These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9935#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1928 fasta sequence [TACTTGGATACCGTCCGGTCGCGTGCTG-GTTCTGCTCCTTCGCTGTTTAGACGCGTAATCCGCATGAACAATCCTGTCTCGATTTCATACTGATGATATTTGATCTGCTGCGCGGCTGCTCGTTACGTTGGGTGTTATTTGATAGTATTTCCTTGTGTTCTTGAGCTTGGTAAGTAAAGTGGTGCCGTGTCGGGTGTGAGGTTTTGGCATGCCCGCGGGGGCGAGGTCATGGCTCGCCGACCTGCGCGCGCGGTTCGGTGGCGGCGCCAGGGAGGAGGCGGGTCTCGGGATCCTGGCGTTCGAGGCGGCGGCGGCCATGTCGCGGC-TCGTGTCGCTCCACCGCTCGCTGTCTGACGTGGAGGTCAGGAGGCTCCGCGCGGACGCGCTGCGCGCCGAGGGCGTCGCGCGCGTCACGTCCACGGACCAGTCGCTCCTGCTCCGGCTCGCGTGCGGCGAGTTCGTGGCGGACCTCGACCATGCCGCCGGCACTGCCGCGCGCCTCGGGGCGCGGTGCTGCGCGGGCGCGCCGTTCCTGCACGATTTCGACCGCGTCTACGCCGAGGCGAAGCGCGGGAACGGCCTCGCGCGGCTGGACGCGACGGTTGGGTTCTACAGGGGCGCGGCGAAGCGGTTCAGGAAGATGGAGCGGCACGTGGCTGCGACGGCGAAGCTGTACGCGGAGATGGACGCGCTCAGCGAGCTGGAGGCGTCGGAGCGGCGGATGGAGCAGTGGATGAGGCATAGCGGGCCGATCCCGGCGCAGCCGGGGCCATCGGCCAAGAGGCAGGTCCCCGAACCTGGCGAGAAGCTGATACGCGAGCTCAACTCGCAGCGGCAGAAGGTGCGCCGACTCATGGAGAGCTCGCTCTGGAGTGTCGCCGCGCACAAGGTATCCAAGCTCATGGCCAAGTCGGTGCTCGCCGTGCTCGCGCGCATCTCAATAACATTCGGTGCGTACGTGCCGGGCTTGCCGCTTTTGACAGTAGGTCGCGCGTGGGCGCTCCGCCGCACGTCTGGCCCCTTACAGCAGGCGGCGTCACCGGCCGCGGCGATCCGGCACTCGGCTCCCATCTTTCGGCAGAAAGACACCGCCTTTTCAGCGTCGGAGTCCATCAAGCCCCCGGCGAGCACGGTTGGCGGCTCGGGGATGGAGCTGCGATACGCGAACATGATCGTGTGCGCCGAGATGCTGCTCAGGCAACTTTGGCCAACGATCCACAGCAACGAGGTGGACGCCGGGATGGATCTCTCGAAGAGAGACGAGCTGTACAAGATGCTGCCTGTGACCATCCGCACGGCCGTGAAGGCGAAGCTGAGAGAGAGCTGGAGAGGGCAGCCAGTGGACGAGGCTGCGGCGGCGGCGTCGATGGACGCGGTGGACAGGATGCTGCGGTGGTTGGGGCCTATGGCGCACGACACGGTGCGGTGGCACGACGAGCATAGCATGGAGCGGGCGCAGCGGTTCAGCATGCGGCCGCGCGTGCTGATGGTGCAGACGCTGCACTTCGCCGACCGGCACAAGGCAGAGAATGTCATCGTCGAGGTGCTCATCGGGCTCAGCTGCGTTTGCTGGTACGACGATGAGCGACGCCGTCCGGCCGATTGGGACGACGACGACTAGACTGTTGGGTCTGGCGCTCTACTGCCCGGTATATTGGCATGGTATATAAGCATAAAGCATTTGTATCCACCATTATGGATACACCGCAGGACAATTTTTTTTGTTATGATTTGAAGAGTGACACTGTGTGCTAGCTAGCTAAATGTTCTTGCATCCCAGCGAGAAAAAACAATATGATACCACTGTAAATACGTGGTAATGTACATATGTTTATTCAAGGGTAGGACATGTCTATTGAAAATCATGTAAGTATGAATTTGTGACGCATTGGATTCATGGAATTGTCTAGATTACTCTAAAAAAAAGA] [+] EMBL CB640787 [ CTTGGATACCGTCCGGTCGCGTGCTG GTTCTGCTCCTTCGCTGTTTAGACGCGTAATCCGCATGAACAATCCTGTCTCGATTTCATACTGATGATATTTGATCTGCTGCGCGGCTGCTCGTTACGTTGGGTGTTATTTGATAGTATTTCCTTGTGTTCTTGAGCTTGGTAAGTAAAGTGGTGCCGTGTCGGGTGTGAGGTTTTGGCATGCCCGCGGGGGCGAGGTCATGGCTCGCCGACCTGCGCGCGCGGTTCGGTGGCGGCGCCAGGGAGGAGGCGGGTCTCGGGATCCTGGCGTTCGAGGCGGCGGCGGCCATGTCGCGGC TCGTGTCGCTCCACCGCTCGCTGTCTGACGTGGAGGTCAGGAGGCTCCGCGCGGACGCGCTGCGCGCCGAGGGCGTCGCGCGCGTCACGTCCACGGACCAGTCGCTCCTGCTCCGGCTCGCGTGCGGCGAGTTCGTGGCGGACCTCGACCATGC ] [+] EMBL OSS11586A [tagatcgcaACCGTCCGGNNG G NCTGNGTTCTGCTCCTTCGCTGTTTAGACGCGTAATCCGCATGAACAATCCTGTCTCGATTTCATACTGATGATATTTGATCTGCTGCGCGGCTGCTCGTTACGTTGGGTGTTATTTGATAGTATTTCCTTGTGTTCTTGAGCTTGGTAAGTAAAGTGGTGCCGTGTCGGGTGTGAGGTTTTGGCATACCCCCGGGGGCGAGGTCATGGCTCGCGGACCTTCGCGCNNGNTTCGGTGGCGGCGCAAGGGAGGAGGCGGG CTCGGGATCCTGGCG TCGAGGCGGCGGCGG CATGTCGGGGCTTCGTGTCGTTCC ] [+] EMBL CB663485 [ TG GTTCTGCTCCTTCGCTGTTTAGACGCGTAATCCGCATGAACAATCCTGTCTCGATTTCATACTGATGATATTTGATCTGCTGCGCGGCTGCTCGTTACGTTGGGTGTTATTTGATAGTATTTCCTTGTGTTCTTGAGCTTGGTAAGTAAAGTGGTGCCGTGTCGGGTGTGAGGTTTTGGCATGCCCGCGGGGGCGAGGTCATGGCTCGCCGACCTGCGCGCGCGGTTCGGTGGCGGCGCCAGGGAGGAGGCGGGTCTCGGGATCCTGGCGTTCGAGGCGGCGGCGGCCATGTCGCGGC TCGTGTCGCTCCACCGCTCGCTGTCTGACGTGGAGGTCAGGAGGCTCCGCGCGGACGCGCTGCGCGCCGAGGGCGTCGCGCGCGTCACGTCCACGGACCAGTCGCTCCTGCTCCGGCTCGCGTGCGGCGAGTTCGTGGCGGACCTCGACCATGCCGCCGGCACTGCCGCGCGCCTCGGGGCGCGGTGCTGCGCGGGCGCGCCGTTCCTGCACGATTTCGACCGCGTCTACGCCGAGGCGAAGCGCGGGAACGGCCTCGCGCGGCTGGACGCGACGGTTGGGTTCTACAGGGGCGCGGCGAAGCGGTTCAGGAAGATGGAGCGGCACGTGGCTGCGACGGCGAAGCTGTACGCGGAGATGGACGCGCTCAGCGAGCTGGAGGCGTCGGAGCGG ] [+] EMBL CB645813 [ CGTGCCTCTCCACCGCTCGCTGTCTGACGTGGAGGTCAGGAGGCTCCGCGCGGACGCGCTGCGCGCCGAGGGCGTCGCGCGCGTCACGTCCACGGACCAGTCGCTCCTGCTCCGGCTCGCGTGCGGCGAGTTCGTGGCGGACCTCGACCATGCCGCCGGCACTGCCGCGCGCCTCGGGGCGCGGTGCTGCGCGGGCGCGCCGTTCCTGCACGATTTCGACCGCGTCTACGCCGAGGCGAAGCGCGGGAACGGCCTCGCGCGGCTGGACGCGACGGTTGGGTTCTACAGGGGCGCGGCGAAGCGGTTCAGGAAGATGGAGCGGCACGTGGCTGCGACGGCGAAGCTGTACGCGGAGATGGACGCGCTCAGCGAGCTGGAGGCGTCGGAGCGGCGGATGGAGCAGTGGATGAGGCATAGCGGGCCGATCCCGGCGCAGCCGGGGCCATCGGCCAAGAGGCAGGTCCCCGAACCTGGCGAGAAGCTGATACGCGAGCTCAACTCGCAGCGGCAGAAGGTGCGCCGACTCATGGAGAGCTCGCTCTGGAGTGTCGCCGCGCACAAGGTATCCAAGCTCATGGCCAAGTCGGTGCTCGCCGTGCTCGCGCGCATCTCAATAACATTCGGTGCGTACGTGCCGGGCTTGCCGCTTTTGACAGTAGGTCGCGCGTGGGCGCTCCGCCGCACGTCTGGCCCCTTACAGCAGGCGGCGTCACCGGCCGCGGCGATCCGGCACTCGGCTCCCATCTTTCGGCAGAAAGACA ] [+] EMBL AK108185 [ GCCATCGGCCAAGAGGCAGGTCCCCGAACCTGGCGAGAAGCTGATACGCGAGCTCAACTCGCAGCGGCAGAAGGTGCGCCGACTCATGGAGAGCTCGCTCTGGAGTGTCGCCGCGCACAAGGTATCCAAGCTCATGGCCAAGTCGGTGCTCGCCGTGCTCGCGCGCATCTCAATAACATTCGGTGCGTACGTGCCGGGCTTGCCGCTTTTGACAGTAGGTCGCGCGTGGGCGCTCCGCCGCACGTCTGGCCCCTTACAGCAGGCGGCGTCACCGGCCGCGGCGATCCGGCACTCGGCTCCCATCTTTCGGCAGAAAGACACCGCCTTTTCAGCGTCGGAGTCCATCAAGCCCCCGGCGAGCACGGTTGGCGGCTCGGGGATGGAGCTGCGATACGCGAACATGATCGTGTGCGCCGAGATGCTGCTCAGGCAACTTTGGCCAACGATCCACAGCAACGAGGTGGATGCCGGGATGGATCTCTCGAAGAGAGACGAGCTGTACAAGATGCTGCCTGTGACCATCCGCACGGCCGTGAAGGCGAAGCTGAGAGAGAGCTGGAGAGGGCAGCCAGTGGACGAGGCTGCGGCGGCGGCGTCGATGGACGCGGTGGACAGGATGCTGCGGTGGTTGGGGCCTATGGCGCACGACACGGTGCGGTGGCACGACGAGCATAGCATGGAGCGGGCGCAGCGGTTCAGCATGCGGCCGCGCGTGCTGATGGTGCAGACGCTGCACTTCGCCGACCGGCACAAGGCAGAGAATGTCATCGTCGAGGTGCTCATCGGGCTCAGCTGCGTTTGCTGGTACGACGATGAGCGACGCCGTCCGGCCGATTGGGACGACGACGACTAGACTGTTGGGTCTGGCGCTCTACTGCCCGGTATATTGGCATGGTATATAAGCATAAAGCATTTGTATCCACCATTATGGATACACCGCAGGACAATTTTTTTTGTTATGATTTGAAGAGTGACACTGTGTGCTAGCTAGCTAAAAGTTCTTGCATCCCAGCGAGAAAAAACAATATGATACCACTGTAAATACGTGGTAATGTACATATGTTTATTCAAGGGTAGGACATGTCTATTGAAAATCATGTAAGTATGAATTTGTGAC ] [-] EMBL CB645814 [ CCCCCGGCGAGCACGGTTGGCGGCTCGGGGATGGAGCTGCGATACGCGAACATGATCGTGTGCGCCGAGATGCTGCTCAGGCAACTTTGGCCAACGATCCACAGCAACGAGGTGGACGCCGGGATGGATCTCTCGAAGAGAGACGAGCTGTACAAGATGCTGCCTGTGACCATCCGCACGGCCGTGAAGGCGAAGCTGAGAGAGAGCTGGAGAGGGCAGCCAGTGGACGAGGCTGCGGCGGCGGCGTCGATGGACGCGGTGGACAGGATGCTGCGGTGGTTGGGGCCTATGGCGCACGACACGGTGCGGTGGCACGACGAGCATAGCATGGAGCGGGCGCAGCGGTTCAGCATGCGGCCGCGCGTGCTGATGGTGCAGACGCTGCACTTCGCCGACCGGCACAAGGCAGAGAATGTCATCGTCGAGGTGCTCATCGGGCTCAGCTGCGTTTGCTGGTACGACGATGAGCGACGCCGTCCGGCCGATTGGGACGACGACGACTAGACTGTTGGGTCTGGCGCTCTACTGCCCGGTATATTGGCATGGTATATAAGCATAAAGCATTTGTATCCACCATTATGGATACACCGCAGGACAATTTTTTTTGTTATGATTTGAAGAGTGACACTGTGTGCTAGCTAGCTAAATGTTCTTGCATCCCAGCGAGAAAAAACAATATGATACCACTGTAAATACGTGGTAATGTACATATGTTTATTCAAGGGTAGGACATGTCTATTGAAAATCATGTAAGTATGAATTTGTGGCGCATTGGATTCATGGAATTGTCTAGATTACTCTAAAAAAAAGA] [-] EMBL CB663486 [ TGGCCAACGATCCACAGCAACGAGGTGGACGCCGGGATGGATCTCTCGAAGAGAGACGAGCTGTACAAGATGCTGCCTGTGACCATCCGCACGGCCGTGAAGGCGAAGCTGAGAGAGAGCTGGAGAGGGCAGCCAGTGGACGAGGCTGCGGCGGCGGCGTCGATGGACGCGGTGGACAGGATGCTGCGGTGGTTGGGGCCTATGGCGCACGACACGGTGCGGTGGCACGACGAGCATAGCATGGAGCGGGCGCAGCGGTTCAGCATGCGGCCGCGCGTGCTGATGGTGCAGACGCTGCACTTCGCCGACCGGCACAAGGCAGAGAATGTCATCGTCGAGGTGCTCATCGGGCTCAGCTGCGTTTGCTGGTACGACGATGAGCGACGCCGTCCGGCCGATTGGGACGACGACGACTAGACTGTTGGGTCTGGCGCTCTACTGCCCGGTATATTGGCATGGTATATAAGCATAAAGCATTTGTATCCCCCATTATGGATACCCCGCAGGACAATTTTTTTTGTTATGATTTGAAGAGTGACACTGTGTGCTAGCTAGCTAAATGTTCTTGCATCCCAGCGAGAAAAAACAATATGATACCCCTGTAAATACGTGGTAATGTACATATGTTTATTCAAGGGTAGGACATGTCTATTGAAAATCATGTAAGTATGAATTTGTGAC CATTGGATTCATGGAATTGTCTAGATTACTCTAtat ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||