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Oryza sativa
cluster # 9927 cluster # 9927       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9927#0 length = 1933 sequences # 6  
consensus_9927#1 length = 740 sequences # 1  

consensusID : consensus_9927#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1933
fasta sequence
                              [TCTTCGGGAAAGAGCCAAATGATTTTCCTTCTGATTTACGTGCTCAGATCCTCAGCTGGTTGTCGAATTGCCCAAGTGATATAGAGAGCTATATCAGGCCTGGCTGTATCATCCTAACTATTTACATGCGCCTCCCTAATTGGATGTGGGATAAGCTTGCTGCCGACCCAGCTCACTGGATACAGAAGCTAATTAGCTTGTCCACTGATACCTTGTGGAGAACAGGATGGATGTATGCAAGGGTGCAGGACTACCTGACATTGAGTTGCAACGGTAATCTTATGTTAGCGTCTCCCTGGCAGCCTGCAATAGGCAACAAGCATCAGATATTGTTTATAACCCCTATTGCAGTTGCTTGTTCTTCAACAGCAAACTTCTCAGTGAAAGGTCTCAACATAGCTCAACCAACCACAAAATTACTTTGCATTTTTGGTGGGAAGTATCTAATCCAAGAAGCAACAGAAAAGCTACTTGATGATACTAAAATGCAGCGAGGCCCTCAGTGTCTGACCTTCTCTTGCTCCTTTCCTAGTACTAGTGGAAGAGGATTCATAGAGGTTGAAGATCTTGATCAAAGCAGCCTTTCATTTCCCTTTGTTGTTGCTGAAGAAGATGTATGTTCTGAAATTCGAACACTGGAACATTTACTGAATCTGGTTTCATTTGATGACACCTTGGTAGAGAAAAACGATTTGTTGGCTTCTCGAGATCGAGCCTTAAATTTTTTACACGAATTTGGTTGGTTTCTTCAAAGGAGCCACATACGAGCTACATCTGAGACTCCAAAAGATTGTACTGAGGGCTTTCCTGCTGCAAGATTTAGATGGTTGCTGTCCTTTGCAGTTGATCGGGAATTTTGTGCTGTTATAAAGAAGCTTCTGGACACCTTGTTTCAGGGTGGTGTTGATCTGGATGTCCAATCAACAGTTGAATTTGTCCTGAAACAAGATTTAGTATTTGTGGCTGTCAACAAACGGTCGAAGCCTTTAATTGACTTTCTGTTGACATACACAACATCTTCTGCTCCAATGGACGGAACTGAAAGTGCTGCTCCAGCTCAGTTCTTGTTTACACCTGACATAGCTGGTCCATCAGATATTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTGGTGTTTTAGATGCTTTAACTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATGCTCGCGATGCTACTGGATTGACT-CCGGAGGATTACGCTC-GGAAGAGAGGCCACGAATCCTACATCGAGATGGTCCAGAACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCACCATATCCAGCACCACATCCACCACCGACTTCACCGAAAAGCACGCGAGCCA-ATCGAAGACTACAGATCAAACCGCATTTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCACTGAGCTGCAGGCAGTGTCTCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGTCAACCAGGCCAGCAGTACTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGTTGATCATGCAGGGGCCACCCCACATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTTTGCGTTCAGGCCCCAAGTGATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCAGCTGTATCATGCAGCATGGAGATGTTTTGCTTCGAGTCTGTATATTCTTGTAACATAGATTTATCTTTTCACGGAATAACTATATTTGTTTACTACTTTACTGTACAACATTTAGAATTCGAAACTTGCATATCTAGAAATTCCATTGGACAGGCATAAAAACCTTGATAGAATGCAGTACTATCTGAATGGTTTTACCGTGAGCAGAGCAGCTGACAGAGTGACAGTGCTTCCATGCTCTTTAATAATACTC]

[+] EMBL AK068471             [TCTTCGGGAAAGAGCCAAATGATTTTCCTTCTGATTTACGTGCTCAGATCCTCAGCTGGTTGTCGAATTGCCCAAGTGATATAGAGAGCTATATCAGGCCTGGCTGTATCATCCTAACTATTTACATGCGCCTCCCTAATTGGATGTGGGATAAGCTTGCTGCCGACCCAGCTCACTGGATACAGAAGCTAATTAGCTTGTCCACTGATACCTTGTGGAGAACAGGATGGATGTATGCAAGGGTGCAGGACTACCTGACATTGAGTTGCAACGGTAATCTTATGTTAGCGTCTCCCTGGCAGCCTGCAATAGGCAACAAGCATCAGATATTGTTTATAACCCCTATTGCAGTTGCTTGTTCTTCAACAGCAAACTTCTCAGTGAAAGGTCTCAACATAGCTCAACCAACCACAAAATTACTTTGCATTTTTGGTGGGAAGTATCTAATCCAAGAAGCAACAGAAAAGCTACTTGATGATACTAAAATGCAGCGAGGCCCTCAGTGTCTGACCTTCTCTTGCTCCTTTCCTAGTACTAGTGGAAGAGGATTCATAGAGGTTGAAGATCTTGATCAAAGCAGCCTTTCATTTCCCTTTGTTGTTGCTGAAGAAGATGTATGTTCTGAAATTCGAACACTGGAACATTTACTGAATCTGGTTTCATTTGATGACACCTTGGTAGAGAAAAACGATTTGTTGGCTTCTCGAGATCGAGCCTTAAATTTTTTACACGAATTTGGTTGGTTTCTTCAAAGGAGCCACATACGAGCTACATCTGAGACTCCAAAAGATTGTACTGAGGGCTTTCCTGCTGCAAGATTTAGATGGTTGCTGTCCTTTGCAGTTGATCGGGAATTTTGTGCTGTTATAAAGAAGCTTCTGGACACCTTGTTTCAGGGTGGTGTTCATCTGGATGTCCAATCAACAGTTGAATTTGTCCTGAAACAAGATTTAGTATTTGTGGCTGTCAACAAACGGTCGAAGCCTTTAATTGACTTTCTGTTGACATACACAACATCTTCTGCTCCAATGGACGGAACTGAAAGTGCTGCTCCAGCTCAGTTCTTGTTTACACCTGACATAGCTGGTCCATCAGATATTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTGGTGTTTTAGATGCTTTAACTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATGCTCGCGATGCTACTGGATTGACT CCGGAGGATTACGCTC GGAAGAGAGGCCACGAATCCTACATCGAGATGGTCCAGAACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCACCATATCCAGCACCACATCCACCACCGACTTCACCGAAAAGCACGCGAGCCA ATCGAAGACTACAGATCAAACCGCATTTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCACTGAGCTGCAGGCAGTGTCTCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGTCAACCAGGCCAGCAGTACTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGTTGATCATGCAGGGGCCACCCCACATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTTTGCGTTCAGGCCCCAAGTGATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCAGCTGTATCATGCAGCATGGAGATGTTTTGCTTCGAGTCTGTATATTCTTGTAACATAGATTTATCTTTTCACGGAATAACTATATTTGTTTACTACTTTACTGTGCAACATTTAGAATTCGAAACTTGCATATCTAGAAATTCCATTGGACAGGCATCCTGACCTTGATAGAATGCAGTACTATCTGAATGGTTTTACCGTGAGCAGAGCAGCTGACAGAGTGACAGTGCTTCCATGCTCTTTAATAATACTC]
[+] EMBL AK072849             [TCTTCGGGAAAGAGCCAAATGATTTTCCTTCTGATTTACGTGCTCAGATCCTCAGCTGGTTGTCGAATTGCCCAAGTGATATAGAGAGCTATATCAGGCCTGGCTGTATCATCCTAACTATTTACATGCGCCTCCCTAATTGGATGTGGGATAAGCTTGCTGCCGACCCAGCTCACTGGATACAGAAGCTAATTAGCTTGTCCACTGATACCTTGTGGAGAACAGGATGGATGTATGCAAGGGTGCAGGACTACCTGACATTGAGTTGCAACGGTAATCTTATGTTAGCGTCTCCCTGGCAGCCTGCAATAGGCAACAAGCATCAGATATTGTTTATAACCCCTATTGCAGTTGCTTGTTCTTCAACAGCAAACTTCTCAGTGAAAGGTCTCAACATAGCTCAACCAACCACAAAATTACTTTGCATTTTTGGTGGGAAGTATCTAATCCAAGAAGTAACAGAAAAGCTACTTGATGATACTAAAATGCAGCGAGGCCCTCAGTGTCTGACCTTCTCTTGCTCCTTTCCTAGTACTAGTGGAAGAGGATTCATAGAGGTTGAAGATCTTGATCAAAGCAGCCTTTCATTTCCCTTTGTTGTTGCTGAAGAAGATGTATGTTCTGAAATTCGAACACTGGAACATTTACTGAATCTGGTTTCATTTGATGACACCTTGGTAGAGAAAAACGATTTGTTGGCTTCTCGAGATCGAGCCTTAAATTTTTTACACGAATTTGGTTGGTTTCTTCAAAGGAGCCACATACGAGCTACATCTGAGACTCCAAAAGATTGTACTGAGGGCTTTCCTGCTGCAAGATTTAGATGGTTGCTGTCCTTTGCAGTTGATCGGGAATTTTGTGCTGTTATAAAGAAGCTTCTGGACACCTTGTTTCAGGGTGGTGTTGATCTGGATGTCCAATCAACAGTTGAATTTGTCCTGAAACAAGATTTAGTATTTGTGGCTGTCAACAAACGGTCGAAGCCTTTAATTGACTTTCTGTTGACATACACAACATCTTCTGCTCCAATGGACGGAACTGAAAGTGCTGCTCCAGCTCAGTTCTTGTTTACACCTGACATAGCTGGTCCATCAGATATTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTGGTGTTTTAGATGCTTTAACTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATGCTCGCGATGCTACTGGATTGACT CCGGAGGATTACGCTC GGAAGAGAGGCCACGAATCCTACATCGAGATGGTCCAGAACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCACCATATCCAGCACCACATCCACCACCGACTTCACCGAAAAGCACGCGAGCCA ATCGAAGACTACAGATCAAACCGCGTTTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCACTGAGCTGCAGGCAGTGTCTCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGTCAACCAGGCCAGCAGTACTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGTTGATCATGCAGGGGCCACCCCACATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTTTGCGTTCAGGCCCCAAGTGATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCAGCTGTATCATGCAGCATGGAGAT TTCTGCTTCGAGTCTGTATATTCTTGTAACATAGATTTATCTTTTCACGGAATAACTATATTTGTTTACTACTTTACTGTACAACATTTAGAATTCGAAACTTGCATATCTAGAAATTCCATTGGACAGGCAT                                                                                                ]
[+] EMBL CB679506             [                                                                                                                                                                                                                                                                                                                                                                                                                                                GTGGGCATTATATAATCCAAGAAGCAACAGAAAAGCTACTTGATGATACTAAAATGCAGCGAGGCCCTCAGTGTCTGACCTTCTCTTGCTCCTTTCCTAGTACTAGTGGAAGAGGATTCATAGAGGTTGAAGATCTTGATCAAAGCAGCCTTTCATTTCCCTTTGTTGTTGCTGAAGAAGATGTATGTTCTGAAATTCGAACACTGGAACATTTACTGAATCTGGTTTCATTTGATGACACCTTGGTAGAGAAAAACGATTTGTTGGCTTCTCGAGATCGAGCCTTAAATTTTTTACACGAATTTGGTTGGTTTCTTCAAAGGAGCCACATACGAGCTACATCTGAGACTCCAAAAGATTGTACTGAGGGCTTTCCTGCTGCAAGATTTAGATGGTTGCTGTCCTTTGCAGTTGATCGGGAATTTTGTGCTGTTATAAAGAAGCTTCTGGACACCTTGTTTCAGGGTGGTGTTGATCTGGATGTCCAATCAACAGTTGAATTTGTCCTGAAACAAGATTTAGTATTTGTGGCTGTCAACAAACGGTCGAAGCCTTTAATTGACTTTCTGTTGACATACACAACATCTTCTGCTCCAATGGACGGAACTGAAAGTGCTGCTCCAGCTCAGTTCTTGTTTACACCTGACATAGCTGGTCCATCAGATATTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTGGTGTTTTAGATGCTTTAACTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATGCTCGCGATGCTACTGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB679507             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCAGTTCTTGTTTACACCTGACATAGCTGGTCCATCAGATATTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTGGTGTTTTAGATGCTTTAACTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATGCTCGCGATGCTACTGGATTGACT CCGGAGGATTACGCTC GGAAGAGAGGCCACGAATCCTACATCGAGATGGTCCAGAACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCACCATATCCAGCACCACATCCACCACCGACTTCACCGAAAAGCACGCGAGCCA ATCGAAGACTACAGATCAAACCGCATTTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCACTGAGCTGCAGGCAGTGTCTCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGTCAACCAGGCCAGCAGTACTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGTTGATCATGCAGGGGCCACCCCACATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTTTGCGTTCAGGCCCCAAGTGATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCAGCTGTATCATGCAGCATGGAGATGTTTTGCTTCGAGTCTGTATATTCTTGTAACATAGATTTATCTTTTCACGGAATAACTATATTTGTTTACTACTTTACTGTACAACATTTAGAATTCGAAACTTGCATATAGAGAAATTCCATTGGACAGGC                                                                                                  ]
[+] EMBL BQ907076             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATTGACTCCCGGAGGATTACGCTCGGGAAGAGA GCCACGAATCCTACATCGAGATGGTCCAGAACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCACCATATCCAGCACCACATCCACCACCGACTTCACCGAAAAGCACGCGAGCCACATCGAAGACTACAGATCAAACCGCATTTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCACTGAGCTGCAGGCAGTGTCTCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGTCAACCAGGCCAGCAGTACTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGTTGATCATGCAGGGGCCACCCCACATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTTTGCGTTCAGGCCCCAAGTGATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCAGCTGTATCATGCAGCATGGAGATGTTTTGCTTCGAGTCTGTATATTCTTGTAACATAGATTTATCTTTTTACGGAATAACTATATTTGTTTACTACTTTACTGTACAACATTTAGAATTCGAAACTTGCATATCTAGAAATTCCATTGGACAAAAAAAAAA                                                                                            ]
[+] EMBL BQ906611             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCCAGCAGTACTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGTTGATCATGCAGGGGCCACCCCACATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTTTGCGTTCAGGCCCCAAGTGATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCAGCTGTATCATGCAGCATGGAGATGTTTTGCTTCGAGTCTGTATATTCTTGTAACATAGATTTATCTTTTTACGGAATAACTATATTTGTTTACTACTTTACTGTACAACATTTAGAATTCGAAACTTGCATATCTANCAATTCCATTGGACAAAAAAAAAA                                                                                            ]


>consensus_9927#0 TCTTCGGGAAAGAGCCAAATGATTTTCCTTCTGATTTACGTGCTCAGATCCTCAGCTGGT TGTCGAATTGCCCAAGTGATATAGAGAGCTATATCAGGCCTGGCTGTATCATCCTAACTA TTTACATGCGCCTCCCTAATTGGATGTGGGATAAGCTTGCTGCCGACCCAGCTCACTGGA TACAGAAGCTAATTAGCTTGTCCACTGATACCTTGTGGAGAACAGGATGGATGTATGCAA GGGTGCAGGACTACCTGACATTGAGTTGCAACGGTAATCTTATGTTAGCGTCTCCCTGGC AGCCTGCAATAGGCAACAAGCATCAGATATTGTTTATAACCCCTATTGCAGTTGCTTGTT CTTCAACAGCAAACTTCTCAGTGAAAGGTCTCAACATAGCTCAACCAACCACAAAATTAC TTTGCATTTTTGGTGGGAAGTATCTAATCCAAGAAGCAACAGAAAAGCTACTTGATGATA CTAAAATGCAGCGAGGCCCTCAGTGTCTGACCTTCTCTTGCTCCTTTCCTAGTACTAGTG GAAGAGGATTCATAGAGGTTGAAGATCTTGATCAAAGCAGCCTTTCATTTCCCTTTGTTG TTGCTGAAGAAGATGTATGTTCTGAAATTCGAACACTGGAACATTTACTGAATCTGGTTT CATTTGATGACACCTTGGTAGAGAAAAACGATTTGTTGGCTTCTCGAGATCGAGCCTTAA ATTTTTTACACGAATTTGGTTGGTTTCTTCAAAGGAGCCACATACGAGCTACATCTGAGA CTCCAAAAGATTGTACTGAGGGCTTTCCTGCTGCAAGATTTAGATGGTTGCTGTCCTTTG CAGTTGATCGGGAATTTTGTGCTGTTATAAAGAAGCTTCTGGACACCTTGTTTCAGGGTG GTGTTGATCTGGATGTCCAATCAACAGTTGAATTTGTCCTGAAACAAGATTTAGTATTTG TGGCTGTCAACAAACGGTCGAAGCCTTTAATTGACTTTCTGTTGACATACACAACATCTT CTGCTCCAATGGACGGAACTGAAAGTGCTGCTCCAGCTCAGTTCTTGTTTACACCTGACA TAGCTGGTCCATCAGATATTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTG GTGTTTTAGATGCTTTAACTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATG CTCGCGATGCTACTGGATTGACTCCGGAGGATTACGCTCGGAAGAGAGGCCACGAATCCT ACATCGAGATGGTCCAGAACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCA CCATATCCAGCACCACATCCACCACCGACTTCACCGAAAAGCACGCGAGCCAATCGAAGA CTACAGATCAAACCGCATTTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCAC TGAGCTGCAGGCAGTGTCTCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGT CAACCAGGCCAGCAGTACTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGT TGATCATGCAGGGGCCACCCCACATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTT TGCGTTCAGGCCCCAAGTGATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCA GCTGTATCATGCAGCATGGAGATGTTTTGCTTCGAGTCTGTATATTCTTGTAACATAGAT TTATCTTTTCACGGAATAACTATATTTGTTTACTACTTTACTGTACAACATTTAGAATTC GAAACTTGCATATCTAGAAATTCCATTGGACAGGCATAAAAACCTTGATAGAATGCAGTA CTATCTGAATGGTTTTACCGTGAGCAGAGCAGCTGACAGAGTGACAGTGCTTCCATGCTC TTTAATAATACTC



consensusID : consensus_9927#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 740
fasta sequence
                              [ATTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTGGTGTTTTAGATGCTTTAACTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATGCTCGCGATGCTACTGGATTGACTCCGGAGGATTACGCTCGGAAGAGAGGCCACGAATCCTACATCGAGATGGTCCAGAACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCACCATATCCAGCACCACATCCACCACCGACTTCACCGAAAAGCACGCGAGCCAATCGAAGACTACAGATCAAACCGCATTTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCACTGAGCTGCAGGCAGTGTCTCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGTCAACCAGGCCAGCAGTACTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGTTGATCATGCAGGGGCCACCCCCCATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTTTGCGTTCAGGCCCCAAGTGATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCAGCTGTATCATGCAGCATGGAGATGTTTTGCTTCGAGTCTGTATATTCTTGTAACATAGATTTATCTTTTCACGGAATAACTATATTTGTTTACTACTTTACTGTACACCATTTAGAATTCGAAACTTGCATATCTAGAAATTCCAAAAAAAAAAAGA]

[-] EMBL CB666622             [ATTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTGGTGTTTTAGATGCTTTAACTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATGCTCGCGATGCTACTGGATTGACTCCGGAGGATTACGCTCGGAAGAGAGGCCACGAATCCTACATCGAGATGGTCCAGAACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCACCATATCCAGCACCACATCCACCACCGACTTCACCGAAAAGCACGCGAGCCAATCGAAGACTACAGATCAAACCGCATTTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCACTGAGCTGCAGGCAGTGTCTCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGTCAACCAGGCCAGCAGTACTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGTTGATCATGCAGGGGCCACCCCCCATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTTTGCGTTCAGGCCCCAAGTGATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCAGCTGTATCATGCAGCATGGAGATGTTTTGCTTCGAGTCTGTATATTCTTGTAACATAGATTTATCTTTTCACGGAATAACTATATTTGTTTACTACTTTACTGTACACCATTTAGAATTCGAAACTTGCATATCTAGAAATTCCAAAAAAAAAAAGA]


>consensus_9927#1 ATTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTGGTGTTTTAGATGCTTTA ACTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATGCTCGCGATGCTACTGGA TTGACTCCGGAGGATTACGCTCGGAAGAGAGGCCACGAATCCTACATCGAGATGGTCCAG AACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCACCATATCCAGCACCACA TCCACCACCGACTTCACCGAAAAGCACGCGAGCCAATCGAAGACTACAGATCAAACCGCA TTTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCACTGAGCTGCAGGCAGTGT CTCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGTCAACCAGGCCAGCAGTA CTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGTTGATCATGCAGGGGCCA CCCCCCATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTTTGCGTTCAGGCCCCAAG TGATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCAGCTGTATCATGCAGCAT GGAGATGTTTTGCTTCGAGTCTGTATATTCTTGTAACATAGATTTATCTTTTCACGGAAT AACTATATTTGTTTACTACTTTACTGTACACCATTTAGAATTCGAAACTTGCATATCTAG AAATTCCAAAAAAAAAAAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9927#0      TCTTCGGGAAAGAGCCAAATGATTTTCCTTCTGATTTACGTGCTCAGATCCTCAGCTGGT 60
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      TGTCGAATTGCCCAAGTGATATAGAGAGCTATATCAGGCCTGGCTGTATCATCCTAACTA 120
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      TTTACATGCGCCTCCCTAATTGGATGTGGGATAAGCTTGCTGCCGACCCAGCTCACTGGA 180
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      TACAGAAGCTAATTAGCTTGTCCACTGATACCTTGTGGAGAACAGGATGGATGTATGCAA 240
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      GGGTGCAGGACTACCTGACATTGAGTTGCAACGGTAATCTTATGTTAGCGTCTCCCTGGC 300
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      AGCCTGCAATAGGCAACAAGCATCAGATATTGTTTATAACCCCTATTGCAGTTGCTTGTT 360
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      CTTCAACAGCAAACTTCTCAGTGAAAGGTCTCAACATAGCTCAACCAACCACAAAATTAC 420
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      TTTGCATTTTTGGTGGGAAGTATCTAATCCAAGAAGCAACAGAAAAGCTACTTGATGATA 480
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      CTAAAATGCAGCGAGGCCCTCAGTGTCTGACCTTCTCTTGCTCCTTTCCTAGTACTAGTG 540
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      GAAGAGGATTCATAGAGGTTGAAGATCTTGATCAAAGCAGCCTTTCATTTCCCTTTGTTG 600
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      TTGCTGAAGAAGATGTATGTTCTGAAATTCGAACACTGGAACATTTACTGAATCTGGTTT 660
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      CATTTGATGACACCTTGGTAGAGAAAAACGATTTGTTGGCTTCTCGAGATCGAGCCTTAA 720
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      ATTTTTTACACGAATTTGGTTGGTTTCTTCAAAGGAGCCACATACGAGCTACATCTGAGA 780
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      CTCCAAAAGATTGTACTGAGGGCTTTCCTGCTGCAAGATTTAGATGGTTGCTGTCCTTTG 840
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      CAGTTGATCGGGAATTTTGTGCTGTTATAAAGAAGCTTCTGGACACCTTGTTTCAGGGTG 900
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      GTGTTGATCTGGATGTCCAATCAACAGTTGAATTTGTCCTGAAACAAGATTTAGTATTTG 960
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      TGGCTGTCAACAAACGGTCGAAGCCTTTAATTGACTTTCTGTTGACATACACAACATCTT 1020
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      CTGCTCCAATGGACGGAACTGAAAGTGCTGCTCCAGCTCAGTTCTTGTTTACACCTGACA 1080
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      TAGCTGGTCCATCAGATATTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTG 1140
consensus_9927#1      -----------------ATTACACCTCTTCATATTGCAGCCACATACAGTGATACTGCTG 43
                                       *******************************************

consensus_9927#0      GTGTTTTAGATGCTTTAACTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATG 1200
consensus_9927#1      GTGTTTTAGATGCTTTAACTGATGATCCTCAGCAGCTGGGAATCAAAGCATGGAAGAATG 103
                      ************************************************************

consensus_9927#0      CTCGCGATGCTACTGGATTGACTCCGGAGGATTACGCTCGGAAGAGAGGCCACGAATCCT 1260
consensus_9927#1      CTCGCGATGCTACTGGATTGACTCCGGAGGATTACGCTCGGAAGAGAGGCCACGAATCCT 163
                      ************************************************************

consensus_9927#0      ACATCGAGATGGTCCAGAACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCA 1320
consensus_9927#1      ACATCGAGATGGTCCAGAACAAGATTGACAGCAGGTTACCCAAAGCTCATGTGTCTGTCA 223
                      ************************************************************

consensus_9927#0      CCATATCCAGCACCACATCCACCACCGACTTCACCGAAAAGCACGCGAGCCAATCGAAGA 1380
consensus_9927#1      CCATATCCAGCACCACATCCACCACCGACTTCACCGAAAAGCACGCGAGCCAATCGAAGA 283
                      ************************************************************

consensus_9927#0      CTACAGATCAAACCGCATTTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCAC 1440
consensus_9927#1      CTACAGATCAAACCGCATTTGATGTGGAGAAGGGCCAACAGATCAGCACAAAGCCACCAC 343
                      ************************************************************

consensus_9927#0      TGAGCTGCAGGCAGTGTCTCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGT 1500
consensus_9927#1      TGAGCTGCAGGCAGTGTCTCCCAGAACTCGCTTACCGGCATCATTTGAACAGGTTTCTGT 403
                      ************************************************************

consensus_9927#0      CAACCAGGCCAGCAGTACTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGT 1560
consensus_9927#1      CAACCAGGCCAGCAGTACTCTCCTTGGTCGCCATTGCTGCTGTCTGTGTCTGTGTAGGGT 463
                      ************************************************************

consensus_9927#0      TGATCATGCAGGGGCCACCCCACATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTT 1620
consensus_9927#1      TGATCATGCAGGGGCCACCCCCCATTGGAGGTATGAGAGGTCCTTTCCGCTGGAATTCTT 523
                      ********************* **************************************

consensus_9927#0      TGCGTTCAGGCCCCAAGTGATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCA 1680
consensus_9927#1      TGCGTTCAGGCCCCAAGTGATATGGTAGATTGACTGCCAAGCATCTGCAAATACAGTTCA 583
                      ************************************************************

consensus_9927#0      GCTGTATCATGCAGCATGGAGATGTTTTGCTTCGAGTCTGTATATTCTTGTAACATAGAT 1740
consensus_9927#1      GCTGTATCATGCAGCATGGAGATGTTTTGCTTCGAGTCTGTATATTCTTGTAACATAGAT 643
                      ************************************************************

consensus_9927#0      TTATCTTTTCACGGAATAACTATATTTGTTTACTACTTTACTGTACAACATTTAGAATTC 1800
consensus_9927#1      TTATCTTTTCACGGAATAACTATATTTGTTTACTACTTTACTGTACACCATTTAGAATTC 703
                      *********************************************** ************

consensus_9927#0      GAAACTTGCATATCTAGAAATTCCATTGGACAGGCATAAAAACCTTGATAGAATGCAGTA 1860
consensus_9927#1      GAAACTTGCATATCTAGAAATTCCA----AAAAAAAAAAGA------------------- 740
                      *************************    * *   * ** *                   

consensus_9927#0      CTATCTGAATGGTTTTACCGTGAGCAGAGCAGCTGACAGAGTGACAGTGCTTCCATGCTC 1920
consensus_9927#1      ------------------------------------------------------------
                                                                                  

consensus_9927#0      TTTAATAATACTC 1933
consensus_9927#1      -------------
                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)