cluster # 9973

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Oryza sativa
cluster # 9973 cluster # 9973 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9973#0 length = 765 sequences # 7
consensusID : consensus_9973#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 765
fasta sequence
                              [TTTTTTATTGATAGCGTACACTATGCGCACATTAATTTAATGGTGGAATAGTCATTGTCGTTAAAACAATTAACAACGGCGCAATATCACCATCGTTAAATAAATAACAAGGACACTATCGTGGATTCTATATTTTGAAGAAAGTTTCACTCAAAAGTGAATCAGATATGAATCAGTACTGCAAGAAATAAGTATGTCTTGTCATATCAATTTTTTTTACCACGCAAAGAAATATTTTATTTACCGCTCTAATGGATCGTTGGATGTATTTTGACTGCCTTGGCCATCTGGTG-GTGTTGGTACGGCACCCATCCAAGCTCCATATGGGGAAACAAATGAATTAATCTGCAGTGGAGGTGCTGTCCACCAACTTGGAACAGCCATGGCTTCACCAGACAAAGGGAAGGCGACGCCGGGCTTCA-CTACACCA-CCCCACCAAGGAACGCCGGGAGGCAAAGCTTGAGGCGTTGGAGGAGCAATCTCCCGCTTGGATCTATGGCTCATCACTTGAGGTTTGAGGAGATATGAGGATTAGGGATGAGTTTCAGGAAGACTGAGCGACAAGCGGTGGATTTATGGATTAGGGGCA-AACTTGGCTTGGGTCTACCGCGGGAATAAGAGGGTGATTTGGCGCATAAACTACGCGGGAAGATTAGCAGCCATGGGGATTTGGCGCCCTAGAGAAGAGGAGAGCGCGCGAGGAGGAAGACGCAGGGGCGTGCAGGGAACACCCGATCCCCTTTGGTAGAAAACGCGTTGAATAGC]

[+] EMBL CF278953             [TTTTTTATTGATAGCGTACACTATGCGCACATTAATTTAATGGTGGAATAGTCATTGTCGTTAAAACAATTAACAACGGCGCAATATCACCATCGTTAAATAAATAACAAGGACACTATCGTGGATTCTATATTTTGAAGAAAGTTTCACTCAAAAGTGAATCAGATATGAATCAGTACTGCAAGAAATAAGTATGTCTTGTCATATCAATTTTTTTTACCACGCAAAGAAATATTTTATTTACCGCTCTAATGGATCGTTGGATGTATTTTGACTGCCTTGGCCATCTGGTGNGTGTTGGTACGGCACCCATCCAAGCTCCATATGGGGAAACAAATGAATTAATCTGCAGTGGAGGTGCTGTCCACCAACTTGGAACAGCCATGGCTTCACCAGACAAAGGGAAGGCGACGCCGGGCTTCA CTACACCA CCCCACCAAGGAACGCCGGGAGGCAAAGCTTGAGGCGTTGGAGGAGCAATCTCCCGCTTGGATCTATGGCTCATCACTTGAGGTTTGAGGA                                                                                                                                                                                                                                                     ]
[-] EMBL CB679766             [                                                TAGTCATTGTCGTTAAAACAATTAACAACGGCGCAATATCACCATCGTTAAATAAATAACAAGGACACTATCGTGGATTCTATATTTTGAAGAAAGTTTCACTCAAAAGTGAATCAGATATGAATCAGTACTGCAAGAAATAAGTATGTCTTGTCATATCAATTTTTTTTACCACGCAAAGAAATATTTTATTTACCGCTCTAATGGATCGTTGGATGTATTTTGACTGCCTTGGCCATCTGGTG GTGTTGGTACGGCACCCATCCAAGCTCCATATGGGGAAACAAATGAATTAATCTGCAGTGGAGGTGCTGTCCACCAACTTGGAACAGCCATGGCTTCACCAGACAAAGGGAAGGCGACGCCGGGCTTCA CTACACCA CCCCACCAAGGAACGCCGGGAGGCAAAGCTTGAGGCGTTGGAGGAGCAATCTCCCGCTTGGATCTATGGCTCATCACTTGAGGTTTGAGGAGATATGAGGATTAGGGATGAGTTTCAGGAAGACTGAGCGACAAGCGGTGGATTTATGGATTAGGGAAAGAACT                                                                                                                                                                            ]
[+] EMBL CA761258             [                                                                                                                        tttttTTTTTTTTTTGGAAGAAAGTTTCACTCAAAAGTGAATCAAATATGAATCAGTACTGCAAGAAATAAGTATGTCTTGCCATATCAA TTTTTTTACCACGCAAAGAAATATTTTATTTACCGCTCTAATGGATCGTTGGATGTATTTTGACTGCCTTGGCCATCTGGTG GGGTTGGTACGGCACCCATCCAAGCTCCATATGGGGAAACAAATGAATTACTCTGCAGTGGAGGTGCTGTCCACCAACTTGGAACAGCCATGGCTTCACCAGACAGAGGGAAGGCGACGCCGGGCTTCA CTACACCA CCCCACCAAGGAACGCCGGGAGGCAAAGCTTGAGGCGTTGGAGGAGCAATCTCCCGCTTGGATCTATGGCTCATCACTTGAGGTTTGAGGAGATATGAGGATTAGGGATGAGTTTCAGGAAGACTGAGCGACAAGCGGTGGATTTATGGATTAGGGGCA AACTTGGCTTGGGTCTACCGCGGGAATAAGAGGGTGATTTGGCGCATAAACTACGCGAGAAGATTAGCAGCCATGGGGATTTGG                                                                                            ]
[-] EMBL AA749728             [                                                                                                                                                                                                                     TTTTTACCACGNNAAGAAANATTTTATTTACNGCTCTAATGGATNGTTGGATGTATTTTGANTGCCTTGGCNATCTGGTG GTGTTGGTACGGNNCCCATCNAAGNTCCATATGGGGAAACAAATGAATTACTCTGCAGTGGAGGTGCTGTCCACCAACTTGGAACAGCCATGGCT                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL AU092595             [                                                                                                                                                                                                                                                                                                                                                          CTGCAGTGGA GTGCTGTCCACCAACTTGGAACA CCATGGCTTCACCAGACAAAGGGAA GCGACGCCGGGCTTCA CTACACCA CCCCACCAAGGAACGCCGGGAGGCAAAGCTTGAGGCGTTGGAGGAGCAATCTCCCGCTTGGATCTATGGCTCATCACTTGAGGTTTGAGGAGATATGAGGATTAGGGATGAGTTTCAGGAAGACTGAGCGACAAGCGGTGGATTTATGGATTAGGGGCA AACTTGGCTTGGGTCTACCGCGGGAATAAGAGGGTGATTTGGCGCATAAACTACGCGGGAAGATTAGCAGCCATGGGGATTTGGCGCCCTAGAGAAGAGGAGAGCGCGCGAGGAGGAAGACGCAGGGGCGTGCAGGGAACACCCGATCCCCTTTGG                    ]
[-] EMBL CF278954             [                                                                                                                                                                                                                                                                                                                                                                              ACCAACTTGGAACAGCCATGGCTTCACCAGACAAAGGGAAGGCGACGCCGGGCTTCA CTACACCA CCCCACCAAGGAACGCCGGGAGGCAAAGCTTGAGGCGTTGGAGGAGCAATCTCCCGCTTGGATCTATGGCTCATCACTTGAGGTTTGAGGAGATATGAGGATTAGGGATGAGTTTCAGGAAGACTGAGCGACAAAAAAAGGATTTATGGATTAGGGGCA AACTTGGCTTGGGTCTACCAAAAAAATAAGAGGGTGATTTGGCGCATAAACTACGCGGGAAGATTAGCAGCCATGGGGATTTGGCGCCCTAGAGAAGAGGAGAGCGCGCGAGGAGGAAGACGCAGGGGCGTGCAGGGAACACCCGATCCCCGTGAATAGAAAACGCGTTGAATAGC]
[-] EMBL C27663               [                                                                                                                                                                                                                                                                                                                                                                                                                AGGGAAAGCGACGCGGGCCTTCACCTACACCACCCCCACCAAGNAACCCCGGNAGGCAAAGCTTGAGCCGTTGGAGGAGCAATCTCCCGCTTGGATCTATGGCTCATCACTTGAGGTTTGAGGAGATATGAGGATTAGGGATGAGTTTCAGGAAGACTGAGCGACAAGCGGTGGATTTATGGATTAGGGGCA AACTTGGCTTGGGTCTACCGCGGGAATAAGAGGGTGATTTGGCGCATAAACTACGCGGGAAGATTAGCAGCCATGGGGATTTGGCGCCCTAGAGAAGAGGAGAGCGCGCGAGGAGGAAGAC CAGGGGCGTGCAGGGAACACCCGATCCCCTTTGG                    ]




>consensus_9973#0
TTTTTTATTGATAGCGTACACTATGCGCACATTAATTTAATGGTGGAATAGTCATTGTCG
TTAAAACAATTAACAACGGCGCAATATCACCATCGTTAAATAAATAACAAGGACACTATC
GTGGATTCTATATTTTGAAGAAAGTTTCACTCAAAAGTGAATCAGATATGAATCAGTACT
GCAAGAAATAAGTATGTCTTGTCATATCAATTTTTTTTACCACGCAAAGAAATATTTTAT
TTACCGCTCTAATGGATCGTTGGATGTATTTTGACTGCCTTGGCCATCTGGTGGTGTTGG
TACGGCACCCATCCAAGCTCCATATGGGGAAACAAATGAATTAATCTGCAGTGGAGGTGC
TGTCCACCAACTTGGAACAGCCATGGCTTCACCAGACAAAGGGAAGGCGACGCCGGGCTT
CACTACACCACCCCACCAAGGAACGCCGGGAGGCAAAGCTTGAGGCGTTGGAGGAGCAAT
CTCCCGCTTGGATCTATGGCTCATCACTTGAGGTTTGAGGAGATATGAGGATTAGGGATG
AGTTTCAGGAAGACTGAGCGACAAGCGGTGGATTTATGGATTAGGGGCAAACTTGGCTTG
GGTCTACCGCGGGAATAAGAGGGTGATTTGGCGCATAAACTACGCGGGAAGATTAGCAGC
CATGGGGATTTGGCGCCCTAGAGAAGAGGAGAGCGCGCGAGGAGGAAGACGCAGGGGCGT
GCAGGGAACACCCGATCCCCTTTGGTAGAAAACGCGTTGAATAGC
clustalw multiple alignements is not computed in this case