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Oryza sativa
cluster # 9936 cluster # 9936       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9936#0 length = 1091 sequences # 2  
consensus_9936#1 length = 851 sequences # 1  
consensus_9936#2 length = 700 sequences # 1  
consensus_9936#3 length = 513 sequences # 3  

consensusID : consensus_9936#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1091
fasta sequence
                              [GCTCTCCATTATTTTCGGATCTAGCCCTCGCGTACACCGTAGTTAGCCAAGCCGCTCCGCCTCGTTTCCATCGCCGCCACCACCGCCTCCCCGTCCGCCTGCCGCCGCCGCCGTGTGGGAGGGGATGCCAGACTTGGGAGGTGACGGCGACGAAGTAGAGAAGGCGCCCACCCTCTCCCCTGCGGCTGTGGCTTGTGCTCGGGGATGGATGCGGCGACGGGCGACGGCGACGGACTGCGGCAATGGCGAGCGACGGGCTCGGCAGGGCTGTCCCCCGCTCGAATCCGGTGACGACGGTCGTCCTCCGCCCGGATCCAGTGGTGGCGGGCGTCCCTCGCCTGACCTCGGACGGATCCACCGGCGGCGGTGGGAGGAAAGCAGCGTGCGGCAGGCCACCTTGCAGTCCTCTCCTCCTCTTCCTCCTCCCGCTTCTTCCTGCCCGCTGCCGTCATCATGGTTGTCCTCCACCAGCTCTCCGCGTGGCCGCCGCCGTCCGCCGATGGACGTCGACTCTGACCTGGCCGACAAGGGCAAGCCCACCCAGATGGACCTCGAGGACCAGACTACAGGAATGCTCTGAATTTGTGGAGTTTTCTGCACCTCAGCTGACGATCATGGGGGAGGCTGCAACCCCAGCGAGGCAGGAGGATGTTTTCCAGGTGGCGGGTCACGCCTCGTCGATAGCATAGATCACACATGGGCAGAGGAAGCTGTGGATAGCATGATGGGTCTGCTAGCTGCAAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTGCTTTTGCCTGCCATGGTAAGGCCAGCAAGATGGGATGAGGCTTCAGCTGGCTAGTGGGGATGGAGATGAAATCAGAAATCAGGATTTACTGTCTTTTGTAGTTAATAATCAGCGTCGTCGGCCCTGATCTACATTTGCTATATTAGTGCTGGCATCGATCGGTATCGGCATATGTATTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGTTTTGTGTTTTTCTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGACACTGGATCAAACAATTCATGTTTGTAAAGAAATTATTAAATTG]

[+] EMBL AK058877             [GCTCTCCATTATTTTCGGATCTAGCCCTCGCGTACACCGTAGTTAGCCAAGCCGCTCCGCCTCGTTTCCATCGCCGCCACCACCGCCTCCCCGTCCGCCTGCCGCCGCCGCCGTGTGGGAGGGGATGCCAGACTTGGGAGGTGACGGCGACGAAGTAGAGAAGGCGCCCACCCTCTCCCCTGCGGCTGTGGCTTGTGCTCGGGGATGGATGCGGCGACGGGCGACGGCGACGGACTGCGGCAATGGCGAGCGACGGGCTCGGCAGGGCTGTCCCCCGCTCGAATCCGGTGACGACGGTCGTCCTCCGCCCGGATCCAGTGGTGGCGGGCGTCCCTCGCCTGACCTCGGACGGATCCACCGGCGGCGGTGGGAGGAAAGCAGCGTGCGGCAGGCCACCTTGCAGTCCTCTCCTCCTCTTCCTCCTCCCGCTTCTTCCTGCCCGCTGCCGTCATCATGGTTGTCCTCCACCAGCTCTCCGCGTGGCCGCCGCCGTCCGCCGATGGACGTCGACTCTGACCTGGCCGACAAGGGCAAGCCCACCCAGATGGACCTCGAGGACCAGACTACAGGAATGCTCTGAATTTGTGGAGTTTTCTGCACCTCAGCTGACGATCATGGGGGAGGCTGCAACCCCAGCGAGGCAGGAGGATGTTTTCCAGGTGGCGGGTCACGCCTCGTCGATAGCATAGATCACACATGGGCAGAGGAAGCTGTGGATAGCATGATGGGTCTGCTAGCTGCAAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTGCTTTTGCCTGCCATGGTAAGGCCAGCAAGATGGGATGAGGCTTCAGCTGGCTAGTGGGGATGGAGATGAAATCAGAAATCAGGATTTACTGTCTTTTGTAGTTAATAATCAGCGTCGTCGGCCCTGATCTACATTTGCTATATTAGTGCTGGCATCGATCGGTATCGGCATATGTATTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGTTTTGTGTTTTTCTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGACACTGGATCAAACAATTCATGTTTGTAAAGAAATTATTAAATTG]
[+] EMBL C27184               [    TCCATTATTTNCGGNTCTAGCCCTCCCGTACACCGCAGTTAGCCAAGCCGCTCCGCCTCGTTTCCATCGCCGCCACCACCGCCTCCCCGTCCGCNTGCCGCCGCCGCCGTGTGGGAGGGGATACCAGACTTGGGAGGTGACGGCGACGAAGCAGAGAAGGCGCCCACCCTCTCCCCTGCGGCTGTGGCTTGTGCTCGGGGATGGATGCGGCGACGGGCGACGGCGACGCACTGCGGCAATGGCGAGCAACGGGCTCGGCGGGGCTGTCCCCCGCTCGAATCCGGTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_9936#0 GCTCTCCATTATTTTCGGATCTAGCCCTCGCGTACACCGTAGTTAGCCAAGCCGCTCCGC CTCGTTTCCATCGCCGCCACCACCGCCTCCCCGTCCGCCTGCCGCCGCCGCCGTGTGGGA GGGGATGCCAGACTTGGGAGGTGACGGCGACGAAGTAGAGAAGGCGCCCACCCTCTCCCC TGCGGCTGTGGCTTGTGCTCGGGGATGGATGCGGCGACGGGCGACGGCGACGGACTGCGG CAATGGCGAGCGACGGGCTCGGCAGGGCTGTCCCCCGCTCGAATCCGGTGACGACGGTCG TCCTCCGCCCGGATCCAGTGGTGGCGGGCGTCCCTCGCCTGACCTCGGACGGATCCACCG GCGGCGGTGGGAGGAAAGCAGCGTGCGGCAGGCCACCTTGCAGTCCTCTCCTCCTCTTCC TCCTCCCGCTTCTTCCTGCCCGCTGCCGTCATCATGGTTGTCCTCCACCAGCTCTCCGCG TGGCCGCCGCCGTCCGCCGATGGACGTCGACTCTGACCTGGCCGACAAGGGCAAGCCCAC CCAGATGGACCTCGAGGACCAGACTACAGGAATGCTCTGAATTTGTGGAGTTTTCTGCAC CTCAGCTGACGATCATGGGGGAGGCTGCAACCCCAGCGAGGCAGGAGGATGTTTTCCAGG TGGCGGGTCACGCCTCGTCGATAGCATAGATCACACATGGGCAGAGGAAGCTGTGGATAG CATGATGGGTCTGCTAGCTGCAAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTGCTTTT GCCTGCCATGGTAAGGCCAGCAAGATGGGATGAGGCTTCAGCTGGCTAGTGGGGATGGAG ATGAAATCAGAAATCAGGATTTACTGTCTTTTGTAGTTAATAATCAGCGTCGTCGGCCCT GATCTACATTTGCTATATTAGTGCTGGCATCGATCGGTATCGGCATATGTATTAGCGGGT GGTGTTGATTTGATTTTGTTTATTAGTTTTGTGTTTTTCTGCCGATGTATCATTGCGTGC ATTATCAGATTGTTGATGTAACACCGACACTGGATCAAACAATTCATGTTTGTAAAGAAA TTATTAAATTG



consensusID : consensus_9936#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 851
fasta sequence
                              [TCAGGTTCTCTGATATTTTTTATAAATGAAAACTCTAGAAGCTTGATTCAATAGCAGTTCACTGAAATTTTGTGGTTCAACAGAGCATATCAATTGATTTTCTCTGAACTGCTCTCTACATATGATCCTTTTGATCATAGTTTTTCGCTGAATATTTTGGTTGAACAAAGCAGTTGTAGTCCCCTATGAGCTTTTTTCTGCTGTAGATGTAGTTCATGTTCTGATTTTTTTTTTGTTGATGAACAGATTTCTCAATTTTGGTCTACTTGATTTTTCATCCATAGACTACAGGAATGCTCTGAATTTGTGGAGTTTTCTGCACCTCAGCTGACGATCATGGGGGAGGCTGCAACCCCAGCGAGGCAGGAGGATGTTTTCCAGGTGGCGGGTCACGCCTCGTCGATAGCATAGATCACACATGGGCAGAGGAAGCTGTGGATAGCATGATGGGTCTGCTAGCTGCAAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTGCTTTTGCCTGCCATGGTAAGGCCAGCAAGATGGGATGAGGCTTCAGCTGGCTAGTGGGGATGGAGATGAAATCAGAAATCAGGATTTACTGTCTTTTGTAGTTAATAATCAGCGTCGTCGGCCCTGATCTACATTTGCTATATTAGTGCTGGCATCGATCGGTATCGGCATATGTATTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGTTTTGTGTTTTTCTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGACACTGGATCAAACAATTCATGTTTGTAAAGAAATTATTAAATTGTGGTTAGGTTAATAATATGAATCATAATCTTTTACCTT]

[-] EMBL CB665493             [TCAGGTTCTCTGATATTTTTTATAAATGAAAACTCTAGAAGCTTGATTCAATAGCAGTTCACTGAAATTTTGTGGTTCAACAGAGCATATCAATTGATTTTCTCTGAACTGCTCTCTACATATGATCCTTTTGATCATAGTTTTTCGCTGAATATTTTGGTTGAACAAAGCAGTTGTAGTCCCCTATGAGCTTTTTTCTGCTGTAGATGTAGTTCATGTTCTGATTTTTTTTTTGTTGATGAACAGATTTCTCAATTTTGGTCTACTTGATTTTTCATCCATAGACTACAGGAATGCTCTGAATTTGTGGAGTTTTCTGCACCTCAGCTGACGATCATGGGGGAGGCTGCAACCCCAGCGAGGCAGGAGGATGTTTTCCAGGTGGCGGGTCACGCCTCGTCGATAGCATAGATCACACATGGGCAGAGGAAGCTGTGGATAGCATGATGGGTCTGCTAGCTGCAAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTGCTTTTGCCTGCCATGGTAAGGCCAGCAAGATGGGATGAGGCTTCAGCTGGCTAGTGGGGATGGAGATGAAATCAGAAATCAGGATTTACTGTCTTTTGTAGTTAATAATCAGCGTCGTCGGCCCTGATCTACATTTGCTATATTAGTGCTGGCATCGATCGGTATCGGCATATGTATTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGTTTTGTGTTTTTCTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGACACTGGATCAAACAATTCATGTTTGTAAAGAAATTATTAAATTGTGGTTAGGTTAATAATATGAATCATAATCTTTTACCTT]


>consensus_9936#1 TCAGGTTCTCTGATATTTTTTATAAATGAAAACTCTAGAAGCTTGATTCAATAGCAGTTC ACTGAAATTTTGTGGTTCAACAGAGCATATCAATTGATTTTCTCTGAACTGCTCTCTACA TATGATCCTTTTGATCATAGTTTTTCGCTGAATATTTTGGTTGAACAAAGCAGTTGTAGT CCCCTATGAGCTTTTTTCTGCTGTAGATGTAGTTCATGTTCTGATTTTTTTTTTGTTGAT GAACAGATTTCTCAATTTTGGTCTACTTGATTTTTCATCCATAGACTACAGGAATGCTCT GAATTTGTGGAGTTTTCTGCACCTCAGCTGACGATCATGGGGGAGGCTGCAACCCCAGCG AGGCAGGAGGATGTTTTCCAGGTGGCGGGTCACGCCTCGTCGATAGCATAGATCACACAT GGGCAGAGGAAGCTGTGGATAGCATGATGGGTCTGCTAGCTGCAAGTTCATTGGGTGGAG CTTTCTCTTGGGGGGTGCTTTTGCCTGCCATGGTAAGGCCAGCAAGATGGGATGAGGCTT CAGCTGGCTAGTGGGGATGGAGATGAAATCAGAAATCAGGATTTACTGTCTTTTGTAGTT AATAATCAGCGTCGTCGGCCCTGATCTACATTTGCTATATTAGTGCTGGCATCGATCGGT ATCGGCATATGTATTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGTTTTGTGTTTTT CTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGACACTGGATCAA ACAATTCATGTTTGTAAAGAAATTATTAAATTGTGGTTAGGTTAATAATATGAATCATAA TCTTTTACCTT



consensusID : consensus_9936#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 700
fasta sequence
                              [GCCGCCTTCGCCGTGTGGGAGGGGATGCCAGACTTGGGAGGTGACGGCGACGAAGTAGAGAAGGCGCCCACCCTCTCCCCTGCGGCTGTGGCTTGTGCTCGGGGATGGATGCGGCGACGGGCGACGGCGACGGACTGCGGCAATGGCGAGCGACGGGCTCGGCAGGGCTGTCCCCCGCTCGAATCCGGTGACGACGGTCGTCCTCCGCCCGGATCCAGTGGTGGCGGGCGTCCCTCGCCTGACCTCGGACGGATCCACCGGCGGCGGTGGGAGGAAAGCAGCGTGCGGCAGGCCACCTTGCAGTCCTCTCCTCCTCTTCCTCCTCCCGCTTCTTCCTGCCCGCTGCCGTCATCATGGTTGTCCTCCACCAGCTCTCCGCGTGGCCGCCGCCGTCCGCCGATGGACGTCGACTCTGACCTGGCCGACAAGGGCAAGCCCACCCAGATGGACCTCTAGGACCAGGTACGCCGAAGCCGCTCGACTCGTCCCCACAGGAATTCTTCTTTCAGTTTTTTATTGTGACTGCCTAAGCTTGGAGAGCATCTCAATTTCCGTTGAAACACTTCAGGGAAGCATTTAGCTCTGAGATTTCATGAGACTTCCATCTATTATCCTACCAAACTTCTGGCTGGTTCGTTAGTTCTATGTGATCTGGATTTGGTTTGTGTAACACTAACATCCATTGATATTCTGAGTTTTT]

[+] EMBL CB665492             [GCCGCCTTCGCCGTGTGGGAGGGGATGCCAGACTTGGGAGGTGACGGCGACGAAGTAGAGAAGGCGCCCACCCTCTCCCCTGCGGCTGTGGCTTGTGCTCGGGGATGGATGCGGCGACGGGCGACGGCGACGGACTGCGGCAATGGCGAGCGACGGGCTCGGCAGGGCTGTCCCCCGCTCGAATCCGGTGACGACGGTCGTCCTCCGCCCGGATCCAGTGGTGGCGGGCGTCCCTCGCCTGACCTCGGACGGATCCACCGGCGGCGGTGGGAGGAAAGCAGCGTGCGGCAGGCCACCTTGCAGTCCTCTCCTCCTCTTCCTCCTCCCGCTTCTTCCTGCCCGCTGCCGTCATCATGGTTGTCCTCCACCAGCTCTCCGCGTGGCCGCCGCCGTCCGCCGATGGACGTCGACTCTGACCTGGCCGACAAGGGCAAGCCCACCCAGATGGACCTCTAGGACCAGGTACGCCGAAGCCGCTCGACTCGTCCCCACAGGAATTCTTCTTTCAGTTTTTTATTGTGACTGCCTAAGCTTGGAGAGCATCTCAATTTCCGTTGAAACACTTCAGGGAAGCATTTAGCTCTGAGATTTCATGAGACTTCCATCTATTATCCTACCAAACTTCTGGCTGGTTCGTTAGTTCTATGTGATCTGGATTTGGTTTGTGTAACACTAACATCCATTGATATTCTGAGTTTTT]


>consensus_9936#2 GCCGCCTTCGCCGTGTGGGAGGGGATGCCAGACTTGGGAGGTGACGGCGACGAAGTAGAG AAGGCGCCCACCCTCTCCCCTGCGGCTGTGGCTTGTGCTCGGGGATGGATGCGGCGACGG GCGACGGCGACGGACTGCGGCAATGGCGAGCGACGGGCTCGGCAGGGCTGTCCCCCGCTC GAATCCGGTGACGACGGTCGTCCTCCGCCCGGATCCAGTGGTGGCGGGCGTCCCTCGCCT GACCTCGGACGGATCCACCGGCGGCGGTGGGAGGAAAGCAGCGTGCGGCAGGCCACCTTG CAGTCCTCTCCTCCTCTTCCTCCTCCCGCTTCTTCCTGCCCGCTGCCGTCATCATGGTTG TCCTCCACCAGCTCTCCGCGTGGCCGCCGCCGTCCGCCGATGGACGTCGACTCTGACCTG GCCGACAAGGGCAAGCCCACCCAGATGGACCTCTAGGACCAGGTACGCCGAAGCCGCTCG ACTCGTCCCCACAGGAATTCTTCTTTCAGTTTTTTATTGTGACTGCCTAAGCTTGGAGAG CATCTCAATTTCCGTTGAAACACTTCAGGGAAGCATTTAGCTCTGAGATTTCATGAGACT TCCATCTATTATCCTACCAAACTTCTGGCTGGTTCGTTAGTTCTATGTGATCTGGATTTG GTTTGTGTAACACTAACATCCATTGATATTCTGAGTTTTT



consensusID : consensus_9936#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 513
fasta sequence
                              [GGGGAGGCTNCAACTCCAGAGAGGCAGGAGGATGTTGTCCAGGTGGCGGNTCACGCNTCGTCGACAGCATAGATCACACATGGGCAGAGGAAGCTGTGGATAGCATGATGGGTCTGCTAGCTGCAAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTGCTTTTGCCTGCCATGGCAAGGCCAGCAAGATGGGATGAGGCTTCAGCTGGCTAGTGAGGATGGAGATGAAATCAGAAATTTACTACCTGTGAGCTGAACTCAGGATTTACTGCCTTTTGTAGTTAATAATCAGCGTCGTCGGCCCTGATCTACGTTGCTATATTAGTGCTGGCATCGATCGGTATTGGCATATGTATTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGCTTTGTGTTTTTCTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGACACTGGATCAAACAATTCATGTTTGTAAAGAAATTATTAAATTGTGGTTAGGTTAAAAAAAAA]

[+] EMBL AU100799             [GGGGAGGCTNCAACTCCAGAGAGGCAGGAGGATGTTGTCCAGGTGGCGGNTCACGCNTCGTCGACAGCATAGATCACACATGGGCAGAGGAAGCTGTGGATAGCATGATGGGTCTGCTAGCTGCAAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTGCTTTTGCCTGCCATGGCAAGGCCAGCAAGATGGGATGAGGCTTCAGCTGGCTAGTGAGGATGGAGATGAAATCAGAAATTTACTACCTGTGAGCTGAACTCAGGATTTACTGCCTTTTGTAGTTAATAATCAGCGTCGTCGGCCCTGATCTACGTTGCTATATTAGTGCTGGCATCGATCGGTATTGGCATATGTATTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGTTTTGTGTTTTTCTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGACACTGGATCAAACAATTCATGTTTGTAAAAAAA                              ]
[+] EMBL CF331327             [                                                                                                                                                                                                                                                CTACCTGTGAGCTGAACTCAGGATTTACTGCCTTTTGTAGTTAATAATCAGCGTCGTCGGCCCTGATCTACGTTGCTATATTAGTGCTGGCATCGATCGGTATTGGCATATGT TTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGCTTTGTGTTTTTCTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGACACTGGATCAAACAATTCATGTTTGTAAAGAAATTATTAAATTGTGGTTAGGTTAAAAAAAA ]
[-] EMBL CF331328             [                                                                                                                                                                                                                                                 TACCTGTGAGCTGAACTCAGGATTTACTGCCTTTTGTAGTTAATAATCAGCGTCGTCGGCCCTGATCTACGTTGCTATATTAGTGCTGGCATCGATCGGTATTGGCATATGTATTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGCTTTGTGTTTTTCTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGACACTGGATCAAACAATTCATGTTTGTAAAGAAATTATTAAATTGTGGTTAGGTTAAAAAAAAA]


>consensus_9936#3 GGGGAGGCTNCAACTCCAGAGAGGCAGGAGGATGTTGTCCAGGTGGCGGNTCACGCNTCG TCGACAGCATAGATCACACATGGGCAGAGGAAGCTGTGGATAGCATGATGGGTCTGCTAG CTGCAAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTGCTTTTGCCTGCCATGGCAAGGC CAGCAAGATGGGATGAGGCTTCAGCTGGCTAGTGAGGATGGAGATGAAATCAGAAATTTA CTACCTGTGAGCTGAACTCAGGATTTACTGCCTTTTGTAGTTAATAATCAGCGTCGTCGG CCCTGATCTACGTTGCTATATTAGTGCTGGCATCGATCGGTATTGGCATATGTATTAGCG GGTGGTGTTGATTTGATTTTGTTTATTAGCTTTGTGTTTTTCTGCCGATGTATCATTGCG TGCATTATCAGATTGTTGATGTAACACCGACACTGGATCAAACAATTCATGTTTGTAAAG AAATTATTAAATTGTGGTTAGGTTAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9936#1      ------------------------------------------------------------
consensus_9936#3      ------------------------------------------------------------
consensus_9936#0      GCTCTCCATTATTTTCGGATCTAGCCCTCGCGTACACCGTAGTTAGCCAAGCCGCTCCGC 60
consensus_9936#2      ------------------------------------------------------------
                                                                                  

consensus_9936#1      ------------------------------------------------------------
consensus_9936#3      ------------------------------------------------------------
consensus_9936#0      CTCGTTTCCATCGCCGCCACCACCGCCTCCCCGTCCGCCTGCCGCCGCCGCCGTGTGGGA 120
consensus_9936#2      ------------------------------------------------------------
                                                                                  

consensus_9936#1      ------------------------------------------------------------
consensus_9936#3      ------------------------------------------------------------
consensus_9936#0      GGGGATGCCAGACTTGGGAGGTGACGGCGACGAAGTAGAGAAGGCGCCCACCCTCTCCCC 180
consensus_9936#2      ------------------------------------------------------------
                                                                                  

consensus_9936#1      ------------------------------------------------------------
consensus_9936#3      ------------------------------------------------------------
consensus_9936#0      TGCGGCTGTGGCTTGTGCTCGGGGATGGATGCGGCGACGGGCGACGGCGACGGACTGCGG 240
consensus_9936#2      ------------------------------------------------------------
                                                                                  

consensus_9936#1      --------------------------------------TCAGGTTCTCTGATATTTTTTA 22
consensus_9936#3      ------------------------------------------------------------
consensus_9936#0      CAATGGCGAGCGACGGGCTCGGCAGGGCTGTCCCCCGCTCGAATCCGGTGACGACGGTCG 300
consensus_9936#2      ------------------------------------------------------------
                                                                                  

consensus_9936#1      TAAATGAAAACTCTAGAAGCTTGATTCAATAGCAGTTCACTGAAATTTTGTGGTTCAACA 82
consensus_9936#3      ------------------------------------------------------------
consensus_9936#0      TCCTCCGCCCGGATCCAGTGGTGGCG-GGCGTCCCTCGCCTGACCTCGGACGGATCCACC 359
consensus_9936#2      ------------------------------------------------------------
                                                                                  

consensus_9936#1      GAGCATATCAATTGATTTTCTCTGAACTGCTCTCTACAT-ATGATCCTTTTGATCATAGT 141
consensus_9936#3      ------------------------------------------------------------
consensus_9936#0      GGCGGCGGTGGGAGGAAAGCAGCGTGCGGCAGGCCACCTTGCAGTCCTCTCCTCCTCTTC 419
consensus_9936#2      ------------------------------------------------------------
                                                                                  

consensus_9936#1      TTTTCGCTGAATATTTTGGTTGAACAAAGCAGTTGTAGTCCCCTATGAGCTTTTTTCTGC 201
consensus_9936#3      ------------------------------------------------------------
consensus_9936#0      CTCCTCCCGCTTCTTCCTGCCCGCTGCCGTCATCATGGTTGTCCTCCACCAGCTCTCCGC 479
consensus_9936#2      ---------GCCGCCTTCGCCGTGTGGGAGGGGATGCCAGACTTGGGAGGTGACGGCGAC 51
                                                                                  

consensus_9936#1      T--GTAGATGTAGTTCATGTTCTGATTTTTTTTTTGTTGATGAACAGATTTCTCAATTTT 259
consensus_9936#3      ------------------------------------------------------------
consensus_9936#0      GTGGCCGCCGCCGTCCGCCGATGGACGTCGACTCTG--ACCTGGCCGACAAGGGCAAGCC 537
consensus_9936#2      GAAGTAGAGAAGGCGCCCACCC---TCTCCCCTGCGGCTGTGGCTTGTGCTCGGGGATGG 108
                                                                                  

consensus_9936#1      GGTCTACTTGATTTTTCATCCATAGACTACAGGAATGCTCTGAATTTG--TGGAGTTTTC 317
consensus_9936#3      ------------------------------------------------------------
consensus_9936#0      CACCCAGATGGACCTCGAGGACCAGACTACAGGAATGCTCTGAATTTG--TGGAGTTTTC 595
consensus_9936#2      ATGCGGCGACGGGCGACGGCGACGGACTGCGGCAATGGCGAGCGACGGGCTCGGCAGGGC 168
                                                                                  

consensus_9936#1      TGCACCTCAGCTGACGATCATGGGGGAGGCTGCAACCCCAGCGAGGCAGGAGGATGTTTT 377
consensus_9936#3      ----------------------GGGGAGGCTNCAACTCCAGAGAGGCAGGAGGATGTTGT 38
consensus_9936#0      TGCACCTCAGCTGACGATCATGGGGGAGGCTGCAACCCCAGCGAGGCAGGAGGATGTTTT 655
consensus_9936#2      TGTCCCCCGCTCGAATCCGGTGACGACGGTCGTCCTCCGCCCGGATCCAGTGG------- 221
                                              *  **        *    *   *  * **       

consensus_9936#1      CCAGGTGGCGGGTCACGCCTCGTCGATAGCATAGATCACACATGGGCAGAGGAAGCTGTG 437
consensus_9936#3      CCAGGTGGCGGNTCACGCNTCGTCGACAGCATAGATCACACATGGGCAGAGGAAGCTGTG 98
consensus_9936#0      CCAGGTGGCGGGTCACGCCTCGTCGATAGCATAGATCACACATGGGCAGAGGAAGCTGTG 715
consensus_9936#2      -TGGCGGGCGTCCCTCGCCTGACC--TCGGACGGATCCACCGGCGGCGGTGGGAGGAAAG 278
                         *  ****   * *** *   *    * *  ****   *   *** * ** **    *

consensus_9936#1      GATAGCATGATGGGTCTGCTAGCTGCAAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTG 497
consensus_9936#3      GATAGCATGATGGGTCTGCTAGCTGCAAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTG 158
consensus_9936#0      GATAGCATGATGGGTCTGCTAGCTGCAAGTTCATTGGGTGGAGCTTTCTCTTGGGGGGTG 775
consensus_9936#2      CAGCGTGCGGCAGGCCACCTTGCAGTCCTCTCCTCCTCTTCCTCCTCCCGCTTCTTCCTG 338
                       *  *   *   ** *  ** ** *     ** *    *    * * *   *      **

consensus_9936#1      CTTTTGCCTGCCATGGTAA--GGCCAGCAAGATGGGATGAGGCTTCAGCTGGCTAGTGGG 555
consensus_9936#3      CTTTTGCCTGCCATGGCAA--GGCCAGCAAGATGGGATGAGGCTTCAGCTGGCTAGTGAG 216
consensus_9936#0      CTTTTGCCTGCCATGGTAA--GGCCAGCAAGATGGGATGAGGCTTCAGCTGGCTAGTGGG 833
consensus_9936#2      CCCGCTGCCGTCATCATGGTTGTCCTCCACCAGCTCTCCGCGTGGCCGCCGCCGTCCGCC 398
                      *      * * ***       * **  **  *         *   * ** * *    *  

consensus_9936#1      GATGGAGATGAAATCAGAAAT---------------------CAGGATTTACTGTCTTTT 594
consensus_9936#3      GATGGAGATGAAATCAGAAATTTACTACCTGTGAGCTGAACTCAGGATTTACTGCCTTTT 276
consensus_9936#0      GATGGAGATGAAATCAGAAAT---------------------CAGGATTTACTGTCTTTT 872
consensus_9936#2      GATGGACGTCGACTCTGACCTGGCCGAC--------------AAGGGCAAGCCCACCCAG 444
                      ******  *  * ** **  *                      ***     *   *    

consensus_9936#1      GTAG---TTAATAATCAGCGTCGTCGGCCCTGATCTACAT-TTGCTATATTAGTGCTGGC 650
consensus_9936#3      GTAG---TTAATAATCAGCGTCGTCGGCCCTGATCTACGT-T-GCTATATTAGTGCTGGC 331
consensus_9936#0      GTAG---TTAATAATCAGCGTCGTCGGCCCTGATCTACAT-TTGCTATATTAGTGCTGGC 928
consensus_9936#2      ATGGACCTCTAGGACCAGGTACGCCGAAGCCGCTCGACTCGTCCCCACAGGAATTCTTCT 504
                       * *   *  *  * ***   ** **   * * ** **   *  * * *  * * **   

consensus_9936#1      ATCGATCGGTATCGGCATATGTATTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGTT 710
consensus_9936#3      ATCGATCGGTATTGGCATATGTATTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGCT 391
consensus_9936#0      ATCGATCGGTATCGGCATATGTATTAGCGGGTGGTGTTGATTTGATTTTGTTTATTAGTT 988
consensus_9936#2      TTCAGTTTTTTATTGTGACTGCCTAAGCTTGGAGAGCATCTCAATTTCCGTTGAAACACT 564
                       **  *   *    *    **  * ***  *  * *    *    **  *** *     *

consensus_9936#1      TTGTGTTTTTCTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGAC 770
consensus_9936#3      TTGTGTTTTTCTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGAC 451
consensus_9936#0      TTGTGTTTTTCTGCCGATGTATCATTGCGTGCATTATCAGATTGTTGATGTAACACCGAC 1048
consensus_9936#2      TCAGGGAAGCATTTAGCTCTGAGATTTCATGAGACTTCCATCTATTATCCTACCA--AAC 622
                      *   *      *   * * *   *** * **     **    * **    ** **   **

consensus_9936#1      ACTGGATCAAACAATTCATGTTTGTAAAGAAATTATTAAATTGTGGTTAGGTTAATA--- 827
consensus_9936#3      ACTGGATCAAACAATTCATGTTTGTAAAGAAATTATTAAATTGTGGTTAGGTTAAAA--- 508
consensus_9936#0      ACTGGATCAAACAATTCATGTTTGTAAAGAAATTATTAAATTG----------------- 1091
consensus_9936#2      TTCTGGCTGGTTCGTTAGT-TCTATGTGATCTGGATTTGGTTTGTGTAACACTAACATCC 681
                          *         **  * * * *         ***   **                  

consensus_9936#1      ATATGAATCATAATCTTTTACCTT 851
consensus_9936#3      AAAAA------------------- 513
consensus_9936#0      ------------------------
consensus_9936#2      ATTGATATTCTGAGTTTTT----- 700
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)