These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9971#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 4014 fasta sequence [AGCAGCAGCAGCACAAATCAAGTGATCCGTAGTTGCTGCTTCTTCGAATTCTCCTCTCAATTCAACCTGCCTCGATCTCGCTCTCGCTCTCGCTCTCTACCCGAGTGCACCATTAAGGAGGATGAGTGCCGCGGCGACCACCGGCGGCGGCGGCGAGCGGCGGAGCCTCCGTGGCATGTTCAAGTTCGCGGACCGGGTGGACGTGCTGCTCATGGCGCTGGGCACGCTGGGTGCCATCGGCGACGGGTGCTCGACCAACCTGCTCCTCATCTTCGCCAGCGACGTGATGAACTCGCTCGGGTACGCGCGCGCCGGCGCCCACGGCGGCGCCGCCGCCGCCACCGGCGTGGACTTCATGCGCGAGGTCGAGAAGTCTTGCCTGAATTTCGTGTACCTGGCGTTCGCGGTGCTGGCAGTGGCGTTTATGGAGGGGTATTGCTGGAGCAGGACGAGCGAGAGGCAGGTGCTGAGGATCAGGTACCTGTACCTGCAGGCCATACTGCGGCAGGAGGTGGGCTTCTTCGACTCGCAGGAGGCCACCACCTCGGAGATCATCAACAGCATCTCCAAGGACGCCTCGCTCATTCAGGAAGTTCTCAGTGAGAAGGTTCCACTCTTTCTGATGCACTCTACAGTTTTCATCTCTGGGCTGGCATTCTCCACATATTTCTCCTGGAGGCTGGCTCTGGTTTCTTTTCCTCTGGTCCTGCTCCTGATAATTCCAGGGCTCATCTACGGCAAGTATCTCCTGTACCTCTCCCGACAATCGCGCCACGAGTACACAAACGCAAACTCGTTGGTTGAGCAAGCTCTTGGCTCTATCAAGACTGTCTACTCTTTCACTGCTGAGAAAAGGATAATCCAGAGATACACAGCAGTTCTTGACAAGACGATCAAGCTGGGGATTAGACAAGGTATTGCGAAAGGTTTGGCTGTCGGATTCACGGGCCTTTCCTTCGCCATCTGGGCTTTCCTCGCTTGGTACGGCAGTAGACTGGTGATGTACCATCATGAAAGCGGAGGAAGGATATATGCTGCAGGGATTTCCTTCGTTTTAGGCGGCCTATCCCTTGGAATGGCACTCCCTGAACTGAAGCATTTCACAGAAGCGTCGGTTGCTGCCACAAGAATTCTCGATCGGATAAACCGTGTGCCAGAGATAAATGCTGATGACCCCAAGGGACTTATTTTGGATCAAGTCCGGGGAGAGCTTCAGTTTGAGTCTGTCCGCTTTGTTTACCCATCGAGGCCTAACATGACGGTCCTCAAAGACTTCAACCTCCAGATTCCTGCTGGGCAAACTGTTGCCTTGGTTGGATCCAGTGGCAGCGGCAAGTCAACCGCAATAGCATTGGTTCAACGGTTCTATGATGCCACTGAAGGAACTGTCAAGGTTGACGGTGTCAACATTAAAGAACTCCAGCTCAAGTGGATCAGGAGCAAGATGGGGCTTGTCAGCCAAGATCATGCACTCTTCGGTACATCCATAAAAGAGAACATCTTGTTTGGCAAACCAGATGCAACAATGGATGAACTGTATGCAGCAGCCATGACAGCAAATGCTCACAACTTCATAAGGGGGCTTCCTGAGGAATATGAGACTAAGATTGGCGAGCGTGGAGCACTGCTATCTGGTGGCCAGAAGCAACGTATTGCCATTGCACGGGCAGTCATCAAGAACCCGGCTATACTTTTGCTCGATGAAGCCACAAGTGCACTTGATTCAGAATCAGAAAAGCTGGTGCAGCATGCACTTGACCAAGCATCTATGGGAAGAACAACACTGGTAGTAGCTCATAAGCTTTCCACAGTGAAGAATGCCGATCAGATTGCAGTGGTTGATGGGGGCACTATAGCTGAAATTGGCACACACGATGAACTGATTAATAAGGGTGGCCCATATTCACGACTTGTGAAACTGCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGTGGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACCAGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCACCATCTTTCTCCAGGCTTCTTGCGATGAATGCACCAGAGTGGAGACAAGCAGTCATAGGAAGTCTCTCTGCTTTGGTATATGGTTCCTTGCAGCCCATCTATGCTATAACCATCGGAGGAATGATTGCTGCATTTTTTGTTCAAGATCTCAAAGAGATGAATGCAATTATCAGCCGCTATGCCTTGATTTTCTGCTCATTGTCGGTGATATCCATTGTTGTTAATCTACTTCAACATTACAATTTTGCTTACATGGGAGAGCATCTAGTAAGGCGTATCAGAGTCCAAGTACTTGAAAAGATCTTAACCTTTGAGGCAGCATGGTTTGATGAAGAAACTAATTCAAGTGGTTCACTGTGCTCTCGGCTTAGCAATGAGGCTTCTCTTGTCAAAACCCTTGTTGCAGATAGAATTTCCCTACTGCTTCAGACAGCTTCTGGAATTATAATTGCAGTGACAATGGGCCTTATAGTAGCTTGGAAACTTGCTCTTGTCATGATCGCTGTACAGCCAACTACGATGATATGCTACTATGCCAAAAAGATAGTTCTCTCAAATGTGTCAAGGGACTTAGCAAAGGCTCAGCACCAAAGTACTCAGATTGCTATAGAAGCTG-TTACAACCACAGGATGGTGACCTCTTTTGGATGCTCATCAAAGGTTCTTCAGCTCTTTGAGCATACACAAGAGGAACCACTGAAGAGAGCAAGGAAGAAATCATGGGTGGCCGGGATCACCACTGGACTGTCACCTTGCCTTTCATTCTTGTCATGGGCTCTTGACTTCTGGTATGGTGGGAAATTGGCACAATCTGGGGAGATCTCCGCAGGTGATGTCTTCAAAACATTTTTTGTCTTGGTGAGTACAGGAAAGTTGATTGCTGATGCTGGCAGCATGACATCCGACCTGGCTAAGGGAGCAAATGCAGTTGCTTCAGTGTTTGAGGTGCTAGACAGGAAATCTATCTCTCCACAAAATTCACAGGTGGAAAAGGACAATCAGAAGAACAAAATACAAGGAAGGATAGAGTTCAAAAGGGTAGATTTTGCATATCCGACAAGACCACAATGCCTTATCCTGCAGGATTTTAGCTTGGATGTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATCATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAAACTGCTTGTATAATGTAAAGTACTGCCATAAGTGACATGACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTCTTCTTCTTCTGTCATCAGAAGATGTATCTTACCTAGAACTTGTCTTTCAAGAGGTCTAAGATATGAATAAATGCAAACTAGTACAAAAAAAAAAAA] [+] EMBL AK067006 [AGCAGCAGCAGCACAAATCAAGTGATCCGTAGTTGCTGCTTCTTCGAATTCTCCTCTCAATTCAACCTGCCTCGATCTCGCTCTCGCTCTCGCTCTCTACCCGAGTGCACCATTAAGGAGGATGAGTGCCGCGGCGACCACCGGCGGCGGCGGCGAGCGGCGGAGCCTCCGTGGCATGTTCAAGTTCGCGGACCGGGTGGACGTGCTGCTCATGGCGCTGGGCACGCTGGGTGCCATCGGCGACGGGTGCTCGACCAACCTGCTCCTCATCTTCGCCAGCGACGTGATGAACTCGCTCGGGTACGCGCGCGCCGGCGCCCACGGCGGCGCCGCCGCCGCCACCGGCGTGGACTTCATGCGCGAGGTCGAGAAGTCTTGCCTGAATTTCGTGTACCTGGCGTTCGCGGTGCTGGCAGTGGCGTTTATGGAGGGGTATTGCTGGAGCAGGACGAGCGAGAGGCAGGTGCTGAGGATCAGGTACCTGTACCTGCAGGCCATACTGCGGCAGGAGGTGGGCTTCTTCGACTCGCAGGAGGCCACCACCTCGGAGATCATCAACAGCATCTCCAAGGACGCCTCGCTCATTCAGGAAGTTCTCAGTGAGAAGGTTCCACTCTTTCTGATGCACTCTACAGTTTTCATCTCTGGGCTGGCATTCTCCACATATTTCTCCTGGAGGCTGGCTCTGGTTTCTTTTCCTCTGGTCCTGCTCCTGATAATTCCAGGGCTCATCTACGGCAAGTATCTCCTGTACCTCTCCCGACAATCGCGCCACGAGTACACAAACGCAAACTCGTTGGTTGAGCAAGCTCTTGGCTCTATCAAGACTGTCTACTCTTTCACTGCTGAGAAAAGGATAATCCAGAGATACACAGCAGTTCTTGACAAGACGATCAAGCTGGGGATTAGACAAGGTATTGCGAAAGGTTTGGCTGTCGGATTCACGGGCCTTTCCTTCGCCATCTGGGCTTTCCTCGCTTGGTACGGCAGTAGACTGGTGATGTACCATCATGAAAGCGGAGGAAGGATATATGCTGCAGGGATTTCCTTCGTTTTAGGCGGCCTATCCCTTGGAATGGCACTCCCTGAACTGAAGCATTTCACAGAAGCGTCGGTTGCTGCCACAAGAATTCTCGATCGGATAAACCGTGTGCCAGAGATAAATGCTGATGACCCCAAGGGACTTATTTTGGATCAAGTCCGGGGAGAGCTTCAGTTTGAGTCTGTCCGCTTTGTTTACCCATCGAGGCCTAACATGACGGTCCTCAAAGACTTCAACCTCCAGATTCCTGCTGGGCAAACTGTTGCCTTGGTTGGATCCAGTGGCAGCGGCAAGTCAACCGCAATAGCATTGGTTCAACGGTTCTATGATGCCACTGAAGGAACTGTCAAGGTTGACGGTGTCAACATTAAAGAACTCCAGCTCAAGTGGATCAGGAGCAAGATGGGGCTTGTCAGCCAAGATCATGCACTCTTCGGTACATCCATAAAAGAGAACATCTTGTTTGGCAAACCAGATGCAACAATGGATGAACTGTATGCAGCAGCCATGACAGCAAATGCTCACAACTTCATAAGGGGGCTTCCTGAGGAATATGAGACTAAGATTGGCGAGCGTGGAGCACTGCTATCTGGTGGCCAGAAGCAACGTATTGCCATTGCACGGGCAGTCATCAAGAACCCGGCTATACTTTTGCTCGATGAAGCCACAAGTGCACTTGATTCAGAATCAGAAAAGCTGGTGCAGCATGCACTTGACCAAGCATCTATGGGAAGAACAACACTGGTAGTAGCTCATAAGCTTTCCACAGTGAAGAATGCCGATCAGATTGCAGTGGTTGATGGGGGCACTATAGCTGAAATTGGCACACACGATGAACTGATTAATAAGGGTGGCCCATATTCACGACTTGTGAAACTGCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGTGGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACCAGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCACCATCTTTCTCCAGGCTTCTTGCGATGAATGCACCAGAGTGGAGACAAGCAGTCATAGGAAGTCTCTCTGCTTTGGTATATGGTTCCTTGCAGCCCATCTATGCTATAACCATCGGAGGAATGATTGCTGCATTTTTTGTTCAAGATCTCAAAGAGATGAATGCAATTATCAGCCGCTATGCCTTGATTTTCTGCTCATTGTCGGTGATATCCATTGTTGTTAATCTACTTCAACATTACAATTTTGCTTACATGGGAGAGCATCTAGTAAGGCGTATCAGAGTCCAAGTACTTGAAAAGATCTTAACCTTTGAGGCAGCATGGTTTGATGAAGAAACTAATTCAAGTGGTTCACTGTGCTCTCGGCTTAGCAATGAGGCTTCTCTTGTCAAAACCCTTGTTGCAGATAGAATTTCCCTACTGCTTCAGACAGCTTCTGGAATTATAATTGCAGTGACAATGGGCCTTATAGTAGCTTGGAAACTTGCTCTTGTCATGATCGCTGTACAGCCAACTACGATGATATGCTACTATGCCAAAAAGATAGTTCTCTCAAATGTGTCAAGGGACTTAGCAAAGGCTCAGCACCAAAGTACTCAGATTGCTATAGAAGCTG TTACAACCACAGGATGGTGACCTCTTTTGGATGCTCATCAAAGGTTCTTCAGCTCTTTGAGCATACACAAGAGGAACCACTGAAGAGAGCAAGGAAGAAATCATGGGTGGCCGGGATCACCACTGGACTGTCACCTTGCCTTTCATTCTTGTCATGGGCTCTTGACTTCTGGTATGGTGGGAAATTGGCACAATCTGGGGAGATCTCCGCAGGTGATGTCTTCAAAACATTTTTTGTCTTGGTGAGTACAGGAAAGTTGATTGCTGATGCTGGCAGCATGACATCCGACCTGGCTAAGGGAGCAAATGCAGTTGCTTCAGTGTTTGAGGTGCTAGACAGGAAATCTATCTCTCCACAAAATTCACAGGTGGAAAAGGACAATCAGAAGAACAAAATACAAGGAAGGATAGAGTTCAAAAGGGTAGATTTTGCATATCCGACAAGACCACAATGCCTTATCCTGCAGGATTTTAGCTTGGATGTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATCATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAAACTGCTTGTATAATGTAAAGTACTGCCATAAGTGACATGACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTCTTCTTCTTCTGTCATCAGAAGATGTATCTTACCTAGAACTTGTCTTTCAAGAGGTCTAAGATATGAATAAAT ] [+] EMBL CB677572 [ CCAGATTCCTGCTGGGCAAACTGTTGCCTTGGTTGGATCCAGTGGCAGCGGCAAGTCAACCGCAATAGCATTGGTTCAACGGTTCTATGATGCCACTGAAGGAACTGTCAAGGTTGACGGTGTCAACATTAAAGAACTCCAGCTCAAGTGGATCAGGAGCAAGATGGGGCTTGTCAGCCAAGATCATGCACTCTTCGGTACATCCATAAAAGAGAACATCTTGTTTGGCAAACCAGATGCAACAATGGATGAACTGTATGCAGCAGCCATGACAGCAAATGCTCACAACTTCATAAGGGGGCTTCCTGAGGAATATGAGACTAAGATTGGCGAGCGTGGAGCACTGCTATCTGGTGGCCAGAAGCAACGTATTGCCATTGCACGGGCAGTCATCAAGAACCCGGCTATACTTTTGCTCGATGAAGCCACAAGTGCACTTGATTCAGAATCAGAAAAGCTGGTGCAGCATGCACTTGACCAAGCATCTATGGGAAGAACAACACTGGTAGTAGCTCATAAGCTTTCCACAGTGAAGAATGCCGATCAGATTGCAGTGGTTGATGGGGGCACTATAGCTGAAATTGGCACACACGATGAACTGATTAATAAGGGTGGCCCATATTCACGACTTGTGAAACTGCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGTGGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACCAGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCA ] [+] EMBL AK061902 [ CCATATTCACGACTTGTGAAACTGCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGTGGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACCAGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCACCATCTTTCTCCAGGCTTCTTGCGATGAATGCACCAGAGTGGAGACAAGCAGTCATAGGAAGTCTCTCTGCTTTGGTATATGGTTCCTTGCAGCCCATCTATGCTATAACCATCGGAGGAATGATTGCTGCATTTTTTGTTCAAGATCTCAAAGAGATGAATGCAATTATCAGCCGCTATGCCTTGATTTTCTGCTCATTGTCGGTGATATCCATTGTTGTTAATCTACTTCAACATTACAATTTCGCTTACATGGGAGAGCATCTAGTAAGGCGTATCAGAGTCCAAGTACTTGAAAAGATCTTAACCTTTGAGGCAGCATGGTTTGATGAAGAAACTAATTCAAGTGGTTCACTGTGCTCTCGGCTTAGCAATGAGGCTTCTCTTGTCAAAACCCTTGTTGCAGATAGAATTTCCCTACTGCTTCAGACAGCTTCTGGAATTATAATTGCAGTGACAATGGGCCTTATAGTAGCTTGGAAACTTGCTCTTGTCATGATCGCTGTACAGCCAACTACGATGATATGCTACTATGCCAAAAAGATAGTTCTCTCAAATGTGTCAAGGGACTTAGCAAAGGCTCAGCACCAAAGTACTCAGATTGCTATAGAAGCTGTTTACAACCACAGGATGGTGTCCTCTTTTGGATGCTCATCAAAGGTTCTTCAGCTCTTTGAGCATACACAAGAGGAACCACTGAAGAGAGCAAGGAAGAAATCATGGGTGGCCGGGATCACCACTGGACTGTCACCTTGCCTTTCATTCTTGTCATGGGCTCTTGACTTCTGGTATGGTGGGAAATTGGCACAATCTGGGGAGATCTCCGCAGGTGATGTCTTCAAAACATTTTTTGTCTTGGTGAGTACAGGAAAGTTGATTGCTGATGCTGGCAGCATGACATCCGACCTGGCTAAGGGAGCAAATGCAGTTGCTTCAGTGTTTGAGGTGCTAGACAGGAAATCTATCTCTCCACAAAATTCACAGGTGGAAAAGGACAATCAGAAGAACAAAATACAAGGAAGGATAGAGTTCAAAAGGGTAGATTTTGCATATCCGACAAGACCACAATGCCTTATCCTGCAGGATTTTAGCTTGGATGTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATCATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAAACTGCTTGTATAATGTAAAGTACTGCCATAAGTGACATGACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTCTTCTTCTTCTGTCATCAGAAGATGTATCTTACCTAGAACTTGTCTTTCAAGAGGTCTAAGATATGAATAAATGC ] [-] EMBL CB677573 [ cTGGATGTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATCATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAAACTGCTTGTATAATGTAAAGTACTGCCATAAGTGACATGACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTCTTCTTCTTCTGTCATCAGAAGATGTATCTTACCTAGAACTTGTCTTTCAAGAGGTCTAAGATATGAATAAATGCA ] [+] EMBL CA999011 [ GGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGA ] [+] EMBL CF309617 [ CTAGCGGCTCTTCAGAAATAAACTGCTTGTATAATGTAAAGTACTGCCATAAGTGACATGACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTCTTCTTCTTCTGTCATCAGAAGATGTATCTTACCTAGAACTTGTCTTTCAAGAGGTCTAAGATATGAATAAATGCAAACTAGTACAAAAAAAAAAAA] consensusID : consensus_9971#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 267 fasta sequence [ATGGACTGAAGGAGTATTATACACCCCAGCGGCTCTTCAGAAATAAACTGCTTGCATAATGTAAAGTCCTGCCATAAGTAAAAAAACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTTTTCTTCTTCTGTCATCAAAAAATGAATCTAACCTAGAACAAATAAAACAAAAGGTAAAAAAAAAAAAACAACACAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGGTACGT] [-] EMBL CF309618 [ATGGACTGAAGGAGTATTATACACCCCAGCGGCTCTTCAGAAATAAACTGCTTGCATAATGTAAAGTCCTGCCATAAGTAAAAAAACAACTTAATATAGCATAATATCAGTGCCACTTAACAAGTTTTGGGGTAATTTTTTCTTCTTCTGTCATCAAAAAATGAATCTAACCTAGAACAAATAAAACAAAAGGTAAAAAAAAAAAAACAACACAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGGTACGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9971#0 AGCAGCAGCAGCACAAATCAAGTGATCCGTAGTTGCTGCTTCTTCGAATTCTCCTCTCAA 60 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 TTCAACCTGCCTCGATCTCGCTCTCGCTCTCGCTCTCTACCCGAGTGCACCATTAAGGAG 120 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GATGAGTGCCGCGGCGACCACCGGCGGCGGCGGCGAGCGGCGGAGCCTCCGTGGCATGTT 180 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CAAGTTCGCGGACCGGGTGGACGTGCTGCTCATGGCGCTGGGCACGCTGGGTGCCATCGG 240 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CGACGGGTGCTCGACCAACCTGCTCCTCATCTTCGCCAGCGACGTGATGAACTCGCTCGG 300 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GTACGCGCGCGCCGGCGCCCACGGCGGCGCCGCCGCCGCCACCGGCGTGGACTTCATGCG 360 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CGAGGTCGAGAAGTCTTGCCTGAATTTCGTGTACCTGGCGTTCGCGGTGCTGGCAGTGGC 420 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GTTTATGGAGGGGTATTGCTGGAGCAGGACGAGCGAGAGGCAGGTGCTGAGGATCAGGTA 480 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CCTGTACCTGCAGGCCATACTGCGGCAGGAGGTGGGCTTCTTCGACTCGCAGGAGGCCAC 540 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CACCTCGGAGATCATCAACAGCATCTCCAAGGACGCCTCGCTCATTCAGGAAGTTCTCAG 600 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 TGAGAAGGTTCCACTCTTTCTGATGCACTCTACAGTTTTCATCTCTGGGCTGGCATTCTC 660 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CACATATTTCTCCTGGAGGCTGGCTCTGGTTTCTTTTCCTCTGGTCCTGCTCCTGATAAT 720 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 TCCAGGGCTCATCTACGGCAAGTATCTCCTGTACCTCTCCCGACAATCGCGCCACGAGTA 780 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CACAAACGCAAACTCGTTGGTTGAGCAAGCTCTTGGCTCTATCAAGACTGTCTACTCTTT 840 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CACTGCTGAGAAAAGGATAATCCAGAGATACACAGCAGTTCTTGACAAGACGATCAAGCT 900 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GGGGATTAGACAAGGTATTGCGAAAGGTTTGGCTGTCGGATTCACGGGCCTTTCCTTCGC 960 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CATCTGGGCTTTCCTCGCTTGGTACGGCAGTAGACTGGTGATGTACCATCATGAAAGCGG 1020 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 AGGAAGGATATATGCTGCAGGGATTTCCTTCGTTTTAGGCGGCCTATCCCTTGGAATGGC 1080 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 ACTCCCTGAACTGAAGCATTTCACAGAAGCGTCGGTTGCTGCCACAAGAATTCTCGATCG 1140 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GATAAACCGTGTGCCAGAGATAAATGCTGATGACCCCAAGGGACTTATTTTGGATCAAGT 1200 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CCGGGGAGAGCTTCAGTTTGAGTCTGTCCGCTTTGTTTACCCATCGAGGCCTAACATGAC 1260 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GGTCCTCAAAGACTTCAACCTCCAGATTCCTGCTGGGCAAACTGTTGCCTTGGTTGGATC 1320 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CAGTGGCAGCGGCAAGTCAACCGCAATAGCATTGGTTCAACGGTTCTATGATGCCACTGA 1380 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 AGGAACTGTCAAGGTTGACGGTGTCAACATTAAAGAACTCCAGCTCAAGTGGATCAGGAG 1440 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CAAGATGGGGCTTGTCAGCCAAGATCATGCACTCTTCGGTACATCCATAAAAGAGAACAT 1500 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CTTGTTTGGCAAACCAGATGCAACAATGGATGAACTGTATGCAGCAGCCATGACAGCAAA 1560 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 TGCTCACAACTTCATAAGGGGGCTTCCTGAGGAATATGAGACTAAGATTGGCGAGCGTGG 1620 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 AGCACTGCTATCTGGTGGCCAGAAGCAACGTATTGCCATTGCACGGGCAGTCATCAAGAA 1680 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CCCGGCTATACTTTTGCTCGATGAAGCCACAAGTGCACTTGATTCAGAATCAGAAAAGCT 1740 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GGTGCAGCATGCACTTGACCAAGCATCTATGGGAAGAACAACACTGGTAGTAGCTCATAA 1800 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GCTTTCCACAGTGAAGAATGCCGATCAGATTGCAGTGGTTGATGGGGGCACTATAGCTGA 1860 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 AATTGGCACACACGATGAACTGATTAATAAGGGTGGCCCATATTCACGACTTGTGAAACT 1920 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGT 1980 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACC 2040 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 AGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCACCATCTTTCTCCAGGCT 2100 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 TCTTGCGATGAATGCACCAGAGTGGAGACAAGCAGTCATAGGAAGTCTCTCTGCTTTGGT 2160 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 ATATGGTTCCTTGCAGCCCATCTATGCTATAACCATCGGAGGAATGATTGCTGCATTTTT 2220 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 TGTTCAAGATCTCAAAGAGATGAATGCAATTATCAGCCGCTATGCCTTGATTTTCTGCTC 2280 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 ATTGTCGGTGATATCCATTGTTGTTAATCTACTTCAACATTACAATTTTGCTTACATGGG 2340 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 AGAGCATCTAGTAAGGCGTATCAGAGTCCAAGTACTTGAAAAGATCTTAACCTTTGAGGC 2400 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 AGCATGGTTTGATGAAGAAACTAATTCAAGTGGTTCACTGTGCTCTCGGCTTAGCAATGA 2460 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GGCTTCTCTTGTCAAAACCCTTGTTGCAGATAGAATTTCCCTACTGCTTCAGACAGCTTC 2520 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 TGGAATTATAATTGCAGTGACAATGGGCCTTATAGTAGCTTGGAAACTTGCTCTTGTCAT 2580 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GATCGCTGTACAGCCAACTACGATGATATGCTACTATGCCAAAAAGATAGTTCTCTCAAA 2640 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 TGTGTCAAGGGACTTAGCAAAGGCTCAGCACCAAAGTACTCAGATTGCTATAGAAGCTGT 2700 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 TACAACCACAGGATGGTGACCTCTTTTGGATGCTCATCAAAGGTTCTTCAGCTCTTTGAG 2760 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CATACACAAGAGGAACCACTGAAGAGAGCAAGGAAGAAATCATGGGTGGCCGGGATCACC 2820 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 ACTGGACTGTCACCTTGCCTTTCATTCTTGTCATGGGCTCTTGACTTCTGGTATGGTGGG 2880 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 AAATTGGCACAATCTGGGGAGATCTCCGCAGGTGATGTCTTCAAAACATTTTTTGTCTTG 2940 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GTGAGTACAGGAAAGTTGATTGCTGATGCTGGCAGCATGACATCCGACCTGGCTAAGGGA 3000 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GCAAATGCAGTTGCTTCAGTGTTTGAGGTGCTAGACAGGAAATCTATCTCTCCACAAAAT 3060 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 TCACAGGTGGAAAAGGACAATCAGAAGAACAAAATACAAGGAAGGATAGAGTTCAAAAGG 3120 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GTAGATTTTGCATATCCGACAAGACCACAATGCCTTATCCTGCAGGATTTTAGCTTGGAT 3180 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATC 3240 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 ATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATG 3300 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAG 3360 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGAT 3420 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTA 3480 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 AAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAG 3540 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 CAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAA 3600 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 GCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATC 3660 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 ATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGAT 3720 consensus_9971#1 ------------------------------------------------------------ consensus_9971#0 TCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATG 3780 consensus_9971#1 -----------------------------------------------------------A 1 consensus_9971#0 AGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAAACTGCTTGTATAATG 3840 consensus_9971#1 TGGACTGAAGGAGTATTATACACCCCAGCGGCTCTTCAGAAATAAACTGCTTGCATAATG 61 * * ****** *** **** ** *************************** ****** consensus_9971#0 TAAAGTACTGCCATAAGTGACATGACAACTTAATATAGCATAATATCAGTGCCACTTAAC 3900 consensus_9971#1 TAAAGTCCTGCCATAAGTAAAAAAACAACTTAATATAGCATAATATCAGTGCCACTTAAC 121 ****** *********** * * ************************************ consensus_9971#0 AAGTTTTGGGGTAATTTCTTCTTCTTCTGTCATCAGAAGATGTATCTTACCTAGAACTTG 3960 consensus_9971#1 AAGTTTTGGGGTAATTTTTTCTTCTTCTGTCATCAAAAAATGAATCTAACCTAGAACAAA 181 ***************** ***************** ** *** **** ********* consensus_9971#0 TCTTTCAAGAGGTCTAAGATATGAATAAATGCAAACTAGTACAAAAAAAAAAAA------ 4014 consensus_9971#1 TAAAACAAAAGGTAAAAAAAAAAAAACAACACAAACAAAAACAAAAAAAAAAAAAAAAAA 241 * *** **** ** * * ** ** ***** * ************** consensus_9971#0 -------------------------- consensus_9971#1 AAAAAAACACTGTCATGCCGGTACGT 267 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||