGAAAGGGGAGGAGCTCCGAGCGGGTAGAATTGCTCGGGGTCTTCTTGCTGGGTGGTGTGGTTGGACGGAGAAGAGATGGCAAGTATTTATAGGGGGATGAGATGGGTGAGGGTGAGGGGGAGGTCAATTGGTTTTCTTTAATGCAGCATTAAGAGTATAGCAGTACTACTACTACTTCATGTACTAGAGGCTAAGGAAGGACGCATTTTATTACCAAGGTATTCATGGCTGGAGAGTGGCATGGTAGGGGTTGAATAATCTGTGTTGGGTGGGAGAGAAGTGCGAGGTGAGAGGCTTTATGGTTGGTCATATACACAAGGCAAAGAAATGTTTTTTTTTCATTTATCTGAAAGAAGAAAATTTCCAGTGATGAATCTTCTCTTTTTTTTTCTTACTTCGGCGGTAGTTTTCTTTAGCCACATGCTAGATGACTGTGGCAATCTCCCAACAGTGAGCCTGGTTGAAAATTGTAACCCATGATAGGCATGTCTAGTTTAATTGTGCCAAAAGTTTGCTAGTGACTTAATTACCTCCAGTAGATTTTACAACTTTGTAGTGGCCATGTAAGCAAGTTAGCTGGACTTATTGGGTAATTATGACAATTATTTATTATTTTTAGGTGTGGAGTTGAAAGTTGAAACTCATCAACTATTTGTCCTTTTTGATTGCTTCTAAAGATTATAGAAATTTGACTGACCTCCAATTCATTTCACTACTTCAATGTGGCCTTGAATGGAATTTATTGGGCACACCATCTCAAATGCCCAGCATTGCTGTCAAAAAAAAAGGAGAGAAGAGAGAACTTGAATGTTGAGCCATGGTTATGTTAATCGAATAAATAGGTTTCTTGAATAGATATGCTGCTAGTGCACCTTATGCAATTAGGTCTTTAAATGGTGCAACGCAACACCTATGTTCTTGCACGCACCGATGCGTTGCTTCTGGTGCGCATCTTGATACAATGACGACGAGATAAGTAATACATTAATGCCACTTTGTTTGATGCACATAAGAGCAGCACTTTGAAATCTCAGCTCCGTTGGGGTTTTTCTTGTTTCCAGCTTGCAGTGTTTAAATGCCGAGAGCAGATATTAAATTCGTTAGTTGACTTGTTAGTGTTATGGAGATGTTGCATCCTGATTGTGTGACTTAATCACCTTACAATTAAGAAAAGGGTTAAACTTTGTAAAGTCATACTAGTATCAACCCACTAATGTAATCCCCGAGATTGCTTACATATCCCACCTTGATTAATGATGATGACATACAACTCACTTAAAGTTGTTTTGGTTTGTGTGTTGCATTGGGTTTGGTCAATGCTGCTACTCATCAAGGTTAAGAGATAGCCACCTGTAGAGAAAATAATTTGCCTCAGTTAGGACTAATTCTAGCATTAATGCTCCCGTTTTGGGCAAATAGAAGCAGTAATGGATGGTTTTGGGATCCAGAGCCAACGCTATCGGCCTCGGGATCAAAGGTTTGAGTTCAGTTTACCTGATTTTATAATATTTCACCACCATTCATCATGATTCATCGATGATGCGTCTAAAATTGCAGGTAAAGTCTCGGAGTTGAAGGCAACTATGAAGGCAAGGTTGACCCAAATGCGAGCTCATAACTGTGCCACTAGGTTATTGCTTAGTACAGGATATGGTATATAAATGTATCTTTGCACGTATATATTGCCATTAGTCGGTGTATGGGGGCCAAACCCATGTGCTCTTCTTTAATTCCATGGTGGCATCTAAGGAGCTTAATTAGAGATTATGAGTGAAAAATAATCTCCACTGAGTTTTCTCGCGCCTTCTTGTT GTGGTTGCAAAGGCAATGAGCTCCAATGCAAA                                                                                                                                                                           ]
[+] EMBL CA765640             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  caaggggGGTCAATGCTGCTACTCATCAAGGTTAAGAGATAGCCACCTGTAGAGAAAATAATTTGCCTCAGTTAGGACTAATTCTAGCATTAATGCTCCCGTTTTGGGCAAATAGAAGCAGTAATGGATGGTTTTGGGATCCAGAGCCAATGCTATCGGCCTCGGGATCAAAGGTTTGAGTTCAGTTTACCTGATTTTATAATATTTCACCACCATTCATCATGATTCATCGATGATGCGTCTAAAATTGCAGGTAAAGTCTCGGAGTTGAAGGCAACTATGAAGGCAAGGTTGACCCAAATGCGAGCTCATAACTGTGCCACTAGGTTATTGCTTAGTACAGGATATGGTATATAAATGTATCTTTGCACGTATATATTGCCATTAGTCGGTGTATGGGGGCCAAACCCATGTGCTCTTCTTTAATTCCATGGTGGCATCTAAGGAGCTTAATTAGAGATTATGAGTGAAAAATAATCTCCACTGAGTTTTCTCGCGCCTTCTTGTTGGTGGTTGCAAAGGCAATGAGCTCCAATGCAAAATAGTTGGATATATTGGCGATTTCGCATAAGGCACCAAGTTATTGGCAAAATTCACAATTTAATTACTTTTTAAACTCCAGCTGCTGNTCTAGTGGACTCTCTTGGTTGCTTGNCCTATTTTTGAGGGTATGTATTGATGAACACTATGATAGCTCTTTTGGAACGCATGA]


>consensus_9885#0 GACTGTCATATGAAGCTTAGAGGTAGGAGAAGACATGGCGATGGCGAAGGAACTTACTGT TGCGTAGGGCCGGTGAGACGTGCAGATGATGGTGATTGGAGACGATGAAAGGGGAGGAGC TCCGAGCGGGTAGAATTGCTCGGGGTCTTCTTGCTGGGTGGTGTGGTTGGACGGAGAAGA GATGGCAAGTATTTATAGGGGGATGAGATGGGTGAGGGTGAGGGGGAGGTCAATTGGTTT TCTTTAATGCAGCATTAAGAGTATAGCAGTACTACTACTACTTCATGTACTAGAGGCTAA GGAAGGACGCATTTTATTACCAAGGTATTCATGGCTGGAGAGTGGCATGGTAGGGGTTGA ATAATCTGTGTTGGGTGGGAGAGAAGTGCGAGGTGAGAGGCTTTATGGTTGGTCATATAC ACAAGGCAAAGAAATGTTTTTTTTTCATTTATCTGAAAGAAGAAAATTTCCAGTGATGAA TCTTCTCTTTTTTTTTCTTACTTCGGCGGTAGTTTTCTTTAGCCACATGCTAGATGACTG TGGCAATCTCCCAACAGTGAGCCTGGTTGAAAATTGTAACCCATGATAGGCATGTCTAGT TTAATTGTGCCAAAAGTTTGCTAGTGACTTAATTACCTCCAGTAGATTTTACAACTTTGT AGTGGCCATGTAAGCAAGTTAGCTGGACTTATTGGGTAATTATGACAATTATTTATTATT TTTAGGTGTGGAGTTGAAAGTTGAAACTCATCAACTATTTGTCCTTTTTGATTGCTTCTA AAGATTATAGAAATTTGACTGACCTCCAATTCATTTCACTACTTCAATGTGGCCTTGAAT GGAATTTATTGGGCACACCATCTCAAATGCCCAGCATTGCTGTCAAAAAAAAAGGAGAGA AGAGAGAACTTGAATGTTGAGCCATGGTTATGTTAATCGAATAAATAGGTTTCTTGAATA GATATGCTGCTAGTGCACCTTATGCAATTAGGTCTTTAAATGGTGCAACGCAACACCTAT GTTCTTGCACGCACCGATGCGTTGCTTCTGGTGCGCATCTTGATACAATGACGACGAGAT AAGTAATACATTAATGCCACTTTGTTTGATGCACATAAGAGCAGCACTTTGAAATCTCAG CTCCGTTGGGGTTTTTCTTGTTTCCAGCTTGCAGTGTTTAAATGCCGAGAGCAGATATTA AATTCGTTAGTTGACTTGTTAGTGTTATGGAGATGTTGCATCCTGATTGTGTGACTTAAT CACCTTACAATTAAGAAAAGGGTTAAACTTTGTAAAGTCATACTAGTATCAACCCACTAA TGTAATCCCCGAGATTGCTTACATATCCCACCTTGATTAATGATGATGACATACAACTCA CTTAAAGTTGTTTTGGTTTGTGTGTTGCATTGGGTTTGGTCAATGCTGCTACTCATCAAG GTTAAGAGATAGCCACCTGTAGAGAAAATAATTTGCCTCAGTTAGGACTAATTCTAGCAT TAATGCTCCCGTTTTGGGCAAATAGAAGCAGTAATGGATGGTTTTGGGATCCAGAGCCAA CGCTATCGGCCTCGGGATCAAAGGTTTGAGTTCAGTTTACCTGATTTTATAATATTTCAC CACCATTCATCATGATTCATCGATGATGCGTCTAAAATTGCAGGTAAAGTCTCGGAGTTG AAGGCAACTATGAAGGCAAGGTTGACCCAAATGCGAGCTCATAACTGTGCCACTAGGTTA TTGCTTAGTACAGGATATGGTATATAAATGTATCTTTGCACGTATATATTGCCATTAGTC GGTGTATGGGGGCCAAACCCATGTGCTCTTCTTTAATTCCATGGTGGCATCTAAGGAGCT TAATTAGAGATTATGAGTGAAAAATAATCTCCACTGAGTTTTCTCGCGCCTTCTTGTTGT GGTTGCAAAGGCAATGAGCTCCAATGCAAAATAGTTGGATATATTGGCGATTTCGCATAA GGCACCAAGTTATTGGCAAAATTCACAATTTAATTACTTTTTAAACTCCAGCTGCTGNTC TAGTGGACTCTCTTGGTTGCTTGNCCTATTTTTGAGGGTATGTATTGATGAACACTATGA TAGCTCTTTTGGAACGCATGA



consensusID : consensus_9885#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 811
fasta sequence
                              [ACCCCGAGCAATTCTACCCGCTCGGAGCTCCTCCCCTTTCATCGTCTCCAATCACCATCATCTGCACGTCTCACCGGCCCTACGCAACAGCAAGTGGGTTACCTCTCGATCGGGATGAGCCGCAGCAACAAGAAGAGCTCTAGGGGCATCGACCTGAAGCTGAACCTCTCGCTGCCGGCGAGAGGGGACTCGTCGTCCAGGAGGGCGATGGCCGCCGACGAGGAGTCGTCGCCGAGCTCGTGCCTGTCGTCGGAGAACGAGCACGGCCTGCAGTGGTCCAACAGCCCGGAGGCGACGTCCATGGTGCTCGCCGCCTGCCCTCGCTGCTTCATCTACGTCATGCTCCCGCAGGATGATCCGCGGTGCCCGCAGTGCAAGAGCCCCGTGATCCTTGACTTCCTGCAGCAGGACAACGGCAACAACAACGCCAACAGCAATAGCAGCAGGAAGACCAGGAGAGGGTGAAGTTAAACAAAAGGGGGGGCAATTCTCCGTTTGGCAGAAGATCAACATCAATCAAGAAAAAGAAAAGCGTCTATATGAAGTCCTAGGTCCAGTAATTCTCTTTTGTTTTGCCTATTCCCCCAGTGTAACCATGATATATTCCTTACTAAAATTGTGAGACTAGCATGAAAATCCATGTGCTGGTGGCATAATTTTGATACATCATGGATACACTGGGGACTATATCCATCCCCCTCTCCTGGCTTCCTTCTTTAGTGGTTCTAAATGAAGAAGTTTTGCTTAGACATAGGACCAGACTTCTCATCTTTGTTTTGTTTTTGTTTCCTTTCCGAGATGAAAAGAAAAC]

[+] EMBL AK108662             [ACCCCGAGCAATTCTACCCGCTCGGAGCTCCTCCCCTTTCATCGTCTCCAATCACCATCATCTGCACGTCTCACCGGCCCTACGCAACAGCAAGTGGGTTACCTCTCGATCGGGATGAGCCGCAGCAACAAGAAGAGCTCTAGGGGCATCGACCTGAAGCTGAACCTCTCGCTGCCGGCGAGAGGGGACTCGTCGTCCAGGAGGGCGATGGCCGCCGACGAGGAGTCGTCGCCGAGCTCGTGCCTGTCGTCGGAGAACGAGCACGGCCTGCAGTGGTCCAACAGCCCGGAGGCGACGTCCATGGTGCTCGCCGCCTGCCCTCGCTGCTTCATCTACGTCATGCTCCCGCAGGATGATCCGCGGTGCCCGCAGTGCAAGAGCCCCGTGATCCTTGACTTCCTGCAGCAGGACAACGGCAACAACAACGCCAACAGCAATAGCAGCAGGAAGACCAGGAGAGGGTGAAGTTAAACAAAAGGGGGGGCAATTCTCCGTTTGGCAGAAGATCAACATCAATCAAGAAAAAGAAAAGCGTCTATATGAAGTCCTAGGTCCAGTAATTCTCTTTTGTTTTGCCTATTCCCCCAGTGTAACCATGATATATTCCTTACTAAAATTGTGAGACTAGCATGAAAATCCATGTGCTGGTGGCATAATTTTGATACATCATGGATACACTGGGGACTATATCCATCCCCCTCTCCTGGCTTCCTTCTTTAGTGGTTCTAAATGAAGAAGTTTTGCTTAGACATAGGACCAGACTTCTCATCTTTGTTTTGTTTTTGTTTCCTTTCCGAGATGAAAAGAAAAC]
[+] EMBL CF291494             [  CCCGAGCAATTCTACCCGCTCGGAGCTCCTCCCCTTTCATCGTCTCCAATCACCATCATCTGCACGTCTCACCGGCCCTACGCAACAGCAAGTGGGTTACCTCTCGATCGGGATGAGCCGCAGCAACAAGAAGAGCTCTAGGGGCATCGACCTGAAGCTGAACCTCTCGCTGCCGGCGAGAGGGGACTCGTCGTCCAGGAGGGCGATGGCCGCCGACGGGGAGTCGTCGCCGAGCTCGTGCCTGTCGTCGGAGAACGAGCACGGCCTGCAGTGGTCCAACAGCCCGGAGGCGACGTCCATGGTGCTCGCCGCCTGCCCTCGCTGCTTCATCTACGTCATGCTCCCGAAGGATGATCCGCGGTGCCCGCAGTGCAAGAGCCCCGTGATCCTTGACTTCCTGCAGCAGGACAACGGCAACAACAACGCCAACAGCAATAG                                                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_9885#1 ACCCCGAGCAATTCTACCCGCTCGGAGCTCCTCCCCTTTCATCGTCTCCAATCACCATCA TCTGCACGTCTCACCGGCCCTACGCAACAGCAAGTGGGTTACCTCTCGATCGGGATGAGC CGCAGCAACAAGAAGAGCTCTAGGGGCATCGACCTGAAGCTGAACCTCTCGCTGCCGGCG AGAGGGGACTCGTCGTCCAGGAGGGCGATGGCCGCCGACGAGGAGTCGTCGCCGAGCTCG TGCCTGTCGTCGGAGAACGAGCACGGCCTGCAGTGGTCCAACAGCCCGGAGGCGACGTCC ATGGTGCTCGCCGCCTGCCCTCGCTGCTTCATCTACGTCATGCTCCCGCAGGATGATCCG CGGTGCCCGCAGTGCAAGAGCCCCGTGATCCTTGACTTCCTGCAGCAGGACAACGGCAAC AACAACGCCAACAGCAATAGCAGCAGGAAGACCAGGAGAGGGTGAAGTTAAACAAAAGGG GGGGCAATTCTCCGTTTGGCAGAAGATCAACATCAATCAAGAAAAAGAAAAGCGTCTATA TGAAGTCCTAGGTCCAGTAATTCTCTTTTGTTTTGCCTATTCCCCCAGTGTAACCATGAT ATATTCCTTACTAAAATTGTGAGACTAGCATGAAAATCCATGTGCTGGTGGCATAATTTT GATACATCATGGATACACTGGGGACTATATCCATCCCCCTCTCCTGGCTTCCTTCTTTAG TGGTTCTAAATGAAGAAGTTTTGCTTAGACATAGGACCAGACTTCTCATCTTTGTTTTGT TTTTGTTTCCTTTCCGAGATGAAAAGAAAAC



consensusID : consensus_9885#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 806
fasta sequence
                              [TTTTTATGGGGGTGTAGGCAAGTGGGTTACCTCTCGATCGGGATGAGCCGCAGCAACAAGAAGAGCTCTAGGGGCATCGACCTGAAGCTGAACCTCTCGCTGCCGGCGAGAGGGGACTCGTCGTCCAGGAGGGCGATGGCCGCCGACGAGGAGTCGTCGCCGAGCTCGTGCCTGTCGTCGGAGAACGAGCACGGCCTGCAGTGGTCCAACAGCCCGGAGGCGACGTCCATGGTGCTCGCCGCCTGCCCTCGCTGCTTCATCTACGTCATGCTCCCGCAGGATGATCCGCGGTGCCCGCAGTGCAAGAGCCCCGTGATCCTTGACTTCCTGCAGCAGGACAACGGCAACAACAACGCCAACAGCAATAGCAGCAGGAAGACCAGGAGAGGGTGAAGTTAAACAAAAGGGGGGGCAATTCTCCGTTTGGCAGAAGATCAACATCAATCAAGAAAAAGAAAAGCGTCTATATGAAGTCCTAGGTCCAGTAATTCTCTTTTGTTTTGCCTATTCCCCCAGTGTAACCATGATATATTCCTTACTAAAATTGTGAGACTAGCATGAAAATCCATGTGCTGGTGGCATAATTTTGATACATCATGGATACACTGGGGACTATATCCATCCCCCCTCTCCTGGCTTCCTTCTTTAGTGGTTCTAAATGAAGAAGTTTTGCTTAGACATAGGACCAGACTTCTCATCTTTGTTTTGTTTTTGTTTCCTTTCCGAGATGAAAAGAAAACATTTACCCTGAAAATGTTGAGATGATTATTGTTCTGAATCACATGATGGCTTTCTATCAAAAAAAA]

[+] EMBL CF296722             [TTTTTATGGGGGTGTAGGCAAGTGGGTTACCTCTCGATCGGGATGAGCCGCAGCAACAAGAAGAGCTCTAGGGGCATCGACCTGAAGCTGAACCTCTCGCTGCCGGCGAGAGGGGACTCGTCGTCCAGGAGGGCGATGGCCGCCGACGAGGAGTCGTCGCCGAGCTCGTGCCTGTCGTCGGAGAACGAGCACGGCCTGCAGTGGTCCAACAGCCCGGAGGCGACGTCCATGGTGCTCGCCGCCTGCCCTCGCTGCTTCATCTACGTCATGCTCCCGCAGGATGATCCGCGGTGCCCGCAGTGCAAGAGCCCCGTGATCCTTGACTTCCTGCAGCAGGACAACGGCAACAACAACGCCAACAGCAATAGCAGCAGGAAGACCAGGAGAGGGTGAAGTTAAACAAAAGGGGGGGCAATTCTCCGTTTGGCAGAAGATCAACATCAATCAAGAAAAAGAAAAGCGTCTATATGAAGTCCTAGGTCCAGTAATTCTCTTTTGTTTTGCCTATTCCCCCAGTGTAACCATGATATATTCCTTACTAAAATTGTGAGACTAGCATGAAAAT                                                                                                                                                                                                                                                 ]
[-] EMBL CF296723             [                                                                                                                                                                                                                                                                                CCCGCAGGATGATCCGCGGTGCCCGCAGTGCAAGAGCCCCGTGATCCTTGACTTCCTGCAGCAGGACAACGGCAACAACAACGCCAACAGCAATAGCAGCAGGAAGACCAGGAGAGGGTGAAGTTAAACAAAAGGGGGGGCAATTCTCCGTTTGGCAGAAGATCAACATCAATCAAGAAAAAGAAAAGCGTCTATATGAAGTCCTAGGTCCAGTAATTCTCTTTTGTTTTGCCTATTCCCCCAGTGTAACCATGATATATTCCTTACTAAAATTGTGAGACTAGCATGAAAATCCATGTGCTGGTGGCATAATTTTGATACATCATGGATACACTGGGGACTATATCCATCCCCCCTCTCCTGGCTTCCTTCTTTAGTGGTTCTAAATGAAGAAGTTTTGCTTAGACATAGGACCAGACTTCTCATCTTTGTTTTGTTTTTGTTTCCTTTCCGAGATGAAAAGAAAACATTTACCCTGAAAATGTTGAGATGATTATTGTTCTGAATCACATGATGGCTTTCTATCAAAAA   ]
[+] EMBL AU174891             [                                                                                                                                                                                                                                                                                                                                                                   CCAACAGCAATAGCAGCAGGAAGACCAGGAGAGGGTGAAGTTAAACAAAAGGGGGGGCAATTCTCCGTTTGGCAGAAGATCAACATCAATCAAGAAAAAGAAAAGCGTCTATATGAAGTCCTAGGTCCAGTAATTCTCTTTTGTTTTGCCTATTCCCCCAGTGTAACCATGATATATTCCTTACTAAAATTGTGAGACTAGCATGAAAATCCATGTGCTGGTGGCATAATTTTGATACATCATGGATACACTGGGGACTATATCCAT CCCCCTCTCCTGGCTTCCTTCTTTAGTGGTTCTAAATGAAGAAGTTTTGCTTAGACATAGGACCAGACTTCTCATCTTTGTTTTGTTTTTGTTTCCTTTCCGAGATGAAAAGAAAACATTTACCCTGAAAATGTTGAGATGATTATTGTTNTGAATCACATGATGGCTTTCTATCAAAAAAAA]


>consensus_9885#2 TTTTTATGGGGGTGTAGGCAAGTGGGTTACCTCTCGATCGGGATGAGCCGCAGCAACAAG AAGAGCTCTAGGGGCATCGACCTGAAGCTGAACCTCTCGCTGCCGGCGAGAGGGGACTCG TCGTCCAGGAGGGCGATGGCCGCCGACGAGGAGTCGTCGCCGAGCTCGTGCCTGTCGTCG GAGAACGAGCACGGCCTGCAGTGGTCCAACAGCCCGGAGGCGACGTCCATGGTGCTCGCC GCCTGCCCTCGCTGCTTCATCTACGTCATGCTCCCGCAGGATGATCCGCGGTGCCCGCAG TGCAAGAGCCCCGTGATCCTTGACTTCCTGCAGCAGGACAACGGCAACAACAACGCCAAC AGCAATAGCAGCAGGAAGACCAGGAGAGGGTGAAGTTAAACAAAAGGGGGGGCAATTCTC CGTTTGGCAGAAGATCAACATCAATCAAGAAAAAGAAAAGCGTCTATATGAAGTCCTAGG TCCAGTAATTCTCTTTTGTTTTGCCTATTCCCCCAGTGTAACCATGATATATTCCTTACT AAAATTGTGAGACTAGCATGAAAATCCATGTGCTGGTGGCATAATTTTGATACATCATGG ATACACTGGGGACTATATCCATCCCCCCTCTCCTGGCTTCCTTCTTTAGTGGTTCTAAAT GAAGAAGTTTTGCTTAGACATAGGACCAGACTTCTCATCTTTGTTTTGTTTTTGTTTCCT TTCCGAGATGAAAAGAAAACATTTACCCTGAAAATGTTGAGATGATTATTGTTCTGAATC ACATGATGGCTTTCTATCAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      GACTGTCATATGAAGCTTAGAGGTAGGAGAAGACATGGCGATGGCGAAGGAACTTACTGT 60
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      TGCGTAGGGCCGGTGAGACGTGCAGATGATGGTGATTGGAGACGATGAAAGGGGAGGAGC 120
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      TCCGAGCGGGTAGAATTGCTCGGGGTCTTCTTGCTGGGTGGTGTGGTTGGACGGAGAAGA 180
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      GATGGCAAGTATTTATAGGGGGATGAGATGGGTGAGGGTGAGGGGGAGGTCAATTGGTTT 240
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      TCTTTAATGCAGCATTAAGAGTATAGCAGTACTACTACTACTTCATGTACTAGAGGCTAA 300
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      GGAAGGACGCATTTTATTACCAAGGTATTCATGGCTGGAGAGTGGCATGGTAGGGGTTGA 360
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      ATAATCTGTGTTGGGTGGGAGAGAAGTGCGAGGTGAGAGGCTTTATGGTTGGTCATATAC 420
                                                                                  

consensus_9885#1      -------------------------ACCCCGAGCAATTCTACCCGCTCGGAGCTCCTCCC 35
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      ACAAGGCAAAGAAATGTTTTTTTTTCATTTATCTGAAAGAAGAAAATTTCCAGTGATGAA 480
                                                                                  

consensus_9885#1      CTTTCATCGTCTCCAATCACCATCATCTGCACGTCTCACCGGCCCTACGCAACAGCAAGT 95
consensus_9885#2      --------------------------------TTTTTATGGGG-----GTGTAGGCAAGT 23
consensus_9885#0      TCTTCTCTTTTTTTTTCTTACTTCGGCGGTAGTTTTCTTTAGCCACATGC-TAGATGACT 539
                                                       * *     *      *        * *

consensus_9885#1      G-GGTTACCTCTCGATCGGGATGAGCCGCAGCAACAAGAAGAGCTCTAGGGGCATCGACC 154
consensus_9885#2      G-GGTTACCTCTCGATCGGGATGAGCCGCAGCAACAAGAAGAGCTCTAGGGGCATCGACC 82
consensus_9885#0      GTGGCAATCTCCCAACAG---TGAGCCTGGTTGAAAATTGTAACCCATGATAGGCATGTC 596
                      * **  * *** * *  *   ******      * **    * * *  *          *

consensus_9885#1      TGAAGCTGAACCTCTCGCTGCCGGCGAGAGGGGACTCGTCGTCCAGGAGGGCGATGGCCG 214
consensus_9885#2      TGAAGCTGAACCTCTCGCTGCCGGCGAGAGGGGACTCGTCGTCCAGGAGGGCGATGGCCG 142
consensus_9885#0      TAGTTTAATTGTGCCAAAAGTTTGCTAGTGACTTAATTACCTCCAGTAGATTTTACAACT 656
                      *            *     *   ** ** *         * ***** **         * 

consensus_9885#1      CCGACGAGGAGTCGTCGCCGAGCTCGTGCCTGTCGTCGGAGAACGAGCACGGCCTGCAGT 274
consensus_9885#2      CCGACGAGGAGTCGTCGCCGAGCTCGTGCCTGTCGTCGGAGAACGAGCACGGCCTGCAGT 202
consensus_9885#0      TTGTAGTGGCCATGTAAGCAAGTTAGCTGGACTTATTGGGTAATTATGACAATTATTTAT 716
                        *  * **    **   * ** * *      *  * **  **  *  **         *

consensus_9885#1      GGTCCAACAGCCCGGAGGCGACGTCCATGGTGCTCGCCGCCTGCCCTCGCTGCTTCAT-- 332
consensus_9885#2      GGTCCAACAGCCCGGAGGCGACGTCCATGGTGCTCGCCGCCTGCCCTCGCTGCTTCAT-- 260
consensus_9885#0      TATTTTTAGGTGTGGAGTTGAAAGT--TGAAACTCATCAACTATTTGTCCTTTTTGATTG 774
                        *      *   ****  **      **   ***  *  **       **  ** **  

consensus_9885#1      CTACGTCATGCTCCCGCAGGATGATCCGCGGTGCCCGCAGTGCAAGAGCCCCGTG-ATCC 391
consensus_9885#2      CTACGTCATGCTCCCGCAGGATGATCCGCGGTGCCCGCAGTGCAAGAGCCCCGTG-ATCC 319
consensus_9885#0      CTTCTAAAGATTATAGAAATTTGACTGACCTCCAATTCATTTCACTACTTCAATGTGGCC 834
                      ** *   *   *   * *   ***    *        ** * **  *   *  **   **

consensus_9885#1      TTGACTTCCTGCAGCAGGACAACGGCAACAACAACGCCAACAGCAATAGCAGCAGGAAGA 451
consensus_9885#2      TTGACTTCCTGCAGCAGGACAACGGCAACAACAACGCCAACAGCAATAGCAGCAGGAAGA 379
consensus_9885#0      TTGAATGGAATTTATTGGGCA-CACCATCTCAAATGCCCAGCATTGCTGTCAAAAAAAAA 893
                      **** *          ** ** *  ** *   ** *** *        *    *  ** *

consensus_9885#1      CCAGGAGAGGGTGAAGTTAAACAAAAGGGGGGGCAATTCTCCGTTTGGCAGAAGATCAAC 511
consensus_9885#2      CCAGGAGAGGGTGAAGTTAAACAAAAGGGGGGGCAATTCTCCGTTTGGCAGAAGATCAAC 439
consensus_9885#0      GGAGAGAAGAGAGAACTTGAATGTTGAGCCATGGTTATGTTAATCGAATAAATAGGTTTC 953
                        **   ** * *** ** **      *    *    * *   *     * *       *

consensus_9885#1      ATCAATCAAGAAAAAGAAAAGCGTCTATATGAAGTCCTAGGTCCAGTAATTCTCTTTTGT 571
consensus_9885#2      ATCAATCAAGAAAAAGAAAAGCGTCTATATGAAGTCCTAGGTCCAGTAATTCTCTTTTGT 499
consensus_9885#0      TTGAATAGATATGCTGCTAGTGCACCTTATGCAAT--TAGGTCTTTAAATGGTGCAACGC 1011
                       * ***  * *    *  *     *  **** * *  ******    ***  *     * 

consensus_9885#1      TTTGCCTATTCCCCCA-GTGTAACCATGATATATTCCTTACTAAAATTGTGAGACTA--- 627
consensus_9885#2      TTTGCCTATTCCCCCA-GTGTAACCATGATATATTCCTTACTAAAATTGTGAGACTA--- 555
consensus_9885#0      AACACCTATGTTCTTGCACGCACCGATGCGTTGCTTCTGGTGCGCATCTTGATACAATGA 1071
                          *****   *      * * * ***   *  * **       **  *** ** *   

consensus_9885#1      --GCATGAAAATCCATGTGCTGGTGGCATAAT-TTTGAT--ACATCATGGATACACTGGG 682
consensus_9885#2      --GCATGAAAATCCATGTGCTGGTGGCATAAT-TTTGAT--ACATCATGGATACACTGGG 610
consensus_9885#0      CGACGAGATAAGTAATACATTAATGCCACTTTGTTTGATGCACATAAGAGCAGCACTTTG 1131
                         *  ** **   **    *  ** **   * ******  **** *  *   ****  *

consensus_9885#1      GACTATA---TCCATCCCCC-TCTCCTGGCTTCCTTCTT-TAGTGGTTCTAAATGAAGAA 737
consensus_9885#2      GACTATA---TCCATCCCCCCTCTCCTGGCTTCCTTCTT-TAGTGGTTCTAAATGAAGAA 666
consensus_9885#0      AAATCTCAGCTCCGTTGGGGTTTTTCTTGTTTCCAGCTTGCAGTG--TTTAAATGCCGAG 1189
                       * * *    *** *      * * ** * ****  ***  ****  * ******  ** 

consensus_9885#1      GTTTTGC-TTAGACATAGGACCAGACTTCTCATCTTTGTTTTGTTTTTGTTTCCTTTCCG 796
consensus_9885#2      GTTTTGC-TTAGACATAGGACCAGACTTCTCATCTTTGTTTTGTTTTTGTTTCCTTTCCG 725
consensus_9885#0      AGCAGATATTAAATTCGTTAGTTGACTTGTTAGTGTTATGGAGATGTTGCATCCTGATTG 1249
                              *** *      *   ***** * *   ** *   * * ***  ****    *

consensus_9885#1      AGATGAAAAGAAAAC--------------------------------------------- 811
consensus_9885#2      AGATGAAAAGAAAACATTTACCCTGAAAATGTTGAGATGATTATTGTTCTGAATCACATG 785
consensus_9885#0      TG-TGACTTAATCACCTTACAATTAAGAAAAGGGTTAAACTTTGTAAAGTCATACTAGTA 1308
                       * ***    *  **                                             

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ATGGCTTTCTATCAAAAAAAA--------------------------------------- 806
consensus_9885#0      TCAACCCACTAATGTAATCCCCGAGATTGCTTACATATCCCACCTTGATTAATGATGATG 1368
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      ACATACAACTCACTTAAAGTTGTTTTGGTTTGTGTGTTGCATTGGGTTTGGTCAATGCTG 1428
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      CTACTCATCAAGGTTAAGAGATAGCCACCTGTAGAGAAAATAATTTGCCTCAGTTAGGAC 1488
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      TAATTCTAGCATTAATGCTCCCGTTTTGGGCAAATAGAAGCAGTAATGGATGGTTTTGGG 1548
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      ATCCAGAGCCAACGCTATCGGCCTCGGGATCAAAGGTTTGAGTTCAGTTTACCTGATTTT 1608
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      ATAATATTTCACCACCATTCATCATGATTCATCGATGATGCGTCTAAAATTGCAGGTAAA 1668
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      GTCTCGGAGTTGAAGGCAACTATGAAGGCAAGGTTGACCCAAATGCGAGCTCATAACTGT 1728
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      GCCACTAGGTTATTGCTTAGTACAGGATATGGTATATAAATGTATCTTTGCACGTATATA 1788
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      TTGCCATTAGTCGGTGTATGGGGGCCAAACCCATGTGCTCTTCTTTAATTCCATGGTGGC 1848
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      ATCTAAGGAGCTTAATTAGAGATTATGAGTGAAAAATAATCTCCACTGAGTTTTCTCGCG 1908
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      CCTTCTTGTTGTGGTTGCAAAGGCAATGAGCTCCAATGCAAAATAGTTGGATATATTGGC 1968
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      GATTTCGCATAAGGCACCAAGTTATTGGCAAAATTCACAATTTAATTACTTTTTAAACTC 2028
                                                                                  

consensus_9885#1      ------------------------------------------------------------
consensus_9885#2      ------------------------------------------------------------
consensus_9885#0      CAGCTGCTGNTCTAGTGGACTCTCTTGGTTGCTTGNCCTATTTTTGAGGGTATGTATTGA 2088
                                                                                  

consensus_9885#1      ---------------------------------
consensus_9885#2      ---------------------------------
consensus_9885#0      TGAACACTATGATAGCTCTTTTGGAACGCATGA 2121
                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)