These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9886#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2012 fasta sequence [CTTCCTGCCTTGCCTCCTCGTCTCCTTCTCTGCTGCTCTCCAAGCTCTTCCTGCTTCCATCAGGTTGTCTCGAGAAAGATTGGAGTTTTTGGTGGTTTGGGTTGTGCGGTTCTTGCTTTTGTTGGCGCAAGCGCATGGCTGGTTCTGGGACATAGTGAGCTGAGATAGAGTTCTTGTGTTCGGTGGAGTTTGGCTTTGGTGAATCTTCGATTCAAGTCTGGAGATGGCGCGTTTTCAGGAAACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTTGGGCACCGAAACCTCATGGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATGATGGACGAAGCGCGAATTCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAGAAATGGACCGAGGACGAACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCCTGGCGACGCATCCAAGAGCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCACAGAAGTTCTTCTCCAAGGTCATCAAAGAATCATCTGGGGACAATTGCAACAGCTT-GGGTGCTGCATCATCAATTCAGATTCCCCCGCCGCGGCCGAAGCGTAAGCCTGTTCATCCGTACCCACGCAATCTAGGGAGCACAGCCAGCAAGAACGTCCCTGCACTGAAACAGCTAGAGAAGCCTCAGCTGCAGGTGCAGTCTCTCTACGACCAGGACAATGGGTCGCCGACGTCAGTGTTAACAGTACCACAGATACGGGCTGATACACTGGGAAGTGAGAGTGGTGGGTCGCCAACCTCGACGATTGATATTGAAGAGAGATGTCCTACACCAAGCATAGCAACTGCTGAGTTAGCTATGGAGTTGCCTCCTACAAATGACGAGGAGGTCAAGGGCAATGGCGATCATGAAGAAGTTACATGTGACAGATCAGGAGTTCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGATTTACATCAGATGTCAGCCCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTGGACGCTTCAGCTGAGACACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCAGAAGCAAATACATGGAACCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCTAACGGACAAATTTTCTCCGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGTGTTACTTGCACCCAG-TTTT--CAAACCCACAGGTGGTAGCCTCAGATCAGCAGCATCAACACCAAACTTCTGAAGCTGTAGATTACAAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCAAATACATCCTCAAGCAGTGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCATATAGAAACGGAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGATAGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGG-CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAAAGAAAACAACGTTGGAAAGCTTTGTTCAAAAA] [+] EMBL AK101209 [CTTCCTGCCTTGCCTCCTCGTCTCCTTCTCTGCTGCTCTCCAAGCTCTTCCTGCTTCCATCAGGTTGTCTCGAGAAAGATTGGAGTTTTTGGTGGTTTGGGTTGTGCGGTTCTTGCTTTTGTTGGCGCAAGCGCATGGCTGGTTCTGGGACATAGTGAGCTGAGATAGAGTTCTTGTGTTCGGTGGAGTTTGGCTTTGGTGAATCTTCGATTCAAGTCTGGAGATGGCGCGTTTTCAGGAAACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTTGGGCACCGAAACCTCATGGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATGATGGACGAAGCGCGAATTCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAGAAATGGACCGAGGACGAACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCCTGGCGACGCATCCAAGAGCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCACAGAAGTTCTTCTCCAAGGTCATCAAAGAATCATCTGGGGACAATTGCAACAGCTT GGGTGCTGCATCATCAATTCAGATTCCCCCGCCGCGGCCGAAGCGTAAGCCTGTTCATCCGTACCCACGCAATCTAGGGAGCACAGCCAGCAAGAACGTCCCTGCACTGAAACAGCTAGAGAAGCCTCAGCTGCAGGTGCAGTCTCTCTACGACCAGGACAATGGGTCGCCGACGTCAGTGTTAACAGTACCACAGATACGGGCTGATACACTGGGAAGTGAGAGTGGTGGGTCGCCAACCTCGACGATTGATATTGAAGAGAGATGTCCTACACCAAGCATAGCAACTGCTGAGTTAGCTATGGAGTTGCCTCCTACAAATGACGAGGAGGTCAAGGGCAATGGCGATCATGAAGAAGTTACATGTGACAGATCAGGAGTTCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGATTTACATCAGATGTCAGCCCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTGGACGCTTCAGCTGAGACACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCAGAAGCAAATACATGGAACCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCTAACGGACAAATTTTCTCCGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGTGTTACTTGCACCCAG TTTT CAAACCCACAGGTGGTAGCCTCAGATCAGCAGCATCAACACCAAACTTCTGAAGCTGTAGATTACAAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCAAATACATCCTCAAGCAGTGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCATATAGAAACGGAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGATAGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGG CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAAAGAAAACAACGTTGGAA ] [+] EMBL CF314503 [ TTCCTGCCTTGCCTCCTCGTCTCCTTCTCTGCTGCTCTCCAAGCTCTTCCTGCTTCCATCAGGTTGTCTCGAGAAAGATTGGAGTTTTTGGTGGTTTGGGTTGTGCGGTTCTTGCTTTTGTTGGCGCAAGCGCATGGCTGGTTCTGGGACATAGTGAGCTGAGATAGAGTTCTTGTGTTCGGTGGAGTTTGGCTTTGGTGAATCTTCGATTCAAGTCTGGAGATGGCGCGTTTTCAGGAAACCAAGGCGAGGAATGATCAAGGACCTGTTGCTGATCATGTTGGGCACCAAAACCTCATGGAAAACCTCACAGATCCTCTGGATTCCAGTGGCATGGACATGATGGACGAAGCGCGAATTCCTAAGGCGCGGAAGCCATACACGATAACGAAGCAAAGGGAGAAATGGACCGANGACGAACATAAGCTGTTCTTGGAAGCCCTGCAGCTCCATGGCCGAGCCTGGCGACGCATCCAAGAGCACATAGGCACCAAGACTGCCGTGCAGATCAGGAGCCACGCACAGAAGTTCTTCTCCAAGGTCATCAAAGAATCATCTGGGGACAATTGC ACAGCTTGGGGTGCTG ] [+] EMBL CA753218 [ gGCAACTGCTGAGTTAGCTATGGAGTTGCCTCCTACAAATGACGAGGATGTCAAGGGCAATGGCGATCATGAAGAAGTTACATGTGACAGATCAGGAGTTCCAGTCCTTAGGCTATTTGGCAAGAGGGTTATGGTGAATGATTTACATCAGATGTCAGCCCCTGATGCCGGGAACCTGCAAACTGTGGCAGACATGGAAGTGGACGCTTCAGTTGAGACACCAACTAGTGGAACTGGGAAATTCTCTTCCCATGGTGCAGCAGAAGCAAATACATGGAACCCATGGCTGACTAACACACAGCAGTTTCTGTATTATCTTCCTAACGGACAAATTTTCTCCGTGCATTCTGCTCTCCCATGCTTCACCTACCATAATGAGGGTGTTACTTGCACCCAGNTTTTNNCAAACCCCCAccaagg ] [+] EMBL CA764355 [ AAGGGTATACAGAGGGAAGGATCTTGGACGGAGTCAAATACATCCTCAAGCAGTGTGCCTGAAACAGCAACTCATAATTCAGAGACTACAGAATCATATAGAAACGGAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGTTGATAGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACAGCGCTAGTACTCCACAAAACAGGGAGTGGCCCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGA ] [+] EMBL AU174527 [ GAAACAGAAACGAAGATGAAATGGTACCTTCTCCAGATTCAAGAAAATGTGTGAGCCCAGGTTCCAACTGCAGGCGAGGCTTTGTGCCGTACAAGAGATGTGTTGCTGATAGTGAGGCGCTGCTGAAGTCACAGGCGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGG CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCG ] [+] EMBL AU174528 [ CGCCTCAGGAGGAGGCAGACGGAGAGATGACGAGGCTGTGCTTATAAATTTTTGGAGCCTCGTAGATCACTGCAACTATAGATGCTTGCTACTAATATTTTGTTCACAGATGAGTAGGAACTGATGTACTGCAGGAGGGGCTGCTTTCCTGTTACAAGAGGCAGATTGAAACCGCGTTAGTACTCCACAAAACAGGGAGTGG CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAAAGAAAACAACGTTGGAAAGCTTTGTTCAAAAA] [+] EMBL AF522022 [ ACAAAACAGGGAGTGG CCGTGGTTCTTGTCTGGCCATGTACAGTTCAAATATTCTATGTTTCCATTTTCCTCGTCGTGTGTTTGTAATTTCGCTCCCATTGCGGGAGCGTTCAGAGGTCAATGGCTGTCATGCAATGACAAGTATTTTGATAGAGTTGTAGAAGGGTTGTACTGATGTAAATTATACAGTAACTTATTATCTGTAAGACAATAACAGGCGAGCTAAAGAAAACAACGTTGGAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||