cluster # 9974

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Oryza sativa
cluster # 9974 cluster # 9974 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9974#0 length = 1567 sequences # 5

consensus_9974#1 length = 689 sequences # 1
consensus_9974#2 length = 152 sequences # 1

consensusID : consensus_9974#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1567
fasta sequence

                              [AGAACTCACTGCTCAGTTACGTTCTATAATGAAGGAACTATCAAATGTCAAACATGACGCACAAACTAAAGGCAGGATATTAGAACAGTTATTCTCCGGAATTTTCAGTGAGCTTAAAAACTTCAGTGAGCCAATTCCATCTCCATTAACACCGACTGTCCTCCTTGACGGAATTGTGCCTGAAGAGTCATTGGTATTCAAAAGTGCTAATTATCCATTGTGTATAGCATTTAGTACTGTGAATGGGGGTACATCGAAAATGATTTTCAAGAAGGGAGATAATCTCCGCAAGGATCAGTTGGTTATTCAAATAATCTCTTTGATGGATCGGTTGCTCAAGTCAGATAATCTAGACTTACACCTTACTCCTTATCAAGTTCTTGCGACTGGTCTAGAAGAAGGGTTGGTTGAGTTTATTCCTTCAATTTCTGTTGCAAAGATTATACAAAAAACGGGCAGTATAGAAAGTTACCTACAAAAGTGTAATCCGGATGAAGATGGCCCTTTTGGTATAACTGCCCAATGTTTGGAAACTTTTATAAAAAGTTGTGCTGGCTACAGTGTCATTACATACATACTGGGGATTGGAGACAGGCATCTTGACAACCTTCTCCTACAAGACGATGGAAGACTTTTCCATGTTGACTTCTCGTATATGCTTGGGGAACAACCACATCGATTTGCACCACCATCACCACCGATGAAATTATGCAAAGAAATGGTTGAGGCCATGGGTGGTACTGAAAGTGAATACTATGCAAGATTCAAGTCCTACTGTTGCGAGGCATACAACATATTACGAAAGTCCAGCAACCTCATACTGAATCTTTTTTATCTGATGACTGGATCAAATATTGAGAGTATCACAGACAAAGGGACTTCTAAGCTACAGCAAAATTTCCGGTTGGATCTAGACGACGAGGATGCTATACATTTTCTCCAGGGTCTTATCAACGAAAGTATCAGTGCTTTCTTCCCTCAAGTGGTTGAGACCATCCATCAATGGGCACAGTCTAGGCGTTAAAAACATTTATAATATTTGGTCAAGACATTTATAATATTTGGTCTGTACATGTCAGTTTTGAAGTTCTTTTCTGTTACGGTGACATCATATTTT-CTTCGATAACTACAAGGCTCTTAA-CTGCATTCTACAACATAATGTGTATTTTATGGTGATGCAACAGATCTTCTGTTATCATCAGTTACAAAGGAAACTGCCATCTCTGGATGCTGGTCTTATTCATATATCTACCAAAAGCACTACACATGTTGCCATGTAGTTGGAAGAGAACTTCAACCCGTGGGATCAATATTTAGGGTATAATGTCACTCATCCGCAATGTTGGATTTGGAGTG-CCCTGGAGAACAGAGTAAAAAGAGAAGGATGCTGCTATATGTTCATTAGTAGACGATTCTTATAACTAGCTTCTGATTAGCAGTCAGTTTTGTACAGTACCATCTATACTAGAATGTCTATAGTTATATGAAGTTACTTACTAAACCGATAGCATATTGTCTTGTGTATAACTACTGTCCCAAGGAAAATTTCAAATTTACTTAAAAAAAA]

[+] EMBL AK111577             [AGAACTCACTGCTCAGTTACGTTCTATAATGAAGGAACTATCAAATGTCAAACATGACGCACAAACTAAAGGCAGGATATTAGAACAGTTATTCTCCGGAATTTTCAGTGAGCTTAAAAACTTCAGTGAGCCAATTCCATCTCCATTAACACCGACTGTCCTCCTTGACGGAATTGTGCCTGAAGAGTCATTGGTATTCAAAAGTGCTAATTATCCATTGTGTATAGCATTTAGTACTGTGAATGGGGGTACATCGAAAATGATTTTCAAGAAGGGAGATAATCTCCGCAAGGATCAGTTGGTTATTCAAATAATCTCTTTGATGGATCGGTTGCTCAAGTCAGATAATCTAGACTTACACCTTACTCCTTATCAAGTTCTTGCGACTGGTCTAGAAGAAGGGTTGGTTGAGTTTATTCCTTCAATTTCTGTTGCAAAGATTATACAAAAAACGGGCAGTATAGAAAGTTACCTACAAAAGTGTAATCCGGATGAAGATGGCCCTTTTGGTATAACTGCCCAATGTTTGGAAACTTTTATAAAAAGTTGTGCTGGCTACAGTGTCATTACATACATACTGGGGATTGGAGACAGGCATCTTGACAACCTTCTCCTACAAGACGATGGAAGACTTTTCCATGTTGACTTCTCGTATATGCTTGGGGAACAACCACATCGATTTGCACCACCATCACCACCGATGAAATTATGCAAAGAAATGGTTGAGGCCATGGGTGGTACTGAAAGTGAATACTATGCAAGATTCAAGTCCTACTGTTGCGAGGCATACAACATATTACGAAAGTCCAGCAACCTCATACTGAATCTTTTTTATCTGATGACTGGATCAAATATTGAGAGTATCACAGACAAAGGGACTTCTAAGCTACAGCAAAATTTCCGGTTGGATCTAGACGACGAGGATGCTATACATTTTCTCCAGGGTCTTATCAACGAAAGTATCAGTGCTTTCTTCCCTCAAGTGGTTGAGACCATCCATCAATGGGCACAGTCTAGGCGTTAAAAACATTTATAATATTTGGTCAAGACATTTATAATATTTGGTCTGTACATGTCAGTTTTGAAGTTCTTTTCTGTTACGGTGACATCATATTTT CTTCGATAACTACAAGGCTCTTAA CTGCATCCTACAACATAATGTGTATTTTATGGTGATGCAACAGATCTTCTGTTATCATCAGTTACAAAGGAAACTGCCATCTCTGGATGCTGGTCTTATTCATATATCTACCAAAAGCACTACACATGTTGCCATGTAGTTGGAAGAGAACTTCAACCCGTGGGATCAATATTTAGGGTATAATGTCACTCATCCGCAATGTTGGATTTGGAGTG CCCTGGAGAACAGAGTAAAAAGAGAAGGATGCTGCTATATGTTCATTAGTAGACGATTCTTATAACTAGCTTCTGATTAGCAGTCAGTTTTGTACAGTACCATCTATACTAGAATGTCTATAGTTATATGAAGTTACTTACTA                                                                    ]
[+] EMBL AK111693             [AGAACTCACTGCTCAGTTACGTTCTATAATGAAGGAACTATCAAATGTCAAACATGACGCACAAACTAAAGGCAGGATATTAGAACAGTTATTCTCCGGAATTTTCAGTGAGCTTAAAAACTTCAGTGAGCCAATTCCATCTCCATTAACACCGACTGTCCTCCTTGACGGAATTGTGCCTGAAGAGTCATTGGTATTCAAAAGTGCTAATTATCCATTGTGTATAGCATTTAGTACTGTGAATGGGGGTACATCGAAAATGATTTTCAAGAAGGGAGATAATCTCCGCAAGGATCAGTTGGTTATTCAAATAATCTCTTTGATGGATCGGTTGCTCAAGTCAGATAATCTAGACTTACACCTTACTCCTTATCAAGTTCTTGCGACTGGTCTAGAAGAAGGGTTGGTTGAGTTTATTCCTTCAATTTCTGTTGCAAAGATTATACAAAAAACGGGCAGTATAGAAAGTTACCTACAAAGGTGTAATACGGATGAAGATGGCCCTTTTGGTATAACTGCCCAATGTTTGGAAACTTTTATAAAAAGTTGTGCTGGCTACAGTGTCATTACATACATACTGGGGATTGGAGACAGGCATCTTGACAACCTTCTCCTACAAGACGATGGAAGACTTTTCCATGTTGACTTCTCGTATATGCTTGGGGAACAACCACATCGATTTGCACCACCATCACCACCGATGAAATTATGCAAAGAAATGGTTGAGGCCATGGGTGGTACTGAAAGTGAATACTATGCAAGATTCAAGTCCTACTGTTGCGAGGCATACAACATATTACGAAAGTCCAGCAACCTCATACTGAATCTTTTTTATCTGATGACTGGATCAAATATTGAGAGTATCACAGACAAAGGGACTTCTAAGCTACAGCAAAATTTCCGGTTGGATCTAGACGACGAGGATGCTATACATTTTCTCCAGGGTCTTATGAACGAAAGTATCAGTGCTTTCTTCCCTCAAGTGGTTGAGACCATCCATCAATGGGCACAGTCTAGGCGTTAAAAACATTTATAATATTTGGTCAAGACATTTATAATATTTGGTCTGTACATGTCAGTTTTGAAGTTCTTTTCTGTTACGGTGACATCATATTTT CTTCGATAACTACAAGGCTCTTA                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA753037             [                                                                                                                                                                                                                                                                                                                                                                                                                            TTTATTCCTTCAATTTCTGTTGCAAAGATTATACAAAAAACGGGCAGTATAGAAAGTTACCTACAAAAGTGTAATCCGGATGAAGATGGCCCTTTTGGTATAACTGCCCAATGTTTGGAAACTTTTATAAAAAGTTGTGCTGGCTACAGTGTCATTACATACATACTGGGGATTGGAGACAGGCATCTTGACAACCTTCTCCTACAAGACGATGGAAGACTTTTCCATGTTGACTTCTCGTATATGCTTGGGGAACAACCACATCGATTTGCACCACCATCACCACCGATGAAATTGTGCAAAGAAATGGTTGAGGCCATGGGTGGTACTGAAAGTGAATACTATGCAAGATTCAAGTCCTACTGTTGCGAGGCATACAACATATTACGAAAGTCCAGCAACCTCATACTGAATCTTTTTTATCTGATGACTGGATCAAATATTGAGAGTATCACAGACAAAGGGACTTCTAAGCTACAGCAAAATTTCCGGTTGGATCTAGACGACGAGGATGCTATACATTTTCTCCAGGGTCTTATCAACGAAAGTATCAGTGCTTTCTTCCCTCAAGTGGTTGAGACCATCCATCAATGGGCACAGTCTAGGCGTTAAAAACATTTATAATATTTGGTCAAGACATNTATAATATTTGGTCTGTAC  GTCAGTNTTGAAGTTCTTTTCTGTTACGGTGACATCATATTTTCCTTCGATAACTACAAGGCTCTTAACCTGCATTCTACAACATAATGTGTATTTTAntg                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AA752364             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TACATTTTCTCCAGGGTCTTATCAACGAAAGTATCAGTGCTTTCTTCCCTCAAGTGGTTGAGACCATCCATCAATGGGCACAGTCTAGGCGTTAAAAACATTTATAATATTTGGTCAAGACATTTATAATATTTGGTCTGTACATGTCAGTTTTGAAGTTCTTTTCTGTTACGGTGACATCATATTTT CTTCGATAACTACGAGGCTCTTAA CTGCATTCTACAACATAATGTGTATTTTATGGTGATGCAACAGATCTTCTGTTATCAT                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM419575             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGTGACATCATATTTT CTTCGATAACTACAAGGCTCTTAA CTGCATTCTACAACATAATGTGTATTTTATGGTGATGCAACAGATCTTCTGTTATCATCAGTTACAAAGGAAACTGCCATCTCTGGATGCTGGTCTTATTCATATATCTACC AAAGCACTACACATGTTGCCATGTAGTTGGAAGAGAACTTCAACCCGTGGGATCAATATTTAGGGTATAATGTCACTCATCCGCAATGTTGGATTTGGAGTGCCCCTGGAGAACAGAGTAAAAAGAGAAGGATGCTGCTATATGTTCATTAGTAGACGATTCTTATAACTAGCTTCTGATTAGCAGTCAGTTTTGTACAGTACCATCTATACTAGAATGTCTATAGTTATATGAAGTTACTTACTAAACCGATAGCATATTGTCTTGTGTATAACTACTGTCCCAAGGAAAATTTCAAATTTACTTAAAAAAAA]




>consensus_9974#0
AGAACTCACTGCTCAGTTACGTTCTATAATGAAGGAACTATCAAATGTCAAACATGACGC
ACAAACTAAAGGCAGGATATTAGAACAGTTATTCTCCGGAATTTTCAGTGAGCTTAAAAA
CTTCAGTGAGCCAATTCCATCTCCATTAACACCGACTGTCCTCCTTGACGGAATTGTGCC
TGAAGAGTCATTGGTATTCAAAAGTGCTAATTATCCATTGTGTATAGCATTTAGTACTGT
GAATGGGGGTACATCGAAAATGATTTTCAAGAAGGGAGATAATCTCCGCAAGGATCAGTT
GGTTATTCAAATAATCTCTTTGATGGATCGGTTGCTCAAGTCAGATAATCTAGACTTACA
CCTTACTCCTTATCAAGTTCTTGCGACTGGTCTAGAAGAAGGGTTGGTTGAGTTTATTCC
TTCAATTTCTGTTGCAAAGATTATACAAAAAACGGGCAGTATAGAAAGTTACCTACAAAA
GTGTAATCCGGATGAAGATGGCCCTTTTGGTATAACTGCCCAATGTTTGGAAACTTTTAT
AAAAAGTTGTGCTGGCTACAGTGTCATTACATACATACTGGGGATTGGAGACAGGCATCT
TGACAACCTTCTCCTACAAGACGATGGAAGACTTTTCCATGTTGACTTCTCGTATATGCT
TGGGGAACAACCACATCGATTTGCACCACCATCACCACCGATGAAATTATGCAAAGAAAT
GGTTGAGGCCATGGGTGGTACTGAAAGTGAATACTATGCAAGATTCAAGTCCTACTGTTG
CGAGGCATACAACATATTACGAAAGTCCAGCAACCTCATACTGAATCTTTTTTATCTGAT
GACTGGATCAAATATTGAGAGTATCACAGACAAAGGGACTTCTAAGCTACAGCAAAATTT
CCGGTTGGATCTAGACGACGAGGATGCTATACATTTTCTCCAGGGTCTTATCAACGAAAG
TATCAGTGCTTTCTTCCCTCAAGTGGTTGAGACCATCCATCAATGGGCACAGTCTAGGCG
TTAAAAACATTTATAATATTTGGTCAAGACATTTATAATATTTGGTCTGTACATGTCAGT
TTTGAAGTTCTTTTCTGTTACGGTGACATCATATTTTCTTCGATAACTACAAGGCTCTTA
ACTGCATTCTACAACATAATGTGTATTTTATGGTGATGCAACAGATCTTCTGTTATCATC
AGTTACAAAGGAAACTGCCATCTCTGGATGCTGGTCTTATTCATATATCTACCAAAAGCA
CTACACATGTTGCCATGTAGTTGGAAGAGAACTTCAACCCGTGGGATCAATATTTAGGGT
ATAATGTCACTCATCCGCAATGTTGGATTTGGAGTGCCCTGGAGAACAGAGTAAAAAGAG
AAGGATGCTGCTATATGTTCATTAGTAGACGATTCTTATAACTAGCTTCTGATTAGCAGT
CAGTTTTGTACAGTACCATCTATACTAGAATGTCTATAGTTATATGAAGTTACTTACTAA
ACCGATAGCATATTGTCTTGTGTATAACTACTGTCCCAAGGAAAATTTCAAATTTACTTA
AAAAAAA

consensusID : consensus_9974#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 689
fasta sequence

                              [CCTGTATAGGTGAGCGAGGACGAGGCAAGGGGGTACGAAATTCCACAACCCTCCCACTGAATCCTTTTTTTATGATCCCTGGATCAAATATTCAGAGTATTCCAGACAAAGGGCCTTCTTAGCTCCAGCAAAATTCTCGGTTGGATCTAGACGACGAGGATGCTATACATCTTTTCCAGGGTCTTATCAACGAAAGTATCAGTGCTTTCTTCCCTCAAGTGGTTGAGCCCATCCATCAATGGGCACAGTCTAGGCGTTAAAAACATTTATAATATTTGGTCAAGACATTTATAGTATTTGATCTTCGGTTATCATCAGTTACAAAGGAAACTGCCATCTCTGGATGCTGGTCTTATTCATATATCTACCAAAAGCCCTACACATGTTGCCATGTAGTTGGAAGAGAACTTCAACCCGTGGGATCAATATTTAGGGTATAATGTCACTCATCCGCAATGTTGGATTTGGAGTGCCCTGGAGAACAGAGTAAAAAGAGAAGGATGCTGCTATATGTTCATTAGTAGACGATTCTTATAACTAGCTTCTGATTAGCAGTCAGTTTTGTACGGTACCATCTATACTAGAATGTCTATAGTTATATGAAGTTACTTACTAAACCGATAGCATATTGTCTTGTGTATAACTACTGTCCAAAGGAAAATTTCAAATTTCCTTAAAAAAAAAAAAAA]

[-] EMBL CA762800             [CCTGTATAGGTGAGCGAGGACGAGGCAAGGGGGTACGAAATTCCACAACCCTCCCACTGAATCCTTTTTTTATGATCCCTGGATCAAATATTCAGAGTATTCCAGACAAAGGGCCTTCTTAGCTCCAGCAAAATTCTCGGTTGGATCTAGACGACGAGGATGCTATACATCTTTTCCAGGGTCTTATCAACGAAAGTATCAGTGCTTTCTTCCCTCAAGTGGTTGAGCCCATCCATCAATGGGCACAGTCTAGGCGTTAAAAACATTTATAATATTTGGTCAAGACATTTATAGTATTTGATCTTCGGTTATCATCAGTTACAAAGGAAACTGCCATCTCTGGATGCTGGTCTTATTCATATATCTACCAAAAGCCCTACACATGTTGCCATGTAGTTGGAAGAGAACTTCAACCCGTGGGATCAATATTTAGGGTATAATGTCACTCATCCGCAATGTTGGATTTGGAGTGCCCTGGAGAACAGAGTAAAAAGAGAAGGATGCTGCTATATGTTCATTAGTAGACGATTCTTATAACTAGCTTCTGATTAGCAGTCAGTTTTGTACGGTACCATCTATACTAGAATGTCTATAGTTATATGAAGTTACTTACTAAACCGATAGCATATTGTCTTGTGTATAACTACTGTCCAAAGGAAAATTTCAAATTTCCTTAAAAAAAAAAAAAA]




>consensus_9974#1
CCTGTATAGGTGAGCGAGGACGAGGCAAGGGGGTACGAAATTCCACAACCCTCCCACTGA
ATCCTTTTTTTATGATCCCTGGATCAAATATTCAGAGTATTCCAGACAAAGGGCCTTCTT
AGCTCCAGCAAAATTCTCGGTTGGATCTAGACGACGAGGATGCTATACATCTTTTCCAGG
GTCTTATCAACGAAAGTATCAGTGCTTTCTTCCCTCAAGTGGTTGAGCCCATCCATCAAT
GGGCACAGTCTAGGCGTTAAAAACATTTATAATATTTGGTCAAGACATTTATAGTATTTG
ATCTTCGGTTATCATCAGTTACAAAGGAAACTGCCATCTCTGGATGCTGGTCTTATTCAT
ATATCTACCAAAAGCCCTACACATGTTGCCATGTAGTTGGAAGAGAACTTCAACCCGTGG
GATCAATATTTAGGGTATAATGTCACTCATCCGCAATGTTGGATTTGGAGTGCCCTGGAG
AACAGAGTAAAAAGAGAAGGATGCTGCTATATGTTCATTAGTAGACGATTCTTATAACTA
GCTTCTGATTAGCAGTCAGTTTTGTACGGTACCATCTATACTAGAATGTCTATAGTTATA
TGAAGTTACTTACTAAACCGATAGCATATTGTCTTGTGTATAACTACTGTCCAAAGGAAA
ATTTCAAATTTCCTTAAAAAAAAAAAAAA

consensusID : consensus_9974#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 152
fasta sequence

                              [AAACGATTTCGCCCTTGGACACTGACATGGACTAAGGAGTAGAAACATATTGTCTTGTGTATAACTACTGTCCAAAGGAAAATTTCAAATTTACTTAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF338178             [AAACGATTTCGCCCTTGGACACTGACATGGACTAAGGAGTAGAAACATATTGTCTTGTGTATAACTACTGTCCAAAGGAAAATTTCAAATTTACTTAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_9974#2
AAACGATTTCGCCCTTGGACACTGACATGGACTAAGGAGTAGAAACATATTGTCTTGTGT
ATAACTACTGTCCAAAGGAAAATTTCAAATTTACTTAANAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9974#0      AGAACTCACTGCTCAGTTACGTTCTATAATGAAGGAACTATCAAATGTCAAACATGACGC 60
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      ACAAACTAAAGGCAGGATATTAGAACAGTTATTCTCCGGAATTTTCAGTGAGCTTAAAAA 120
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      CTTCAGTGAGCCAATTCCATCTCCATTAACACCGACTGTCCTCCTTGACGGAATTGTGCC 180
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      TGAAGAGTCATTGGTATTCAAAAGTGCTAATTATCCATTGTGTATAGCATTTAGTACTGT 240
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      GAATGGGGGTACATCGAAAATGATTTTCAAGAAGGGAGATAATCTCCGCAAGGATCAGTT 300
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      GGTTATTCAAATAATCTCTTTGATGGATCGGTTGCTCAAGTCAGATAATCTAGACTTACA 360
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      CCTTACTCCTTATCAAGTTCTTGCGACTGGTCTAGAAGAAGGGTTGGTTGAGTTTATTCC 420
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      TTCAATTTCTGTTGCAAAGATTATACAAAAAACGGGCAGTATAGAAAGTTACCTACAAAA 480
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      GTGTAATCCGGATGAAGATGGCCCTTTTGGTATAACTGCCCAATGTTTGGAAACTTTTAT 540
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      AAAAAGTTGTGCTGGCTACAGTGTCATTACATACATACTGGGGATTGGAGACAGGCATCT 600
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      TGACAACCTTCTCCTACAAGACGATGGAAGACTTTTCCATGTTGACTTCTCGTATATGCT 660
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      TGGGGAACAACCACATCGATTTGCACCACCATCACCACCGATGAAATTATGCAAAGAAAT 720
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      GGTTGAGGCCATGGGTGGTACTGAAAGTGAATACTATGCAAGATTCAAGTCCTACTGTTG 780
consensus_9974#1      ---------------------------------------------CCTGTATAGGTGA-G 14
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      CGAGGC--ATACAACATATTACGAAAGTCCAGCAACCTCATACTGAATCTTTTTTATCTG 838
consensus_9974#1      CGAGGACGAGGCAAGGGGGTACGAAATTCCACAACCCTCCCACTGAATCCTTTTTTTATG 74
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      ATGACTGGATCAAATATTGAGAGTATCACAGACAAAGGGACTTCTAAGCTACAGCAAAAT 898
consensus_9974#1      ATCCCTGGATCAAATATTCAGAGTATTCCAGACAAAGGGCCTTCTTAGCTCCAGCAAAAT 134
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      TTCCGGTTGGATCTAGACGACGAGGATGCTATACATTTTCTCCAGGGTCTTATCAACGAA 958
consensus_9974#1      TCTCGGTTGGATCTAGACGACGAGGATGCTATACATCTTTTCCAGGGTCTTATCAACGAA 194
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      AGTATCAGTGCTTTCTTCCCTCAAGTGGTTGAGACCATCCATCAATGGGCACAGTCTAGG 1018
consensus_9974#1      AGTATCAGTGCTTTCTTCCCTCAAGTGGTTGAGCCCATCCATCAATGGGCACAGTCTAGG 254
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      CGTTAAAAACATTTATAATATTTGGTCAAGACATTTATAATATTTGGTCTGTACATGTCA 1078
consensus_9974#1      CGTTAAAAACATTTATAATATTTGGTCAAGACATTTATAGTATTTG-------------- 300
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      GTTTTGAAGTTCTTTTCTGTTACGGTGACATCATATTTTCTTCGATAACTACAAGGCTCT 1138
consensus_9974#1      ------------------------------------------------------------
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      TAACTGCATTCTACAACATAATGTGTATTTTATGGTGATGCAACAGATCTTCTGTTATCA 1198
consensus_9974#1      ----------------------------------------------ATCTTCGGTTATCA 314
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      TCAGTTACAAAGGAAACTGCCATCTCTGGATGCTGGTCTTATTCATATATCTACCAAAAG 1258
consensus_9974#1      TCAGTTACAAAGGAAACTGCCATCTCTGGATGCTGGTCTTATTCATATATCTACCAAAAG 374
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      CACTACACATGTTGCCATGTAGTTGGAAGAGAACTTCAACCCGTGGGATCAATATTTAGG 1318
consensus_9974#1      CCCTACACATGTTGCCATGTAGTTGGAAGAGAACTTCAACCCGTGGGATCAATATTTAGG 434
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      GTATAATGTCACTCATCCGCAATGTTGGATTTGGAGTGCCCTGGAGAACAGAGTAAAAAG 1378
consensus_9974#1      GTATAATGTCACTCATCCGCAATGTTGGATTTGGAGTGCCCTGGAGAACAGAGTAAAAAG 494
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      AGAAGGATGCTGCTATATGTTCATTAGTAGACGATTCTTATAACTAGCTTCTGATTAGCA 1438
consensus_9974#1      AGAAGGATGCTGCTATATGTTCATTAGTAGACGATTCTTATAACTAGCTTCTGATTAGCA 554
consensus_9974#2      ------------------------------------------------------------
                                                                                  

consensus_9974#0      GTCAGTTTTGTACAGTACCATCTATACTAGAATGTCTATAGTTATATGAAGTTACTTACT 1498
consensus_9974#1      GTCAGTTTTGTACGGTACCATCTATACTAGAATGTCTATAGTTATATGAAGTTACTTACT 614
consensus_9974#2      -----------------------AAACGATTTCGCCCTTGGACAC-TGACATGGACTAAG 36
                                             * ** *    * *  * *  *  ***  *    **  

consensus_9974#0      AAACCGATAGCATATTGTCTTGTGTATAACTACTGTCCCAAGGAAAATTTCAAATTTACT 1558
consensus_9974#1      AAACCGATAGCATATTGTCTTGTGTATAACTACTGTCCAAAGGAAAATTTCAAATTTCCT 674
consensus_9974#2      GAGTAGA-AACATATTGTCTTGTGTATAACTACTGTCCAAAGGAAAATTTCAAATTTACT 95
                       *   ** * **************************** ****************** **

consensus_9974#0      TAAAAAAAA------------------------------------------------ 1567
consensus_9974#1      TAAAAAAAAAAAAAA------------------------------------------ 689
consensus_9974#2      TAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 152
                      *** *****