cluster # 9939

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Oryza sativa
cluster # 9939 cluster # 9939 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9939#0 length = 993 sequences # 7
consensusID : consensus_9939#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 993
fasta sequence
                              [AGGCCGGAGGAGGAGCCGCGGCGGCCTGACCCGGACGCCGACCTCGGGATCGTGTTCTCCACGTTCGACCACGACGGCGACGGCTTCATCACGGCGGCGGAGCTGGAGGAGTCCCTGAAGCGCCTCGGCATCGCCGTGTCGTCCGCCGCCGAGGCCGCCGCCCTGGTGGCCCGCGTCGACGCCAACAGCGACGGGCTCATCGATATCCACGAGTTCCGCGAGCTCTACGACTCCATCCCCAAGCGGCGCAAGAGCCACCAGCAGCACCCGCTCCCCTCCACCGCCGCCGCCGACGAGGAAGCCGCCGCCGCTGACGAGGAGTATGAAGCAGAGGAGGAGGAGAGGGACCTGAGGGAGGCGTTCGACGTGTTCGACGGCAACAAGGACGGCCTCATCTCCGCCGAGGAGCTCGGCACCGTGCTCGAGTCCCTCGGCCTCCGCCAGCACGGCGGCCGCCCCGCCGTCGCCGAGTGCCGCGACATGATCCGCCTCGTCGACAGCGACGGCGACGGCATGGTCAGCTTCGAGGAGTTCAAGCGCATGATGACCGTCGTCAAGGCCTAGCACCAAGGCGGGCAATCTCCAACTTCTATCAAATTCAAATTCAAAAACCAAAATTCGGAGCGGATTCGCAAAGGCAAGTAACCTCAATTTGTTCTTGGACACGACGAGGCTCGCAGATCGATCGGCGGGAGAGAGAAATCAAAGCAAAAAATCAATTGTTTGTGAGTGGAGTTGAAGACTAACCAGCTTCTTCTTCTCGCTCGCTTTGTGTTTCTTCCCACCTGTTCTTGATCACTTTCTTTGGTTTTTTTTCTCTCTTTTTTGCAGTCTAATTAACCTCGTAATTCAGTGCCTGTTTTGACTGACAAGTTTCAAATATATGCATGTAAATATTAGTTCCTGCTACCTACTGTCAGGTTATTAATTTGTCCAAAAGAAACAGTGGCTGAAATGGAAAGGTTTAATTGATATTATTAGCTGTTAAAAAAA]

[+] EMBL AK105920             [AGGCCGGAGGAGGAGCCGCGGCGGCCTGACCCGGACGCCGACCTCGGGATCGTGTTCTCCACGTTCGACCACGACGGCGACGGCTTCATCACGGCGGCGGAGCTGGAGGAGTCCCTGAAGCGCCTCGGCATCGCCGTGTCGTCCGCCGCCGAGGCCGCCGCCCTGGTGGCCCGCGTCGACGCCAACAGCGACGGGCTCATCGATATCCACGAGTTCCGCGAGCTCTACGACTCCATCCCCAAGCGGCGCAAGAGCCACCAGCAGCACCCGCTCCCCTCCACCGCCGCCGCCGACGAGGAAGCCGCCGCCGCTGACGAGGAGTATGAAGCAGAGGAGGAGGAGAGGGACCTGAGGGAGGCGTTCGACGTGTTCGACGGCAACAAGGACGGCCTCATCTCCGCCGAGGAGCTCGGCACCGTGCTCGAGTCCCTCGGCCTCCGCCAGCACGGCGGCCGCCCCGCCGTCGCCGAGTGCCGCGACATGATCCGCCTCGTCGACAGCGACGGCGACGGCATGGTCAGCTTCGAGGAGTTCAAGCGCATGATGACCGTCGTCAAGGCCTAGCACCAAGGCGGGCAATCTCCAACTTCTATCAAATTCAAATTCAAAAACCAAAATTCGGAGCGGATTCGCAAAGGCAAGTAACCTCAATTTGTTCTTGGACACGACGAGGCTCGCAGATCGATCGGCGGGAGAGAGAAATCAAAGCAAAAAATCAATTGTTTGTGAGTGGAGTTGAAGACTAACCAGCTTCTTCTTCTCGCTCGCTTTGTGTTTCTTCCCACCTGTTCTTGATCACTTTCTTTGGTTTTTTTTCTCTCTTTTTTGCAGTCTAATTAACCTCGTAATTCAGTGCCTGTTTTGACTGACAAGTTTCAAATATATGCATGTAAATATTAGTTCCTGCTACCTACTGTCAGGTTATTAATTTGTCCAAAAGAAACAGTGGCTGAAATGGAAAGGTTTAATTGATATT                 ]
[+] EMBL AK070725             [AGGCCGGAGGAGGAGCCGCGGCGGCCTGACCCGGACGCCGACCTCGGGATCGTGTTCTCCACGTTCGACCACGACGGCGACGGCTTCATCACGGCGGCGGAGCTGGAGGAGTCCCTGAAGCGCCTCGGCATCGCCGTGTCGTCCGCCGCCGAGGCCGCCGCCCTGGTGGCCCGCGTCGACGCCAACAGCGACGGGCTCATCGATATCCACGAGTTCCGCGAGCTCTACGACTCCATCCCCAAGCGGCGCAAGAGCCACCAGCAGCACCCGCTCCCCTCCACCGCCGCCGCCGACGAGGAAGCCGCCGCCGCTGACGAGGAGTATGAAGCAGAGGAGGAGGAGAGGGACCTGAGGGAGGCGTTCGACGTGTTCGACGGCAACAAGGACGGCCTCATCTCCGCCGAGGAGCTCGGCACCGTGCTCGAGTCCCTCGGCCTCCGCCAGCACGGCGGCCGCCCCGCCGTCGCCGAGTGCCGCGACATGATCCGCCTCGTCGACAGCGACGGCGACGGCATGGTCAGCTTCGAGGAGTTCAAGCGCATGATGACCGTCGTCAAGGCCTAGCACCAAGGCGGGCAATCTCCAACTTCTATCAAATTCAAATTCAAAAACCAAAATTCGGAGCGGATTCGCAAAGGCAAGTAACCTCAATTTGTTCTTGGACACGACGAGGCTCGCAGATCGATCGGCGGGAGAGAGAAATCAAAGCAAAAAATCAATTGTTTGTGAGTGGAGTTGAAGACTAACCAGCTTCTTCTTCTCGCTCGCTTTGTGTTTCTTCCCACCTGTTCTTGATCACTTTCTTTGGTTTTTTTTCTCTCTTTTTTGCAGTCTAATTAACCTCGTAATTCAGTGCCTGTTTTGACTGACAAGTTTCAAATATATGCATGTAAATATTAGTTCCTGCTACCTACTGTCAGGTTATTAATTTGTCCAAAAGAAACAGTGGCTGAAATGGAAA                                ]
[+] EMBL AU078358             [                                                                                                                       GCGCCTCGGCATCGCCGTGTCGTCCGCCGCCGAGGCCGCCGCCCTGGTGGCCCGCGTCGACGCCAACAGCGACGGGCTCATCGATATCCACGAGTTCCGCGAGCTCTACGACTCCATCCCCAAGCGGCGCAAGAGCCACCAGCAGCACCCGCTCCCCTCCACCGCCGCCGCCGACGAGGAAGCCGCCGCCGCTGACGAGGAGTATGAAGCAGAGGAGGAGGAGAGGGACCTGAGGGAGGCGTTCGACGTGTTCGACGGCAACAAGGACGGCCTCATCTCCGCCGAGGAGCTCGGCACCGTGCTCGAGTCCCTCGGCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL AU176459             [                                                                                                                                             TCCGCCGCCGAGGCCGCCGCCCTGGTGGCCCGCGTCGACGCCAACAGCGACGGGCTCATCGATATCCACGAGTTCCGCGAGCTCTACGACTCCATCCCCAAGCGGCGCAAGAGCCACCAGCAGCACCCGCTCCCCTCCACCGCCGCCGCCGACGAGGAAGCCGCCGCCGCTGACGAGGAGTATGAAGCAGAGGAGGAGGAGAGGGACCTGAGGGAGGCGTTCGACGTGTTCGACGGCAACAAGGACGGCCTCATCTCCGCCGAGGAGCTCGGCACCGTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA757480             [                                                                                                                                                                                                                                  ACGACTCCATCCCCAAGCGGCGCAAGAGCCACCAGCAGCACCCGCTCCCCTCCACCGCCGCCGCCGACGAGGAAGCCGCCGCCGCTGACGAGGAGTATGAAGCAGAGGAGGAGGAGAGGGACCTGAGGGAGGCGTTCGACGTGTTCGATGGCAACAAGGACGGCCTCATCTCCGCCGAGGAGCTCGGCACCGTGCTCGGGTCCCTCGGCCTCCGCCAGCACGGCGGCCGCCCCGCCGTCGCCGAGTGCCGCGACATGATCCGCCTCGTCGACAGCGACGGCGACGGCATGGTCAGCTTCGAGGAGTTCAAGCGCATGATGACCGTCGTCAAGGCCTAGCACCAAGGCGGGCAATCTCCAACTTCTATCAAATTGAAATTCAAAAACCAAAATTCGGAGCGGATTCGCAAAGGCAAGTTACCTCGATTTGTTCTTGGACACAACGAGGCTCGCAGATCGATCGGCGGGAGAGAGAAATCAAAGCAAAAAATCAATTGTTTGTGAGTGGAGTTGAAGACTAACCAGCTTCTTCTTCTCGCTCGCTTTGTGTTTCTTCCCACCTGTTCTTGATCACTTTCTTTGGTTTTTTT  TCTCTTTTTTGCAGTCTAATTAACCTCGTAATTCAGTGCCTGTTTTGACTGACAAGTTTCAAATATATGCATGTAAATATTAGTTCCTGCTACCTACTGTCAGGTTATTAATTTGTCCAAAAGAAACAGTGGCTGAAATGGAAAGGTTT ATTGATATTATTAGCTGTTAAAAAAA]
[-] EMBL CB634308             [                                                                                                                                                                                                                                                                                                                                                     GAGGGACCTGAGGGAGGCGTTCGACGTGTTCAACGGCAACAAGGACGGCCTCATCTCCGCCGAGGAGCTCGGCACCGTGCTCGAGTCCCTCGGCCTCCGCCAGCACGGCGGCCGCCCCGCCGTCGCCGAGTGCCGCGACATGATCCCCCTCGTCGACAGCGACGGCGACGGCATGGTCAGCTTCGAGGAGTTCAAGCGCATGATGACCGTCGTCAAGGCCTAGCACCAAGGCGGGCAATCTCCAACTTCTATCAAATTCAAATTCAAAAACCAAAATTCGGAGCGGATTCGCAAAGCCAAGTAACCTCAATTTGTTCTTGGACACGACGAGGCTCGCAGATCGATCGGCGGGAGAGAGAAATCAAAGCAAAAAATCAATTGTTTGTGAGTGGAGTTGAAGACTAACCAGCTTCTTCTTCTCGCTCGCTTTGTGTTTCTTCCCACCTGTTCTTGATCACTTTCTTTGGTTTTTTTTCTCTCTTTTTTGCAGTTTAATTAACCTCGTAATTCAGTGCCTGTTTTGACTGACAAGTTTCAAATTTTTAGAAGTAAATATTAGTTCCTGCTACCTACTGTCAGGTTATTAATT                                                               ]
[+] EMBL CB634307             [                                                                                                                                                                                                                                                                                                                                                                                   nGACGGGAACGAGGACGGGCTCATCTCCGCCGAGGAGCTCGGCACCGTGCTCGAGTCCCTCGGCCTCCGCCAGCACGGCGGGCGCCCCGCCGTCGCCGAGTGCCGCGACATGATCCGCCTCGTCGACAGCGACGGCGACGGCATGGTCAGCTTCGAGGAGTTCAAGCGCATGATGACCGTCGTCAAGGCCTAGCACCATTGTGGGCAATCTCCAACTTCTATCAATTTGGGGTGCAAAAACCAAAATTCGGAGCGGATTCGCAAAGGCAAGTAACCTCAATTTGTTCTTGGACACGACGAGGCTCGCAGATCGATCGGCGGGAGAGAGAAATCAAAGCAAAAAATCAATTGTTTGTGAGTGGAGTTGAAGACTAACCAGCTTCTTCTTCTCGCTCGCTTTGTGTTTCTTCCCACCTGTTCTTGATCACTTTCTTTGGTTTTTTTTCTCTCTTTTTTGCAGTCTAATTAACCTCGTAATTCAGTGCCTGTTTTGACTGACAAGTTTCAAATATATGCATGTAAATATTAGTTCCTGCTACCTACTGTCAGGTTATTAATTTGTCCAAAAGAAACAGTGGCTGAAATGGAAAGGTT                            ]




>consensus_9939#0
AGGCCGGAGGAGGAGCCGCGGCGGCCTGACCCGGACGCCGACCTCGGGATCGTGTTCTCC
ACGTTCGACCACGACGGCGACGGCTTCATCACGGCGGCGGAGCTGGAGGAGTCCCTGAAG
CGCCTCGGCATCGCCGTGTCGTCCGCCGCCGAGGCCGCCGCCCTGGTGGCCCGCGTCGAC
GCCAACAGCGACGGGCTCATCGATATCCACGAGTTCCGCGAGCTCTACGACTCCATCCCC
AAGCGGCGCAAGAGCCACCAGCAGCACCCGCTCCCCTCCACCGCCGCCGCCGACGAGGAA
GCCGCCGCCGCTGACGAGGAGTATGAAGCAGAGGAGGAGGAGAGGGACCTGAGGGAGGCG
TTCGACGTGTTCGACGGCAACAAGGACGGCCTCATCTCCGCCGAGGAGCTCGGCACCGTG
CTCGAGTCCCTCGGCCTCCGCCAGCACGGCGGCCGCCCCGCCGTCGCCGAGTGCCGCGAC
ATGATCCGCCTCGTCGACAGCGACGGCGACGGCATGGTCAGCTTCGAGGAGTTCAAGCGC
ATGATGACCGTCGTCAAGGCCTAGCACCAAGGCGGGCAATCTCCAACTTCTATCAAATTC
AAATTCAAAAACCAAAATTCGGAGCGGATTCGCAAAGGCAAGTAACCTCAATTTGTTCTT
GGACACGACGAGGCTCGCAGATCGATCGGCGGGAGAGAGAAATCAAAGCAAAAAATCAAT
TGTTTGTGAGTGGAGTTGAAGACTAACCAGCTTCTTCTTCTCGCTCGCTTTGTGTTTCTT
CCCACCTGTTCTTGATCACTTTCTTTGGTTTTTTTTCTCTCTTTTTTGCAGTCTAATTAA
CCTCGTAATTCAGTGCCTGTTTTGACTGACAAGTTTCAAATATATGCATGTAAATATTAG
TTCCTGCTACCTACTGTCAGGTTATTAATTTGTCCAAAAGAAACAGTGGCTGAAATGGAA
AGGTTTAATTGATATTATTAGCTGTTAAAAAAA
clustalw multiple alignements is not computed in this case