cluster # 9892

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Oryza sativa
cluster # 9892 cluster # 9892 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9892#0 length = 1216 sequences # 7
consensusID : consensus_9892#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1216
fasta sequence
                              [CCCGTTTTGCTCCGCTTCCTCCTCTGCTCCAGGAATAATATTTTGCTGGAGAATAGTCGGATGCAGGAGGCGAAAAAAGATTCGATCTTTGGAGGCCTTGCCTCTGGGGCGCCCGTCGGAGCGGATCGCTTCCCGTTTGATCCTCGGGAGTATTCGCCGGCGATGAGCTCCGACTCCAGGGAGCTGCTCGGGATCGATCCCCCGGAGCTCATCTTCCCCTTCGAATTAAAGAAGCAAATCTCGTGTTCTCTGCACCTAACAAACAAGACAGATGAATATGTCACGTTTAAGGTTAAGACAACTAGTCCAAAGAAGTACTGCGTCCGTCCAAATAACGGCATTGTGGCTCCCCAGTCCACATCCAATGTTCTTGTAACAATGCAAGCTCAGCGGGAGGCGCCACCGGACATGCAATGCAAGGACAAATTCCTTGTGCAGAGTGCCATAGTGACACAAGAGCTCACACCGAAGGATATCACCGGAGACATGTTTACGAAAGAATCAGGTAATGTGGTGGATGAGGTGAAGTTAAAGGTTGTTTATACTCAACCTCACCCGACATCTCTCAATGGCGGGTCTGAGGAAGGTCTAGGAAGCTTGAGTTATCAAGAAGCAACAAAAGGATCTAGAGAATCAGAAACAGTAACCTCTGAGCCATTGGCCTTGATTTCAAAGTTGAAGGAGGAGAAGAGTTCTGCCATTCAACAGAACATGAAGCTTCGAGAAGAACTGGATCTTCTAAGGAGGCAAATGGGGAGTCAGCA-CGGTGGTTTCTCACTAGTTT-TTGTGCT-GGTTATTGCTATTCTGGGAATCCTGCTT-GGTTTTCTCA-TTAAGAGATGAGCGTCT-GTGATCATATAT-CTTGTTCCACTTTTCTGTGAAAGAGTTGATAGTCGTGGG-CCTTGTCTGTTGTGTTAGCCA-T-TTGTACCAAC-TCATGATCGTCTTATCTTAGGACCTGA-TTCCT-CT-TGTAATTTCTGACTATCAAATT-CCAATCAGTAGCTACTGCATCCAGTCAATAAGTCGTCT-GT-CCATTT-AGCAT-GT-TTGAGT-ATA-AGTTTTTTTTGGT-CAATT-GT-ATTCAT-CT-TTTGACACCTGTAAATATGACA-CTT-CCCTT-A-ACATTATGGCTTGCGATATGTATATGCTGGATCCTTGTGAATCTTATGGAGCAGGATTTTCGTTAAAAAAAGTTTTCAATATATATGAACAGTGTTGCTTCAAAAAAAAA]

[+] EMBL AU174785             [CCCGTTTTGCTCCGCTTCCTCCTCTGCTCCAGGAATAATATTTTGCTGGAGAATAGTCGGATGCAGGAGGCGAAAAAAGATTCGATCTTTGGAGGCCTTGCCTCTGGGGCGCCCGTCGGAGCGGATCGCTTCCCGTTTGATCCTCGGGAGTATTCGCCGGCGATGAGCTCCGACTCCAGGGAGCTGCTCGGGATCGATCCCCCGGAGCTCATCTTCCCCTTCGAATTAAAGAAGCAAATCTCGTGTTCTCTGCACCTAACAAACAAGACAGATGAATATGTCACGTTTAAGGTTAAGACAACTAGTCCAAAGAAGTACTGCGTCCGTCCAAATAACGGCATTGTGGCTCCCCAGTCCACATCCAATGTTCTTGTAACAATGCAAGCTCAGCGGGAGGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK073818             [                                          TTGCTGGAGAATAGTCGGATGCAGGAGGCGAAAAAAGATTCGATCTTTGGAGGCCTTGCCTCTGGGGCGCCCGTCGGAGCGGATCGCTTCCCGTTTGATCCTCGGGAGTATTCGCCGGCGATGAGCTCCGACTCCAGGGAGCTGCTCGGGATCGATCCCCCGGAGCTCATCTTCCCCTTCGAATTAAAGAAGCAAATCTCGTGTTCTCTGCACCTAACAAACAAGACAGATGAATATGTCACGTTTAAGGTTAAGACGACTAGTCCAAAGAAGTACTGCGTCCGTCCAAATAACGGCATTGTGGCTCCCCAGTCCACATCCAATGTTCTTGTAACAATGCAAGCTCAGCGGGAGGCGCCACCGGACATGCAATGCAAGGACAAATTCCTTGTGCAGAGTGCCATAGTGACACAAGAGCTCACACCGAAGGATATCACCGGAGACATGTTTACGAAAGAATCAGGTAATGTGGTGGATGAGGTGAAGTTAAAGGTTGTTTATACTCAACCTCACCCGACATCTCTCAATGGCGGGTCTGAGGAAGGTCTAGGAAGCTTGAGTTATCAAGAAGCAACAAAAGGATCTAGAGAATCAGAAACAGTAACCTCTGAGCCATTGGCCTTGATTTCAAAGTTGAAGGAGGAGAAGAGTTCTGCCATTCAACAGAACATGAAGCTTCGAGAAGAACTGGATCTTCTAAGGAGGCAAATGGGGAGTCAGCA CGGTGGTTTCTCACTAGTTT TTGTGCT GGTTATTGCTATTCTGGGAATCCTGCTT GGTTTTCTCA TTAAGAGATGAGCGTCT GTGATCATATAT CTTGTTCCACTTTTCTGTGAAAGAGTTGATAGTCGTGGG CCTTGTCTGTTGTGTTAGCCA T TTGTACCAAC TCATGATCGTCTTATCTTAGGACCTGA TTCCT CT TGTAATTTCTGACTATCAAATT CCAATCAGTAGCTACTGCATCCAGTCAATAAGTCGTCT GT CCATTT AGCAT GT TTGAGT ATA AGTTTTTTTTGGT CAATT GT ATTCAT CT TTTGACACCTGTAAATATGACA CTT CCCTT A ACATTATGGCTTGCGATATGTATATGCTG                                                                                 ]
[+] EMBL CB653652             [                                                     TAGTCGGATGCAGGAGGCGAAAAAAGATTCGATCTTTGGAGGCCTTGCCTCTGGGGCGCCCGTCGGAGCGGATCGCTTCCCGTTTGATCCTCGGGAGTATTCGCCGGCGATGAGCTCCGACTCCAGGGAGCTGCTCGGGATCGATCCCCCGGAGCTCATCTTCCCCTTCGAATTAAAGAAGCAAATCTCGTGTTCTCTGCACCTAACAAACAAGACAGATGAATATGTCACGTTTAAGGTTAAGACAACTAGTCCAAAGAAGTACTGCGTCCGTCCAAATAACGGCATTGTGGCTCCCCAGTCCACATCCAATGTTCTTGTAACAATGCAAGCTCAGCGGGAGGCGCCACCGGACATGCAATGCAAGGACAAATTCCTTGTGCAGAGTGCCATAGTGACACAAGAGCTCACACCGAAGGATATCACCGGAGACATGTTTACGAAAGAATCAGGTAATGTGGTGGATGAGGTGAAGTTAAAGGTTGTTTATACTCAACCTCACCCGACATCTCTCAATGGCGGGTCTGAGGAAGGTCTAGGAAGCTTGAGTTATCAAGAAGCAACAAAAGGATCTAGAGAATCAGAAACAGTAACCTCTGAGCCATTGGCCTTGATTTCAAAGTTGAAGGAGGAGAAGAGTTCTGCCATTCAACAGAACATGAAGCTTCGAGAAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB653653             [                                                                                                                                                                                                                                                                                                                                                                                               AGCTCAGCGGGAGGCGCCACCGGACATGCAATGCAAGGACAAATTCCTTGTGCAGAGTGCCATAGTGACACAAGAGCTCACACCGAAGGATATCACCGGAGACATGTTTACGAAAGAATCAGGTAATGTGGTGGATGAGGTGAAGTTAAAGGTTGTTTATACTCAACCTCACCCGACATCTCTCAATGGCGGGTCTGAGGAAGGTCTAGGAAGCTTGAGTTATCAAGAAGCAACAAAAGGATCTAGAGAATCAGAAACAGTAACCTCTGAGCCATTGGCCTTGATTTCAAAGTTGAAGGAGGAGAAGAGTTCTGCCATTCAACAGAACATGAAGCTTCGAGAAGAACTGGATCTTCTAAGGAGGCAAATGGGGAGTCAGCA CGGTGGTTTCTCACTAGTTT TTGTGCT GGTTATTGCTATTCTGGGAATCCTGCTT GGTTTTCTCA TTAAGAGATGAGCGTCT GTGATCATATAT CTTGTTCCACTTTTCTGTGAAAGAGTTGATAGTCGTGGG CCTTGTCTGTTGTGTTAGCCA T TTGTACCAAC TCATGATCGTCTTATCTTAGGACCTGA TTCCT CT TGTAATTTCTGACTATCAAATT CCAATCAGTAGCTACTGCATCCAGTCAATAAGTCGTCT GT CCATTT AGCAT GT TTGAGT ATA AGTTTTTTTTGGT CAATT GT ATTCAT CT TTTGACACCTGTAAATATGACA CTT CCCTT A ACATTATGGCTTGCGATATGTATATGCTGGATCCTTGTGAATCTTATGGAGCAGG                                                       ]
[+] EMBL BI803022             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAAAGTTGAAGGAGGAGAAGAGTTCTGCCATTCAACAGAACATGAAGCTTCGAGAAGAACTGGATCTTCTAAGGAGCCAAATGGGGAGTCAGCACCGGTGGTTTCTCACTAGTTT TTGTGCT GGTTATTGCTATTCTGGGAATCCTGCTT GGTTTTCTCA TTAAGAGATGAGCGTCT GTGATCATATAT CTTGTTCCACTTTTCTGTGAAAGAGTTGATAGTCGTGGG CCTTGTCTGTTGTGTTAGCCA T TTGTACCAAC TCATGATCGTCTTATCTTAGGACCTGA TTCCT CTCTGTAATTTCTGACTATCAAATT CCAATCAGTAGCTACTGCATCCAGTCAATAAGTCGTCT GT CCATTT AGCAT GT TTGAGT ATA AGTTTTTTTTGGT CAATT GT ATTCAT CT TTTGACACCTGTAAATATGACA CTTCCCCTC ACACATTATGGCTTGCGATATGTAaaaaa                                                                                   ]
[+] EMBL BQ908294             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGAGAAGAACTGGATCTTCTAAGGAGGCAAATGGGGAGTCAGCC CGGTGGTTTCTCACTAGTTTCTTGTGCTCGGTTATTGCTATTCTGGGAATCCTGCTTCGGTTTTCTCANTTAAGAGATGAGCGTCTCGTGATCATATATCCTTGTTCCNCTTTTCTGTGAAAGAGTTGATAGTCGTGGGCCCTTGTCTGTTGTGTTAGCCACTCTTGTACCAACGTCATGATCGTCTTATCTTAGGACCTGACTTCCTCCT TGTAATTTCTGACTATCAAATTGCCAATCAGTAGCTACTGCATCCAGTCAATAAGTCGTCTGGTGCCATTTGAGCATGGTGTTGAGTNATATGGTTTTTTTTGGTGCAATTGGTGATTCATCCTGTTTGACACCTGTAAATATGACAGCTT CCCTTGA ACNTTATGGCTTGCGATATGTATATGCTGGATCCTTGTGAATCTTATGGAGCAGGATTTTCGTTAAAAAAA                                       ]
[+] EMBL AU174784             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGGGAGTCAGCA CGGTGGTTTCTCNCTAGTTT TTGTGCT GGTTATTGCTATTCTGGGAATCCTGCTT GGTTTTCTCA TTAAGAGATGAGCGTCT GTGATCATATAT CTTGTTCCACTTTTCTGTGAAAGAGTTGATAGTCGTGGG CCTTGTCTGTTGTGTTAGCCN T TTGTACCAAC TCATGATCGTCTTATCTTAGGACCTGA TTCCT CT TGTAATTTCTGACTATCAAATT CCAATCAGTAGCTACTGCATCCAGTCAATAAGTCGTCT GT CCATTT AGCAT GT TTGAGT ATA AGTTTTTTTTGGT CAATT GT ATTCAT CT TTTGACACCTGTAAATATGACA CTT CCCTT A ACATTATGGCTTGCGATATGTATATGCTGGATCCTTGTGAATCTTATGGAGCAGGATTTTCGTTACTGTTGGTTTTCAATATATATGAACAGTGTTGCTTCAAAAAAAAA]




>consensus_9892#0
CCCGTTTTGCTCCGCTTCCTCCTCTGCTCCAGGAATAATATTTTGCTGGAGAATAGTCGG
ATGCAGGAGGCGAAAAAAGATTCGATCTTTGGAGGCCTTGCCTCTGGGGCGCCCGTCGGA
GCGGATCGCTTCCCGTTTGATCCTCGGGAGTATTCGCCGGCGATGAGCTCCGACTCCAGG
GAGCTGCTCGGGATCGATCCCCCGGAGCTCATCTTCCCCTTCGAATTAAAGAAGCAAATC
TCGTGTTCTCTGCACCTAACAAACAAGACAGATGAATATGTCACGTTTAAGGTTAAGACA
ACTAGTCCAAAGAAGTACTGCGTCCGTCCAAATAACGGCATTGTGGCTCCCCAGTCCACA
TCCAATGTTCTTGTAACAATGCAAGCTCAGCGGGAGGCGCCACCGGACATGCAATGCAAG
GACAAATTCCTTGTGCAGAGTGCCATAGTGACACAAGAGCTCACACCGAAGGATATCACC
GGAGACATGTTTACGAAAGAATCAGGTAATGTGGTGGATGAGGTGAAGTTAAAGGTTGTT
TATACTCAACCTCACCCGACATCTCTCAATGGCGGGTCTGAGGAAGGTCTAGGAAGCTTG
AGTTATCAAGAAGCAACAAAAGGATCTAGAGAATCAGAAACAGTAACCTCTGAGCCATTG
GCCTTGATTTCAAAGTTGAAGGAGGAGAAGAGTTCTGCCATTCAACAGAACATGAAGCTT
CGAGAAGAACTGGATCTTCTAAGGAGGCAAATGGGGAGTCAGCACGGTGGTTTCTCACTA
GTTTTTGTGCTGGTTATTGCTATTCTGGGAATCCTGCTTGGTTTTCTCATTAAGAGATGA
GCGTCTGTGATCATATATCTTGTTCCACTTTTCTGTGAAAGAGTTGATAGTCGTGGGCCT
TGTCTGTTGTGTTAGCCATTTGTACCAACTCATGATCGTCTTATCTTAGGACCTGATTCC
TCTTGTAATTTCTGACTATCAAATTCCAATCAGTAGCTACTGCATCCAGTCAATAAGTCG
TCTGTCCATTTAGCATGTTTGAGTATAAGTTTTTTTTGGTCAATTGTATTCATCTTTTGA
CACCTGTAAATATGACACTTCCCTTAACATTATGGCTTGCGATATGTATATGCTGGATCC
TTGTGAATCTTATGGAGCAGGATTTTCGTTAAAAAAAGTTTTCAATATATATGAACAGTG
TTGCTTCAAAAAAAAA
clustalw multiple alignements is not computed in this case