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Oryza sativa
cluster # 9886 cluster # 9886       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9886#0 length = 2012 sequences # 7  

consensusID : consensus_9886#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2012
fasta sequence
                              [CTTCCTGCCTTGCCTCCTCGTCTCCTTCTCTGCTGCTCTCCAAGCTCTTCCTGCTTCCATCAGGTTGTCTCGAGAAAGATTGGAGTTTTTGGTGGTTTGGGTTGTGCGGTTCTTGCTTTTGTTGGCGCAAGCGCATGGCTGGTTCTGGGACATAGTGAGCTGAGATAGAGTTCTTGTGTTCGGTGGAGTTTGGCTTTGGTGAATCTTCGATTCAAGTCTGGAGATGGCGCGTTTTCAGGAAACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTTGGGCACCGAAACCTCATGGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATGATGGACGAAGCGCGAATTCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAGAAATGGACCGAGGACGAACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCCTGGCGACGCATCCAAGAGCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCACAGAAGTTCTTCTCCAAGGTCATCAAAGAATCATCTGGGGACAATTGCAACAGCTT-GGGTGCTGCATCATCAATTCAGATTCCCCCGCCGCGGCCGAAGCGTAAGCCTGTTCATCCGTACCCACGCAATCTAGGGAGCACAGCCAGCAAGAACGTCCCTGCACTGAAACAGCTAGAGAAGCCTCAGCTGCAGGTGCAGTCTCTCTACGACCAGGACAATGGGTCGCCGACGTCAGTGTTAACAGTACCACAGATACGGGCTGATACACTGGGAAGTGAGAGTGGTGGGTCGCCAACCTCGACGATTGATATTGAAGAGAGATGTCCTACACCAAGCATAGCAACTGCTGAGTTAGCTATGGAGTTGCCTCCTACAAATGACGAGGAGGTCAAGGGCAATGGCGATCATGAAGAAGTTACATGTGACAGATCAGGAGTTCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGATTTACATCAGATGTCAGCCCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTGGACGCTTCAGCTGAGACACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCAGAAGCAAATACATGGAACCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCTAACGGACAAATTTTCTCCGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGTGTTACTTGCACCCAG-TTTT--CAAACCCACAGGTGGTAGCCTCAGATCAGCAGCATCAACACCAAACTTCTGAAGCTGTAGATTACAAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCAAATACATCCTCAAGCAGTGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCATATAGAAACGGAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGATAGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGG-CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAAAGAAAACAACGTTGGAAAGCTTTGTTCAAAAA]

[+] EMBL AK101209             [CTTCCTGCCTTGCCTCCTCGTCTCCTTCTCTGCTGCTCTCCAAGCTCTTCCTGCTTCCATCAGGTTGTCTCGAGAAAGATTGGAGTTTTTGGTGGTTTGGGTTGTGCGGTTCTTGCTTTTGTTGGCGCAAGCGCATGGCTGGTTCTGGGACATAGTGAGCTGAGATAGAGTTCTTGTGTTCGGTGGAGTTTGGCTTTGGTGAATCTTCGATTCAAGTCTGGAGATGGCGCGTTTTCAGGAAACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTTGGGCACCGAAACCTCATGGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATGATGGACGAAGCGCGAATTCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAGAAATGGACCGAGGACGAACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCCTGGCGACGCATCCAAGAGCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCACAGAAGTTCTTCTCCAAGGTCATCAAAGAATCATCTGGGGACAATTGCAACAGCTT GGGTGCTGCATCATCAATTCAGATTCCCCCGCCGCGGCCGAAGCGTAAGCCTGTTCATCCGTACCCACGCAATCTAGGGAGCACAGCCAGCAAGAACGTCCCTGCACTGAAACAGCTAGAGAAGCCTCAGCTGCAGGTGCAGTCTCTCTACGACCAGGACAATGGGTCGCCGACGTCAGTGTTAACAGTACCACAGATACGGGCTGATACACTGGGAAGTGAGAGTGGTGGGTCGCCAACCTCGACGATTGATATTGAAGAGAGATGTCCTACACCAAGCATAGCAACTGCTGAGTTAGCTATGGAGTTGCCTCCTACAAATGACGAGGAGGTCAAGGGCAATGGCGATCATGAAGAAGTTACATGTGACAGATCAGGAGTTCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGATTTACATCAGATGTCAGCCCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTGGACGCTTCAGCTGAGACACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCAGAAGCAAATACATGGAACCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCTAACGGACAAATTTTCTCCGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGTGTTACTTGCACCCAG TTTT  CAAACCCACAGGTGGTAGCCTCAGATCAGCAGCATCAACACCAAACTTCTGAAGCTGTAGATTACAAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCAAATACATCCTCAAGCAGTGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCATATAGAAACGGAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGATAGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGG CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAAAGAAAACAACGTTGGAA               ]
[+] EMBL CF314503             [ TTCCTGCCTTGCCTCCTCGTCTCCTTCTCTGCTGCTCTCCAAGCTCTTCCTGCTTCCATCAGGTTGTCTCGAGAAAGATTGGAGTTTTTGGTGGTTTGGGTTGTGCGGTTCTTGCTTTTGTTGGCGCAAGCGCATGGCTGGTTCTGGGACATAGTGAGCTGAGATAGAGTTCTTGTGTTCGGTGGAGTTTGGCTTTGGTGAATCTTCGATTCAAGTCTGGAGATGGCGCGTTTTCAGGAAACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTTGGGCACCAAAACCTCATGGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATGATGGACGAAGCGCGAATTCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAGAAATGGACCGANGACGAACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCCTGGCGACGCATCCAAGAGCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCACAGAAGTTCTTCTCCAAGGTCATCAAAGAATCATCTGGGGACAATTGC ACAGCTTGGGGTGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA753218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              gGCAACTGCTGAGTTAGCTATGGAGTTGCCTCCTACAAATGACGAGGATGTCAAGGGCAATGGCGATCATGAAGAAGTTACATGTGACAGATCAGGAGTTCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGATTTACATCAGATGTCAGCCCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTGGACGCTTCAGTTGAGACACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCAGAAGCAAATACATGGAACCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCTAACGGACAAATTTTCTCCGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGTGTTACTTGCACCCAGNTTTTNNCAAACCCCCAccaagg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA764355             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCAAATACATCCTCAAGCAGTGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCATATAGAAACGGAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGTTGATAGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACAGCGCTAGTACTCCACAAAACAGGGAGTGGCCCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGA                                                                                                                                               ]
[+] EMBL AU174527             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGATAGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGG CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCG                                                                                                                                                           ]
[+] EMBL AU174528             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGG CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAAAGAAAACAACGTTGGAAAGCTTTGTTCAAAAA]
[+] EMBL AF522022             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACAAAACAGGGAGTGG CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAAAGAAAACAACGTTGGAAA              ]


>consensus_9886#0 CTTCCTGCCTTGCCTCCTCGTCTCCTTCTCTGCTGCTCTCCAAGCTCTTCCTGCTTCCAT CAGGTTGTCTCGAGAAAGATTGGAGTTTTTGGTGGTTTGGGTTGTGCGGTTCTTGCTTTT GTTGGCGCAAGCGCATGGCTGGTTCTGGGACATAGTGAGCTGAGATAGAGTTCTTGTGTT CGGTGGAGTTTGGCTTTGGTGAATCTTCGATTCAAGTCTGGAGATGGCGCGTTTTCAGGA AACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTTGGGCACCGAAACCTCAT GGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATGATGGACGAAGCGCGAAT TCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAGAAATGGACCGAGGACGA ACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCCTGGCGACGCATCCAAGA GCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCACAGAAGTTCTTCTCCAA GGTCATCAAAGAATCATCTGGGGACAATTGCAACAGCTTGGGTGCTGCATCATCAATTCA GATTCCCCCGCCGCGGCCGAAGCGTAAGCCTGTTCATCCGTACCCACGCAATCTAGGGAG CACAGCCAGCAAGAACGTCCCTGCACTGAAACAGCTAGAGAAGCCTCAGCTGCAGGTGCA GTCTCTCTACGACCAGGACAATGGGTCGCCGACGTCAGTGTTAACAGTACCACAGATACG GGCTGATACACTGGGAAGTGAGAGTGGTGGGTCGCCAACCTCGACGATTGATATTGAAGA GAGATGTCCTACACCAAGCATAGCAACTGCTGAGTTAGCTATGGAGTTGCCTCCTACAAA TGACGAGGAGGTCAAGGGCAATGGCGATCATGAAGAAGTTACATGTGACAGATCAGGAGT TCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGATTTACATCAGATGTCAGC CCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTGGACGCTTCAGCTGAGAC ACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCAGAAGCAAATACATGGAA CCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCTAACGGACAAATTTTCTC CGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGTGTTACTTGCACCCAGTT TTCAAACCCACAGGTGGTAGCCTCAGATCAGCAGCATCAACACCAAACTTCTGAAGCTGT AGATTACAAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCAAATACATCCTCAAGCAG TGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCATATAGAAACGGAAACAG AAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAA CTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGATAGTGAGGCGCTGCTGAA GTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTT TGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATG AGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAAC CGCGTTAGTACTCCACAAAACAGGGAGTGGCCGTGGTTCTTGTCTGGCCATGTACAGTTC AAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGA GCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGG TTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAA AGAAAACAACGTTGGAAAGCTTTGTTCAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)