|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9952#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2619 fasta sequence
[CCCCCAAGCATTTTTGCAAAACTTGTTTGGAACTTTGGCCACCGCCGCCGGCGCCGCGACGCGACGACGGGAAGGCGCCGGCCGCCGGCGGCCAGCGGCGCTGGCGGTGAAGCCGATCGAGGAGGCGTCCTCCACCGCTCGGCGACCAACCGCCGACGGCGACGGCGATGGCGACAGCGCGCACCATGCAGGGGGCCCCACTCTGTTTACTCCCCCGCGTCCGCGACCGCGAAGTCTCCGGTCTCCGCCGCGCCCGCGTCGCCTCGCCCTGACCACCACCAGTCCACCGCCGCGGCCCACACGGCACAGCCTCTCACAAGGGAGGAAGGGGGAAGTGAGCCCCCGCGCCACGGCCACGCGCCGCGGGCTTCCTCCTCCTCCTCCTCCTCCTCCTCCCCGAGCCGCACGCCGATCGATGGCCGCGCGGCGGCGCCTCCTCCTGCTCCTCGTCCTCCTGCTGTGCCGCCTCGCCGCCGTCCTCCCCACCTCCGAAGTGGAGGCCTTGCAGGGTTTCATGGCAGGGTTCGCCGGCGGCAACGCGGCGTTCCAGAGCTGGGACGCGTCCGCGCCCAACCCTTGCACCTGGTTCCATGTCACCTGTGGCCCGGGGAACCAGGTCATCAGGCTGGATCTCGGGAACCAGTCGCTGTCCGGCGAGTTGAAGCCCGACATTTGGCAGCTGCAAGCATTGCAATCCCTGGAACTTTATGGCAATAGCATCAGCGGGAAAATACCTAGCGAGCTTGGGCGGTTAGCTAGCTTGCAAACTTTGGATCTCTACTTGAACAATTTCACCGGTGAAATACCGAATGAACTGGGAAATTTATCGAAGCTCAGTAACCTCCGTCTGAACAACAATAGTCTGTCAGGTGCAATTCCCATGTCATTGACAACAATCCAAAATCTTGAAGTGCTGGACTTGTCACATAACAACTTGTCGGGAATAATACCGACCAATGGTTCATTTTCACACTTCACCCCAATCAGTTTCTCCAATAACCCACGTACTTTCGCAAATTCTTCTGATTCGCCATCAAATAACTCGGGAGCAGCGGTGCCATCAGGAAGAAGTAGTGCATCCAGCATTGGAACAATTGCTGGTGGAGCTGCTGCAGGTGCTGCCATGTTGTTTGCTGCTCCTATTGTATTGTTCGCATGGTGGTGGCGGCGTAAACCACATGACCAATTCTTTGACCTACTAGAAGAAGAAACTCCAGAAGTTCATCTGGGTCAGCTTAGAAGGTTCACACTGAGAGAACTGCAGGTGGCAACAGATAACTTCAGTCAAACTAATTTGCTAGGGAGAGGAGGCTTTGGAAAGGTCTATAAAGGAAGGTTGTTAGATGGTTCATTGATAGCAATAAAAAGACTAAATGAAGATCGAATTGGAACTGGAGAGCGGCAGTTCCTAATGGAAGTCGAGATCATCAGCATGGCCGTGCATCAAAATCTCCTACGCCTCCAGGGGTATTGTATGACACCCACCGAGCGGCTGCTTGTGTATCCTTACATGGAGAATAAAAGCCTTGAGACACGCTTACGAGAGTGCTCTGATTCACAACAACCACTTGACTGGCCAACACGAAGAAAAATCGCGTTAGGGTCTGCAAGAGGGATCTCTTACTTGCATGAAGGATGTGATCCCAAAATTATCCATCGAGATGTCAAAGCTGCTAACATTTTGTTGGATGAAAAACTTGAAGCAGTTGTTGGTGATTTCGGTCTGGCTAGAATTATGGATTACAAAGTTTCCCATGTTGTAACCGGCGTGATGGGGACATTGGGGCACATTCCCATGGAGTACCTGACTGCAGGAAGAACTTCAGATAAAACTGATGTTTTTGGGTATGGAATCATGCTTTTTGAACTGATTAGTGGGAAAAGGGGATTTGATCTTGTTGGTCTTGCAAATGAAGAAAATGCCAGAGTGCATGATTGGGTGAAGAAACTGCTGGAAGAGGACAGGCTGGAGGTGCTGATTGACCCA-AACTTACTGGAAATCTACAATGGTGGGGAACAGGGAGTGCGAGAGGAGATGAGGTTGCTGGTGCAGATTGCGCTGCTCTGCACCCAGGAGTCCGCTCCAAGCCGCCCCAGAATGTCAACGGTGGTGACAATGCTAG-AAGACGGTATCGCGGAGCACTGGGATGCATGGCAAAGGAAGACGATTGTGCAGGCAAGCCTGCAAGGAGGACAGGGCGTTTCTGAGGCTCGCAATGACTCTGTTGCAAATCTCCCTCCAGACACATTGTCTGGTCCAAGGTGACTGCCACCTTAAGGACTATGAAGGGTGG---TTCTTTTGTAGAGCTTAGTGAACTTAGACAGAACACTTGCCATTCTTAAAAAAACAGCAGATTATATGTTTTCTTGTAGCATGTGTATGTATTTTAGTTTTTCCCCTTTTTTT-CAAGTAATTCATAATCACTACTAGACACAGGGCTTTCAGAAACTGTTCAGAAACCACATCATAGTTATGCTAACGCATCAATACATGTGGTTGTGCTACTCCAGGATCATCAAAGGCGGTTATTTAACCCTCTCTGAAAAAAAAACATAACTAGAGATGGCTCGAAGGTGAGCTGTAACCTATTGCCAGAGATATATCAATTTTGAATCAAA]
[+] EMBL AK100258 [CCCCCAAGCATTTTTGCAAAACTTGTTTGGAACTTTGGCCACCGCCGCCGGCGCCGCGACGCGACGACGGGAAGGCGCCGGCCGCCGGCGGCCAGCGGCGCTGGCGGTGAAGCCGATCGAGGAGGCGTCCTCCACCGCTCGGCGACCAACCGCCGACGGCGACGGCGATGGCGACAGCGCGCACCATGCAGGGGGCCCCACTCTGTTTACTCCCCCGCGTCCGCGACCGCGAAGTCTCCGGTCTCCGCCGCGCCCGCGTCGCCTCGCCCTGACCACCACCAGTCCACCGCCGCGGCCCACACGGCACAGCCTCTCACAAGGGAGGAAGGGGGAAGTGAGCCCCCGCGCCACGGCCACGCGCCGCGGGCTTCCTCCTCCTCCTCCTCCTCCTCCTCCCCGAGCCGCACGCCGATCGATGGCCGCGCGGCGGCGCCTCCTCCTGCTCCTCGTCCTCCTGCTGTGCCGCCTCGCCGCCGTCCTCCCCACCTCCGAAGTGGAGGCCTTGCAGGGTTTCATGGCAGGGTTCGCCGGCGGCAACGCGGCGTTCCAGAGCTGGGACGCGTCCGCGCCCAACCCTTGCACCTGGTTCCATGTCACCTGTGGCCCGGGGAACCAGGTCATCAGGCTGGATCTCGGGAACCAGTCGCTGTCCGGCGAGTTGAAGCCCGACATTTGGCAGCTGCAAGCATTGCAATCCCTGGAACTTTATGGCAATAGCATCAGCGGGAAAATACCTAGCGAGCTTGGGCGGTTAGCTAGCTTGCAAACTTTGGATCTCTACTTGAACAATTTCACCGGTGAAATACCGAATGAACTGGGAAATTTATCGAAGCTCAGTAACCTCCGTCTGAACAACAATAGTCTGTCAGGTGCAATTCCCATGTCATTGACAACAATCCAAAATCTTGAAGTGCTGGACTTGTCACATAACAACTTGTCGGGAATAATACCGACCAATGGTTCATTTTCACACTTCACCCCAATCAGTTTCTCCAATAACCCACGTACTTTCGCAAATTCTTCTGATTCGCCATCAAATAACTCGGGAGCAGCGGTGCCATCAGGAAGAAGTAGTGCATCCAGCATTGGAACAATTGCTGGTGGAGCTGCTGCAGGTGCTGCCATGTTGTTTGCTGCTCCTATTGTATTGTTCGCATGGTGGTGGCGGCGTAAACCACATGACCAATTCTTTGACCTACTAGAAGAAGAAACTCCAGAAGTTCATCTGGGTCAGCTTAGAAGGTTCACACTGAGAGAACTGCAGGTGGCAACAGATAACTTCAGTCAAACTAATTTGCTAGGGAGAGGAGGCTTTGGAAAGGTCTATAAAGGAAGGTTGTTAGATGGTTCATTGATAGCAATAAAAAGACTAAATGAAGATCGAATTGGAACTGGAGAGCGGCAGTTCCTAATGGAAGTCGAGATCATCAGCATGGCCGTGCATCAAAATCTCCTACGCCTCCAGGGGTATTGTATGACACCCACCGAGCGGCTGCTTGTGTATCCTTACATGGAGAATAAAAGCCTTGAGACACGCTTACGAGAGTGCTCTGATTCACAACAACCACTTGACTGGCCAACACGAAGAAAAATCGCGTTAGGGTCTGCAAGAGGGATCTCTTACTTGCATGAAGGATGTGATCCCAAAATTATCCATCGAGATGTCAAAGCTGCTAACATTTTGTTGGATGAAAAACTTGAAGCAGTTGTTGGTGATTTCGGTCTGGCTAGAATTATGGATTACAAAGTTTCCCATGTTGTAACCGGCGTGATGGGGACATTGGGGCACATTCCCATGGAGTACCTGACTGCAGGAAGAACTTCAGATAAAACTGATGTTTTTGGGTATGGAATCATGCTTTTTGAACTGATTAGTGGGAAAAGGGGATTTGATCTTGTTGGTCTTGCAAATGAAGAAAATGCCAGAGTGCATGATTGGGTGAAGAAACTGCTGGAAGAGGACAGGCTGGAGGTGCTGATTGACCCA AACTTACTGGAAATCTACAATGGTGGGGAACAGGGAGTGCGAGAGGAGATGAGGTTGCTGGTGCAGATTGCGCTGCTCTGCACCCAGGAGTCCGCTCCAAGCCGCCCCAGAATGTCAACGGTGGTGACAATGCTAG AAGACGGTATCGCGGAGCACTGGGATGCATGGCAAAGGAAGACGATTGTGCAGGCAAGCCTGCAAGGAGGACAGGGCGTTTCTGAGGCTCGCAATGACTCTGTTGCAAATCTCCCTCCAGACACATTGTCTGGTCCAAGGTGACTGCCACCTTAAGGACTATGAAGGGTGG TTCTTTTGTAGAGCTTAGTGAACTTAGACAGAACACTTGCCATTCTTAAAAAAACAGCAGATTATATGTTTTCTTGTAGCATGTGTATGTATTTTAGTTTTTCCCCTTTTTTT CAAGTAATTCAT ]
[+] EMBL AK065224 [ CCCCCGCGCCACGGCCACGCGCCGCGGGCTTCCTCCTCCTCCTCCTCCTCCTCCTCCCCGAGCCGCACGCCGATCGATGGCCGCGCGGCGGCGCCTCCTCCTGCTCCTCGTCCTCCTGCTGTGCCGCCTCGCCGCCGTCCTCCCCACCTCCGAAGTGGAGGCCTTGCAGGGTTTCATGGCAGGGTTCGCCGGCGGCAACGCGGCGTTCCAGAGCTGGGACGCGTCCGCGCCCAACCCTTGCACCTGGTTCCATGTCACCTGTGGCCCGGGGAACCAGGTCATCAGGCTGGATCTCGGGAACCAGTCGCTGTCCGGCGAGTTGAAGCCCGACATTTGGCAGCTGCAAGCATTGCAATCCCTGGAACTTTATGGCAATAGCATCAGCGGGAAAATACCTAGCGAGCTTGGGCGGTTAGCTAGCTTGCAAACTTTGGATCTCTACTTGAACAATTTCACCGGTGAAATACCGAATGAACTGGGAAATTTATCGAAGCTCAGTAACCTCCGTCTGAACAACAATAGTCTGTCAGGTGCAATTCCCATGTCATTGACAACAATCCAAAATCTTGAAGTGCTGGACTTGTCACATAACAACTTGTCGGGAATAATACCGACCAATGGTTCATTTTCACACTTCACCCCAATCAGTTTCTCCAATAACCCACGTACTTTCGCAAATTCTTCTGATTCGCCATCAAATAACTCGGGAGCAGCGGTGCCATCAGGAAGAAGTAGTGCATCCAGCATTGGAACAATTGCTGGTGGAGCTGCTGCAGGTGCTGCCATGTTGTTTGCTGCTCCTATTGTATTGTTCGCATGGTGGTGGCGGCGTAAACCACATGACCAATTCTTTGACCTACTAGAAGAAGAAACTCCAGAAGTTCATCTGGGTCAGCTTAGAAGGTTCACACTGAGAGAACTGCAGGTGGCAACAGATAACTTCAGTCAAACTAATTTGCTAGGGAGAGGAGGCTTTGGAAAGGTCTATAAAGGAAGGTTGTTAGATGGTTCATTGATAGCAATAAAAAGACTAAATGAAGATCGAATTGGAACTGGAGAGCGGCAGTTCCTAATGGAAGTCTAGATCATCAGCATGGCCGTGCATCAAAATCTCCTACGCCTCCAGGGGTATTGTATGACACCCACCGAGCGGCTGCTTGTGTATCCTTACATGGAGAATAAAAGCCTTGAGACACGCTTACGAGAGTGCTCTGATTCACAACAACCACTTGACTGGCCAACACGAAGAAAAATCGCGTTAGGGTCTGCAAGAGGGATCTCTTACTTGCATGAAGGATGTGATCCCAAAATTATCCATCGAGATGTCAAAGCTGCTAACATTTTGTTGGATGAAAAACTTGAAGCAGTTGTTGGTGATTTCGGTCTGGCTAGAATTATGGATTACAAAGTTTCCCATGTTGTAACCGGCGTGATGGGGACATTGGGGCACATTCCCATGGAGTACCTGACTGCAGGAAGAACTTCAGATAAAACTGATGTTTTTGGGTATGGAATCATGCTTTTTGAACTGATTAGTGGGAAAAGGGGATTTGATCTTGTTGGTCTTGCAAATGAAGAAAATGCCAGAGTGCATGATTGGGTGAAGAAACTGCTGGAAGAGGACAGGCTGGAGGTGCTGATTGACCCA AACTTACTGGAAATCTACAATGGTGGGGAACAGGGAGTGCGAGAGGAGATGAGGTTGCTGGTGCAGATTGCGCTGCTCTGCACCCAGGAGTCCGCTCCAAGCCGCCCCAGAATGTCAACGGTGGTGACAATGCTAG AAGACGGTATCGCGGAGCACTGGGATGCATGGCAAAGGAAGACGATTGTGCAGGCAAGCCTGCAAGGAGGACAGGGCGTTTCTGAGGCTCGCAATGACTCTGTTGCAAATCTCCCTCCAGACACATTGTCTGGTCCAAGGTGACTGCCACCTTAAGGACTATGAAGGGTGG TTCTTTTGTAGAGCTTAGTGAACTTAGACAGAACACTTGCCATTCTTAAAAAAACAGCAGATTATATGTTTTCTTGTAGCATGTGTATGTATTTTAGTTTTTCCCCTTTTTTT CAAGTAATTCATAATCACTACTAGACACAGGGCTTTCAGAAACTGTTCAGAAACCACATCATAGTTATGCTAACGCATCAATACATG ]
[+] EMBL CB645230 [ TCATTTTCACACTTCACCCCAATCAGTTTCTCCAATAACCCACGTACTTTCGCAAATTCTTCTGATTCGCCATCAAATAACTCGGGAGCAGCGGTGCCATCAGGAAGAAGTAGTGCATCCAGCATTGGAACAATTGCTGGTGGAGCTGCTGCAGGTGCTGCCATGTTGTTTGCTGCTCCTATTGTATTGTTCGCATGGTGGTGGCGGCGTAAACCACATGACCAATTCTTTGACCTACTAGAAGAAGAAACTCCAGAAGTTCATCTGGGTCAGCTTAGAAGGTTCACACTGAGAGAACTGCAGGTGGCAACAGATAACTTCAGTCAAACTAATTTGCTAGGGAGAGGAGGCTTTGGAAAGGTCTATAAAGGAAGGTTGTTAGATGGTTCATTGATAGCAATAAAAAGACTAAATGAAGATCGAATTGGAACTGGAGAGCGGCAGTTCCTAATGGAAGTCGAGATCATCAGCATGGCCGTGCATCAAAATCTCCTACGCCTCCAGGGGTATTGTATGACACCCACCGAGCGGCTGCTTGTGTATCCTTACATGGAGAATAAAAGCCTTGAGACACGCTTACGAGAGTGCTCTGATTCACAACAACCACTTGACTGGCCAACACGAAGAAAAATCGCGTTAGGGTCTGCAAGAGGGATCTCTTACTTGCATGAAGGATGTGATCCCAAAATTATCCATCGAGATGTCANAGCTGCTAACATTTTGTTGGATGAAAAACTTGAAGCAGTTGTTGGTGATTTCGGTCTGGCTAGAATTATGG ]
[-] EMBL CB645231 [ TGCTTTTTGAACTGATTAGTGGGAAAAGGGGATTTGATCTTGTTGGTCTTGCAAATGAAGAAAATGCCAGAGTGCATGATTGGGTGAAGAAACTGCTGGAAGAGGACAGGCTGGAGGTGCTGATTGACCCA AACTTACTGGAAATCTACAATGGTGGGGAACAGGGAGTGCGAGAGGAGATGAGGTTGCTGGTGCAGATTGCGCTGCTCTGCACCCAGGAGTCCGCTCCAAGCCGCCCCAGAATGTCAACGGTGGTGACAATGCTAG AAGACGGTATCGCGGAGCACTGGGATGCATGGCAAAGGAAGACGATTGTGCAGGCAAGCCTGCAAGGAGGACAGGGCGTTTCTGAGGCTCGCAATGACTCTGTTGCAAATCTCCCTCCAGACACATTGTCTGGTCCAAGGTGACTGCCCCCTTAAGGACTATGAAGGGTGG TTCTTTTGTAGAGCTTAGTGAACTTAGACAGAACACTTGCCATTCTTAAAAAAACAGCAGATTATATGTTTTCTTGTAGCATGTGTATGTATTTTAGTTTTTCCCCTTTTTTT CAAGTAATTCATAATCACTACTAGACACAGGGCTTTCAGAAACTGTTCAGAAACCACATCATAGTTATGCTAACGCATCAATACATGTGGTTGTGCTACTCCAGGATCATCAAAGGCGGTTATTTAACCCTCTCTGAAAAAAAAACATAACTAGAGATGGCTCGAAGGTGAGCTGTAACCTATTGCCAGAGATATATCAATTTTGAATCAAA]
[+] EMBL BM421105 [ GCATGATTGGGTGAAGAAACTGCTGGAAGAGGGCAGGCTGGA GT CTGATTGACCCACAACTTACTGGAAATCTACAATGGTGGGGAACAGGGAGTTCGAGAGGAGGTGAGGTTGCTGGTGCAGATTGCGCTGCTCTGCACCCAGGAGTCCGCTCCAAGCCGCCCCAGAATGTCAACGGTGGTGACAATGCTAGTAAGACGGTATCGCGGAGCACTGGGATGCATGGCAAAGGAAGACGATTGTGCAGGCAAGCCTGCAAGGAGGACAGGGCGTTTCTGAGGCTCGCAATGACTCTGTTGCAAATCTCCCTCCAGACACATTGTCTGGTCCAAGGTGACTGCCACCTTAAGGACTATGAAGGGTGGTTCTTCTTTTGTAGAGCTTAGTGAACTTAGACAGAACACTTGCCATTCTTAAAAAAACAGCAGATTATATGTTTTCTTGTAGCATGTGTATGTGTTTTAGTTTTTCCCCTTTTTTTCCAAGTAATTCATAATCACTACTAGACACAGGGCTTTCAGAAAaaaaaaa ]
consensusID : consensus_9952#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 285 fasta sequence
[TTTTTCAATAAAGATCTGATTACAACATTAAAANAAGTTTCATGTCAACTACACAGAGTGCTCTGATTCACAACAACCACTTGACTGGCCAACACGAAGAAAAATCGCGTTAGGGTCTGCAAGAGGGATCTCTTACTTGCATGAAGGATGTGATCCCAAAATTATCCATCGAGATGTCAAAGCTGCTAACATTTTGTTGGATGAAAAACTTGAAGCAGTTGTTGGTGATTTCGGTCTGGCTAGAATTATGGGATTACAAAGTTTCCCATGTTGTAACCGGCGTGA]
[-] EMBL C22490 [TTTTTCAATAAAGATCTGATTACAACATTAAAANAAGTTTCATGTCAACTACACAGAGTGCTCTGATTCACAACAACCACTTGACTGGCCAACACGAAGAAAAATCGCGTTAGGGTCTGCAAGAGGGATCTCTTACTTGCATGAAGGATGTGATCCCAAAATTATCCATCGAGATGTCAAAGCTGCTAACATTTTGTTGGATGAAAAACTTGAAGCAGTTGTTGGTGATTTCGGTCTGGCTAGAATTATGGGATTACAAAGTTTCCCATGTTGTAACCGGCGTGA]
consensusID : consensus_9952#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 176 fasta sequence
[TTTCTGAGGCTCCATGACTCTGTTCAATCTCCCTCCAGACACATTGTCTGGTCCAAGGTGACTGCCACCTTAAGGACTATGAAGGGTGGTTCTTCTTTTGTAGAGCTTAGTGAACTTAGACAGAACACCTTGCCATTTCTTAAAAAAACACCCAGATATAGTTTTCTTGTACAAAA]
[+] EMBL BI813548 [TTTCTGAGGCTCCATGACTCTGTTCAATCTCCCTCCAGACACATTGTCTGGTCCAAGGTGACTGCCACCTTAAGGACTATGAAGGGTGGTTCTTCTTTTGTAGAGCTTAGTGAACTTAGACAGAACACCTTGCCATTTCTTAAAAAAACACCCAGATATAGTTTTCTTGTACAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9952#0 CCCCCAAGCATTTTTGCAAAACTTGTTTGGAACTTTGGCCACCGCCGCCGGCGCCGCGAC 60
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GCGACGACGGGAAGGCGCCGGCCGCCGGCGGCCAGCGGCGCTGGCGGTGAAGCCGATCGA 120
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GGAGGCGTCCTCCACCGCTCGGCGACCAACCGCCGACGGCGACGGCGATGGCGACAGCGC 180
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GCACCATGCAGGGGGCCCCACTCTGTTTACTCCCCCGCGTCCGCGACCGCGAAGTCTCCG 240
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GTCTCCGCCGCGCCCGCGTCGCCTCGCCCTGACCACCACCAGTCCACCGCCGCGGCCCAC 300
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 ACGGCACAGCCTCTCACAAGGGAGGAAGGGGGAAGTGAGCCCCCGCGCCACGGCCACGCG 360
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 CCGCGGGCTTCCTCCTCCTCCTCCTCCTCCTCCTCCCCGAGCCGCACGCCGATCGATGGC 420
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 CGCGCGGCGGCGCCTCCTCCTGCTCCTCGTCCTCCTGCTGTGCCGCCTCGCCGCCGTCCT 480
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 CCCCACCTCCGAAGTGGAGGCCTTGCAGGGTTTCATGGCAGGGTTCGCCGGCGGCAACGC 540
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GGCGTTCCAGAGCTGGGACGCGTCCGCGCCCAACCCTTGCACCTGGTTCCATGTCACCTG 600
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 TGGCCCGGGGAACCAGGTCATCAGGCTGGATCTCGGGAACCAGTCGCTGTCCGGCGAGTT 660
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GAAGCCCGACATTTGGCAGCTGCAAGCATTGCAATCCCTGGAACTTTATGGCAATAGCAT 720
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 CAGCGGGAAAATACCTAGCGAGCTTGGGCGGTTAGCTAGCTTGCAAACTTTGGATCTCTA 780
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 CTTGAACAATTTCACCGGTGAAATACCGAATGAACTGGGAAATTTATCGAAGCTCAGTAA 840
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 CCTCCGTCTGAACAACAATAGTCTGTCAGGTGCAATTCCCATGTCATTGACAACAATCCA 900
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 AAATCTTGAAGTGCTGGACTTGTCACATAACAACTTGTCGGGAATAATACCGACCAATGG 960
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 TTCATTTTCACACTTCACCCCAATCAGTTTCTCCAATAACCCACGTACTTTCGCAAATTC 1020
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 TTCTGATTCGCCATCAAATAACTCGGGAGCAGCGGTGCCATCAGGAAGAAGTAGTGCATC 1080
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 CAGCATTGGAACAATTGCTGGTGGAGCTGCTGCAGGTGCTGCCATGTTGTTTGCTGCTCC 1140
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 TATTGTATTGTTCGCATGGTGGTGGCGGCGTAAACCACATGACCAATTCTTTGACCTACT 1200
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 AGAAGAAGAAACTCCAGAAGTTCATCTGGGTCAGCTTAGAAGGTTCACACTGAGAGAACT 1260
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GCAGGTGGCAACAGATAACTTCAGTCAAACTAATTTGCTAGGGAGAGGAGGCTTTGGAAA 1320
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GGTCTATAAAGGAAGGTTGTTAGATGGTTCATTGATAGCAATAAAAAGACTAAATGAAGA 1380
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 TCGAATTGGAACTGGAGAGCGGCAGTTCCTAATGGAAGTCGAGATCATCAGCATGGCCGT 1440
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GCATCAAAATCTCCTACGCCTCCAGGGGTATTGTATGACACCCACCGAGCGGCTGCTTGT 1500
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GTATCCTTACATGGAGAATAAAAGCCTTGAGACACGCTTACGAGAGTGCTCTGATTCACA 1560
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 ACAACCACTTGACTGGCCAACACGAAGAAAAATCGCGTTAGGGTCTGCAAGAGGGATCTC 1620
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 TTACTTGCATGAAGGATGTGATCCCAAAATTATCCATCGAGATGTCAAAGCTGCTAACAT 1680
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 TTTGTTGGATGAAAAACTTGAAGCAGTTGTTGGTGATTTCGGTCTGGCTAGAATTATGGA 1740
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 TTACAAAGTTTCCCATGTTGTAACCGGCGTGATGGGGACATTGGGGCACATTCCCATGGA 1800
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GTACCTGACTGCAGGAAGAACTTCAGATAAAACTGATGTTTTTGGGTATGGAATCATGCT 1860
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 TTTTGAACTGATTAGTGGGAAAAGGGGATTTGATCTTGTTGGTCTTGCAAATGAAGAAAA 1920
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 TGCCAGAGTGCATGATTGGGTGAAGAAACTGCTGGAAGAGGACAGGCTGGAGGTGCTGAT 1980
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 TGACCCAAACTTACTGGAAATCTACAATGGTGGGGAACAGGGAGTGCGAGAGGAGATGAG 2040
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GTTGCTGGTGCAGATTGCGCTGCTCTGCACCCAGGAGTCCGCTCCAAGCCGCCCCAGAAT 2100
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GTCAACGGTGGTGACAATGCTAGAAGACGGTATCGCGGAGCACTGGGATGCATGGCAAAG 2160
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 GAAGACGATTGTGCAGGCAAGCCTGCAAGGAGGACAGGGCGTTTC--TGAGGCTCGCA-- 2216
consensus_9952#2 -----------------------------------------TTTC--TGAGGCTCC---- 13
consensus_9952#1 ---------------------------------------TTTTTCAATAAAGATCTGATT 21
**** * * * **
consensus_9952#0 ATGACTCTGTTGCAAATCTCCCTCCAGACACATTG-----TCTGGTCCAAGGTGACTGCC 2271
consensus_9952#2 ATGACTCTGTT--CAATCTCCCTCCAGACACATTG-----TCTGGTCCAAGGTGACTGCC 66
consensus_9952#1 ACAACATTAAAANAAGTTTCATGTCAACTACACAGAGTGCTCTGATTCACAACAACCACT 81
* ** * * * ** ** *** * **** * ** ** *
consensus_9952#0 ACCTTAAGGACTATGAAGGGTGGTTCTT-------TTGTAGAG-------CTTAGTGAAC 2317
consensus_9952#2 ACCTTAAGGACTATGAAGGGTGGTTCTTCT----TTTGTAGAG-------CTTAGTGAAC 115
consensus_9952#1 TGACTGGCCAACACGAAGAAAAATCGCGTTAGGGTCTGCAAGAGGGATCTCTTACTTGCA 141
* * * **** * ** * **** *
consensus_9952#0 TTAGACAGAACAC-TTGCCATT-CTTAAAAAAACAGCAGATTAT---ATGTTTTCTTGTA 2372
consensus_9952#2 TTAGACAGAACACCTTGCCATTTCTTAAAAAAACACCCAGATAT---A-GTTTTCTTGTA 171
consensus_9952#1 TGAAGGATGTGATCCCAAAATTATCCATCGAGATGTCAAAGCTGCTAACATTTTGTTGGA 201
* * * * *** * * * * * **** *** *
consensus_9952#0 GCATGTGTATGTATTTTAGTTTTTCCCCTTTTTTTCAAGTAATTCATAATCACTACTAGA 2432
consensus_9952#2 CAAAA------------------------------------------------------- 176
consensus_9952#1 TGAAAAACTTGAAGCAGTTGTTGGTGATTTCGGTCTGGCTAGAATTATGGGATTACAAAG 261
*
consensus_9952#0 CACAGGGCTTTCAGAAACTGTTCAGAAACCACATCATAGTTATGCTAACGCATCAATACA 2492
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 TTTCCCATGTTGTAACCGGCGTGA------------------------------------ 285
consensus_9952#0 TGTGGTTGTGCTACTCCAGGATCATCAAAGGCGGTTATTTAACCCTCTCTGAAAAAAAAA 2552
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 CATAACTAGAGATGGCTCGAAGGTGAGCTGTAACCTATTGCCAGAGATATATCAATTTTG 2612
consensus_9952#2 ------------------------------------------------------------
consensus_9952#1 ------------------------------------------------------------
consensus_9952#0 AATCAAA 2619
consensus_9952#2 -------
consensus_9952#1 -------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||