These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9913#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1155 fasta sequence [GACCTCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGGGCCGGCCCGGCGCGTGGGCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAAAGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTGACGGAGGATTTTTCAGAGGAATTATTACCGTG] [+] EMBL CB643456 [GACCTCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGGGCCGGCCCGGCGCGTGGGCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAAAGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTANATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCAT ] [+] EMBL CB643415 [GACCTCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGGGCCGGCCCGGCGCGTGGGCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAAAGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCAAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGATAAGCGTAGCCATACTTACAGCGTCTCTG ] [+] EMBL CB643499 [GACCCCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGGGCCGGCCCGGCGCGTGGCCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAAAGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCATCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTA ] [+] EMBL AK073194 [ ACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTTACGGAGGATTTTTCAGAGGAATTATTACCGTG] [-] EMBL CB643416 [ CAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTGACGGAGGATTTTTCAGAGGA ] [-] EMBL CB643500 [ CGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTGACGGAGGATTTTTCAGAGGA ] [-] EMBL CB643457 [ AGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTCCCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTCTCAAGGACGGAGGATTTTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||