Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9937 cluster # 9937       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9937#0 length = 1901 sequences # 5  
consensus_9937#1 length = 460 sequences # 1  
consensus_9937#2 length = 294 sequences # 1  

consensusID : consensus_9937#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1901
fasta sequence
                              [ACGCGCTCACGCGGCTCCCGTTTTCGCGGCTGCGTTTTCTCGCTTTCGCCGCAGCTCCTCCCTTCGTCGTCCGTACGACGCCGGCCGGCCGATGCGCCGCCGGTCCAGGGGCGCCGCGGGGTGGTGCTGTTGTCGGTAGGGAGGGAGTGGGGGTGGGTGGGGGGATGATGGCGTACTCGGAGCCGGCGGCGAGGGCGGTGGCGGAGGAGGTGGCGCGGTGGGGAGGGATGAGGCAGACGGGGGTGACGCTGCGGTACATGATGGAGTTCGGGGCGCGCCCCACGGAGAGGAACCTGCTGCGGTCGGCGCAGTTCCTGCGCAGGGAGCTCCCCATCCGCATCGCCCGCCGCGCGCTCGACCTCGACTCCCTCCCCTTCGGCCTCTCC-ACCAAGCCCGCCATCCTCAAGGTGAGAGATTGGTATTTGGACTCATTCCGCGACTTACGGTGCTTCCCGGAGGTGAGGAACCGGGATGATGAGCTTGCATTCACCGAGATGATCAAGATGATTCGAGTGCGGCACAACAATGTGGTGCCCACCATGGCGTTGGGTGTGCGGCAGCTGAAGAAAGACCTGGGTGGCACAAAGGCCTTTCCCCCTGGCATTGATGAGATCCATCAGTTCCTCGACCGCTTCTACATGTCAAGGATTGGGATCCGCATGCTGATAGGGCAGCATGTTACTTTGCATGAGCCTGATCCAGAACCTGGTGTTATTGGACTCATAAGCAAAAGATTATCCCCCATGCTGGTGGCTCAACATGCTACTGAAGATGCACGTGCTATTTGCATGAGGGAATATGGATCAGCCCCTGATGTGAACATATATGGAGACCCAGATTTCACATTTCCATATGTTAAACTACATCTACAACTGATGATGTTTGAATTGGTGAAGAATTCCCTCCGTGCAGTACAGGAACGATATATGAACTCTGATAAGCATGCGCCTCCTGTTAGAATCATAGTCGCTGATGGAGCAGAGGACGTAACAATCAAGATTAGTGATGAAGGTGGTGGAATACCCAGAAGTGGTCTCTCGAGAATTTTCACATATCTCTACAGCACAGCAGAAAACCCACCTGATCTGGATGGCCGTAACGAAGGAGTGA-CCATGGCCGGGTACGGCTATGGGATCCCGATTAGCCGTCTTTATGCTCGATATTTTGGCGGGGACCTGCAGATCATTTCTATGGAAGGATATGGAACCGATGCTTACCTCCACCTATCACGGCTAGGAGATTCGGAGGAGCCCTTGCATTAGGAGATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATACCACTGCTGTAATTAGGATGCTATTGCTTTTACCATTGCTGTGCTGGTATG-CAAATACATAGTTCCCAAGGCCAGCCAGCTCTATGTGCTTCCA--GTTTGCT-GGAGCGTGATCATAA-TTCA-GATTTCAGAATCCCCTCTGGTTCACATTGCCATTAGAACTCGTTATCCCTCGCCCTCGGTGGCTGCCTGAAAAATGTGATGTACA-GTTGTCCGTTTTCGGAGTTCTGCA-TGGGGAGTATCTTTTTTTTCAGAGTTCTGCTTCTGCGATTTGGGTAAGCAAGGATATTGTTAGAAAAAAATATTTCTTGTTTTGCTTAGATAAAAAAAAAATCGGGGGCTGCTAGCTCCCAAGTAAAGTAACAGCCTGACATCTTCGGACCTTACCTTCCTATCGCGGCAGCCGGCAGCCATGTGTTCGGCAG-TGAATGTTTTTACTACGGCAAATTTTGCTACAGCACATCGCGGCTTCGTGGTTTTAGCTGTAGGACACTGCACGTAGTCACTTTTAGAAAAAGACACTTAAAATGTGGTTATTTGCCAGGGGACCAAATGTGGTCATATTTTGTTTATG-CAATAAAATATTAATTTATGGTTCAAAAA]

[+] EMBL AK100033             [ACGCGCTCACGCGGCTCCCGTTTTCGCGGCTGCGTTTTCTCGCTTTCGCCGCAGCTCCTCCCTTCGTCGTCCGTACGACGCCGGCCGGCCGATGCGCCGCCGGTCCAGGGGCGCCGCGGGGTGGTGCTGTTGTCGGTAGGGAGGGAGTGGGGGTGGGTGGGGGGATGATGGCGTACTCGGAGCCGGCGGCGAGGGCGGTGGCGGAGGAGGTGGCGCGGTGGGGAGGGATGAGGCAGACGGGGGTGACGCTGCGGTACATGATGGAGTTCGGGGCGCGCCCCACGGAGAGGAACCTGCTGCGGTCGGCGCAGTTCCTGCGCAGGGAGCTCCCCATCCGCATCGCCCGCCGCGCGCTCGACCTCGACTCCCTCCCCTTCGGCCTCTCC ACCAAGCCCGCCATCCTCAAGGTGAGAGATTGGTATTTGGACTCATTCCGCGACTTACGGTGCTTCCCGGAGGTGAGGAACCGGGATGATGAGCTTGCATTCACCGAGATGATCAAGATGATTCGAGTGCGGCACAACAATGTGGTGCCCACCATGGCGTTGGGTGTGCGGCAGCTGAAGAAAGACCTGGGTGGCACAAAGGCCTTTCCCCCTGGCATTGATGAGATCCATCAGTTCCTCGACCGCTTCTACATGTCAAGGATTGGGATCCGCATGCTGATAGGGCAGCATGTTACTTTGCATGAGCCTGATCCAGAACCTGGTGTTATTGGACTCATAAGCAAAAGATTATCCCCCATGCTGGTGGCTCAACATGCTACTGAAGATGCACGTGCTATTTGCATGAGGGAATATGGATCAGCCCCTGATGTGAACATATATGGAGACCCAGATTTCACATTTCCATATGTTAAACTACATCTACAACTGATGATGTTTGAATTGGTGAAGAATTCCCTCCGTGCAGTACAGGAACGATATATGAACTCTGATAAGCATGCGCCTCCTGTTAGAATCATAGTCGCTGATGGAGCAGAGGACGTAACAATCAAGATTAGTGATGAAGGTGGTGGAATACCCAGAAGTGGTCTCTCGAGAATTTTCACATATCTCTACAGCACAGCAGAAAACCCACCTGATCTGGATGGCCGTAACGAAGGAGTGA CCATGGCCGGGTACGGCTATGGGATCCCGATTAGCCGTCTTTATGCTCGATATTTTGGCGGGGACCTGCAGATCATTTCTATGGAAGGATATGGAACCGATGCTTACCTCCACCTATCACGGCTAGGAGATTCGGAGGAGCCCTTGCATTAGGAGATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATACCACTGCTGTAATTAGGATGCTATTGCTTTTACCATTGCTGTGCTGGTATG CAAATACATAGTTCCCAAGGCCAGCCAGCTCTATGTGCTTCCA  GTTTGCT GGAGCGTGATCATAA TTCA GATTTCAGAATCCCCTCTGGTTCACATTGCCATTAGAACTCGTTATCCCTCGCCCTCGGTGGCTGCCTGAAAAATGTGATGTACA GTTGTCCGTT                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSS14973A            [           CGGCTCCCGTTTTCGCGGCTGCGTTTTCTCGCTTTCGCCGCAGCTCCTCCCTTCGTCGTCCGTACGACGCCGGCCGGCCGATGCGCCGCCGGTCCAGGGGCGCCGCGGGGTGGTGCTGTTGTCGGTAGGGAGGGAGTGGGGGTGGGTGGGGGGATNATGGCGTACTCGGAGCCGGCGGCNAGGGCGGTGGCGGAGGAGGTGGCGCGGTGGGGAGGGATGAGGCAGACGGGGGTAACGCTGCGGTACATNATGGAGTTCGGGGCGCGCCCCACGGAGAGGAACCTGCTGCGGTCGGCGCAGTTCCTGC CAGGGAGCTCCCCATCCGCATCGCCCGCCGCGCGCTTGACCTCGACTCCCTCCCCTTCGGCCTCTCCAACAAAGCCCGCCATCCTNAAGGTGAGAAATTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BI799265             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCTGGATGCCCGTAACGAAGGAGTGACCCAT GCCGGGTAC GCTATGGGATCCCGATTA CCGTCTTTATGCTCGATATTTTGCCGGGGACCT CAGATCATTTCTATGGAAGGATATGGAACCGATGCTTACCTCCACCTATCACGGCTAGGAGATTCGGAGGAGCCCTTGCATTAGGAGATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATACCCCTGCTGTAATTAGGATGCTATTGCTTTTACCCTTGCTGTGCTGGTATGCCAAATACATAGTTCCCAAGGCCAGCCAGCTCTATGTGCTTCCA  GTTTGCT GGAGCGTGATCATAA TTCA GATTTCAGAATCCCCTCTGGTTCACATTGCCATTAGAACTCGTTATCCCTCGCCCTCGGTGGCTGCCTGAAAAATGTGATGTACACGTTGTCCGTTTTCGGAGTTCTGCACTGGGGAGTATCTTTTTTTTCAGAGTTCTGCTTCTGCGATTTGGGTAAGCCAGGATATTGTTAGAAAAAAATATTTCTTGTTTTGCTTAGATAAAAAAAAAATCGGGGGCTGCTAGCTCCCCAGTAAAGTAACCCCCTGAaaaaaaaaa                                                                                                                                                                                                                                 ]
[+] EMBL BI813100             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCTGTGCTGGTA G C AATACATAGTTCCCAA CCAAGCCAGCTCTATGTGCTTCCA  GTTTGCT GGAGCGTGATCATAA TTCA GATTTCAGAATCCCCTCTGGTTCACATTGCCATTAGAACTCGTTATCCCTCGCCCTCGGTGGCTGCCTGAAAAATGTGATGTACA GTTGTCCGTTTTCGGAGTTCTGCA TGGGGAGTATCTTTTTTTTCAGAGTTCTGCTTCTGCGATTTGGGTAAGCAAGGATATTGTTAGAAAAAAATATTTCTTGTTTTGCTTAGATAAAAAAAAAATCGGGGGCTGCTAGCTCCCAAGTAAAGTAACAGCCTGACATCTTCGGACCTTACCTTCCTATCGCGGCAGCCGGCAGCCATGTGTTCGGCAG TGAATGTTTTTACTACGGCAAATTTTGCTACAGCACATCGCGGCTTCGTGGTTTTAGCTGTAGGACACTGCACGTAGTCACTTTTAGAAAAAGACACTTAAAATGTGGTTATTTGCCAGGGGACCAAATGTGGTCATATTTTGTTTATG CAATAAAATATTAATTTATGGTTCAAAAA]
[+] EMBL BI813192             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            caGCC GCCAGCTCTATGT CTTCCACTTTTTGCTGGGAGCGTGATCATAATTTCAGGATTTCAGAATCCCCTCTGGTTCACATT CCATTAGAACTCGTTATCCCTCGCCCTCGGT GCTGCCTGAAAAATGTGATGTACA GTTGTCCGTTTTCGGAGTTCTGCA TGGGGAGTATCTTTTTTTTCAGAGTTCTGCTTCTGCGATTTGGGTAAGCAAGGATATTGTTAGAAAAAAATATTTCTTGTTTTGCTTAGATAAAAAAAAAATCGGGGGCTGCTAGCTCCCAAGTAAAGTAACAGCCTGACATCTTCGGACCTTACCTTCCTATCGC GCAGCC GCA CCATGTGTTC GCAGCTGAATGTTTTTACTACGGCCAATTTTGCTACAGCACATCGCGGCTTCGTGGTTTTAGCTGTAGGACACTGCACGTAGTCACTTTTAGAAAAAGACACTTAAAATGTGGTTATTTGCCAGGGGA CAAATGTGGTCATATTTTGTTTATGCCACTCAAATATTAATTTATGGTTCAAAAA]


>consensus_9937#0 ACGCGCTCACGCGGCTCCCGTTTTCGCGGCTGCGTTTTCTCGCTTTCGCCGCAGCTCCTC CCTTCGTCGTCCGTACGACGCCGGCCGGCCGATGCGCCGCCGGTCCAGGGGCGCCGCGGG GTGGTGCTGTTGTCGGTAGGGAGGGAGTGGGGGTGGGTGGGGGGATGATGGCGTACTCGG AGCCGGCGGCGAGGGCGGTGGCGGAGGAGGTGGCGCGGTGGGGAGGGATGAGGCAGACGG GGGTGACGCTGCGGTACATGATGGAGTTCGGGGCGCGCCCCACGGAGAGGAACCTGCTGC GGTCGGCGCAGTTCCTGCGCAGGGAGCTCCCCATCCGCATCGCCCGCCGCGCGCTCGACC TCGACTCCCTCCCCTTCGGCCTCTCCACCAAGCCCGCCATCCTCAAGGTGAGAGATTGGT ATTTGGACTCATTCCGCGACTTACGGTGCTTCCCGGAGGTGAGGAACCGGGATGATGAGC TTGCATTCACCGAGATGATCAAGATGATTCGAGTGCGGCACAACAATGTGGTGCCCACCA TGGCGTTGGGTGTGCGGCAGCTGAAGAAAGACCTGGGTGGCACAAAGGCCTTTCCCCCTG GCATTGATGAGATCCATCAGTTCCTCGACCGCTTCTACATGTCAAGGATTGGGATCCGCA TGCTGATAGGGCAGCATGTTACTTTGCATGAGCCTGATCCAGAACCTGGTGTTATTGGAC TCATAAGCAAAAGATTATCCCCCATGCTGGTGGCTCAACATGCTACTGAAGATGCACGTG CTATTTGCATGAGGGAATATGGATCAGCCCCTGATGTGAACATATATGGAGACCCAGATT TCACATTTCCATATGTTAAACTACATCTACAACTGATGATGTTTGAATTGGTGAAGAATT CCCTCCGTGCAGTACAGGAACGATATATGAACTCTGATAAGCATGCGCCTCCTGTTAGAA TCATAGTCGCTGATGGAGCAGAGGACGTAACAATCAAGATTAGTGATGAAGGTGGTGGAA TACCCAGAAGTGGTCTCTCGAGAATTTTCACATATCTCTACAGCACAGCAGAAAACCCAC CTGATCTGGATGGCCGTAACGAAGGAGTGACCATGGCCGGGTACGGCTATGGGATCCCGA TTAGCCGTCTTTATGCTCGATATTTTGGCGGGGACCTGCAGATCATTTCTATGGAAGGAT ATGGAACCGATGCTTACCTCCACCTATCACGGCTAGGAGATTCGGAGGAGCCCTTGCATT AGGAGATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATACCACTGCTGTAATTAGGAT GCTATTGCTTTTACCATTGCTGTGCTGGTATGCAAATACATAGTTCCCAAGGCCAGCCAG CTCTATGTGCTTCCAGTTTGCTGGAGCGTGATCATAATTCAGATTTCAGAATCCCCTCTG GTTCACATTGCCATTAGAACTCGTTATCCCTCGCCCTCGGTGGCTGCCTGAAAAATGTGA TGTACAGTTGTCCGTTTTCGGAGTTCTGCATGGGGAGTATCTTTTTTTTCAGAGTTCTGC TTCTGCGATTTGGGTAAGCAAGGATATTGTTAGAAAAAAATATTTCTTGTTTTGCTTAGA TAAAAAAAAAATCGGGGGCTGCTAGCTCCCAAGTAAAGTAACAGCCTGACATCTTCGGAC CTTACCTTCCTATCGCGGCAGCCGGCAGCCATGTGTTCGGCAGTGAATGTTTTTACTACG GCAAATTTTGCTACAGCACATCGCGGCTTCGTGGTTTTAGCTGTAGGACACTGCACGTAG TCACTTTTAGAAAAAGACACTTAAAATGTGGTTATTTGCCAGGGGACCAAATGTGGTCAT ATTTTGTTTATGCAATAAAATATTAATTTATGGTTCAAAAA



consensusID : consensus_9937#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 460
fasta sequence
                              [CAATTTTCACATATCTCTACAGCACAGCACAAAACCCACCTGATCTGGATGGCCGTAACGAACGACTGACCATGGCCGGGTACGGCTATGGGATCCCGATTAGCCGTCTTTATGCTCGATATTTTGGCGGGGACCTGCACATCATTTCTATGGAACGATATGGAACCGATGCTTACCTCCACCTATCACGCTAGGAATTCGGAGGACCCTTGCATTACGAATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATACCACTGCTGTAATTAGGATGCTATTGCTTTTACCATTGCTGTGCTGGTATGCAAATACATATTCCCCAGGGCCAGCCAGCTCTATGTGCTTCCAGTTTTGCTGGAGCGTGATCATAATTCAATTTCCAAATCCCCTCTGGTTCACATTGCCATTAAAAACTCCTTTAAAAAAAAAAAAAAAAAAANNAACTCCAANGGGGGGGC]

[+] EMBL AA754111             [CAATTTTCACATATCTCTACAGCACAGCACAAAACCCACCTGATCTGGATGGCCGTAACGAACGACTGACCATGGCCGGGTACGGCTATGGGATCCCGATTAGCCGTCTTTATGCTCGATATTTTGGCGGGGACCTGCACATCATTTCTATGGAACGATATGGAACCGATGCTTACCTCCACCTATCACGCTAGGAATTCGGAGGACCCTTGCATTACGAATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATACCACTGCTGTAATTAGGATGCTATTGCTTTTACCATTGCTGTGCTGGTATGCAAATACATATTCCCCAGGGCCAGCCAGCTCTATGTGCTTCCAGTTTTGCTGGAGCGTGATCATAATTCAATTTCCAAATCCCCTCTGGTTCACATTGCCATTAAAAACTCCTTTAAAAAAAAAAAAAAAAAAANNAACTCCAANGGGGGGGC]


>consensus_9937#1 CAATTTTCACATATCTCTACAGCACAGCACAAAACCCACCTGATCTGGATGGCCGTAACG AACGACTGACCATGGCCGGGTACGGCTATGGGATCCCGATTAGCCGTCTTTATGCTCGAT ATTTTGGCGGGGACCTGCACATCATTTCTATGGAACGATATGGAACCGATGCTTACCTCC ACCTATCACGCTAGGAATTCGGAGGACCCTTGCATTACGAATCTGGAGGAGGAAACCCTT TGCCTCAGTTCTGATACCACTGCTGTAATTAGGATGCTATTGCTTTTACCATTGCTGTGC TGGTATGCAAATACATATTCCCCAGGGCCAGCCAGCTCTATGTGCTTCCAGTTTTGCTGG AGCGTGATCATAATTCAATTTCCAAATCCCCTCTGGTTCACATTGCCATTAAAAACTCCT TTAAAAAAAAAAAAAAAAAAANNAACTCCAANGGGGGGGC



consensusID : consensus_9937#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 294
fasta sequence
                              [NATGGAANGGATATGGAACCCGATTGCTTACTCCACCTTTCACGGCTNGGAGATTCGGAGGAGCCCTTGCATTAGGAGATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATNCCACTGCTGTAATTNGGATGCTATTGCTTTTACCATTGCTGTGCTGGTATGCAAATNCATAGTTCCCAAGGCCAGCCAGCTCTATGTGCTTCCAGTTTGCTGGAGCGTGATCATAATTCAGATTTCAGAATCCCCTCTGGTTTCTACATTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU075525             [NATGGAANGGATATGGAACCCGATTGCTTACTCCACCTTTCACGGCTNGGAGATTCGGAGGAGCCCTTGCATTAGGAGATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATNCCACTGCTGTAATTNGGATGCTATTGCTTTTACCATTGCTGTGCTGGTATGCAAATNCATAGTTCCCAAGGCCAGCCAGCTCTATGTGCTTCCAGTTTGCTGGAGCGTGATCATAATTCAGATTTCAGAATCCCCTCTGGTTTCTACATTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9937#2 NATGGAANGGATATGGAACCCGATTGCTTACTCCACCTTTCACGGCTNGGAGATTCGGAG GAGCCCTTGCATTAGGAGATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATNCCACTG CTGTAATTNGGATGCTATTGCTTTTACCATTGCTGTGCTGGTATGCAAATNCATAGTTCC CAAGGCCAGCCAGCTCTATGTGCTTCCAGTTTGCTGGAGCGTGATCATAATTCAGATTTC AGAATCCCCTCTGGTTTCTACATTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      ACGCGCTCACGCGGCTCCCGTTTTCGCGGCTGCGTTTTCTCGCTTTCGCCGCAGCTCCTC 60
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      CCTTCGTCGTCCGTACGACGCCGGCCGGCCGATGCGCCGCCGGTCCAGGGGCGCCGCGGG 120
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      GTGGTGCTGTTGTCGGTAGGGAGGGAGTGGGGGTGGGTGGGGGGATGATGGCGTACTCGG 180
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      AGCCGGCGGCGAGGGCGGTGGCGGAGGAGGTGGCGCGGTGGGGAGGGATGAGGCAGACGG 240
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      GGGTGACGCTGCGGTACATGATGGAGTTCGGGGCGCGCCCCACGGAGAGGAACCTGCTGC 300
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      GGTCGGCGCAGTTCCTGCGCAGGGAGCTCCCCATCCGCATCGCCCGCCGCGCGCTCGACC 360
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      TCGACTCCCTCCCCTTCGGCCTCTCCACCAAGCCCGCCATCCTCAAGGTGAGAGATTGGT 420
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      ATTTGGACTCATTCCGCGACTTACGGTGCTTCCCGGAGGTGAGGAACCGGGATGATGAGC 480
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      TTGCATTCACCGAGATGATCAAGATGATTCGAGTGCGGCACAACAATGTGGTGCCCACCA 540
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      TGGCGTTGGGTGTGCGGCAGCTGAAGAAAGACCTGGGTGGCACAAAGGCCTTTCCCCCTG 600
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      GCATTGATGAGATCCATCAGTTCCTCGACCGCTTCTACATGTCAAGGATTGGGATCCGCA 660
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      TGCTGATAGGGCAGCATGTTACTTTGCATGAGCCTGATCCAGAACCTGGTGTTATTGGAC 720
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      TCATAAGCAAAAGATTATCCCCCATGCTGGTGGCTCAACATGCTACTGAAGATGCACGTG 780
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      CTATTTGCATGAGGGAATATGGATCAGCCCCTGATGTGAACATATATGGAGACCCAGATT 840
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      TCACATTTCCATATGTTAAACTACATCTACAACTGATGATGTTTGAATTGGTGAAGAATT 900
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      CCCTCCGTGCAGTACAGGAACGATATATGAACTCTGATAAGCATGCGCCTCCTGTTAGAA 960
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      TCATAGTCGCTGATGGAGCAGAGGACGTAACAATCAAGATTAGTGATGAAGGTGGTGGAA 1020
                                                                                  

consensus_9937#1      ---------------------CAATTTTCACATATCTCTACAGCACAGCACAAAACCCAC 39
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      TACCCAGAAGTGGTCTCTCGAGAATTTTCACATATCTCTACAGCACAGCAGAAAACCCAC 1080
                                                                                  

consensus_9937#1      CTGATCTGGATGGCCGTAACGAACGACTGACCATGGCCGGGTACGGCTATGGGATCCCGA 99
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      CTGATCTGGATGGCCGTAACGAAGGAGTGACCATGGCCGGGTACGGCTATGGGATCCCGA 1140
                                                                                  

consensus_9937#1      TTAGCCGTCTTTATGCTCGATATTTTGGCGGGGACCTGCACATCATTTCTATGGAACG-A 158
consensus_9937#2      -------------------------------------------------NATGGAANGGA 11
consensus_9937#0      TTAGCCGTCTTTATGCTCGATATTTTGGCGGGGACCTGCAGATCATTTCTATGGAAGG-A 1199
                                                                        ****** * *

consensus_9937#1      TATGGAACC-GATGCTTACCTCCACCTATCACG-CTAGGA-ATTCGGAGGA-CCCTTGCA 214
consensus_9937#2      TATGGAACCCGATTGCTTACTCCACCTTTCACGGCTNGGAGATTCGGAGGAGCCCTTGCA 71
consensus_9937#0      TATGGAACC-GATGCTTACCTCCACCTATCACGGCTAGGAGATTCGGAGGAGCCCTTGCA 1258
                      ********* ***   *  ******** ***** ** *** ********** ********

consensus_9937#1      TTACGA-ATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATACCACTGCTGTAATTAGG 273
consensus_9937#2      TTAGGAGATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATNCCACTGCTGTAATTNGG 131
consensus_9937#0      TTAGGAGATCTGGAGGAGGAAACCCTTTGCCTCAGTTCTGATACCACTGCTGTAATTAGG 1318
                      *** ** *********************************** ************** **

consensus_9937#1      ATGCTATTGCTTTTACCATTGCTGTGCTGGTATGCAAATACATATTCCCCAGGGCCAGCC 333
consensus_9937#2      ATGCTATTGCTTTTACCATTGCTGTGCTGGTATGCAAATNCATAGTTCCCAAGGCCAGCC 191
consensus_9937#0      ATGCTATTGCTTTTACCATTGCTGTGCTGGTATGCAAATACATAGTTCCCAAGGCCAGCC 1378
                      *************************************** **** * **** ********

consensus_9937#1      AGCTCTATGTGCTTCCAGTTTTGCTGGAGCGTGATCATAATTCA-ATTTCCAAATCCCCT 392
consensus_9937#2      AGCTCTATGTGCTTCCAGTTT-GCTGGAGCGTGATCATAATTCAGATTTCAGAATCCCCT 250
consensus_9937#0      AGCTCTATGTGCTTCCAGTTT-GCTGGAGCGTGATCATAATTCAGATTTCAGAATCCCCT 1437
                      ********************* ********************** *****  ********

consensus_9937#1      CTGGTTC--ACATTGCCATTAAAAACT-----------CCTTTAAAAAAAAAAAAAAAAA 439
consensus_9937#2      CTGGTTTCTACATTGCCAAAAAAAA------------------AAAAAAAAAAAAAAAAA 292
consensus_9937#0      CTGGTTC--ACATTGCCATTAGAACTCGTTATCCCTCGCCCTCGGTGGCTGCCTGAAAAA 1495
                      ******   *********  * **                               *****

consensus_9937#1      AANNAACTCCAANGGGGGGGC--------------------------------------- 460
consensus_9937#2      AA---------------------------------------------------------- 294
consensus_9937#0      TGTGATGTACAGTTGTCCGTTTTCGGAGTTCTGCATGGGGAGTATCTTTTTTTTCAGAGT 1555
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      TCTGCTTCTGCGATTTGGGTAAGCAAGGATATTGTTAGAAAAAAATATTTCTTGTTTTGC 1615
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      TTAGATAAAAAAAAAATCGGGGGCTGCTAGCTCCCAAGTAAAGTAACAGCCTGACATCTT 1675
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      CGGACCTTACCTTCCTATCGCGGCAGCCGGCAGCCATGTGTTCGGCAGTGAATGTTTTTA 1735
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      CTACGGCAAATTTTGCTACAGCACATCGCGGCTTCGTGGTTTTAGCTGTAGGACACTGCA 1795
                                                                                  

consensus_9937#1      ------------------------------------------------------------
consensus_9937#2      ------------------------------------------------------------
consensus_9937#0      CGTAGTCACTTTTAGAAAAAGACACTTAAAATGTGGTTATTTGCCAGGGGACCAAATGTG 1855
                                                                                  

consensus_9937#1      ----------------------------------------------
consensus_9937#2      ----------------------------------------------
consensus_9937#0      GTCATATTTTGTTTATGCAATAAAATATTAATTTATGGTTCAAAAA 1901
                                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)