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Oryza sativa
cluster # 9899 cluster # 9899       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9899#0 length = 877 sequences # 1  
consensus_9899#1 length = 718 sequences # 2  
consensus_9899#2 length = 672 sequences # 3  
consensus_9899#3 length = 609 sequences # 1  

consensusID : consensus_9899#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 877
fasta sequence
                              [TTTTTAATCCTCTTCTTCCCCGGCCCATGCATATTCTCTCTGCTTTAATGGTGTGAAATTTCAGAACAAGAATCTAGTTTCCGCATACAGAGTTCCAGAAATTTCCGACTGTTCATCTCATCGATCATCCGCGATTCTTTTTTTAGTTTTTGATGGTGATCAGCCACACCGCTAGCTAGTTGACACATGTATGCAGTAGCAATATTTGTTAGCTGAAAAGGAAGCAAGGAGGAAAGCAGCAAATCAGCTTTGTTGCCAAGCTGCTTGGCAGAGAGACAAAGTAATTGACCATGGCAAAAGATCCTCATGTCTCCATCTCTCTCACCGGCCTCGCCATGGTCGTCCTCCTCATCTTCAGCTCCTCCTTCCTCCAGGCCGCCCAAGGATCAGACAAGAAGATGGCAATGAAGTACGACGTGCCGGTGAAGAGGCTGGTGTACCGGCCGTCGGCGATGCAGGCGGCGGTGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGCTGCCGGTGCTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACGAGATGCTGCTACGCCATCGACTGCAACATCCCCGGCAAGCCCTTCGGCGTCTGCGCCTTCTCTCCCCACACCTGCGACTGTGGTGCCACCAACTGCACCAGCCAACAGCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATCTCTTCCATGATCAATATACTTATGCGCCTGAATCATTCAACTGTTTTCTGATGCGATTGCAAACGTATTAAGTTTTTTCAGAGATTCTTGGGACTTAGATATCCTGACATGAGCATGTTGATCTGAAAGTTTAACTGCATATAGAATCTTCAGAAAGGGATTAA]

[+] EMBL AK068049             [TTTTTAATCCTCTTCTTCCCCGGCCCATGCATATTCTCTCTGCTTTAATGGTGTGAAATTTCAGAACAAGAATCTAGTTTCCGCATACAGAGTTCCAGAAATTTCCGACTGTTCATCTCATCGATCATCCGCGATTCTTTTTTTAGTTTTTGATGGTGATCAGCCACACCGCTAGCTAGTTGACACATGTATGCAGTAGCAATATTTGTTAGCTGAAAAGGAAGCAAGGAGGAAAGCAGCAAATCAGCTTTGTTGCCAAGCTGCTTGGCAGAGAGACAAAGTAATTGACCATGGCAAAAGATCCTCATGTCTCCATCTCTCTCACCGGCCTCGCCATGGTCGTCCTCCTCATCTTCAGCTCCTCCTTCCTCCAGGCCGCCCAAGGATCAGACAAGAAGATGGCAATGAAGTACGACGTGCCGGTGAAGAGGCTGGTGTACCGGCCGTCGGCGATGCAGGCGGCGGTGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGCTGCCGGTGCTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACGAGATGCTGCTACGCCATCGACTGCAACATCCCCGGCAAGCCCTTCGGCGTCTGCGCCTTCTCTCCCCACACCTGCGACTGTGGTGCCACCAACTGCACCAGCCAACAGCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATCTCTTCCATGATCAATATACTTATGCGCCTGAATCATTCAACTGTTTTCTGATGCGATTGCAAACGTATTAAGTTTTTTCAGAGATTCTTGGGACTTAGATATCCTGACATGAGCATGTTGATCTGAAAGTTTAACTGCATATAGAATCTTCAGAAAGGGATTAA]


>consensus_9899#0 TTTTTAATCCTCTTCTTCCCCGGCCCATGCATATTCTCTCTGCTTTAATGGTGTGAAATT TCAGAACAAGAATCTAGTTTCCGCATACAGAGTTCCAGAAATTTCCGACTGTTCATCTCA TCGATCATCCGCGATTCTTTTTTTAGTTTTTGATGGTGATCAGCCACACCGCTAGCTAGT TGACACATGTATGCAGTAGCAATATTTGTTAGCTGAAAAGGAAGCAAGGAGGAAAGCAGC AAATCAGCTTTGTTGCCAAGCTGCTTGGCAGAGAGACAAAGTAATTGACCATGGCAAAAG ATCCTCATGTCTCCATCTCTCTCACCGGCCTCGCCATGGTCGTCCTCCTCATCTTCAGCT CCTCCTTCCTCCAGGCCGCCCAAGGATCAGACAAGAAGATGGCAATGAAGTACGACGTGC CGGTGAAGAGGCTGGTGTACCGGCCGTCGGCGATGCAGGCGGCGGTGATCGGCACGGAGG CGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGCTGCCGGTGCTGCGCGTCGTCGAACG CGAGCAGCTGCGTGGACACGAGATGCTGCTACGCCATCGACTGCAACATCCCCGGCAAGC CCTTCGGCGTCTGCGCCTTCTCTCCCCACACCTGCGACTGTGGTGCCACCAACTGCACCA GCCAACAGCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATCTCTTCCA TGATCAATATACTTATGCGCCTGAATCATTCAACTGTTTTCTGATGCGATTGCAAACGTA TTAAGTTTTTTCAGAGATTCTTGGGACTTAGATATCCTGACATGAGCATGTTGATCTGAA AGTTTAACTGCATATAGAATCTTCAGAAAGGGATTAA



consensusID : consensus_9899#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 718
fasta sequence
                              [NGCAAAAGATCCTCATGTCTCCATCTCTCTCACCGGCCTCGCCATGGTCGTCTTCCTCATCTTCAGCTCCTCCTTCCTCCAGGCCGCCCAAGGTACGTACACACCTTCATCTTCACCTGCTTCATCATGCATCTTGGTGATCCTTCCAAAAGTCGATCGGATTCCATTAATTGATTTTCATGCATGCAGGACCAGACAAGAAGATGGTGATGAAGTACGACGTGCCGGTGAAGAGGTTGATGTACCGGCCGGCGGCGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGCTGCCGGTGCTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACCCGGTGCTGCTACGCCATCGACTGCAACATCCCCGGCAAGCCCTTTCGG-GTCTGCGACTTCTCCCANAACACCTGCGACTGTGGCGCCACCAATTGNACCAGCCAGCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATCTCTTCCATGATCAATATGCATATGCGCCTGAATTATTCAACGGTTTTCTGATGCGATTGCAAACGTATTAAGTTTTTTTTTTCAGAGATTCTTGGGACTAGATATGCTTAAGGATGTCATTGTACCTGANACGGGCATGTTGATATCTGAATGTTTAACTGCATATAGAATCTTCAGAAAGGGATTAANTCTTGATCTACCAGTTCCACAAACAAAAA]

[+] EMBL C72936               [NGCAAAAGATCCTCATGTCTCCATCTCTCTCACCGGCCTCGCCATGGTCGTCTTCCTCATCTTCAGCTCCTCCTTCCTCCAGGCCGCCCAAGGTACGTACACACCTTCATCTTCACCTGCTTCATCATGCATCTTGGTGATCCTTCCAAAAGTCGATCGGATTCCATTAATTGATTTTCATGCATGCAGGACCAGACAAGAAGATGGTGATGAAGTACGACGTGCCGGTGAAGAGGTTGATGTACCGGCCGGCGGCGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGCTGCCGGTGCTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACCCGGTGCTGCTACGCCATCGACTGCAACATCCCCGGCAAGCCCTTTCGG GTCTGCGA                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU101198             [                                                                                            GTACGTACACACCTTCATCTTNACCTGCTTCATNATGCATCTTGGTNATCCTTCCAAAAGTCGATCGGATTCCATTAATTGATTTTCATGCATGCAGGACCAGACAAGAAGATGGTGATGAAGTACGACGTGCCGGTGAAGAGGTTGATGTACCGGCCGGCGGCGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGCTGCCGGT NTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACCCGGTGCTG TACGCCATCGACTGCAACATCCCCGGCAAGCC  TTCGGCGTCTGCGCCTTCTCCCANAACACCTGCGACTGTGGCGCCACCAATTGNACCAGCCAGCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATCTCTTCCATGATCAATATGCATATGCGCCTGAATTATTCAACGGTTTTCTGATGCGATTGCAAACGTATTAAGTTTTTTTTTTCAGAGATTCTTGGGACTAGATATGCTTAAGGATGTCATTGTACCTGANACGGGCATGTTGATATCTGAATGTTTAACTGCATATAGAATCTTCAGAAAGGGATTAANTCTTGATCTACCAGTTCCACAAACAAAAA]


>consensus_9899#1 NGCAAAAGATCCTCATGTCTCCATCTCTCTCACCGGCCTCGCCATGGTCGTCTTCCTCAT CTTCAGCTCCTCCTTCCTCCAGGCCGCCCAAGGTACGTACACACCTTCATCTTCACCTGC TTCATCATGCATCTTGGTGATCCTTCCAAAAGTCGATCGGATTCCATTAATTGATTTTCA TGCATGCAGGACCAGACAAGAAGATGGTGATGAAGTACGACGTGCCGGTGAAGAGGTTGA TGTACCGGCCGGCGGCGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCA TGGGCTGCCGGTGCTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACCCGGTGCTGCT ACGCCATCGACTGCAACATCCCCGGCAAGCCCTTTCGGGTCTGCGACTTCTCCCANAACA CCTGCGACTGTGGCGCCACCAATTGNACCAGCCAGCAGCCATGACCACACACCTCTTGCT GCTGCTAATTCAATTCGATCTCTTCCATGATCAATATGCATATGCGCCTGAATTATTCAA CGGTTTTCTGATGCGATTGCAAACGTATTAAGTTTTTTTTTTCAGAGATTCTTGGGACTA GATATGCTTAAGGATGTCATTGTACCTGANACGGGCATGTTGATATCTGAATGTTTAACT GCATATAGAATCTTCAGAAAGGGATTAANTCTTGATCTACCAGTTCCACAAACAAAAA



consensusID : consensus_9899#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 672
fasta sequence
                              [TCAGTGTTCTTCCATTCTTTCCAGAGAGACAAAGTAATTGACCATGGCAAAAGATCCTCATGTCTCCATCTCTCTCACCGGCCTCGCCATGGTCGTCTTCCTCATCTTCAGCTCCTCCTTCCTCCAGGCCGCCCAAGGACCAGACAAGAAGATGGTGATGAAGTACGACGTGCCGGTGAAGAGGTTGATGTACCGGCCGGCGGCGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGNCTGCCGGTGCTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACCCGGTGCTGCTACGCCATCGACTGCAACATCCCCGGCAAGCCCTTCGGCGTCTGCGCCTTCTCC-CCCCACACCTGCGACTGTGGCGCCACCAATTGCACCAGCCAGCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATCTCTTCCATGATCAATATGCATATGCGCCTGAATTATTCAACGGTTTTCTGATGCGATTGCAAACGTATTAAGTTTTTTTTTTCAGAGATTCTTGGGACTAGATATGCTTAAGGATGTCATTGTTCCTGACACGGGCATGTTGATATCTGAATGTTTAACTGCATATAGAATCTTCAGAAAGGGATTAATTCTTGATCTACCAGTTCCCCAAAAAAAAAAAAAA]

[+] EMBL CF338725             [TCAGTGTTCTTCCATTCTTTCCAGAGAGACAAAGTAATTGACCATGGCAAAAGATCCTCATGTCTCCATCTCTCTCACCGGCCTCGCCATGGTCGTCTTCCTCATCTTCAGCTCCTCCTTCCTCCAGGCCGCCCAAGGACCAGACAAGAAGATGGTGATGAAGTACGACGTGCCGGTGAAGAGGTTGATGTACCGGCCGGCGGCGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGNCTGCCGGTGCTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACCCGGTGCTGCTACGCCATCGACTGCAACATCCCCGGCAAGCCCTTCGGCGTCTGCGCCTTCTCC CCCCACACCTGCGACTGTGGCGCCACCAATTGCACCAGCCAGCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATCTCTTCCATGATCAATATGCATATGCGCCTGAATTATTCAACGGTTTTCTGATGCGATTGCAAACGTATTAAGTTTTTTTTTTCAGAGATTCTTGGGACTAGATATGCTTAAGGATGTCATTGTTCCTGACACGGGCATGTTGATATCTGAATGTTTAACTGCA                                                            ]
[+] EMBL CF338867             [TCAGTGTTCTTCCATTCTTTCCAGAGAGACAAAGTAATTGACCATGGCAAAAGATCCTCATGTCTCCATCTCTCTCACCGGCCTCGCCATGGTCGTCTTCCTCATCTTCAGCTCCTCCTTCCTCCAGGCCGCCCAAGGACCAGACAAGAAGATGGTGATGAAGTACGACGTGCCGGTGAAGAGGTTGATGTACCGGCCGGCGGCGATCGGCACGGAGGCGGCGGCGTACGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CA760130             [                                                                                                                                        GGACGAGACAAGGGGATGGTGATGAAGTACGACGTGCCGGTGAAGAGGTTGATGTACCGGCCGGCGGCGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGG CTGCCGGTGCTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACCCGGTGCTGNTACGCCATCGACTGCAACATCCCCGGCAAGCCCTTCGGGGTNTGCGCCTTCTCCNCCCCACACCTGCGACTGTGGCGCCACCAATTGCACCAGCCAGCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATCTCTTCCATGATCAATATGCATATGCGCCTGAATTATTCAACGGTTTTTTGATGCGATTGCAAACGTATTAAGTTTTTTTTTTCAGAGATTCTTGGGACTAGATATGCTTAAGGATGTCATTGTTCCTGACACGGGCATGTTGATATCTGAATGTTTAACTGCATATAGAATCTTCAGAAAGGGATTAATTCTTGATCTACCAGTTCCCCAAAAAAAAAAAAAA]


>consensus_9899#2 TCAGTGTTCTTCCATTCTTTCCAGAGAGACAAAGTAATTGACCATGGCAAAAGATCCTCA TGTCTCCATCTCTCTCACCGGCCTCGCCATGGTCGTCTTCCTCATCTTCAGCTCCTCCTT CCTCCAGGCCGCCCAAGGACCAGACAAGAAGATGGTGATGAAGTACGACGTGCCGGTGAA GAGGTTGATGTACCGGCCGGCGGCGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGA GCTGTGCATGGGNCTGCCGGTGCTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACCC GGTGCTGCTACGCCATCGACTGCAACATCCCCGGCAAGCCCTTCGGCGTCTGCGCCTTCT CCCCCCACACCTGCGACTGTGGCGCCACCAATTGCACCAGCCAGCAGCCATGACCACACA CCTCTTGCTGCTGCTAATTCAATTCGATCTCTTCCATGATCAATATGCATATGCGCCTGA ATTATTCAACGGTTTTCTGATGCGATTGCAAACGTATTAAGTTTTTTTTTTCAGAGATTC TTGGGACTAGATATGCTTAAGGATGTCATTGTTCCTGACACGGGCATGTTGATATCTGAA TGTTTAACTGCATATAGAATCTTCAGAAAGGGATTAATTCTTGATCTACCAGTTCCCCAA AAAAAAAAAAAA



consensusID : consensus_9899#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 609
fasta sequence
                              [CATCTTGGTGATCCTTCAAGTCGGTTCTGACTTCTCAATTGATATTCATGCATGCAGGATCAGACAAGAAGATGGCAATGAAGTACGACGTGCCGGTGAAGAGGCTGGTGTACCGGCCGTCGGCGATGCAGGCGGCGGTGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGCTGCCGGTGCTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACGAGATGCTGCTACGCCATCGACTGCAACATCCCCGGCAAGCCCTTCGGCGTCTGCGCCTTCTCTCCCCACACCTGCGACTGTGGTGCCACCAACTGCACCAGCCAACAGCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATCTCTTCCATGATCAATATACTTATGCGCCTGAATCATTCAACTGTTTTCTGATGCGATTGCAAACGTATTAAGTTTTTTCAGAGATTCTTGGGACTTAGATATCCTGACATGAGCATGTTGATCTGAAAGTTTAACTGCATATAGAATCTTCAGAAAGGGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN]

[+] EMBL CA755945             [CATCTTGGTGATCCTTCAAGTCGGTTCTGACTTCTCAATTGATATTCATGCATGCAGGATCAGACAAGAAGATGGCAATGAAGTACGACGTGCCGGTGAAGAGGCTGGTGTACCGGCCGTCGGCGATGCAGGCGGCGGTGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGCTGCCGGTGCTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACGAGATGCTGCTACGCCATCGACTGCAACATCCCCGGCAAGCCCTTCGGCGTCTGCGCCTTCTCTCCCCACACCTGCGACTGTGGTGCCACCAACTGCACCAGCCAACAGCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATCTCTTCCATGATCAATATACTTATGCGCCTGAATCATTCAACTGTTTTCTGATGCGATTGCAAACGTATTAAGTTTTTTCAGAGATTCTTGGGACTTAGATATCCTGACATGAGCATGTTGATCTGAAAGTTTAACTGCATATAGAATCTTCAGAAAGGGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN]


>consensus_9899#3 CATCTTGGTGATCCTTCAAGTCGGTTCTGACTTCTCAATTGATATTCATGCATGCAGGAT CAGACAAGAAGATGGCAATGAAGTACGACGTGCCGGTGAAGAGGCTGGTGTACCGGCCGT CGGCGATGCAGGCGGCGGTGATCGGCACGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGT GCATGGGCTGCCGGTGCTGCGCGTCGTCGAACGCGAGCAGCTGCGTGGACACGAGATGCT GCTACGCCATCGACTGCAACATCCCCGGCAAGCCCTTCGGCGTCTGCGCCTTCTCTCCCC ACACCTGCGACTGTGGTGCCACCAACTGCACCAGCCAACAGCAGCCATGACCACACACCT CTTGCTGCTGCTAATTCAATTCGATCTCTTCCATGATCAATATACTTATGCGCCTGAATC ATTCAACTGTTTTCTGATGCGATTGCAAACGTATTAAGTTTTTTCAGAGATTCTTGGGAC TTAGATATCCTGACATGAGCATGTTGATCTGAAAGTTTAACTGCATATAGAATCTTCAGA AAGGGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNN



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9899#0      TTTTTAATCCTCTTCTTCCCCGGCCCATGCATATTCTCTCTGCTTTAATGGTGTGAAATT 60
consensus_9899#3      ------------------------------------------------------------
consensus_9899#1      ------------------------------------------------------------
consensus_9899#2      ------------------------------------------------------------
                                                                                  

consensus_9899#0      TCAGAACAAGAATCTAGTTTCCGCATACAGAGTTCCAGAAATTTCCGACTGTTCATCTCA 120
consensus_9899#3      ------------------------------------------------------------
consensus_9899#1      ------------------------------------------------------------
consensus_9899#2      ------------------------------------------------------------
                                                                                  

consensus_9899#0      TCGATCATCCGCGATTCTTTTTTTAGTTTTTGATGGTGATCAGCCACACCGCTAGCTAGT 180
consensus_9899#3      ------------------------------------------------------------
consensus_9899#1      ------------------------------------------------------------
consensus_9899#2      ------------------------------------------------------------
                                                                                  

consensus_9899#0      TGACACATGTATGCAGTAGCAATATTTGTTAGCTGAAAAGGAAGCAAGGAGGAAAGCAGC 240
consensus_9899#3      ------------------------------------------------------------
consensus_9899#1      --------------------NGCAAAAGATCCTCATGTCTCCATCTCTCTCACCGGCCTC 40
consensus_9899#2      ------------------------------------------------------------
                                                                                  

consensus_9899#0      AAATCAGCTTTGTTGCCAAGCTGCTTGGCAGAGAGACAAAGTAATTGACCATGGCAAA-A 299
consensus_9899#3      ------------------------------------------------------------
consensus_9899#1      GCCATGGTCGTCTTCCTCATCTTCAGCTCCTCCTTCCTCCA-GGCCGCCCAAGGTACGTA 99
consensus_9899#2      ---TCAGTGTTCTTCCATTCTTTCCAGAGAGACAAAGT----AATTGACCATGGCAAA-A 52
                                                                                  

consensus_9899#0      GATCCTCATGTCTCCATCTCTCTCACCG-GCCTCGCCATGGTCGTCCTCCTCATCT-TCA 357
consensus_9899#3      ------------------------------CATCTTGGTGATCCTTCAAGTCGGTT-CTG 29
consensus_9899#1      CACACCTTCATCTTCACCTGCTTCATCATGCATCTTGGTGATCCTTCCAAAAGTCGATCG 159
consensus_9899#2      GATCCTCATGTCTCCATCTCTCTCACCG-GCCTCGCCATGGTCGTCTTCCTCATCT-TCA 110
                                                    * **    ** ** *               

consensus_9899#0      GCTCC--TCCTTCCTCCAGGCCGCCCA-AGGATCAGACAAGAAGATGGCAATGAAGTACG 414
consensus_9899#3      ACTTC--TCAATTGATATTCATGCATGCAGGATCAGACAAGAAGATGGCAATGAAGTACG 87
consensus_9899#1      GATTCCATTAATTGATTTTCATGCATGCAGGACCAGACAAGAAGATGGTGATGAAGTACG 219
consensus_9899#2      GCTCCTCCTTCCTCCAGGCCGCCCA---AGGACCAGACAAGAAGATGGTGATGAAGTACG 167
                        * *                  *    **** ***************  **********

consensus_9899#0      ACGTGCCGGTGAAGAGGCTGGTGTACCGGCCGTCGGCGATGCAGGCGGCGGTGATCGGCA 474
consensus_9899#3      ACGTGCCGGTGAAGAGGCTGGTGTACCGGCCGTCGGCGATGCAGGCGGCGGTGATCGGCA 147
consensus_9899#1      ACGTGCCGGTGAAGAGGTTGATGTACCGGCCG---------------GCGGCGATCGGCA 264
consensus_9899#2      ACGTGCCGGTGAAGAGGTTGATGTACCGGCCG---------------GCGGCGATCGGCA 212
                      ***************** ** ***********               **** ********

consensus_9899#0      CGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGC-TGCCGGTGCTGCGCGTCG 533
consensus_9899#3      CGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGC-TGCCGGTGCTGCGCGTCG 206
consensus_9899#1      CGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGC-TGCCGGTGCTGCGCGTCG 323
consensus_9899#2      CGGAGGCGGCGGCGTACGAGCCGTTCGAGCTGTGCATGGGNCTGCCGGTGCTGCGCGTCG 272
                      ****************************************  ******************

consensus_9899#0      TCGAACGCGAGCAGCTGCGTGGACACGAGATGCTGCTACGCCATCGACTGCAACATCCCC 593
consensus_9899#3      TCGAACGCGAGCAGCTGCGTGGACACGAGATGCTGCTACGCCATCGACTGCAACATCCCC 266
consensus_9899#1      TCGAACGCGAGCAGCTGCGTGGACACCCGGTGCTGCTACGCCATCGACTGCAACATCCCC 383
consensus_9899#2      TCGAACGCGAGCAGCTGCGTGGACACCCGGTGCTGCTACGCCATCGACTGCAACATCCCC 332
                      **************************  * ******************************

consensus_9899#0      GGCAAGCCCTTCGGCGTCTGCGCCTTCTCTCCCCACACCTGCGACTGTGGTGCCACCAAC 653
consensus_9899#3      GGCAAGCCCTTCGGCGTCTGCGCCTTCTCTCCCCACACCTGCGACTGTGGTGCCACCAAC 326
consensus_9899#1      GGCAAGCCCTTTCGGGTCTGCGACTTCTCCCANAACACCTGCGACTGTGGCGCCACCAAT 443
consensus_9899#2      GGCAAGCCCTTCGGCGTCTGCGCCTTCTCCCCCCACACCTGCGACTGTGGCGCCACCAAT 392
                      ***********  * ******* ****** *   **************** ******** 

consensus_9899#0      TGCACCAGCCAACAGCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATC 713
consensus_9899#3      TGCACCAGCCAACAGCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATC 386
consensus_9899#1      TGNACCAGCCA---GCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATC 500
consensus_9899#2      TGCACCAGCCA---GCAGCCATGACCACACACCTCTTGCTGCTGCTAATTCAATTCGATC 449
                      ** ********   **********************************************

consensus_9899#0      TCTTCCATGATCAATATACTTATGCGCCTGAATCATTCAACTGTTTTCTGATGCGATTGC 773
consensus_9899#3      TCTTCCATGATCAATATACTTATGCGCCTGAATCATTCAACTGTTTTCTGATGCGATTGC 446
consensus_9899#1      TCTTCCATGATCAATATGCATATGCGCCTGAATTATTCAACGGTTTTCTGATGCGATTGC 560
consensus_9899#2      TCTTCCATGATCAATATGCATATGCGCCTGAATTATTCAACGGTTTTCTGATGCGATTGC 509
                      ***************** * ************* ******* ******************

consensus_9899#0      AAACGTATTAAGTTTTTT----CAGAGATTCTTGGGACTTAGATAT-------------- 815
consensus_9899#3      AAACGTATTAAGTTTTTT----CAGAGATTCTTGGGACTTAGATAT-------------- 488
consensus_9899#1      AAACGTATTAAGTTTTTTTTTTCAGAGATTCTTGGGACT-AGATATGCTTAAGGATGTCA 619
consensus_9899#2      AAACGTATTAAGTTTTTTTTTTCAGAGATTCTTGGGACT-AGATATGCTTAAGGATGTCA 568
                      ******************    ***************** ******              

consensus_9899#0      -----CCTGACATGAGCATGTTGAT--CTGAAAGTTTAACTGCATATAGAATCTTCAGAA 868
consensus_9899#3      -----CCTGACATGAGCATGTTGAT--CTGAAAGTTTAACTGCATATAGAATCTTCAGAA 541
consensus_9899#1      TTGTACCTGANACGGGCATGTTGATATCTGAATGTTTAACTGCATATAGAATCTTCAGAA 679
consensus_9899#2      TTGTTCCTGACACGGGCATGTTGATATCTGAATGTTTAACTGCATATAGAATCTTCAGAA 628
                           ***** * * **********  ***** ***************************

consensus_9899#0      AGGGATTAA--------------------------------------------------- 877
consensus_9899#3      AGGGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 601
consensus_9899#1      AGGGATTAANTCTTGATCTACCAGTTCCACAAACAAAAA--------------------- 718
consensus_9899#2      AGGGATTAATTCTTGATCTACCAGTTCCCCAAAAAAAAAAAAAA---------------- 672
                      *******                                                     

consensus_9899#0      --------
consensus_9899#3      NNNNNNNN 609
consensus_9899#1      --------
consensus_9899#2      --------
                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)