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Oryza sativa
cluster # 9964 cluster # 9964       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9964#0 length = 1850 sequences # 5  
consensus_9964#1 length = 1154 sequences # 2  

consensusID : consensus_9964#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1850
fasta sequence
                              [GTTGGCAGCTGCCCTGTTTCTGCTTCATGTCCTGCCCAAAATGCCCTCCTCCTACCCTCCACGCGGCTGTGTATACAAAGAGAACGCATCCCCCCATTGCTCACTTGCCCCCTCCTCCTCTTTCACACCTCACCTCCCACCAAGATAAAGAGCAAGAACAGCAAGAGCAAGAAGAGGAGGAGGGAGACCACACAATCTATCACAAGCTTAGCAAGATTTATCAGCAAGGAAATGGCAGCTCTGACGAGCTACGAGATGGCGGCCTCCATCTTGCTCTGCGCCGAGGACAGCAGCAGCGTCCTCGGCTTCGGCGGCGAGGAAGAGGAAGAGGAGGAGGACGTCGTGGCTGGGAAGAGGGCCAGGTGCGCTGGTCCGCCGCCGCCGCCGTGCGTGGACGTCGCTGGCGTGGATTTCGCCGTGCCGTCGGAGGAATGCGTCGCCCGCCTGGTGGAGACGGAGGCGGACCACATGCCGAGGGAGGACTACGCCGAGAGGCTGCGCGCCGGCGGCGGCGACGGCGACCTGGATCTTCGCGTCAGGATGGATGCCATCGATTGGATTTGGAAGGTTCACTCCTACTACAGCTTCGCTCCTCTTACTGCCTGCTTGGCCGTCAACTACTTGGACCGCTTCCTCTCACTCTACCAGCTTCCGGATGGCAAGGATTGGATGACGCAGCTGCTAGCAGTAGCGTGCTTGTCGCTTGCTGCCAAGATGGAGGAAACCGATGTGCCTCAATCGCTGGACCTGCAGGTCGGGGAAGAACGGTACGTGTTCGAGGCGAAGACGATCCAGAGGATGGAGCTGCTGGTCCTGAGCACCCTCAAATGGAGGATGCAGGCCGTCACTCCCTTCTCCTACGTCGACTACTTCCTCCGCGAGCTCAACGGCGGCGATCCGCCGTCGGGACGCTCGGCGCTGCTGTCTTCAGAGCTCATCTTGTGCATAGCTAGAGGAACAGAATGCTTGGGATTCAGGCCGTCGGAGATCGCCGCCGCGGTCGCCGCCGCCGTGGTCGGAGAAGAACACGCCGCTTTCTCCCATGTAAATAAGGAGAGGATGTCGCATTGCCAGGAAGTGATTCAGGCCATGGAGTTGATACATCCAAAACCTTCAAGCCCCAGCAGAGTCTTCGTCTCCTCCTCCATTCCACGGAGCCCTACTGGCGTGTTGGATGCAGCAGGCTGCCTCAGCTACAGGAGTG-ACGATT-CAGCTGTTGCC-TCACACTA-CGCAGCAAG-CAGCTGGGGA-TATGAACATGATAGCTCCCCGGTTAGCAG-CAAGAGGAGGAAGA-TTAG-CAGATGATGCAG-CCAATGATGGATCAATTAAAAGTCTGTTTATATGTGTTGCGAAACTGATCGTGCATCTCTCTTTCTTGGGAAAGTCAAATGGTTTTGATTGCAAATGACTGTGGAG-CCTTTCGATGCCGTATGGGAGCTAGAG-CCTGAAAGGCGATGAAGGACCAAAAGCAAGGCATTTTCGACATGGCAACAGAGCAAAGATACTGATGGATAAAGAGAGTCTGAGGTAGACATGTGCTCCAATATTTTCATGTGCTTTAGCGTTAGTTGCTAGGAGGCAGGCAGCCACAAAAGAGTAGAGGATTTGTGGGAAGAGAGCCGGGCGAGATGAAAATGAGATGACCAAAATAAAGGCAGAGACGAGGTGACAGTGGCACAAGGCAAAGCGAGCTAGGCACTGACACTCCAGATGTCCTGCGTGTGTTTCAGTTTTGCGTTGTTCTGTAATTTCCCCTGCTTAATTCCTTTGTGAAGAAAAATCATAAAAAAGGAGAGAAACAAACAAAAATGGTGTCAAACTCCAATAATTCAGCATAACTAAACTACAAGAAG]

[+] EMBL AB080248             [GTTGGCAGCTGCCCTGTTTCTGCTTCATGTCCTGCCCAAAATGCCCTCCTCCTACCCTCCACGCGGCTGTGTATACAAAGAGAACGCATCCCCCCATTGCTCACTTGCCCCCTCCTCCTCTTTCACACCTCACCTCCCACCAAGATAAAGAGCAAGAACAGCAAGAGCAAGAAGAGGAGGAGGGAGACCACACAATCTATCACAAGCTTAGCAAGATTTATCAGCAAGGAAATGGCAGCTCTGACGAGCTACGAGATGGCGGCCTCCATCTTGCTCTGCGCCGAGGACAGCAGCAGCGTCCTCGGCTTCGGCGGCGAGGAAGAGGAAGAGGAGGAGGACGTCGTGGCTGGGAAGAGGGCCAGGTGCGCTGGTCCGCCGCCGCCGCCGTGCGTGGACGTCGCTGGCGTGGATTTCGCCGTGCCGTCGGAGGAATGCGTCGCCCGCCTGGTGGAGACGGAGGCGGACCACATGCCGAGGGAGGACTACGCCGAGAGGCTGCGCGCCGGCGGCGGCGACGGCGACCTGGATCTTCGCGTCAGGATGGATGCCATCGATTGGATTTGGAAGGTTCACTCCTACTACAGCTTCGCTCCTCTTACTGCCTGCTTGGCCGTCAACTACTTGGACCGCTTCCTCTCACTCTACCAGCTTCCGGATGGCAAGGATTGGATGACGCAGCTGCTAGCAGTAGCGTGCTTGTCGCTTGCTGCCAAGATGGAGGAAACCGATGTGCCTCAATCGCTGGACCTGCAGGTCGGGGAAGAACGGTACGTGTTCGAGGCGAAGACGATCCAGAGGATGGAGCTGCTGGTCCTGAGCACCCTCAAATGGAGGATGCAGGCCGTCACTCCCTTCTCCTACGTCGACTACTTCCTCCGCGAGCTCAACGGCGGCGATCCGCCGTCGGGACGCTCGGCGCTGCTGTCTTCAGAGCTCATCTTGTGCATAGCTAGAGGAACAGAATGCTTGGGATTCAGGCCGTCGGAGATCGCCGCCGCGGTCGCCGCCGCCGTGGTCGGAGAAGAACACGCCGCTTTCTCCCATGTAAATAAGGAGAGGATGTCGCATTGCCAGGAAGTGATTCAGGCCATGGAGTTGATACATCCAAAACCTTCAAGCCCCAGCAGAGTCTTCGTCTCCTCCTCCATTCCACGGAGCCCTACTGGCGTGTTGGATGCAGCAGGCTGCCTCAGCTACAGGAGTG ACGATT CAGCTGTTGCC TCACACTA CGCAGCAAG CAGCTGGGGA TATGAACATGATAGCTCCCCGGTTAGCAG CAAGAGGAGGAAGA TTAG CAGATGATGCAG CCAATGATGGATCAATTAAAAGTCTGTTTATATGTGTTGCGAAACTGATCGTGCATCTCTCTTTCTTGGGAAAGTCAAATGGTTTTGATTGCAAATGACTGTGGAG CCTTTCGATGCCGTATGGGAGCTAGAG CCTGAAAGGCGATGAAGGACCAAAAGCAAGGCATTTTCGACATGGCAACAGAGCAAAGATACTGATGGATAAAGAGAGTCTGAGGTAGACATGTGCTCCAATATTTTCATGTGCTTTAGCGTTAGTTGCTAGGAGGCAGGCAGCCACAAAAGAGTAGAGGATTTGTGGGAAGAGAGCCGGGCGAGATGAAAATGAGATGACCAAAATAAAGGCAGAGACGAGGTGACAGTGGCACAAGGCAAAGCGAGCTAGGCACTGACACTCCAGATGTCCTGCGTGTGTTTCAGTTTTGCGTTGTTCTGTAATTTCCCCTGCTTAATTCCTTTGTGAAGAAAAATCATAAAAAAGGAGAGAAACAAACAA                                               ]
[+] EMBL AK063940             [                                                                                                                                                                                                                                           CAGCTCTGACGAGCTACGAGATGGCGGCCTCCATCTTGCTCTGCGCCGAGGACAGCAGCAGCGTCCTCGGCTTCGGCGGCGAGGAAGAGGAAGAGGAGGAGGACGTCGTGGCTGGGAAGAGGGCCAGGTGCGCTGGTCCGCCGCCGCCGCCGTGCGTGGACGTCGCTGGCGTGGATTTCGCCGTGCCGTCGGAGGAATGCGTCGCCCGCCTGGTGGAGACGGAGGCGGACCACATGCCGAGGGAGGACTACGCCGAGAGGCTGCGCGCCGGCGGCGGCGACGGCGACCTGGATCTTCGCGTCAGGATGGATGCCATCGATTGGATTTGGAAGGTTCACTCCTACTACAGCTTCGCTCCTCTTACTGCCTGCTTGGCCGTCAACTACTTGGACCGCTTCCTCTCACTCTACCAGCTTCCGGATGGCAAGGATTGGATGACGCAGCTGCTAGCAGTAGCGTGCTTGTCGCTTGCTGCCAAGATGGAGGAAACCGATGTGCCTCAATCGCTGGACCTGCAGGTCGGGGAAGAACGGTACGTGTTCGAGGCGAAGACGATCCAGAGGATGGAGCTGCTGGTCCTGAGCACCCTCAAATGGAGGATGCAGGCCGTCACTCCCTTCTCCTACGTCGACTACTTCCTCCGCGAGCTCAACGGCGGCGATCCGCCGTCGGGACGCTCGGCGCTGCTGTCTTCAGAGCTCATCTTGTGCATAGCTAGAGGAACAGAATGCTTGGGATTCAGGCCGTCGGAGATCGCCGCCGCGGTCGCCGCCGCCGTGGTCGGAGAAGAACACGCCGCTTTCTCCCATGTAAATAAGGAGAGGATGTCGCATTGCCAGGAAGTGATTCAGGCCATGGAGTTGATACATCCAAAACCTTCAAGCCCCAGCAGAGTCTTCGTCTCCTCCTCCATTCCACGGAGCCCTACTGGCGTGTTGGATGCAGCAGGCTGCCTCAGCTACAGGAGTG ACGATT CAGCTGTTGCC TCACACTA CGCAGCAAG CAGCTGGGGA TATGAACATGATAGCTCCCCGGTTAGCAG CAAGAGGAGGAAGA TTAG CAGATGATGCAG CCAATGATGGATCAATTAAAAGTCTGTTTATATGTGTTGCGAAACTGATCGTGCATCTCTCTTTCTTGGGAAAGTCAAATGGTTTTGATTGCAAATGACTGTGGAG CCTTTCGATGCCGTATGGGAGCTAGAG CCTGAAAGGCGATGAAGGACCAAAAGCAAGGCATTTTCGACATGGCAACAGAGCAAAGATACTGATGGATAAAGAGAGTCTGAGGTAGACATGTGCTCCAATATTTTCATGTGCTTTAGCGTTAGTTGCTAGGAGGCAGGCAGCCACAAAAGAGTAGAGGATTTGTGGGAAGAGAGCCGGGCGAGATGAAAATGAGATGACCAAAATAAAGGCAGAGACGAGGTGACAGTGGCACAAGGCAAAGCGAGCTAGGCACTGACACTCCAGATGTCCTGCGTGTGTTTCAGTTTTGCGTTGTTCTGTAATTTCCCCTGCTTAATTCCTTTGTGAAGAAAAATCATAAAAAAGGAGAGAAACAAACAATTTTGGTGTCAAACTCCAATAATTCAGCATAACTAAACTACAAGAAG]
[+] EMBL CB676959             [                                                                                                                                                                                                                                                                                                                                                                          GTGCGCTGGTCCGCCGCCGCCGCCGTGCGTGGACGTCGCTGGCGTGGATTTCGCCGTGCCGTCGGAGGAATGCGTCGCCCGCCTGGTGGAGACGGAGGCGGACCACATGCCGAGGGAGGACTACGCCGAGAGGCTGCGCGCCGGCGGCGGCGACGGCGACCTGGATCTTCGCGTCAGGATGGATGCCATCGATTGGATTTGGAAGGTTCACTCCTACTACAGCTTCGCTCCTCTTACTGCCTGCTTGGCCGTCAACTACTTGGACCGCTTCCTCTCACTCTACCAGCTTCCGGATGGCAAGGATTGGATGACGCAGCTGCTAGCAGTAGCGTGCTTGTCGCTTGCTGCCAAGATGGAGGAAACCGATGTGCCTCAATCGCTGGACCTGCAGGTCGGGGAAGAACGGTACGTGTTCGAGGCGAAGACGATCCAGAGGATGGAGCTGCTGGTCCTGAGCACCCTCAAATGGAGGATGCAGGCCGTCACTCCCTTCTCCTACGTCGACTACTTCCTCCGCGAGCTCAACGGCGGCGATCCGCCGTCGGGACGCTCGGCGCTGCTGTCTTCAGAGCTCATCTTGTGCATAGCTAGAGGAACAGAATGCTTGGGATTCAGGCCGTCGGAGATCGCCGCCGCGGTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB676960             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACCTTCAAGCCCCAGCAGAGTCTTGGTCTCCTCCTCCATTCCACGGAGCCCTACTGGCGTGTTGGATGCAGCAGGCTGCCTCAGCTACAGGAGTG ACGATT CAGCTGTTGCC TCACACTA CGCAGCAAG CAGCTGGGGA TATGAACATGATAGCTCCCCGGTTAGCAG CAAGAGGAGGAAGA TTAG CAGATGATGCAG CCAATGATGGATCAATTAAAAGTCTGTTTATATGTGTTGCGAAACTGATCGTGCATCTCTCTTTCTTGGGAAAGTCAAATGGTTTTGATTGCAAATGACTGTGGAG CCTTTCGATGCCGTATGGGAGCTAGAG CCTGAAAGGCGATGAAGGACCAAAAGCAAGGCATTTTCGACATGGCAACAGAGCAAAGATACTGATGGATAAAGAGAGTCTGAGGTAGACATGTGCTCCAATATTTTCATGTGCTTTAGCGTTAGTTGCTAGGAGGCAGGCAGCCACAAAAGAGTAGAGGATTTGTGGGAAGAGAGCCGGGCGAGATGAAAATGAGATGACCAAAATAAAGGCAGAGACGAGGTGACAGTGGCACAAGGCAAAGCGAGCTAGGCACTGACACTCCAGATGTCCTGCGTGTGTTTCAGTTTTGCGTTGTTCTGTAATTTCCCCTGCTTAATTCCTTAGTGAAGAAAAATCATAAAAAAGGAGAGAAACAACCAAAAAAGGga                                       ]
[+] EMBL AU031020             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          acCAGGAGTGNCCGATTCCAGCTGTTCCCTTCACACTACCGCAGCAAGCCAGCTGGGGATTTTGAACCTGATAGCTCCCCCGTTACCAGCCAAGAGGAGGAAGATTTAGCCAGATGATGCAGCCCAATGATGGATCAATTAAAAGTCTGTTTATATGTGTTGCGAAACTGATCGTGCATCTCTCTTTCTTGGGAAAGTCAAATGGTTTTGATTGCAAATGACTGTGGAGCCCTTTCGATGCCGTATGGGAGCTAGAGCCCTGAAAGGCGATGAAGGACCAAAAGCAAGGCATTTTCGACATGGCAACAGAGCAAAGATACTGATGGATAAAGAGAGTCTGAGGTAGACATGTGCTCCAATATTTTCATGTGCTTTAGCGTTAGTTGCTAGGAGGCAGGCAGCCACAAAAGAGTAGAGGATTTGTGGGAAGAGAGCCGGGCGAGATGAAAATGAGATGACCAAAATAAAGGCAGAGACGAGGTGACAGTGGCACAAGGCAAAGCGAGCTAGGCACTGACACTCCAGATGTCCTGCGTGTGTTTCAGTTTTGCGTTGTTCTGTAATTTCCCCTGCTTAATTCCTTTGTGAAGAAAAATCATAAAAAAGGAGAGAAACAAACAAAAA                                            ]


>consensus_9964#0 GTTGGCAGCTGCCCTGTTTCTGCTTCATGTCCTGCCCAAAATGCCCTCCTCCTACCCTCC ACGCGGCTGTGTATACAAAGAGAACGCATCCCCCCATTGCTCACTTGCCCCCTCCTCCTC TTTCACACCTCACCTCCCACCAAGATAAAGAGCAAGAACAGCAAGAGCAAGAAGAGGAGG AGGGAGACCACACAATCTATCACAAGCTTAGCAAGATTTATCAGCAAGGAAATGGCAGCT CTGACGAGCTACGAGATGGCGGCCTCCATCTTGCTCTGCGCCGAGGACAGCAGCAGCGTC CTCGGCTTCGGCGGCGAGGAAGAGGAAGAGGAGGAGGACGTCGTGGCTGGGAAGAGGGCC AGGTGCGCTGGTCCGCCGCCGCCGCCGTGCGTGGACGTCGCTGGCGTGGATTTCGCCGTG CCGTCGGAGGAATGCGTCGCCCGCCTGGTGGAGACGGAGGCGGACCACATGCCGAGGGAG GACTACGCCGAGAGGCTGCGCGCCGGCGGCGGCGACGGCGACCTGGATCTTCGCGTCAGG ATGGATGCCATCGATTGGATTTGGAAGGTTCACTCCTACTACAGCTTCGCTCCTCTTACT GCCTGCTTGGCCGTCAACTACTTGGACCGCTTCCTCTCACTCTACCAGCTTCCGGATGGC AAGGATTGGATGACGCAGCTGCTAGCAGTAGCGTGCTTGTCGCTTGCTGCCAAGATGGAG GAAACCGATGTGCCTCAATCGCTGGACCTGCAGGTCGGGGAAGAACGGTACGTGTTCGAG GCGAAGACGATCCAGAGGATGGAGCTGCTGGTCCTGAGCACCCTCAAATGGAGGATGCAG GCCGTCACTCCCTTCTCCTACGTCGACTACTTCCTCCGCGAGCTCAACGGCGGCGATCCG CCGTCGGGACGCTCGGCGCTGCTGTCTTCAGAGCTCATCTTGTGCATAGCTAGAGGAACA GAATGCTTGGGATTCAGGCCGTCGGAGATCGCCGCCGCGGTCGCCGCCGCCGTGGTCGGA GAAGAACACGCCGCTTTCTCCCATGTAAATAAGGAGAGGATGTCGCATTGCCAGGAAGTG ATTCAGGCCATGGAGTTGATACATCCAAAACCTTCAAGCCCCAGCAGAGTCTTCGTCTCC TCCTCCATTCCACGGAGCCCTACTGGCGTGTTGGATGCAGCAGGCTGCCTCAGCTACAGG AGTGACGATTCAGCTGTTGCCTCACACTACGCAGCAAGCAGCTGGGGATATGAACATGAT AGCTCCCCGGTTAGCAGCAAGAGGAGGAAGATTAGCAGATGATGCAGCCAATGATGGATC AATTAAAAGTCTGTTTATATGTGTTGCGAAACTGATCGTGCATCTCTCTTTCTTGGGAAA GTCAAATGGTTTTGATTGCAAATGACTGTGGAGCCTTTCGATGCCGTATGGGAGCTAGAG CCTGAAAGGCGATGAAGGACCAAAAGCAAGGCATTTTCGACATGGCAACAGAGCAAAGAT ACTGATGGATAAAGAGAGTCTGAGGTAGACATGTGCTCCAATATTTTCATGTGCTTTAGC GTTAGTTGCTAGGAGGCAGGCAGCCACAAAAGAGTAGAGGATTTGTGGGAAGAGAGCCGG GCGAGATGAAAATGAGATGACCAAAATAAAGGCAGAGACGAGGTGACAGTGGCACAAGGC AAAGCGAGCTAGGCACTGACACTCCAGATGTCCTGCGTGTGTTTCAGTTTTGCGTTGTTC TGTAATTTCCCCTGCTTAATTCCTTTGTGAAGAAAAATCATAAAAAAGGAGAGAAACAAA CAAAAATGGTGTCAAACTCCAATAATTCAGCATAACTAAACTACAAGAAG



consensusID : consensus_9964#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1154
fasta sequence
                              [TCAGTAATTCTGTGCACTTGTCTGCAGGATGGCAAGGATTGGATGACGCAGCTGCTAGCAGTAGCGTGCTTGTCGCTTGCTGCCAAGATGGAGGAAACCGATGTGCCTCAATCGCTGGACCTGCAGGTCGGGGAAGAACGGTACGTGT-TCGAGGCGAAGACGATCCAGAGGATGGAGCTGCTGGTCCTGAGCACCCTCAAATGGAGGATGCAGGCCGTCACTCCCTTCTCCTACGTCGACTACTTCCTCCGCGAGCTCAACGGCGGCGATCCGCCGTCGGGACGCTCGGCGCTGCTGTCTTCAGAGCTCATCTTGTGCATAGCTAGAGGAACAGAATGCTTGGGATTCAGGCCGTCGGAGATCGCCGCCGCGGTCGCCGCCGCCGTGGTCGGAGAAGAACACGCCGCTTTCTCCCATGTAAATAAGGAGAGGATGTCGCATTGCCAGGAAGTGATTCAGGCCATGGAGTTGATACATCCAAAACCTTCAAGCCCCAGCAGAGTCTTCGTCTCCTCCTCCATTCCACGGAGCCCTACTGGCGTGTTGGATGCAGCAGGCTGCCTCAGCTACAGGAGTGACGATTCAGCTGTTGCCTCACACTACGCAGCAAGCAGCTGGGGATATGAACATGATAGCTCCCCGGTTAGCAGCAAGAGGAGGAAGATTAGCAGATGATGCAGCCAATGATGGATCAATTAAAAGTCTGTTTATATGTGTTGCGAAACTGATCGTGCATCTCTCTTTCTTGGGAAAGTCAAATGGTTTTGATTGCAAATGACTGTGGAGCCTTTCGATGCCGTATGGGAGCTAGAGCCTGAAAGGCGATGAAGGACCAAAAGCAAGGCATTTTCGACATGGCAACAGAGCAAAGATACTGATGGATAAAGAGAGTCTGAGGTAGACATGTGCTCCAATATTTTCATGTGCTTTAGCGTTAGTTGCTAGGAGGCAGGCAGCCACAAAAGAGTAGAGGATTTGTGGGAAGAGAGCCGGGCGAGATGAAAATGAGATGACCAAAATAAAGGCAGAGACGAGGTGACAGTGGCACAAGGCAAAGCGAGCTAGGCACTGACACTCCAGATGTCCTGCGTGTGTTTCAGTTTTGCGTTGTTCTGTAATTTCCCCTGCTTAATTCCTTTGTGAAGAAAAATCAT]

[+] EMBL AK102698             [TCAGTAATTCTGTGCACTTGTCTGCAGGATGGCAAGGATTGGATGACGCAGCTGCTAGCAGTAGCGTGCTTGTCGCTTGCTGCCAAGATGGAGGAAACCGATGTGCCTCAATCGCTGGACCTGCAGGTCGGGGAAGAACGGTACGTGT TCGAGGCGAAGACGATCCAGAGGATGGAGCTGCTGGTCCTGAGCACCCTCAAATGGAGGATGCAGGCCGTCACTCCCTTCTCCTACGTCGACTACTTCCTCCGCGAGCTCAACGGCGGCGATCCGCCGTCGGGACGCTCGGCGCTGCTGTCTTCAGAGCTCATCTTGTGCATAGCTAGAGGAACAGAATGCTTGGGATTCAGGCCGTCGGAGATCGCCGCCGCGGTCGCCGCCGCCGTGGTCGGAGAAGAACACGCCGCTTTCTCCCATGTAAATAAGGAGAGGATGTCGCATTGCCAGGAAGTGATTCAGGCCATGGAGTTGATACATCCAAAACCTTCAAGCCCCAGCAGAGTCTTCGTCTCCTCCTCCATTCCACGGAGCCCTACTGGCGTGTTGGATGCAGCAGGCTGCCTCAGCTACAGGAGTGACGATTCAGCTGTTGCCTCACACTACGCAGCAAGCAGCTGGGGATATGAACATGATAGCTCCCCGGTTAGCAGCAAGAGGAGGAAGATTAGCAGATGATGCAGCCAATGATGGATCAATTAAAAGTCTGTTTATATGTGTTGCGAAACTGATCGTGCATCTCTCTTTCTTGGGAAAGTCAAATGGTTTTGATTGCAAATGACTGTGGAGCCTTTCGATGCCGTATGGGAGCTAGAGCCTGAAAGGCGATGAAGGACCAAAAGCAAGGCATTTTCGACATGGCAACAGAGCAAAGATACTGATGGATAAAGAGAGTCTGAGGTAGACATGTGCTCCAATATTTTCATGTGCTTTAGCGTTAGTTGCTAGGAGGCAGGCAGCCACAAAAGAGTAGAGGATTTGTGGGAAGAGAGCCGGGCGAGATGAAAATGAGATGACCAAAATAAAGGCAGAGACGAGGTGACAGTGGCACAAGGCAAAGCGAGCTAGGCACTGACACTCCAGATGTCCTGCGTGTGTTTCAGTTTTGCGTTGTTCTGTAATTTCCCCTGCTTAATTCCTTTGTGAAGAAAAATCAT]
[+] EMBL AU031019             [                                                                                                                             GGTCGGGGAAGAACGGTACGTGTNTCGAGGCGAAGACNNTCCAGAGGATGGAGCTGCTGGTCCTGAGCACCCTCAAATGGAGGATGCAGGCCGTCACTCCCTTCTCCTACGTCGACTACTTCCTCCGCGAGCTCAACGGCGGCGATCCG NTCCGGGACGCTCGGCGCTGCTGTCTTCAGAGCTCATCTTGTGCATAGCTAGAGGAACAGAATGCTTGGGATTCAGGCCGTCGGAGATCGCCGCCG GGTCGCCGCCGCCGTGGTCGGAGAAGAACACGCCGCTTTCTCCCATGTAAATAAGGAGAGGATGTCGCATTGCCAGGAAGTGATTCAGGCCATGGAGTTGATACATCCAAAACCTTCAAGCCCCAGCAGA TCTTCG CTCCTCCTNCATTCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_9964#1 TCAGTAATTCTGTGCACTTGTCTGCAGGATGGCAAGGATTGGATGACGCAGCTGCTAGCA GTAGCGTGCTTGTCGCTTGCTGCCAAGATGGAGGAAACCGATGTGCCTCAATCGCTGGAC CTGCAGGTCGGGGAAGAACGGTACGTGTTCGAGGCGAAGACGATCCAGAGGATGGAGCTG CTGGTCCTGAGCACCCTCAAATGGAGGATGCAGGCCGTCACTCCCTTCTCCTACGTCGAC TACTTCCTCCGCGAGCTCAACGGCGGCGATCCGCCGTCGGGACGCTCGGCGCTGCTGTCT TCAGAGCTCATCTTGTGCATAGCTAGAGGAACAGAATGCTTGGGATTCAGGCCGTCGGAG ATCGCCGCCGCGGTCGCCGCCGCCGTGGTCGGAGAAGAACACGCCGCTTTCTCCCATGTA AATAAGGAGAGGATGTCGCATTGCCAGGAAGTGATTCAGGCCATGGAGTTGATACATCCA AAACCTTCAAGCCCCAGCAGAGTCTTCGTCTCCTCCTCCATTCCACGGAGCCCTACTGGC GTGTTGGATGCAGCAGGCTGCCTCAGCTACAGGAGTGACGATTCAGCTGTTGCCTCACAC TACGCAGCAAGCAGCTGGGGATATGAACATGATAGCTCCCCGGTTAGCAGCAAGAGGAGG AAGATTAGCAGATGATGCAGCCAATGATGGATCAATTAAAAGTCTGTTTATATGTGTTGC GAAACTGATCGTGCATCTCTCTTTCTTGGGAAAGTCAAATGGTTTTGATTGCAAATGACT GTGGAGCCTTTCGATGCCGTATGGGAGCTAGAGCCTGAAAGGCGATGAAGGACCAAAAGC AAGGCATTTTCGACATGGCAACAGAGCAAAGATACTGATGGATAAAGAGAGTCTGAGGTA GACATGTGCTCCAATATTTTCATGTGCTTTAGCGTTAGTTGCTAGGAGGCAGGCAGCCAC AAAAGAGTAGAGGATTTGTGGGAAGAGAGCCGGGCGAGATGAAAATGAGATGACCAAAAT AAAGGCAGAGACGAGGTGACAGTGGCACAAGGCAAAGCGAGCTAGGCACTGACACTCCAG ATGTCCTGCGTGTGTTTCAGTTTTGCGTTGTTCTGTAATTTCCCCTGCTTAATTCCTTTG TGAAGAAAAATCAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9964#0      GTTGGCAGCTGCCCTGTTTCTGCTTCATGTCCTGCCCAAAATGCCCTCCTCCTACCCTCC 60
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      ACGCGGCTGTGTATACAAAGAGAACGCATCCCCCCATTGCTCACTTGCCCCCTCCTCCTC 120
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      TTTCACACCTCACCTCCCACCAAGATAAAGAGCAAGAACAGCAAGAGCAAGAAGAGGAGG 180
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      AGGGAGACCACACAATCTATCACAAGCTTAGCAAGATTTATCAGCAAGGAAATGGCAGCT 240
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      CTGACGAGCTACGAGATGGCGGCCTCCATCTTGCTCTGCGCCGAGGACAGCAGCAGCGTC 300
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      CTCGGCTTCGGCGGCGAGGAAGAGGAAGAGGAGGAGGACGTCGTGGCTGGGAAGAGGGCC 360
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      AGGTGCGCTGGTCCGCCGCCGCCGCCGTGCGTGGACGTCGCTGGCGTGGATTTCGCCGTG 420
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      CCGTCGGAGGAATGCGTCGCCCGCCTGGTGGAGACGGAGGCGGACCACATGCCGAGGGAG 480
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      GACTACGCCGAGAGGCTGCGCGCCGGCGGCGGCGACGGCGACCTGGATCTTCGCGTCAGG 540
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      ATGGATGCCATCGATTGGATTTGGAAGGTTCACTCCTACTACAGCTTCGCTCCTCTTACT 600
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      GCCTGCTTGGCCGTCAACTACTTGGACCGCTTCCTCTCACTCTACCAGCTTCCGGATGGC 660
consensus_9964#1      --------------------------TCAGTAATTCT-GTGCACTTGTCTGCAGGATGGC 33
                                                 *  *   ***    *      ** * *******

consensus_9964#0      AAGGATTGGATGACGCAGCTGCTAGCAGTAGCGTGCTTGTCGCTTGCTGCCAAGATGGAG 720
consensus_9964#1      AAGGATTGGATGACGCAGCTGCTAGCAGTAGCGTGCTTGTCGCTTGCTGCCAAGATGGAG 93
                      ************************************************************

consensus_9964#0      GAAACCGATGTGCCTCAATCGCTGGACCTGCAGGTCGGGGAAGAACGGTACGTGTTCGAG 780
consensus_9964#1      GAAACCGATGTGCCTCAATCGCTGGACCTGCAGGTCGGGGAAGAACGGTACGTGTTCGAG 153
                      ************************************************************

consensus_9964#0      GCGAAGACGATCCAGAGGATGGAGCTGCTGGTCCTGAGCACCCTCAAATGGAGGATGCAG 840
consensus_9964#1      GCGAAGACGATCCAGAGGATGGAGCTGCTGGTCCTGAGCACCCTCAAATGGAGGATGCAG 213
                      ************************************************************

consensus_9964#0      GCCGTCACTCCCTTCTCCTACGTCGACTACTTCCTCCGCGAGCTCAACGGCGGCGATCCG 900
consensus_9964#1      GCCGTCACTCCCTTCTCCTACGTCGACTACTTCCTCCGCGAGCTCAACGGCGGCGATCCG 273
                      ************************************************************

consensus_9964#0      CCGTCGGGACGCTCGGCGCTGCTGTCTTCAGAGCTCATCTTGTGCATAGCTAGAGGAACA 960
consensus_9964#1      CCGTCGGGACGCTCGGCGCTGCTGTCTTCAGAGCTCATCTTGTGCATAGCTAGAGGAACA 333
                      ************************************************************

consensus_9964#0      GAATGCTTGGGATTCAGGCCGTCGGAGATCGCCGCCGCGGTCGCCGCCGCCGTGGTCGGA 1020
consensus_9964#1      GAATGCTTGGGATTCAGGCCGTCGGAGATCGCCGCCGCGGTCGCCGCCGCCGTGGTCGGA 393
                      ************************************************************

consensus_9964#0      GAAGAACACGCCGCTTTCTCCCATGTAAATAAGGAGAGGATGTCGCATTGCCAGGAAGTG 1080
consensus_9964#1      GAAGAACACGCCGCTTTCTCCCATGTAAATAAGGAGAGGATGTCGCATTGCCAGGAAGTG 453
                      ************************************************************

consensus_9964#0      ATTCAGGCCATGGAGTTGATACATCCAAAACCTTCAAGCCCCAGCAGAGTCTTCGTCTCC 1140
consensus_9964#1      ATTCAGGCCATGGAGTTGATACATCCAAAACCTTCAAGCCCCAGCAGAGTCTTCGTCTCC 513
                      ************************************************************

consensus_9964#0      TCCTCCATTCCACGGAGCCCTACTGGCGTGTTGGATGCAGCAGGCTGCCTCAGCTACAGG 1200
consensus_9964#1      TCCTCCATTCCACGGAGCCCTACTGGCGTGTTGGATGCAGCAGGCTGCCTCAGCTACAGG 573
                      ************************************************************

consensus_9964#0      AGTGACGATTCAGCTGTTGCCTCACACTACGCAGCAAGCAGCTGGGGATATGAACATGAT 1260
consensus_9964#1      AGTGACGATTCAGCTGTTGCCTCACACTACGCAGCAAGCAGCTGGGGATATGAACATGAT 633
                      ************************************************************

consensus_9964#0      AGCTCCCCGGTTAGCAGCAAGAGGAGGAAGATTAGCAGATGATGCAGCCAATGATGGATC 1320
consensus_9964#1      AGCTCCCCGGTTAGCAGCAAGAGGAGGAAGATTAGCAGATGATGCAGCCAATGATGGATC 693
                      ************************************************************

consensus_9964#0      AATTAAAAGTCTGTTTATATGTGTTGCGAAACTGATCGTGCATCTCTCTTTCTTGGGAAA 1380
consensus_9964#1      AATTAAAAGTCTGTTTATATGTGTTGCGAAACTGATCGTGCATCTCTCTTTCTTGGGAAA 753
                      ************************************************************

consensus_9964#0      GTCAAATGGTTTTGATTGCAAATGACTGTGGAGCCTTTCGATGCCGTATGGGAGCTAGAG 1440
consensus_9964#1      GTCAAATGGTTTTGATTGCAAATGACTGTGGAGCCTTTCGATGCCGTATGGGAGCTAGAG 813
                      ************************************************************

consensus_9964#0      CCTGAAAGGCGATGAAGGACCAAAAGCAAGGCATTTTCGACATGGCAACAGAGCAAAGAT 1500
consensus_9964#1      CCTGAAAGGCGATGAAGGACCAAAAGCAAGGCATTTTCGACATGGCAACAGAGCAAAGAT 873
                      ************************************************************

consensus_9964#0      ACTGATGGATAAAGAGAGTCTGAGGTAGACATGTGCTCCAATATTTTCATGTGCTTTAGC 1560
consensus_9964#1      ACTGATGGATAAAGAGAGTCTGAGGTAGACATGTGCTCCAATATTTTCATGTGCTTTAGC 933
                      ************************************************************

consensus_9964#0      GTTAGTTGCTAGGAGGCAGGCAGCCACAAAAGAGTAGAGGATTTGTGGGAAGAGAGCCGG 1620
consensus_9964#1      GTTAGTTGCTAGGAGGCAGGCAGCCACAAAAGAGTAGAGGATTTGTGGGAAGAGAGCCGG 993
                      ************************************************************

consensus_9964#0      GCGAGATGAAAATGAGATGACCAAAATAAAGGCAGAGACGAGGTGACAGTGGCACAAGGC 1680
consensus_9964#1      GCGAGATGAAAATGAGATGACCAAAATAAAGGCAGAGACGAGGTGACAGTGGCACAAGGC 1053
                      ************************************************************

consensus_9964#0      AAAGCGAGCTAGGCACTGACACTCCAGATGTCCTGCGTGTGTTTCAGTTTTGCGTTGTTC 1740
consensus_9964#1      AAAGCGAGCTAGGCACTGACACTCCAGATGTCCTGCGTGTGTTTCAGTTTTGCGTTGTTC 1113
                      ************************************************************

consensus_9964#0      TGTAATTTCCCCTGCTTAATTCCTTTGTGAAGAAAAATCATAAAAAAGGAGAGAAACAAA 1800
consensus_9964#1      TGTAATTTCCCCTGCTTAATTCCTTTGTGAAGAAAAATCAT------------------- 1154
                      *****************************************                   

consensus_9964#0      CAAAAATGGTGTCAAACTCCAATAATTCAGCATAACTAAACTACAAGAAG 1850
consensus_9964#1      --------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)