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Oryza sativa
cluster # 9922 cluster # 9922       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9922#0 length = 1245 sequences # 5  
consensus_9922#1 length = 824 sequences # 1  
consensus_9922#2 length = 777 sequences # 1  

consensusID : consensus_9922#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1245
fasta sequence
                              [AGATAATGCCATTTATCAAATAATCACTTGTTGGCATTGGCAACAACAATAGGACAAGTTGAATAACTCCTCCTTGGCAAAACTGCTAACTGTTACTCACTGATGATCATATGACATTGCAAATTTGCAATCTACAGAACAAGAAAGACAAAGAGAAGATCTGACTACTGTGTTCTGTTCTGAACTTCTTATGGGCAAGGGTTGGGATATCTTGCATGAACTTCATTGATCTCTGCAACAATCTCCTCAGAGAGATGGATCCTGGTGGCCTGAACAACTTCTGTAAGTTGCGAAATTTCTGTCGCGCCGAAAACAGCCGATGACACAAGGGGGTGCCTCAAAACAAACGCAACTGCTACAATCGCTGGCGAAATCCCATGCTTAGCAGAAATTTTTACGTATTCCTTCACAGCAGCTTTCATTTTGGGGTTCTGAAGATTATATCTGGATTCACCCTCAGAGTATCTCCCTTTGAAAAGATTCATTCTTGCATCTGGTGGGCCGCCATCATCCGATGAGTAATACTTCCCTGAAAGTATACCCATGGCCATTGGGCTGTAAGCTAGCAAGTTGATTCTCTCATGGTGGCAGCATTCAGCTAGCCCAGCATCAAAATTTCGACATAGCAGGTTATATGAGTTTTGCACTGTCAGTATCTTGGAGTGCAGCTGGGAATCTCTACTCAGTTGAAGGAACTTCATCAACCCATATGGTGTTTCATTGCTAAGGCCAATGTACCTAATCTTGCCAGCGTCTATGGCTCTTCCAAGAGCCAGTAGCTGCTCTTCCATTGGAACAGACATATACTGATGGCTTGGATCATATTCTGTCTCTCCAAACATCGGGACATAGCTTCCATCAATCGCCTCCGCGATGTTCCGCGAATCGAGCGACGCCGGCCCGCCGCGGATCCACGTCATCTCCCCGGACGGCCCGGCGACCTTAGTGGCGAGCACGACGCTGTCACGTGGGGCCCGGCGGGCCCGCAGCCAGCGGCCGAGGAACTCCTCGCTGCGCCCGTGCGTCTCACTGCGCTGTGGGACCGGGTACATCTCGGCGGAGTCGAAGAAGTTGACGCCGGCGTCGAATGCGGCGTCGAGGAGGCGGAGCGACTCCGGCAGCCGGCTCTGCTCCCCCATCGTCATCGTCCCGAAGCAGAGGCGGGAGACGGCGAGGTCGGGGGCGAGGTGGAAGGTGGGCATCGACATCGCCGTCGTCCTCCGCGCCGCACTGTGGCTAATCCCT]

[+] EMBL CB664876             [AGATAATGCCATTTATCAAATAATCACTTGTTGGCATTGGCAACAACAATAGGACAAGTTGAATAACTCCTCCTTGGCAAAACTGCTAACTGTTACTCACTGATGATCATATGACATTGCAAATTTGCAATCTACAGAACAAGAAAGACAAAGAGAAGATCTGACTACTGTGTTCTGTTCTGAACTTCTTATGGGCAAGGGTTGGGATATCTTGCATGAACTTCATTGATCTCTGCAACAATCTCCTCAGAGAGATGGATCCTGGTGGCCTGAACAACTTCTGTAAGTTGCGAAATTTCTGTCGCGCCGAAAACAGCCGATGACACAAGGGGGTGCCTCAAAACAAACGCAACTGCTACAATCGCTGGCGAAATCCCATGCTTAGCAGAAATTTTTACCTATTCCTTCACAGCAGCTTTCATTTTGGGGGTCTGAAGATTATATCTGGATTCACCCTCAGAGTATCTCCCTTTGAAAAGATTCATTCTTGCATCTGGAGGGCCGCCATCATCCGATGAGTAATACTTCCCTGAAAGTATACCCATGGCCATTGGGCTGTAAGCTAACAAGTTGATTCTCTCATGGTGGCAGCATTCAGCTAGCCCAGCATCAAAATTTCGACATAGCAGGTTATATGAGTTTTGCACTGTCAGTATCTTGGAGTGCAGCTGGGAATCTCTACTCAGTTGAAGGAACTTCATCAACCCATATGGTGTTTCATTGCTAAGGCCAATGTACCTAATCTTGCCAGCGTCTATGGCTCTTCCAAGAGCCAGTATCTGCTCTTCCATTGGAACAGACATATACTGATGGCTTGGATCATATTC                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB664835             [       GCAATTTATCAGATAATCACTTGATGGCATTGGCAACAACAATAGGACAAGTTGAATAACTCATCCTTGGCAAAACTGCTAACTGTTACTCACTGATGATCATATGACATTGCAAATTTGCAATCTACAGAACAAGAAAGACAAAGAGAAGATCTGACTACTGTGTTCTGTTCTGAACTTCTTATGGGCAAGGGTTGGGATATCTTGCATGAACTTCATTGATCTCTGCAACAATCTCCTCAGAGAGATGGATCCTGGTGGCCTGAAAAACTTCTGTAAGTTGCGAAATTTCTGTCGCGCCGAAAACAGCCGATGACACAAGGGGGTGCCTCAGAACAAACGCAACTGCTAGAATCGCTGGCGAAATCCCATGCTTAACAGAAATTTTTACGTATTCCTTCACAGCAGCTTTCATTTTGGGGTTCTGAAGATTATATCTGGATTCACCCTCAAAGTATCTCCCTTTGAAAAGATTCATTCTTGCATCTGGTGGGCCGCCATCATCCGATGAGTAATACTTCCCTGAAAGTATACCCATGGCCATTGGGCTGTAAGCTAGCAAGTTGATTCTCTCATGGTGGCAGCATTCAGCTAGCCCAGCATCAAAATTTCGACATAGCAGGTTATATGAGTTTTGCACTGTCAGTATCTTGGAGTGCAGCTGGGAATCTCTACTCAGTTGAAGGAACTTCATCAACCCATATGGTGTTTCATTGCTAAGGCCAATGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF195909             [                                                                                                                                                                                                                                                                                                                                                                                         gTGCTTAGCAGAAATTTTTACGTATTCCTTCACAGCAGCTTTCATTTTGGGGTTCTGAAGATTATATCTGGATTCACCCTCAGAGTATCTCCCTTTGAAAAGATTCATTCTTGCATCTGGTGGGCCGCCATCATCCGATGAGTAATACTTCCCTGAAAGTATACCCATGGCCATTGGGCTGTAAGCTAGCAAGCTGATTCTCTCATGGTGGCAGCATTCAGCTAGCCCAGCATCAAAATTTCGACATAGCAGGTTATATGAGTTTTGCACTGTCAGTATCTTGGAGTGCAGCTGGGAATCTCTACTCAGTTGAAGGAACTTCATCAACCCATATGGTGTTTCATTGCTAAGGCCAATGTACCTAATCTTGCCAGCGTCTATGGCTCTTCCAAGNNNCAGTNNCTGCTCTTCCATTGNNNCNGNCATATACTGATGGCTTGGATCATATTCTGTCTC                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB664875             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   gaCCGCCATCATCCGATGAGTAATACTTCCCTGAAAGTATACCCATGACCATTGGGCTGTAAGCTAGCAAGTTGATTCTCTCATGGTGGCAGCATTCAGCTAGCCCAGCATCAAAATTTCGACATAGCAGGTTATATGAGTATTGCACTGTCAGTATCTTGGAGTGCAGCCGGGAATCTGTACTCAGTGGAAGGAACTTCATCAACCCATATGGTGTTTCATTGCTAAGGCCAATGTACCTAATCTAGCCAGCGTGTATGGCTCTTCCAAGAGCCAGTAGCTGCTCTTCCATCGGAACAGACATATACTGATGGCTCGGATCATATTCAGTCTCTCCAAACATCGGGACATAGCTTCCATCAATCGCCTCCGCGATGTTCCGCGAATCGAGCGACGCCGGCCCGCCGCGGATCCACGTCATCTCCCCGGACGGCCCGGCGACCTTAGTGGCGAGCACGACGCTGTCACGTGGGGCCCGGCGGGCCCGCAGCCAGCGGCCGAGGAACTCCTCGCTGCGCCCGTGCGTCTCACTGCGCTGTGGGACCGGGTACATCTCGGCGGAGTCGAAGAAGTTGACGCCGGCGTCGAATGCGGCGTCGAGGAGGCGGAGCGACTCCGGCAGCCGGCTCTGCTCCCCCATCGTCATCGTCCCGAAGCAGAGGCGGGAGACGGCGAGGTCGGGGGCGAGGTGGAAGGTGGGCATCGACATCGCCGTCGTCCTCCGCGCCGCACTGTGGCTAATCCCT]
[-] EMBL CB664834             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCATCCGATGAGTAATACTTCCCTGAAAGTATACCCATGGCCATTGGGCTGTAAGCTAGCAAGTTGATTCTCTCATGGTGGCAGCATTCAGCTAGCCCAGCATCAAAATTTCGACATAGCAGGTTATATGAGTTTTGCACTGTCAGTATCTTGGAGTGCAGCTGGGAATCTCTACTCAGTTGAAGGAACTTCATCAACCCATATGGTGTTTCATTGCTAAGGCCAATGTACCTAATCTTGCCAGCGTCTATGGCTCTTCCAAGAGCCAGTAGCTGCTCTTCCATTGGAACAGACATATACTGATGGCTTGGATCATATTCTGTCTCTCCAAACATCGGGACATAGCTTCCATCAATCGCCTCCGCGATGTTCCGCGAATCGAGCGACGCCGGCCCGCCGCGGATCCACGTCATCTCCCCGGACGGCCCGGCGACCTTAGTGGCGAGCACGACGCTGTCACGTGGGGCCCGGCGGGCCCGCAGCCAGCGGCCGAGGAACTCCTCGCTGCGCCCGTGCGTCTCACTGCGCTGTGGGACCGGGTACATCTCGGCGGAGTCGAAGAAGTTGACGCCGGCGTCGAATGCGGCGTCGAGGAGGCGGAGCGACTCCGGCAGCCGGCTCTGCTCCCCCATCGTCATCGTCCCGAAGCAGAGGCGGGAGACGGCGAGGTCGGGGGCGAGGTGGAAGGTGGGCATCGACATCGCCGTCGTCCTCCGCGCCGCACTGTGGCTAATCCCT]


>consensus_9922#0 AGATAATGCCATTTATCAAATAATCACTTGTTGGCATTGGCAACAACAATAGGACAAGTT GAATAACTCCTCCTTGGCAAAACTGCTAACTGTTACTCACTGATGATCATATGACATTGC AAATTTGCAATCTACAGAACAAGAAAGACAAAGAGAAGATCTGACTACTGTGTTCTGTTC TGAACTTCTTATGGGCAAGGGTTGGGATATCTTGCATGAACTTCATTGATCTCTGCAACA ATCTCCTCAGAGAGATGGATCCTGGTGGCCTGAACAACTTCTGTAAGTTGCGAAATTTCT GTCGCGCCGAAAACAGCCGATGACACAAGGGGGTGCCTCAAAACAAACGCAACTGCTACA ATCGCTGGCGAAATCCCATGCTTAGCAGAAATTTTTACGTATTCCTTCACAGCAGCTTTC ATTTTGGGGTTCTGAAGATTATATCTGGATTCACCCTCAGAGTATCTCCCTTTGAAAAGA TTCATTCTTGCATCTGGTGGGCCGCCATCATCCGATGAGTAATACTTCCCTGAAAGTATA CCCATGGCCATTGGGCTGTAAGCTAGCAAGTTGATTCTCTCATGGTGGCAGCATTCAGCT AGCCCAGCATCAAAATTTCGACATAGCAGGTTATATGAGTTTTGCACTGTCAGTATCTTG GAGTGCAGCTGGGAATCTCTACTCAGTTGAAGGAACTTCATCAACCCATATGGTGTTTCA TTGCTAAGGCCAATGTACCTAATCTTGCCAGCGTCTATGGCTCTTCCAAGAGCCAGTAGC TGCTCTTCCATTGGAACAGACATATACTGATGGCTTGGATCATATTCTGTCTCTCCAAAC ATCGGGACATAGCTTCCATCAATCGCCTCCGCGATGTTCCGCGAATCGAGCGACGCCGGC CCGCCGCGGATCCACGTCATCTCCCCGGACGGCCCGGCGACCTTAGTGGCGAGCACGACG CTGTCACGTGGGGCCCGGCGGGCCCGCAGCCAGCGGCCGAGGAACTCCTCGCTGCGCCCG TGCGTCTCACTGCGCTGTGGGACCGGGTACATCTCGGCGGAGTCGAAGAAGTTGACGCCG GCGTCGAATGCGGCGTCGAGGAGGCGGAGCGACTCCGGCAGCCGGCTCTGCTCCCCCATC GTCATCGTCCCGAAGCAGAGGCGGGAGACGGCGAGGTCGGGGGCGAGGTGGAAGGTGGGC ATCGACATCGCCGTCGTCCTCCGCGCCGCACTGTGGCTAATCCCT



consensusID : consensus_9922#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 824
fasta sequence
                              [AAGNCTGNAGATAATGCANTTTATCAGATAATCNCTTGTGGCCTTGGCACCACCAATAGGNCAAGTTGAGTANCTCATCCTTGGCAAAANCTGCTANCTGTTACTCNCTGATGATCATATGNCATTGCAAATTTGCAATCTCCAGACCAAGAAAGCCAAAGAGAAGATCTGNCTACTGTGTTCTGTTTCTGANCTTCTTATGGGCAAGGGTTGGGATATCTTGCATGAACTTCATAGATCTCTGCAACAATCTCCTCAGAGAGATGGATCCTGGTGGCCTGAAGAACTTCTGTAAGTTGCGAAATTTCTGTCGCGCCGAAAACAGCCGATGACACAAGGGGGTGCCTCAGAACAAACGCAACTGCTAGAATCGCTGGCGAAATCCCGGGCTTAGCAGAAATTTTTACGTATTCCTTCACAGCAGCTTTCATTTTGGGGTTCTGAAGATTATATCTGGATTCACCCTCAGAGTATCTCCCTTTGAAAAGATTCATTCTTGCATCTGGTGGGCCGCCATCATCCGATGAGTAATACTTCCCTGAAAGTATACCCATGGCCATTGGGCTGTAAGCTAGCAAGCTGATTCTCTCATGGTGGCAGCATTCAGCTAGCCCAGCATCAAAATTTCGACATAGCAGGTTATATGAGTTTTGCACTGTCAGTATCTTGGAGTGCAGCTGGGAATCTCTACTCAGTTGAAGGAACTTCATCAACCCATATGGTGTTTCATTGCTAAGGCCAATGTACCTAATCTTGCCAGCGTCTATGGCTCTTCCAAGAGCCAGTAGCTGCTCTTCCATTGGAACAGACCCCCTTGTCTCGTC]

[-] EMBL CA767369             [AAGNCTGNAGATAATGCANTTTATCAGATAATCNCTTGTGGCCTTGGCACCACCAATAGGNCAAGTTGAGTANCTCATCCTTGGCAAAANCTGCTANCTGTTACTCNCTGATGATCATATGNCATTGCAAATTTGCAATCTCCAGACCAAGAAAGCCAAAGAGAAGATCTGNCTACTGTGTTCTGTTTCTGANCTTCTTATGGGCAAGGGTTGGGATATCTTGCATGAACTTCATAGATCTCTGCAACAATCTCCTCAGAGAGATGGATCCTGGTGGCCTGAAGAACTTCTGTAAGTTGCGAAATTTCTGTCGCGCCGAAAACAGCCGATGACACAAGGGGGTGCCTCAGAACAAACGCAACTGCTAGAATCGCTGGCGAAATCCCGGGCTTAGCAGAAATTTTTACGTATTCCTTCACAGCAGCTTTCATTTTGGGGTTCTGAAGATTATATCTGGATTCACCCTCAGAGTATCTCCCTTTGAAAAGATTCATTCTTGCATCTGGTGGGCCGCCATCATCCGATGAGTAATACTTCCCTGAAAGTATACCCATGGCCATTGGGCTGTAAGCTAGCAAGCTGATTCTCTCATGGTGGCAGCATTCAGCTAGCCCAGCATCAAAATTTCGACATAGCAGGTTATATGAGTTTTGCACTGTCAGTATCTTGGAGTGCAGCTGGGAATCTCTACTCAGTTGAAGGAACTTCATCAACCCATATGGTGTTTCATTGCTAAGGCCAATGTACCTAATCTTGCCAGCGTCTATGGCTCTTCCAAGAGCCAGTAGCTGCTCTTCCATTGGAACAGACCCCCTTGTCTCGTC]


>consensus_9922#1 AAGNCTGNAGATAATGCANTTTATCAGATAATCNCTTGTGGCCTTGGCACCACCAATAGG NCAAGTTGAGTANCTCATCCTTGGCAAAANCTGCTANCTGTTACTCNCTGATGATCATAT GNCATTGCAAATTTGCAATCTCCAGACCAAGAAAGCCAAAGAGAAGATCTGNCTACTGTG TTCTGTTTCTGANCTTCTTATGGGCAAGGGTTGGGATATCTTGCATGAACTTCATAGATC TCTGCAACAATCTCCTCAGAGAGATGGATCCTGGTGGCCTGAAGAACTTCTGTAAGTTGC GAAATTTCTGTCGCGCCGAAAACAGCCGATGACACAAGGGGGTGCCTCAGAACAAACGCA ACTGCTAGAATCGCTGGCGAAATCCCGGGCTTAGCAGAAATTTTTACGTATTCCTTCACA GCAGCTTTCATTTTGGGGTTCTGAAGATTATATCTGGATTCACCCTCAGAGTATCTCCCT TTGAAAAGATTCATTCTTGCATCTGGTGGGCCGCCATCATCCGATGAGTAATACTTCCCT GAAAGTATACCCATGGCCATTGGGCTGTAAGCTAGCAAGCTGATTCTCTCATGGTGGCAG CATTCAGCTAGCCCAGCATCAAAATTTCGACATAGCAGGTTATATGAGTTTTGCACTGTC AGTATCTTGGAGTGCAGCTGGGAATCTCTACTCAGTTGAAGGAACTTCATCAACCCATAT GGTGTTTCATTGCTAAGGCCAATGTACCTAATCTTGCCAGCGTCTATGGCTCTTCCAAGA GCCAGTAGCTGCTCTTCCATTGGAACAGACCCCCTTGTCTCGTC



consensusID : consensus_9922#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 777
fasta sequence
                              [AGCAAGCCAGGAATGAAAATTTGACAAAACCAGGTTATATGAGTTTGCACGGTCAGTATCTGGGAGTGCAGCTGGGAATCTCTACTCAGTGGAAGGAACTTCATCAACCCATATGGTGTTTCATTGCTAAGGCCAATGTACCTAATCCTGCCAGCGTCTAGGGCTCTTCCAAGAGCCAGTAGCTGCTCTTCCATTGGAACAGACATATACTGATGGCTTGGATCATATTCTGTCTCTCCAAACATCGGGACATAGCGATCAGGCCAATGTATCTGGTAAAGATCAATGTAATCCACTCCCAGCCTGCGCAAACTTCCATCAATCGCCTCCGCGATGTTCCGCGAATCGAGCGACGCCGGCCCGCCGCGGATCCACGTCATCTCCCCGGACGGCCCGGCGACCTTAGTGGCGAGCACGACGCTGTCACGTGGGGCCCGGCGGGCCCGCAGCCAGCGGCCGAGGATCTCCTCGCTGCGCCCGTGCGTCTCACTGCGCTGTGGGACCGGGTACATCTCGGCGGAGTCGAAGAAGTTGACGCCGGCGTCGAATGCGGCGTCGAGGAGGCGGAGCGACTCCGGCAGCCGGCTCTGCTCCCCCATCGTCATCGTCCCGAAGCAGAGGCGGGAGACGGCGAGGTCGGGGGCGAGGTGGAAGGTGGGCATCGACATCGCCGTCGTCCTCCGCGCCGCACTGTGGCTAATCCCTCTCCTCCGCCATGGAGGATTTGAGGAGGAAAAGACTGACGAACTAGCCTGTAGCAACTGCTCTATCCGCTTG]

[-] EMBL BE041016             [AGCAAGCCAGGAATGAAAATTTGACAAAACCAGGTTATATGAGTTTGCACGGTCAGTATCTGGGAGTGCAGCTGGGAATCTCTACTCAGTGGAAGGAACTTCATCAACCCATATGGTGTTTCATTGCTAAGGCCAATGTACCTAATCCTGCCAGCGTCTAGGGCTCTTCCAAGAGCCAGTAGCTGCTCTTCCATTGGAACAGACATATACTGATGGCTTGGATCATATTCTGTCTCTCCAAACATCGGGACATAGCGATCAGGCCAATGTATCTGGTAAAGATCAATGTAATCCACTCCCAGCCTGCGCAAACTTCCATCAATCGCCTCCGCGATGTTCCGCGAATCGAGCGACGCCGGCCCGCCGCGGATCCACGTCATCTCCCCGGACGGCCCGGCGACCTTAGTGGCGAGCACGACGCTGTCACGTGGGGCCCGGCGGGCCCGCAGCCAGCGGCCGAGGATCTCCTCGCTGCGCCCGTGCGTCTCACTGCGCTGTGGGACCGGGTACATCTCGGCGGAGTCGAAGAAGTTGACGCCGGCGTCGAATGCGGCGTCGAGGAGGCGGAGCGACTCCGGCAGCCGGCTCTGCTCCCCCATCGTCATCGTCCCGAAGCAGAGGCGGGAGACGGCGAGGTCGGGGGCGAGGTGGAAGGTGGGCATCGACATCGCCGTCGTCCTCCGCGCCGCACTGTGGCTAATCCCTCTCCTCCGCCATGGAGGATTTGAGGAGGAAAAGACTGACGAACTAGCCTGTAGCAACTGCTCTATCCGCTTG]


>consensus_9922#2 AGCAAGCCAGGAATGAAAATTTGACAAAACCAGGTTATATGAGTTTGCACGGTCAGTATC TGGGAGTGCAGCTGGGAATCTCTACTCAGTGGAAGGAACTTCATCAACCCATATGGTGTT TCATTGCTAAGGCCAATGTACCTAATCCTGCCAGCGTCTAGGGCTCTTCCAAGAGCCAGT AGCTGCTCTTCCATTGGAACAGACATATACTGATGGCTTGGATCATATTCTGTCTCTCCA AACATCGGGACATAGCGATCAGGCCAATGTATCTGGTAAAGATCAATGTAATCCACTCCC AGCCTGCGCAAACTTCCATCAATCGCCTCCGCGATGTTCCGCGAATCGAGCGACGCCGGC CCGCCGCGGATCCACGTCATCTCCCCGGACGGCCCGGCGACCTTAGTGGCGAGCACGACG CTGTCACGTGGGGCCCGGCGGGCCCGCAGCCAGCGGCCGAGGATCTCCTCGCTGCGCCCG TGCGTCTCACTGCGCTGTGGGACCGGGTACATCTCGGCGGAGTCGAAGAAGTTGACGCCG GCGTCGAATGCGGCGTCGAGGAGGCGGAGCGACTCCGGCAGCCGGCTCTGCTCCCCCATC GTCATCGTCCCGAAGCAGAGGCGGGAGACGGCGAGGTCGGGGGCGAGGTGGAAGGTGGGC ATCGACATCGCCGTCGTCCTCCGCGCCGCACTGTGGCTAATCCCTCTCCTCCGCCATGGA GGATTTGAGGAGGAAAAGACTGACGAACTAGCCTGTAGCAACTGCTCTATCCGCTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9922#0      --------AGATAATGCCATTTATCAAATAATCACTTGTTGGCATTGGCAACAACAATAG 52
consensus_9922#1      AAGNCTGNAGATAATGCANTTTATCAGATAATCNCTTGT-GGCCTTGGCACCACCAATAG 59
consensus_9922#2      -AGCAAGCCAGGAATGAAAATTTGACAAAACCAGGTTATATGAGTTTGCACGGTCAGTAT 59
                                  ****    **     * *     ** *  *  ** ***    ** ** 

consensus_9922#0      G-ACAAGTTGAATAACTCCTCCTTGGCAAAAC-TGCTAACTGTTACTCACTGATGATCAT 110
consensus_9922#1      G-NCAAGTTGAGTANCTCATCCTTGGCAAAANCTGCTANCTGTTACTCNCTGATGATCAT 118
consensus_9922#2      CTGGGAGTGCAGCTGGGAATCTCTACTCAGTGGAAGGAACT-TCATCAACCCAT-ATGGT 117
                           ***  *        **  *    *        * ** * *    *  ** **  *

consensus_9922#0      ATGACATTGCAAATTTGCAATCTACAGAACAAGAAAGACAAAGAGAAGATCTGACTACTG 170
consensus_9922#1      ATGNCATTGCAAATTTGCAATCTCCAGACCAAGAAAGCCAAAGAGAAGATCTGNCTACTG 178
consensus_9922#2      GTTTCATTGCTAAGGC-CAATGTAC---CTAATCCTGCCAGCGTCTAGGGCT-CTTCCAA 172
                       *  ****** **    **** * *     **    * **  *   **  **   * *  

consensus_9922#0      TGTTCTGTT-CTGAACTTCTTATGGGCAAGGGTTGG---GATATCTTGCATGAACTTCAT 226
consensus_9922#1      TGTTCTGTTTCTGANCTTCTTATGGGCAAGGGTTGG---GATATCTTGCATGAACTTCAT 235
consensus_9922#2      GAGCCAGTAGCTGCTCTTCCATTGGAACAGACATATACTGATGGCTTGGATCATATTCT- 231
                          * **  ***  ****   ***   **   *     ***  **** ** *  ***  

consensus_9922#0      TGATCTCTGCAACAATCTCCTCAGAGAGATGGATCCTGGTGGCCTGAACAACTTCTGTAA 286
consensus_9922#1      AGATCTCTGCAACAATCTCCTCAGAGAGATGGATCCTGGTGGCCTGAAGAACTTCTGTAA 295
consensus_9922#2      --GTCTCTCCAAACATCGGGACATAGCGATCAGGCCAATGTATCTGGTAAAGATCAAT-- 287
                         ***** ***  ***    ** ** ***    **       ***   **  **  *  

consensus_9922#0      GTTGCGAAATTTCTGTC-GCGCCGAAAACAGCCGAT-GACACAAGGGGGTGCCTCAAAAC 344
consensus_9922#1      GTTGCGAAATTTCTGTC-GCGCCGAAAACAGCCGAT-GACACAAGGGGGTGCCTCAGAAC 353
consensus_9922#2      GTAATCCACTCCCAGCCTGCGCAAACTTCCATCAATCGCCTCCGCGATGTTCCGCGAATC 347
                      **     * *  * * * ****  *   *   * ** * * *   *  ** ** *  * *

consensus_9922#0      AAACGCAACTG------CTACAATCGCTGGCGAAATCCCATGCTTAGCAGAAATTTTTAC 398
consensus_9922#1      AAACGCAACTG------CTAGAATCGCTGGCGAAATCCCGGGCTTAGCAGAAATTTTTAC 407
consensus_9922#2      GAGCGACGCCGGCCCGCCGCGGATCCACGTCATCTCCCCGGACGGCCCGGCGACCTTAGT 407
                       * **   * *      *    ***   * *     ***   *    * *  *  **   

consensus_9922#0      GTATTCCTTCACAGCAGCTTTCATTTTGGGGTTCTGAAGATTATATCTGGATTCACCCTC 458
consensus_9922#1      GTATTCCTTCACAGCAGCTTTCATTTTGGGGTTCTGAAGATTATATCTGGATTCACCCTC 467
consensus_9922#2      GG---CGAGCACGAC-GCTGTCACGT-GGGGCCCGGCGGGC-----CCGCAGCCAGCGGC 457
                      *    *   ***  * *** ***  * ****  * *  *       * * *  ** *  *

consensus_9922#0      AGAGTATCTCCCTTTGAAAAGATTCATTCTTGCATCTGGTGGGCCGCCATCATCCGATGA 518
consensus_9922#1      AGAGTATCTCCCTTTGAAAAGATTCATTCTTGCATCTGGTGGGCCGCCATCATCCGATGA 527
consensus_9922#2      CGAGGATCTCCTC-------GCTGCGCCCGTGCGTCTCACTGCGCTGTGGGACCGGGTAC 510
                       *** ******         * * *   * *** ***    *  *      * * * *  

consensus_9922#0      GTAATA-CTTCCCTGAAAGTATACCCATGGCCATTGGGC-TGTAAGCTAGCAAGTTGATT 576
consensus_9922#1      GTAATA-CTTCCCTGAAAGTATACCCATGGCCATTGGGC-TGTAAGCTAGCAAGCTGATT 585
consensus_9922#2      ATCTCGGCGGAGTCGAAGAAGTTGACGCCGGCGTCGAATGCGGCGTCGAGGAGGCGGAGC 570
                       *     *      ***    *   *   * * * *     *    * ** * *  **  

consensus_9922#0      CTCTCATGGTGGCAGCATTCAGCTAGCCCAGCATCAAAATTTCGACATAGCAGGTTATAT 636
consensus_9922#1      CTCTCATGGTGGCAGCATTCAGCTAGCCCAGCATCAAAATTTCGACATAGCAGGTTATAT 645
consensus_9922#2      GACTC-CGGCAGCCG-GCTCTGCTCCCCCATCGTCATCGTCCCGAAGCAG-AGGCGGGAG 627
                        ***  **  ** *   ** ***  **** * ***   *  ***   ** ***    * 

consensus_9922#0      GAGTTTTGCACTGTCAGTATCTTGGAGTGCAGCTGGGAATCTCTACTCAGTTGAAGGAAC 696
consensus_9922#1      GAGTTTTGCACTGTCAGTATCTTGGAGTGCAGCTGGGAATCTCTACTCAGTTGAAGGAAC 705
consensus_9922#2      ACG----GCGAGGTCGGGGGCGAGGTG-GAAGGTGGGCATC--GACATCGCCGTCG---- 676
                        *    **   *** *   *  ** * * ** **** ***   **   *  *  *    

consensus_9922#0      TTCATCAACCCATATGGTGTTTCATTGCTAAGGCCAATGTACCTAATCTTGCCAGCGTCT 756
consensus_9922#1      TTCATCAACCCATATGGTGTTTCATTGCTAAGGCCAATGTACCTAATCTTGCCAGCGTCT 765
consensus_9922#2      TCCTCCGCGCCGCACTGTGGCTAATCCCTCTCCTCCGC-CATGGAGGATTTGAGGAGGAA 735
                      * *  *   **  *  ***  * **  **     *     *   *   **    * *   

consensus_9922#0      ATGGCTCTTCCAAGAGCCAGTAGCTGCTCTTCCATTGGAACAGACATATACTGATGGCTT 816
consensus_9922#1      ATGGCTCTTCCAAGAGCCAGTAGCTGCTCTTCCATTGGAACAGACCCCCTTGTCTCGTC- 824
consensus_9922#2      AAGACTGACGAACTAGCCTGTAGCAACTGCTCTATCCGCTTG------------------ 777
                      * * **     *  **** *****  **  ** **  *                      

consensus_9922#0      GGATCATATTCTGTCTCTCCAAACATCGGGACATAGCTTCCATCAATCGCCTCCGCGATG 876
consensus_9922#1      ------------------------------------------------------------
consensus_9922#2      ------------------------------------------------------------
                                                                                  

consensus_9922#0      TTCCGCGAATCGAGCGACGCCGGCCCGCCGCGGATCCACGTCATCTCCCCGGACGGCCCG 936
consensus_9922#1      ------------------------------------------------------------
consensus_9922#2      ------------------------------------------------------------
                                                                                  

consensus_9922#0      GCGACCTTAGTGGCGAGCACGACGCTGTCACGTGGGGCCCGGCGGGCCCGCAGCCAGCGG 996
consensus_9922#1      ------------------------------------------------------------
consensus_9922#2      ------------------------------------------------------------
                                                                                  

consensus_9922#0      CCGAGGAACTCCTCGCTGCGCCCGTGCGTCTCACTGCGCTGTGGGACCGGGTACATCTCG 1056
consensus_9922#1      ------------------------------------------------------------
consensus_9922#2      ------------------------------------------------------------
                                                                                  

consensus_9922#0      GCGGAGTCGAAGAAGTTGACGCCGGCGTCGAATGCGGCGTCGAGGAGGCGGAGCGACTCC 1116
consensus_9922#1      ------------------------------------------------------------
consensus_9922#2      ------------------------------------------------------------
                                                                                  

consensus_9922#0      GGCAGCCGGCTCTGCTCCCCCATCGTCATCGTCCCGAAGCAGAGGCGGGAGACGGCGAGG 1176
consensus_9922#1      ------------------------------------------------------------
consensus_9922#2      ------------------------------------------------------------
                                                                                  

consensus_9922#0      TCGGGGGCGAGGTGGAAGGTGGGCATCGACATCGCCGTCGTCCTCCGCGCCGCACTGTGG 1236
consensus_9922#1      ------------------------------------------------------------
consensus_9922#2      ------------------------------------------------------------
                                                                                  

consensus_9922#0      CTAATCCCT 1245
consensus_9922#1      ---------
consensus_9922#2      ---------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)