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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9949#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1213 fasta sequence
[CTTTTTTTTTGTTGTCGCATCCATCTTTTGCACAACCTTTCACAATGGCTCAAGGTGAAGTTAACCAGGGCGAGAAGTCCGTCCTCGGCATGCCCGGCTTCGTTGTCGACTTCCTGATGGGTGGTGTTTCCGCCGCTGTCTCCAAGACCGCTGCTGCCCCCATTGAGCGTATCAAGCTCCTGATCCAGAACCAGGACGAGATGCTCAAGGCTGTCGTCTTTCCCACAAGTACAACGGTCTCGCCGACTGCTTCAAGCGTACTGCCGCTGATGAGGGTATCGTCTCTCTGTGGCGTGGTAACACCGCCAACGTCATCCGTTACTTCCCTACCCAGGCCCTGAACTTCGCTTTCCGCGACACCTACAAGTCCATGTTCGCCTACAAGAAGGAGCGTGATGGATACGCCAAGTGGATGATGGGTAACCTGGCCTCCGGTGGTGCTGCCGGTGCCACTTCCCTGCTTTTCGTCTACTCCCTGGACTACGCCCGTACCCGTCTGGCCAACGACGCTAAGTCCACCAAGGGTGGCGGTGACCGTCAGTTCAACGGTCTCGTTGACGTCTACCGCAAGACCCTCGCCTCCGACGGTATTGCCGGTCTCTACCGTGGTTTCGGTCCCTCCGTCGTCGGTATCGTCGTCTACCGTGGTCTGTACTTCGGTATGTACGACTCTATCAAGCCCGTTCTCCTGGTCGGTCCTCTTGAGGGCTCTTTCCTCGCTTCCTTCCTGCTCGGCTGGACTGTTACCACTGCTGCTGGTGTTGCTTCCTACCCTCTGGACACTATCCGTCGTCGTATGATGATGACCTCCGGTGAGGCCGTCAAGTACTCCTCCTCCATGGATGCTGCCCGCCAGATCATCGCCAAGGAGGGTACCAAGTCCCTGTTCAAGGGTGCCGGTGCCAACATCCTCCGTGGTGTTGCCGGTGCTGGTGTCCTGTCCATCTACGATCAGGTCCAGCTGATCCTCTTCGGCAAGAAGTTCAAATAGATAACTCGCCCCTAGCGAATTATCTAACACCTGTAGCTATACTGGGGATGGGGATGATACCCTGCCCGGTATGACCGGGTGATGGGGAAGCAGAGGATGTGGGAAGTGCAAAAGATAGATGCGTCAAGAAATGGGTTCGGGGGGATCTTGAAGCATAGAATGGTGTGATTCTTCCCTTTTTGTACCCGATGTACTTTACTGCCTGCAAACTCTTTTTCTTTT]
[+] EMBL AK110815 [CTTTTTTTTTGTTGTCGCATCCATCTTTTGCACAACCTTTCACAATGGCTCAAGGTGAAGTTAACCAGGGCGAGAAGTCCGTCCTCGGCATGCCCGGCTTCGTTGTCGACTTCCTGATGGGTGGTGTTTCCGCCGCTGTCTCCAAGACCGCTGCTGCCCCCATTGAGCGTATCAAGCTCCTGATCCAGAACCAGGACGAGATGCTCAAGGCTGTCGTCTTTCCCACAAGTACAACGGTCTCGCCGACTGCTTCAAGCGTACTGCCGCTGATGAGGGTATCGTCTCTCTGTGGCGTGGTAACACCGCCAACGTCATCCGTTACTTCCCTACCCAGGCCCTGAACTTCGCTTTCCGCGACACCTACAAGTCCATGTTCGCCTACAAGAAGGAGCGTGATGGATACGCCAAGTGGATGATGGGTAACCTGGCCTCCGGTGGTGCTGCCGGTGCCACTTCCCTGCTTTTCGTCTACTCCCTGGACTACGCCCGTACCCGTCTGGCCAACGACGCTAAGTCCACCAAGGGTGGCGGTGACCGTCAGTTCAACGGTCTCGTTGACGTCTACCGCAAGACCCTCGCCTCCGACGGTATTGCCGGTCTCTACCGTGGTTTCGGTCCCTCCGTCGTCGGTATCGTCGTCTACCGTGGTCTGTACTTCGGTATGTACGACTCTATCAAGCCCGTTCTCCTGGTCGGTCCTCTTGAGGGCTCTTTCCTCGCTTCCTTCCTGCTCGGCTGGACTGTTACCACTGCTGCTGGTGTTGCTTCCTACCCTCTGGACACTATCCGTCGTCGTATGATGATGACCTCCGGTGAGGCCGTCAAGTACTCCTCCTCCATGGATGCTGCCCGCCAGATCATCGCCAAGGAGGGTACCAAGTCCCTGTTCAAGGGTGCCGGTGCCAACATCCTCCGTGGTGTTGCCGGTGCTGGTGTCCTGTCCATCTACGATCAGGTCCAGCTGATCCTCTTCGGCAAGAAGTTCAAATAGATAACTCGCCCCTAGCGAATTATCTAACACCTGTAGCTATACTGGGGATGGGGATGATACCCTGCCCGGTATGACCGGGTGATGGGGAAGCAGAGGATGTGGGAAGTGCAAAAGATAGATGCGTCAAGAAATGGGTTCGGGGGGATCTTGAAGCATAGAATGGTGTGATTCTTCCCTTTTTGTACCCGATGTACTTTACTGCCTGCAAACTCTTTTTCTTTT]
consensusID : consensus_9949#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1081 fasta sequence
[CCACCTCTCTTTCGTAGTACAGTCAAAATGGGTACCGTCGCTGACCCCGCCAAGACCAAGAAGACCATGAGTGGCTTCGCCACCGACTTCCTCATGGGTGGTGTTTCCGCCGCCGTCTCCAAGACGGCTGCTGCCCCCATTGAGCGAATCAAGCTCCTCATCCAGAACCAGGACGAGATGATCAAGCAGGGCCGTCTTGCCGCCCCCTACAAGGGCATTGGCGACTGCTTCGTCCGCACCTACCAGCAGGAGGGCATGGTTTCGCTCTGGCGTGGTAACACCGCTAACGTCATCCGTTACTTCCCCACCCAGGCGCTCAACTTCGCCTTCAAGGACTTCTTCAAGTCGCTCTTCGCCGTCCCCAAGACCGCTCCCTACTGGAAGTCGCTCACGGCCAACCTTGCCTCCGGTGGTGCCGCCGGTGCCTCGTCGCTCCTCTTCGTCTACTCGCTCGACTACGCCCGTACCCGTCTTGCCAACGACGCCAAGTCGGCTGCCAAGGGCGGAGGAGACCGCCAGTTCAACGGCCTCGTCGACGTCTACCGCAAGACCATTGCCTCGGACGGTGTCGCCGGTCTCTACCGTGGCTTCGTCCCCTCGGTCGTCGGTATCGTCGTCTACCGCGGTCTCTACTTCGGCATGTACGACTCGCTCAAGCCCGTCCTGCTCACCGGCAACCTCTCGAACAACTTCCTCGCCTCGTTCCTCCTCGGCTGGGGTGTTACCACCGGTGCTGGTCTTGCTTCCTACCCTCTCGACACCATCCGTCGTCGCATGATGATGACCTCGGGTGGCAAGGTTCACTACAAGAACATGTTCGATGCCGGTCGCTCCATCGTCGCCGCCGAGGGTGTCTCGTCGCTCTTCAAGGGTGCCGGTGCCAACATTCTCCGTGGTATCGCCGGTGCCGGTGTGCTCTCCGGTTACGACAAGCTCCAGGAGGTCATGTTCGGCAAGGTCTACAAGGGCGGCTCCGGTTAAACGGTCCCCTGCGTACTCTTCGCTCCTCCTCCCCCTCCCTTCTGTGCAGTCGGCCCGGCCCATTCCCCGATGCCGGTCTTCATGGAATGAAAACTCAGCT]
[+] EMBL AK108179 [CCACCTCTCTTTCGTAGTACAGTCAAAATGGGTACCGTCGCTGACCCCGCCAAGACCAAGAAGACCATGAGTGGCTTCGCCACCGACTTCCTCATGGGTGGTGTTTCCGCCGCCGTCTCCAAGACGGCTGCTGCCCCCATTGAGCGAATCAAGCTCCTCATCCAGAACCAGGACGAGATGATCAAGCAGGGCCGTCTTGCCGCCCCCTACAAGGGCATTGGCGACTGCTTCGTCCGCACCTACCAGCAGGAGGGCATGGTTTCGCTCTGGCGTGGTAACACCGCTAACGTCATCCGTTACTTCCCCACCCAGGCGCTCAACTTCGCCTTCAAGGACTTCTTCAAGTCGCTCTTCGCCGTCCCCAAGACCGCTCCCTACTGGAAGTCGCTCACGGCCAACCTTGCCTCCGGTGGTGCCGCCGGTGCCTCGTCGCTCCTCTTCGTCTACTCGCTCGACTACGCCCGTACCCGTCTTGCCAACGACGCCAAGTCGGCTGCCAAGGGCGGAGGAGACCGCCAGTTCAACGGCCTCGTCGACGTCTACCGCAAGACCATTGCCTCGGACGGTGTCGCCGGTCTCTACCGTGGCTTCGTCCCCTCGGTCGTCGGTATCGTCGTCTACCGCGGTCTCTACTTCGGCATGTACGACTCGCTCAAGCCCGTCCTGCTCACCGGCAACCTCTCGAACAACTTCCTCGCCTCGTTCCTCCTCGGCTGGGGTGTTACCACCGGTGCTGGTCTTGCTTCCTACCCTCTCGACACCATCCGTCGTCGCATGATGATGACCTCGGGTGGCAAGGTTCACTACAAGAACATGTTCGATGCCGGTCGCTCCATCGTCGCCGCCGAGGGTGTCTCGTCGCTCTTCAAGGGTGCCGGTGCCAACATTCTCCGTGGTATCGCCGGTGCCGGTGTGCTCTCCGGTTACGACAAGCTCCAGGAGGTCATGTTCGGCAAGGTCTACAAGGGCGGCTCCGGTTAAACGGTCCCCTGCGTACTCTTCGCTCCTCCTCCCCCTCCCTTCTGTGCAGTCGGCCCGGCCCATTCCCCGATGCCGGTCTTCATGGAATGAAAACTCAGCT]
consensusID : consensus_9949#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 931 fasta sequence
[ACGTCATCCGTTACTTCCCCACCCAGGCCCTGAACTTCGCTTTCCGTGACAAGTTCAAGGCCATGTGCGGCTACAAGAAGGACAAGGACGGCTACGCCAAGTGGATGGCTGGTAACCTGGCCTCCGGTGGTGCCGCTGGTGCCACTTCGCTCCTCTTCGTCTACTCCCTCGACTACGCCCGTACCCGTCTGGCCAACGACGCCAAGTCGGCCAAGGGTGGCGGTGACCGTCAGTTCAACGGTCTCGTCGACGTCTACCGCAAGACTCTCGCCTCTGACGGTATTGCCGGTCTGTACCGTGGTTTCGGTCCTTCCGTCGCCGGTATCGTCGTCTACCGTGGTCTGTACTTCGGCATGTACGACTCCATCAAGCCTGTCCTCCTGACTGGCTCGCTTGAGACCAACTTCTTCGCCTCGTTCGCCCTCGGTTGGTGCGTCACCACCGGTGCCGGTATCGCCTCTTACCCCTTGACACTGTCCGTCGTCGTATGATGATGACCTCTGGTGAAGCCCGCAGTACAGCAGCTCTTTTCAACGCTTCAAGCAGAATGCGCCAAAGAAGGTGTCAGATCCTCCTCTCGGGTGCCAGTGCAACATTCTCTCGGGAGTCNCCGGTCTTGGTGGCTGTCAATCTACCACAACTTCACTTATTATGTTGGCAGGCCTTAAGGTGGACGCGTAAGCCTTACCTTGTGTGCTGGGAAGAGAGAGTTGCCATAATTACCGCTATGGGGAGCCACCACACAGTGGGTGGGAAAAATACATGGGCTCACTCCTCCCTCCAAATAGAAAATTTTCACTAGAGGTGACTATAAACGATTTATTCATCCCCATCACCCGTATAATATCATAATTGTTTGTGCCTTCACATGCTGTATTTCGTGTTACGGTGTATTAATTAAAAAATATAGGGCGTTCTCCTTCTAATTAAG]
[+] EMBL AW155528 [ACGTCATCCGTTACTTCCCCACCCAGGCCCTGAACTTCGCTTTCCGTGACAAGTTCAAGGCCATGTGCGGCTACAAGAAGGACAAGGACGGCTACGCCAAGTGGATGGCTGGTAACCTGGCCTCCGGTGGTGCCGCTGGTGCCACTTCGCTCCTCTTCGTCTACTCCCTCGACTACGCCCGTACCCGTCTGGCCAACGACGCCAAGTCGGCCAAGGGTGGCGGTGACCGTCAGTTCAACGGTCTCGTCGACGTCTACCGCAAGACTCTCGCCTCTGACGGTATTGCCGGTCTGTACCGTGGTTTCGGTCCTTCCGTCGCCGGTATCGTCGTCTACCGTGGTCTGTACTTCGGCATGTACGACTCCATCAAGCCTGTCCTCCTGACTGGCTCGCTTGAGACCAACTTCTTCGCCTCGTTCGCCCTCGGTTGGTGCGTCACCACCGGTGCCGGTATCGCCTCTTACCCCTTGACACTGTCCGTCGTCGTATGATGATGACCTCTGGTGAAGCCCGCAGTACAGCAGCTCTTTTCAACGCTTCAAGCAGAATGCGCCAAAGAAGGTGTCAGATCCTCCTCTCGGGTGCCAGTGCAACATTCTCTCGGGAGTCNCCGGTCTTGGTGGCTGTCAATCTACCACAACTTCACTTATTATGTTGGCAGGCCTTAAGGTGGACGCGTAAGCCTTACCTTGTGTGCTGGGAAGAGAGAGTTGCCATAATTACCGCTATGGGGAGCCACCACACAGTGGGTGGGAAAAATACATGGGCTCACTCCTCCCTCCAAATAGAAAATTTTCACTAGAGGTGACTATAAACGATTTATTCATCCCCATCACCCGTATAATATCATAATTGTTTGTGCCTTCACATGCTGTATTTCGTGTTACGGTGTATTAATTAAAAAATATAGGGCGTTCTCCTTCTAATTAAG]
consensusID : consensus_9949#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 925 fasta sequence
[ACGTCATCCGTTACTTCCCCACCCAGGCCCTGAACTTCGCTTTCCGTGACAAGTTCAAGGCCATGTTCGGCTACAAGAAGGACAAGGACGGCTACGCCAAGTGGATGGCTGGTAACCTGGCCTCCGGTGGTGCCGCTGGTGCCACTTCGCTCCTCTTCGTCTACTCCCTCGACTACGCCCGTACCCGTCTGGCCAACGACGCCAAGTCGGCCAAGGGTGGCGGTGACCGTCAGTTCAACGGTCTCGTCGACGTCTACCGCAAGACTCTCGCCTCTGACGGTATTGCCGGTCTGTACCGTGGTTTCGGTCCTTCCGTCGCCGGTATCGTCGTCTACCGTGGTCTGTACTTCGGCATGTACGACTCCATCAAGCCTGTCCTCCTGACTGGCTCGCTNGAGACCAACTTCTTCGCCTCGTTCGCCCTCGGTTGGTGCGTCACCACCGGTGCCGGTATCGCCTCTTACCCCCTTGACACTGTCCGTCGTCGTATGATGATGACCTCTGGTGAGGCCGCAAGTACAGCAGCTCTTTCGACGCCTTCAAGCAGATCGTCGCCAAAGGAGGGTGCANGTCGCTCTTNCGTGGTGCCGTGCAAACATTCTCGCGTGTCGCGGTTCTGTGTGCTGCATCTAAACCCACTCACTCATATGTTCGCAGGCCTCAAGGTGACGGCTAATGCCTACCTTGTCTGTGNGAAGAGCGTGTGTCATATCTTCCCGTGATGGTGCAACAACACGGGGTGTGTGAAAAGACTGAGTCGATCTACCCTGAATAACCATTTCTAACGGAATCGGGAAAGACGTTGATACCCCGCTTATCTATATATAATAATTTATTATATTACTTATTTTCTGTTTACTGCGCTGTTGAGATGATGTAAATAAGAAAAGAGCAGCNGAGTAATATATTTTAACAATAGAGATCT]
[+] EMBL AW155519 [ACGTCATCCGTTACTTCCCCACCCAGGCCCTGAACTTCGCTTTCCGTGACAAGTTCAAGGCCATGTTCGGCTACAAGAAGGACAAGGACGGCTACGCCAAGTGGATGGCTGGTAACCTGGCCTCCGGTGGTGCCGCTGGTGCCACTTCGCTCCTCTTCGTCTACTCCCTCGACTACGCCCGTACCCGTCTGGCCAACGACGCCAAGTCGGCCAAGGGTGGCGGTGACCGTCAGTTCAACGGTCTCGTCGACGTCTACCGCAAGACTCTCGCCTCTGACGGTATTGCCGGTCTGTACCGTGGTTTCGGTCCTTCCGTCGCCGGTATCGTCGTCTACCGTGGTCTGTACTTCGGCATGTACGACTCCATCAAGCCTGTCCTCCTGACTGGCTCGCTNGAGACCAACTTCTTCGCCTCGTTCGCCCTCGGTTGGTGCGTCACCACCGGTGCCGGTATCGCCTCTTACCCCCTTGACACTGTCCGTCGTCGTATGATGATGACCTCTGGTGAGGCCGCAAGTACAGCAGCTCTTTCGACGCCTTCAAGCAGATCGTCGCCAAAGGAGGGTGCANGTCGCTCTTNCGTGGTGCCGTGCAAACATTCTCGCGTGTCGCGGTTCTGTGTGCTGCATCTAAACCCACTCACTCATATGTTCGCAGGCCTCAAGGTGACGGCTAATGCCTACCTTGTCTGTGNGAAGAGCGTGTGTCATATCTTCCCGTGATGGTGCAACAACACGGGGTGTGTGAAAAGACTGAGTCGATCTACCCTGAATAACCATTTCTAACGGAATCGGGAAAGACGTTGATACCCCGCTTATCTATATATAATAATTTATTATATTACTTATTTTCTGTTTACTGCGCTGTTGAGATGATGTAAATAAGAAAAGAGCAGCNGAGTAATATATTTTAACAATAGAGATCT]
consensusID : consensus_9949#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 642 fasta sequence
[ACGTCATCCGTTACTTCCCCACCCAGGCCCTGAACTTGGGTTTCCGTGACAAGTTCAAGGCCATGTTCGGCTACAAGAAGGACAAGGACGGCTACGCCAAGTGGATGGCTGGTAACCTGGCCTCCGGTGGTGCCGCTGGTGCCACTTCGCTCCTCTTCGTCTACTCCCTCGACTACGCCCGTACCCGTCTGGCCAACGACGCCAAGTCGGCCAAGGGTGGCGGTGACCGTCAGTTCAACGGTCTCGTCGACGTCTACCGCAAGACTCTCGCCTCTGACGGTATTGCCGGTCTGTACCGTGGTTTCGGTCCTTCCGTCGCCGGTATCGTCGTCTACCGTGGTCTGTACTTCGGCATGTACGACTCCATCAAGCCTGTCCTCCTGACTGGCTCGCTTGAGACCAACTTCTTCGCCTCGATCGCCCTCGGTTGGTGCGGTACCACACGGAGGCGGGATTTCGCTTTTACACCCCTTAACACTTGCCGTATTCGAATGATGATGGACCTCTGGTGAGGGCCGCAAAGTACAAGCAGCTCTTTAGACGCCCTTCAACCAGAATCGTCTACAAGGAAGAGTGTAAGGTACCTCTTCCGTGGTGCCGGTGCCAACATTTTTCTATGCGGCCGGAGCTGGGGTGTTTATA]
[+] EMBL AW155345 [ACGTCATCCGTTACTTCCCCACCCAGGCCCTGAACTTGGGTTTCCGTGACAAGTTCAAGGCCATGTTCGGCTACAAGAAGGACAAGGACGGCTACGCCAAGTGGATGGCTGGTAACCTGGCCTCCGGTGGTGCCGCTGGTGCCACTTCGCTCCTCTTCGTCTACTCCCTCGACTACGCCCGTACCCGTCTGGCCAACGACGCCAAGTCGGCCAAGGGTGGCGGTGACCGTCAGTTCAACGGTCTCGTCGACGTCTACCGCAAGACTCTCGCCTCTGACGGTATTGCCGGTCTGTACCGTGGTTTCGGTCCTTCCGTCGCCGGTATCGTCGTCTACCGTGGTCTGTACTTCGGCATGTACGACTCCATCAAGCCTGTCCTCCTGACTGGCTCGCTTGAGACCAACTTCTTCGCCTCGATCGCCCTCGGTTGGTGCGGTACCACACGGAGGCGGGATTTCGCTTTTACACCCCTTAACACTTGCCGTATTCGAATGATGATGGACCTCTGGTGAGGGCCGCAAAGTACAAGCAGCTCTTTAGACGCCCTTCAACCAGAATCGTCTACAAGGAAGAGTGTAAGGTACCTCTTCCGTGGTGCCGGTGCCAACATTTTTCTATGCGGCCGGAGCTGGGGTGTTTATA]
consensusID : consensus_9949#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 587 fasta sequence
[TCTATGCTTTTCGTCTACTCTCTTGACTACGCCCGTACTCGTCTTGCCAACGACTCCAAGAACGCTAAGACTGGTGGTGACCGTCAGTTCAACGGTCTCATTGACGTCTACCGCAAGACCCTCGCCTCTGACGGTATTGCCGGTCTCTACCGTGGTTTCATGCCCTCCGTTGCCGGTATCATTGTCTACCGTGGTCTCTACTTCGGCATGTACGACTCCTTCAAGCCCGTCCTGCTTGTCGGTCCCCTCGCCGATAACTTCCTTGCCTCTTTCATGCTCGGTTGGTGCGTCACCACCGGTGCCGGTATCGCTGCCTACCCTCTTGACACCATCCGTCGTCGCATGATGATGACCTCTGGTGAGGCCGTCAAGTACAAGAACTCTTTCGATGCTGCCCGCCAGATCATTGCCACCTCCGGTGTCAAGTCCCTCTTNCACGGTGCCGGTGCCAACATCCTCCGTGGTGTTGCCGGTGCTGGTGTCCTTTCCATCTACGATCAGCTCCAGCTTCTCCTCTTCGGAAAGGCCTTCNAGGGCGCTTAAATGCCATCACCCAACTTTCATGGCCTGTATAGATTCTTTCTGTT]
[+] EMBL CA998016 [TCTATGCTTTTCGTCTACTCTCTTGACTACGCCCGTACTCGTCTTGCCAACGACTCCAAGAACGCTAAGACTGGTGGTGACCGTCAGTTCAACGGTCTCATTGACGTCTACCGCAAGACCCTCGCCTCTGACGGTATTGCCGGTCTCTACCGTGGTTTCATGCCCTCCGTTGCCGGTATCATTGTCTACCGTGGTCTCTACTTCGGCATGTACGACTCCTTCAAGCCCGTCCTGCTTGTCGGTCCCCTCGCCGATAACTTCCTTGCCTCTTTCATGCTCGGTTGGTGCGTCACCACCGGTGCCGGTATCGCTGCCTACCCTCTTGACACCATCCGTCGTCGCATGATGATGACCTCTGGTGAGGCCGTCAAGTACAAGAACTCTTTCGATGCTGCCCGCCAGATCATTGCCACCTCCGGTGTCAAGTCCCTCTTNCACGGTGCCGGTGCCAACATCCTCCGTGGTGTTGCCGGTGCTGGTGTCCTTTCCATCTACGATCAGCTCCAGCTTCTCCTCTTCGGAAAGGCCTTCNAGGGCGCTTAAATGCCATCACCCAACTTTCATGGCCTGTATAGATTCTTTCTGTT]
[+] EMBL BU099187 [TCTATGCTTTTCGTCTACTCTCTTGACTACGCCCGTACTCGTCTTGCCAACGACTCCAAGAACGCTAAGACTGGTGGTGACCGTCAGTTCAACGGTCTCATTGACGTCTACCGCAAGACCCTCGCCTCTGACGGTATTGCCGGTCTCTACCGTGGTTTCATGCCCTCCGTTGCCGGTATCATTGTCTACCGTGGTCTCTACTTCGGCATGTACGACTCCTTCAAGCCCGTCCTGCTTGTCGGTCCCCTCGCCGATAACTTCCTTGCCTCTTTCATGCTCGGTTGGTGCGTCACCACCGGTGCCGGTATCGCTGCCTACCCTCTTGACACCATCCGTCGTCGCATGATGATGACCTCTGGTGAGGC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9949#2 ------------------------------------------------------------
consensus_9949#3 ------------------------------------------------------------
consensus_9949#4 ------------------------------------------------------------
consensus_9949#1 -----------------------CCACCTCTCTTTCGTAGTACAGTCAAAATGGGTACCG 37
consensus_9949#5 ------------------------------------------------------------
consensus_9949#0 CTTTTTTTTTGTTGTCGCATCCATCTTTTGCACAACCTTTCACAATGGCTCAAGGTGAAG 60
consensus_9949#2 ------------------------------------------------------------
consensus_9949#3 ------------------------------------------------------------
consensus_9949#4 ------------------------------------------------------------
consensus_9949#1 TCGCTGACCCCGCCAAGACCAAGAAGACCATGAGTGGCTTCGCCACCGACTTCCTCATGG 97
consensus_9949#5 ------------------------------------------------------------
consensus_9949#0 TTAACCAGGGCGAGAAGTCCGTCCTCGGCATGCCCGGCTTCGTTGTCGACTTCCTGATGG 120
consensus_9949#2 ------------------------------------------------------------
consensus_9949#3 ------------------------------------------------------------
consensus_9949#4 ------------------------------------------------------------
consensus_9949#1 GTGGTGTTTCCGCCGCCGTCTCCAAGACGGCTGCTGCCCCCATTGAGCGAATCAAGCTCC 157
consensus_9949#5 ------------------------------------------------------------
consensus_9949#0 GTGGTGTTTCCGCCGCTGTCTCCAAGACCGCTGCTGCCCCCATTGAGCGTATCAAGCTCC 180
consensus_9949#2 ------------------------------------------------------------
consensus_9949#3 ------------------------------------------------------------
consensus_9949#4 ------------------------------------------------------------
consensus_9949#1 TCATCCAGAACCAGGACGAGATGATCAAGCAGGGCCGTCTTGCCGCCCCCTACAAGGGCA 217
consensus_9949#5 ------------------------------------------------------------
consensus_9949#0 TGATCCAGAACCAGGACGAGATGCTCAAG-GCTGTCGTCTTTCCCACAAGTACAACGGTC 239
consensus_9949#2 ------------------------------------------------------------
consensus_9949#3 ------------------------------------------------------------
consensus_9949#4 ------------------------------------------------------------
consensus_9949#1 TTGGCGACTGCTTCGTCCGCACCTACCAGCAGGAGGGCATGGTTTCGCTCTGGCGTGGTA 277
consensus_9949#5 ------------------------------------------------------------
consensus_9949#0 TCGCCGACTGCTTCAAGCGTACTGCCGCTGATGAGGGTATCGTCTCTCTGTGGCGTGGTA 299
consensus_9949#2 ---------ACGTCATCCGTTACTTCCCCACCCAGGCCCTGAACTTCGCTTTCCGTGACA 51
consensus_9949#3 ---------ACGTCATCCGTTACTTCCCCACCCAGGCCCTGAACTTCGCTTTCCGTGACA 51
consensus_9949#4 ---------ACGTCATCCGTTACTTCCCCACCCAGGCCCTGAACTTGGGTTTCCGTGACA 51
consensus_9949#1 ACACCGCTAACGTCATCCGTTACTTCCCCACCCAGGCGCTCAACTTCGCCTTCAAGGACT 337
consensus_9949#5 ------------------------------------------------------------
consensus_9949#0 ACACCGCCAACGTCATCCGTTACTTCCCTACCCAGGCCCTGAACTTCGCTTTCCGCGACA 359
consensus_9949#2 AGTTCAAGGCCATGTGCGGCTACAAGAAGGACAAGGACGGCTACGCCAAGTGGATGGCTG 111
consensus_9949#3 AGTTCAAGGCCATGTTCGGCTACAAGAAGGACAAGGACGGCTACGCCAAGTGGATGGCTG 111
consensus_9949#4 AGTTCAAGGCCATGTTCGGCTACAAGAAGGACAAGGACGGCTACGCCAAGTGGATGGCTG 111
consensus_9949#1 TCTTCAAGTCGCTCTTCGCCGTCCCCAAGAC---CGCTCCCTACTGGAAGTCGCTCACGG 394
consensus_9949#5 ------------------------------------------------------------
consensus_9949#0 CCTACAAGTCCATGTTCGCCTACAAGAAGGAGCGTGATGGATACGCCAAGTGGATGATGG 419
consensus_9949#2 GTAACCTGGCCTCCGGTGGTGCCGCTGGTGCCACTTCGCTCCTCTTCGTCTACTCCCTCG 171
consensus_9949#3 GTAACCTGGCCTCCGGTGGTGCCGCTGGTGCCACTTCGCTCCTCTTCGTCTACTCCCTCG 171
consensus_9949#4 GTAACCTGGCCTCCGGTGGTGCCGCTGGTGCCACTTCGCTCCTCTTCGTCTACTCCCTCG 171
consensus_9949#1 CCAACCTTGCCTCCGGTGGTGCCGCCGGTGCCTCGTCGCTCCTCTTCGTCTACTCGCTCG 454
consensus_9949#5 -----------------------------------TCTATGCTTTTCGTCTACTCTCTTG 25
consensus_9949#0 GTAACCTGGCCTCCGGTGGTGCTGCCGGTGCCACTTCCCTGCTTTTCGTCTACTCCCTGG 479
** * ** *********** ** *
consensus_9949#2 ACTACGCCCGTACCCGTCTGGCCAACGACGCCAAGT---CGGCCAAGGGTGGCGGTGACC 228
consensus_9949#3 ACTACGCCCGTACCCGTCTGGCCAACGACGCCAAGT---CGGCCAAGGGTGGCGGTGACC 228
consensus_9949#4 ACTACGCCCGTACCCGTCTGGCCAACGACGCCAAGT---CGGCCAAGGGTGGCGGTGACC 228
consensus_9949#1 ACTACGCCCGTACCCGTCTTGCCAACGACGCCAAGTCGGCTGCCAAGGGCGGAGGAGACC 514
consensus_9949#5 ACTACGCCCGTACTCGTCTTGCCAACGACTCCAAG---AACGCTAAGACTGGTGGTGACC 82
consensus_9949#0 ACTACGCCCGTACCCGTCTGGCCAACGACGCTAAGT---CCACCAAGGGTGGCGGTGACC 536
************* ***** ********* * *** * *** ** ** ****
consensus_9949#2 GTCAGTTCAACGGTCTCGTCGACGTCTACCGCAAGACTCTCGCCTCTGACGGTATTGCCG 288
consensus_9949#3 GTCAGTTCAACGGTCTCGTCGACGTCTACCGCAAGACTCTCGCCTCTGACGGTATTGCCG 288
consensus_9949#4 GTCAGTTCAACGGTCTCGTCGACGTCTACCGCAAGACTCTCGCCTCTGACGGTATTGCCG 288
consensus_9949#1 GCCAGTTCAACGGCCTCGTCGACGTCTACCGCAAGACCATTGCCTCGGACGGTGTCGCCG 574
consensus_9949#5 GTCAGTTCAACGGTCTCATTGACGTCTACCGCAAGACCCTCGCCTCTGACGGTATTGCCG 142
consensus_9949#0 GTCAGTTCAACGGTCTCGTTGACGTCTACCGCAAGACCCTCGCCTCCGACGGTATTGCCG 596
* *********** *** * ***************** * ***** ****** * ****
consensus_9949#2 GTCTGTACCGTGGTTTCGGTCCTTCCGTCGCCGGTATCGTCGTCTACCGTGGTCTGTACT 348
consensus_9949#3 GTCTGTACCGTGGTTTCGGTCCTTCCGTCGCCGGTATCGTCGTCTACCGTGGTCTGTACT 348
consensus_9949#4 GTCTGTACCGTGGTTTCGGTCCTTCCGTCGCCGGTATCGTCGTCTACCGTGGTCTGTACT 348
consensus_9949#1 GTCTCTACCGTGGCTTCGTCCCCTCGGTCGTCGGTATCGTCGTCTACCGCGGTCTCTACT 634
consensus_9949#5 GTCTCTACCGTGGTTTCATGCCCTCCGTTGCCGGTATCATTGTCTACCGTGGTCTCTACT 202
consensus_9949#0 GTCTCTACCGTGGTTTCGGTCCCTCCGTCGTCGGTATCGTCGTCTACCGTGGTCTGTACT 656
**** ******** *** ** ** ** * ******* * ******** ***** ****
consensus_9949#2 TCGGCATGTACGACTCCATCAAGCCTGTCCTCCTGACTGGCTCGCTTGAGACCAACTTCT 408
consensus_9949#3 TCGGCATGTACGACTCCATCAAGCCTGTCCTCCTGACTGGCTCGCTNGAGACCAACTTCT 408
consensus_9949#4 TCGGCATGTACGACTCCATCAAGCCTGTCCTCCTGACTGGCTCGCTTGAGACCAACTTCT 408
consensus_9949#1 TCGGCATGTACGACTCGCTCAAGCCCGTCCTGCTCACCGGCAACCTCTCGAACAACTTCC 694
consensus_9949#5 TCGGCATGTACGACTCCTTCAAGCCCGTCCTGCTTGTCGGTCCCCTCGCCGATAACTTCC 262
consensus_9949#0 TCGGTATGTACGACTCTATCAAGCCCGTTCTCCTGGTCGGTCCTCTTGAGGGCTCTTTCC 716
**** *********** ******* ** ** ** ** ** ***
consensus_9949#2 TCGCCTCGTTCGCCCTCGGTTGGTGCGTCACCAC-CGGTGCCGGTATCGC-CTCTTAC-C 465
consensus_9949#3 TCGCCTCGTTCGCCCTCGGTTGGTGCGTCACCAC-CGGTGCCGGTATCGC-CTCTTAC-C 465
consensus_9949#4 TCGCCTCGATCGCCCTCGGTTGGTGCGGTACCACACGGAGGCGGGATTTCGCTTTTACAC 468
consensus_9949#1 TCGCCTCGTTCCTCCTCGGCTGGGGTGTTACCAC-CGGTGCTGGTCTTGC-TTCCTAC-C 751
consensus_9949#5 TTGCCTCTTTCATGCTCGGTTGGTGCGTCACCAC-CGGTGCCGGTATCGC-TGCCTAC-C 319
consensus_9949#0 TCGCTTCCTTCCTGCTCGGCTGGACTGTTACCAC-TGCTGCTGGTGTTGC-TTCCTAC-C 773
* ** ** ** ***** *** * ***** * * ** * * *** *
consensus_9949#2 CC-TTGACACTGTCCGTCGTCGTATGATGATG-ACCTCTGGTGAAGCCCGCA--GTACA- 520
consensus_9949#3 CCCTTGACACTGTCCGTCGTCGTATGATGATG-ACCTCTGGTGAGGCCGCAA--GTACA- 521
consensus_9949#4 CCCTTAACACTTGCCGTATTCGAATGATGATGGACCTCTGGTGAGGGCCGCAAAGTACAA 528
consensus_9949#1 CTCTCGACACCATCCGTCGTCGCATGATGATG-ACCTCGGGTGGCAAGGTTCA-CTACA- 808
consensus_9949#5 CTCTTGACACCATCCGTCGTCGCATGATGATG-ACCTCTGGTGAGGCCGTCAA-GTACA- 376
consensus_9949#0 CTCTGGACACTATCCGTCGTCGTATGATGATG-ACCTCCGGTGAGGCCGTCAA-GTACT- 830
* * **** **** *** ********* ***** **** ***
consensus_9949#2 GCAGCTCTTTTCAACGC-TTCAAGCAGAAT-G-CGCCAAAGAAGGTGTCA-GATCCTCCT 576
consensus_9949#3 GCAGCTCTTTCGACGCC-TTCAAGCAGATC-GTCGCCAAAGGAGGGTGCA-NGTCGCTCT 578
consensus_9949#4 GCAGCTCTTTAGACGCCCTTCAACCAGAATCGTCTACAAGGAAGAGTGTAAGGTACCTCT 588
consensus_9949#1 AGAACATGTTCGATGCCGGTC--GCTCCATCGTCGCCGCCGAGGGTGTCT-CGTCGCTCT 865
consensus_9949#5 AGAACTCTTTCGATGCTGCCC--GCCAGATCATTGCCACCTCCGGTGTCA-AGTCCCTCT 433
consensus_9949#0 CCTCCTCCATGGATGCTGCCC--GCCAGATCATCGCCAAGGAGGGTACCA-AGTCCCTGT 887
* * * * * * * * *
consensus_9949#2 CTCG-GGTGCCAGTGC-AACATTCTCTCGGGAGTCNCCGGTCTTGGTG-GCTGTCAATCT 633
consensus_9949#3 TNCGTGGTGCC-GTGC-AA-ACATTCTCGCGTGTCGC-GGTTCTGTGT-GCTGC--ATCT 631
consensus_9949#4 TCCGTGGTGCCGGTGC-CA-ACATTTTTCTATGCGGCCGGAGCTGGGG-TGTTTATA--- 642
consensus_9949#1 TCAAGGGTGCCGGTGCCAACATTCTCCGTGGTATCGCCGGTGCCGGTGTGCTCTCCGGTT 925
consensus_9949#5 TNCACGGTGCCGGTGCCAACATCCTCCGTGGTGTTGCCGGTGCTGGTGTCCTTTCCATCT 493
consensus_9949#0 TCAAGGGTGCCGGTGCCAACATCCTCCGTGGTGTTGCCGGTGCTGGTGTCCTGTCCATCT 947
****** **** * * * * ** * *
consensus_9949#2 ACCACAA-CTTCA-CTTATTATGTTGGC--AGGCCTTAAGGTGGACGCGTAAGCCTTACC 689
consensus_9949#3 AAACCCA-CT-CA-CTCAT-ATGTTCGC--AGGCCTCAAGGTG-ACGGCTAATGCCTACC 684
consensus_9949#4 ------------------------------------------------------------
consensus_9949#1 ACGACAAGCTCCAGGAGGTCATGTTCGGCAAGGTCTACAAG--GGCGGCTCCGGTTAAAC 983
consensus_9949#5 ACGATCAGCTCCAGCTTCTCCTCTTCGGAAAGGCCTTCNAG--GGCGC------TTAAAT 545
consensus_9949#0 ACGATCAGGTCCAGCTGATCCTCTTCGGCAAGAAGTTCAAATAGATAACTCGCCCCTAGC 1007
consensus_9949#2 TTGTGTGCTGGGAAGAGAGAGTTGCCATAA-TTACCGCTATGGGGAGCCACCACACAGTG 748
consensus_9949#3 TTGTCTG-TGNGAAGAGCGTGT-GTCATATCTTCCCGTGATGGTGCAACAACACGGGGTG 742
consensus_9949#4 ------------------------------------------------------------
consensus_9949#1 G-GTCCCCTGCGTACTCTTCGCTCCTCC------TCCCCCTCCC-TTCTGTGCAGTCGGC 1035
consensus_9949#5 G---CCATCACCCAACTTTCATGGCCTG------TATAGATTCT-TTCTGTT-------- 587
consensus_9949#0 G-AATTATCTAACACCTGTAGCTATACTGG-GGATGGGGATGATACCCTGCCCGGTATGA 1065
consensus_9949#2 GGTGGGAAAAATACATGGGCTCACTCCTCCCT-CCAAATAGAAAATTTTCACTAGAGGTG 807
consensus_9949#3 TGTGAAAAGACTGAGTCGATCTACCCTGAATAACCATTTCTAACGGAATCGGGAAAGACG 802
consensus_9949#4 ------------------------------------------------------------
consensus_9949#1 CCGGCCCATTCCCCGATGCCGGTCTTCATGGAATGAAAACTCAGCT-------------- 1081
consensus_9949#5 ------------------------------------------------------------
consensus_9949#0 CCGGGTGATGGGGAAGCAGAGGATGTGGGAAGTGCAAAAGATAGATGCGTCAAGAAATGG 1125
consensus_9949#2 ACTATAAACGATTTATTCATCCCCATCACCCGTATAATATCATAATTGTTTGTGCCTTCA 867
consensus_9949#3 TTGATACCCCGCTTATCTATATATAATA---ATTTATTATATTACTTATTTTCTGTTTAC 859
consensus_9949#4 ------------------------------------------------------------
consensus_9949#1 ------------------------------------------------------------
consensus_9949#5 ------------------------------------------------------------
consensus_9949#0 GTTCGGGGGGATCTTGAAGCATAGAATGGTGTGATTCTTCCCTTTTTGTACCCGATGTAC 1185
consensus_9949#2 CATGCTGTATTTCGTGTTACGGTGTATTAATTAAAAAATATAGGGCGTTCTCCTTC--TA 925
consensus_9949#3 TGCGCTGT----TGAGATGATGTAAATAAGAAAAGAGCAGCNGAGTAATATATTTTAACA 915
consensus_9949#4 ------------------------------------------------------------
consensus_9949#1 ------------------------------------------------------------
consensus_9949#5 ------------------------------------------------------------
consensus_9949#0 TTTACTGCCTGCAAACTCTTTTTCTTTT-------------------------------- 1213
consensus_9949#2 ATTAAG---- 931
consensus_9949#3 ATAGAGATCT 925
consensus_9949#4 ----------
consensus_9949#1 ----------
consensus_9949#5 ----------
consensus_9949#0 ----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||