| These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs : 
 consensusID : consensus_9977#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1400 fasta sequence 
                              [CACACGCAGAAGAAGAGAGAGAAAGAGAGAGAGAGAGAAGGCCCAAACACCACCAAACCCTAGCCCTCACCTCGCCCCGCCGTCCATGGAGGCGGCGCTGTGACCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGTGGCGTGCGGAACCGATAGGGCGGAGGGGATGACCGCCAGATCGGGCGACCCCGGCGTCTCGCCGGAGTCGTCGTCTGCGGCGGCGGCGGCGGCGGGGTCCGGGGGCGGGGAGATCTGGGGGACGTCGGAGGACCTGCTCCTGGCGTGCGCCGTGAGCCGCCATGGGACGGCGAGCTGGGACGCGGTGGCGAAGGAGATGCAGTCGAGGTGCCCTTCCGCCGCCGTGTTCACCCCCACCACCTGCCGCCTCCGGTTCCGCGTCCTCCACCGCCGGTTCTCCGGCGGCGTCACCGCCGAGAACGAGGACGCCGACGGCGGCGAGGAGGAGGAAGAGGCCGACGCCGCCGCCGTCGCCGGCTGGGTGGAGGAACTCCGCGAGCTGCGCGTCGCCGAGCTCCGCCGCGAGGTCGAGAAATACGATCTCTCGATCGGGTCGTTGCAATCAAAAGTGAAACGGCTCAAGGAGGAGAGGGAAAAGAGCATCTCCGGCGAGACGAAGCCGCCGCCGGCGGCGGCGGC-GGTGAAGGAGGAGGAGGAGGATGTACGGAAGGGATCACCGGAGGAGGCCGGCGCCGTGGAGGACAGGGTCTCCGGCCACGAATCCGGCCGGTCATGCAAGGAGTCGAACTCGTCAGATCTGAAGCGGCCGGAGAACGACCCCGCGGTCGCCGACGACGACGACCGGGAGGCGGAGGAGGAGGAGGAGGCGGCGGCGGCGCCCGCGGCCGGCGACATCGCCGTGAAGGAGGAGGCG-TCGGGCGAGTCGGTGGCTGGGTCGAAGGAGGCGGACGTCGAGAAGGAGAGCAGCGACGTGCAGAGCTCCGCCAGCCCGTCCCGCCGCCGGCGACGGAAGGGCGGAGGCGGCGGCGAATAGGCGGAGGCGGCGTCGCCGTCGGTGTCCGTGCCCCTCCCCGCCGCCGAGGCCGAGCCGCTCGTCGCCTTCCTCGAGTCGGTCCGGACCAGCAAGGCCGGCGCCGTGTTCGAGCGGCGGCTCGATAGCCAGGATGGGGAGAGGTACAGTGGCACGATCAGGCGCCATGTGGACCTGGAGACGGTCAGGTCGAGGCTGGTGGGTGCAACGGCGGCGGCGGCGGCGGCGGCGTGCTACGCGTCGGCGTCCGAGTTCTACCGCGACATGATGCTGCTCTGCGCCAACGCGCTCGTCTTCTTCCCGCGCGGCTCGCCGGAGCACGCCGCCGCGCTCCAGCTGCGCGCGCTCGTCTCCAAGCAGGTCTCCAAGGACCGGCAGCCTCACGCCTGGGCGA]
[+] EMBL AK101254             [CACACGCAGAAGAAGAGAGAGAAAGAGAGAGAGAGAGAAGGCCCAAACACCACCAAACCCTAGCCCTCACCTCGCCCCGCCGTCCATGGAGGCGGCGCTGTGACCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGTGGCGTGCGGAACCGATAGGGCGGAGGGGATGACCGCCAGATCGGGCGACCCCGGCGTCTCGCCGGAGTCGTCGTCTGCGGCGGCGGCGGCGGCGGGGTCCGGGGGCGGGGAGATCTGGGGGACGTCGGAGGACCTGCTCCTGGCGTGCGCCGTGAGCCGCCATGGGACGGCGAGCTGGGACGCGGTGGCGAAGGAGATGCAGTCGAGGTGCCCTTCCGCCGCCGTGTTCACCCCCACCACCTGCCGCCTCCGGTTCCGCGTCCTCCACCGCCGGTTCTCCGGCGGCGTCACCGCCGAGAACGAGGACGCCGACGGCGGCGAGGAGGAGGAAGAGGCCGACGCCGCCGCCGTCGCCGGCTGGGTGGAGGAACTCCGCGAGCTGCGCGTCGCCGAGCTCCGCCGCGAGGTCGAGAAATACGATCTCTCGATCGGGTCGTTGCAATCAAAAGTGAAACGGCTCAAGGAGGAGAGGGAAAAGAGCATCTCCGGCGAGACGAAGCCGCCGCCGGCGGCGGCGGC GGTGAAGGAGGAGGAGGAGGATGTACGGAAGGGATCACCGGAGGAGGCCGGCGCCGTGGAGGACAGGGTCTCCGGCCACGAATCCGGCCGGTCATGCAAGGAGTCGAACTCGTCAGATCTGAAGCGGCCGGAGAACGACCCCGCGGTCGCCGACGACGACGACCGGGAGGCGGAGGAGGAGGAGGAGGCGGCGGCGGCGCCCGCGGCCGGCGACATCGCCGTGAAGGAGGAGGCG TCGGGCGAGTCGGTGGCTGGGTCGAAGGAGGCGGACGTCGAGAAGGAGAGCAGCGACGTGCAGAGCTCCGCCAGCCCGTCCCGCCGCCGGCGACGGAAGGGCGGAGGCGGCGGCGAAGTGGCGGAGGCGGCGTCGCCGTCGGTGTCCGTGCCCCTCCCCGCCGCCGAGGCCGAGCCGCTCGTCGCCTTCCTCGAGTCGGTCCGGACCAGCAAGGCCGGCGCCGTGTTCGAGCGGCGGCTCGATAGCCAGGATGGGGAGAGGTACAGTGGCACGATCAGGCGCCATGTGGACCTGGAGACGGTCAGGTCGAGGCTGGTGGGTGCAACGGCGGCGGCGGCGGCGGCGGCGTGCTACGCGTCGGCGTCCGAGTTCTACCGCGACATGATGCTGCTCTGCGCCAACGCGCTCGTCTTCTTCCCGCGCGGCTCGCCGGAGCACGCCGCCGCGCTCCAGCTGCGCGCGCTCGTCTCCAAGCAGGTCTCCAAGGACCGGCAGCCTCACGCCTGGGCGA]
[+] EMBL AU183902             [                                                                                                                                                                                                                                                            GGGGACGTCGGAGGACCTGCTCCTGGCGTGCGCCGTGAGCCGCCATGGGACGGCGAGCTGGGACGCGGTGGCGAAGGAGATGCAGTCGAGGTGCCCTTCCGCCGCCGTGTTCACCCCCACCACCTGCCGCCTCCGGTTCCGCGTCCTCCACCGCCGGTTCTCCGGCGGCGTCACCGCCGAGAACGAGGACGCCGACGGCGGCGAGGAGGAGGAAGAGGCCGACGCCGCCGCCGTCGCCGGCTGGGTGGAGGAACTCCGCGAGCTGCGCGTCGCCGAGCTCCGCCGCGAGGTCGAGAAATACGATCTCTCGATCGGGTCGTTGCAATCAAAAGTGAAACGGCTCAAGGAGGAGAGGGAAAAGAGCATCTCCGGCGAGACGAAGCCGCCGCCGGCGGCGGCGGCGGGTGAAGGAGGAGGAGGAGGATGTCCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB672903             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATCTCCGGCGAGACGAAGCCGCCGCCGGCGGCGGCGGC GGTGAAGGAGGAGGAGGAGGATGTACGGAAGGGATCACCGGAGGAGGCCGGCGCCGTGGAGGACAGGGTCTCCGGCCACGAATCCGGCCGGTCATGCAAGGAGTCGAACTCGTCAGATCTGAAGCGGCCGGAGAACGACCCCGCGGTCGCCGACGACGACGACCGGGAGGCGGAGGAGGAGGAGGAGGCGGCGGCGGCGCCCGCGGCCGGCGACATCGCCGTGAAGGAGGAGGCG TCGGGCGAGTCGGTGGCTGGGTCGAAGGAGGCGGACGTCGAGAAGGAGAGCAGCGACGTGCAGAGCTCCGCCAGCCCGTCCCGCCGCCGGCGACGGAAGGGCGGAGGCGGCGGCGAATAGGCGGAGGCGGCGTCGCCGTCGGTGTCCGTGCCCCTCCCCGCCGCCGAGGCCGAGCCGCTCGTCGCCTTCCTCGAGTCGGTCCGGACCAGCAAGGCCGGCGCCGTGTTCGAGCGGCGGCTCGATAGCCAGGATGGGGAGAGGTACAGTGGCACGATCAGGCGCCATGTGGACCTGGAGACGGTCAGGTCGAGGCTGGTGGGTGCAACGGCGGCGGCGGCGGCGGCGGCGTGCTACGCGTCGGCGTCCGAGTTCTACCGCGACATGATGCTGCTCTGCGCCAACGCGCTCGTCTTCTTCCCGCGCGGCTCGCCGGAGCACGCCGCCGCGCTCCAGCTGCGCGCGCTCGTCTCCAAGCAGG                                 ]
[+] EMBL CB672901             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATCTCCGGCGAGACGAATCCGCCGCCGGCGGCGGCGGC GGTGAAGGAGGAGGAGGAGGATGTACGGAAGGGATCACCGGAGGAGGCCGGCGCCGTGGAGGACAGGGTCTCCGGCCACGAATCCGGCCGGTCATGCAAGGAGTCTAACTCGTCAGATCTGAAGCGGCCGGAGAACGACCCCGCGGTCGCCGACGACTACCACCGGGAGGCGGAGGAGGATGAGGAGGCGGCGGCGGCGCCCGCGGCCGGCGACATCGCCGTGAAGGAGGAGGCGTTCTGGCGAGTCGGTGGCTGGGTCGAATGAGGCGGACGTCTATAACGAGAGCAGCGACTTGCAGAGCTCCGCCAGCCCGTCCCGCCGCCGGCGACGGAATGGCGGAGGCTGCGGCTAATAGGCGGAGGCGGCGTCGCCGTCGGTGTCCGTGCCCCTCCCCGCCGCCGAGGCCGAGCCGCTCGTCGCCTTCCTCGAGTCGGTCCGGACCAGCAAGGCCGGCGCCGTGTTCGAGCGGCGGCTCGATAGCCAGGATGGGGAGAGGTACAGTGGCACGATCAGGCGCCATGTGGACCTGGAGACGGTCAGGTCGAGGCTGGTGGGTGCAACGGCGGCGGCGGCGGCGGCGGCGTGCTACGCGTCGGCGTCCGAGTTCTACCGCGACATGATGCTGCTCTGCGCCAACGCGCTCGTCTTCTTCCCGCGCGGCTCGCCGGAGCACGCCGCCGCGCTCCAGCTGC                                                      ]
[+] EMBL AU077629             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CACGATCAGGCGCCATGTGGACCTGGAGACGGTCAGGTCGAGGCTGGTGGGTGCAACGGCGGCGGCGGCGGCGGCGGCGTGCTACGCGTCGGCGTCCGAGTTCTACCGCGACATGATGCTGCTCTGCGCCAACGCGCTCGTCTTCTTCCCGCGCGGCTCGCCGGAGCACGCCGCCGCGCTCCAGCTGCGCGCGCTCGTCTCCAAGCAGGTCTCCAAGGACCGGCAGCCTCACGCCGGGGCGA]
consensusID : consensus_9977#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 713 fasta sequence 
                              [GAAGAAGAGAGAGAAAGAGAGAGAGAGAGAAGGCCCAAACACCACCAAACCCTAGCCCTCACCTCGCCCCGCCGTCCATGGAGGCGGCGCTGTGACCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGTGGCGTGCGGAACCGATAGGGCGGAGGGGATGACCGCCAGATCGGGCGACCCCGGCGTCTCGCCGGAGTCGTCGTCTGCGGCGGCGGCGGCGGCGGGGTCCGGGGGCGGGGAGATCTGGGGGACGTCGGAGGACCTGCTCCTGGCGTGCGCCGTGAGCCGCCATGGGACGGCGAGCTGGGACGCGGTGGCGAAGGAGATGCAGTCGAGGTGCCCTTCCGCCGCCGTGTTCACCCCCACCACCTGCCGCCTCCGGTTCCGCGTCCTCCACCGCCGGTTCTCCGGCGGCGTCACCGCCGAGAACGAGGACGCCGACGGCGGCGAGGAGGAGGAAGAGGCCGACGCCGCCGCCGTCGCCGGCTGGGTGGAGGAACTCCGCGAGCTGCGCGTCGCCGAGCTCCGCCGCGAGGTCGAGAAATACGATCTCTCGATCGGGTAAAAACCAGCCCGAAAATAACCAAAAAAAGAAATTAATAAACACCTTGTTTTTTTATTTTAACTTTCGGCTGGTTCGTGCATTGCCCGCCACTCTCCACCGTCTGATGCTGATCGGTCGGCCACAATTTTTTTGGAATAAACTGCTTATTGC]
[+] EMBL AK111116             [GAAGAAGAGAGAGAAAGAGAGAGAGAGAGAAGGCCCAAACACCACCAAACCCTAGCCCTCACCTCGCCCCGCCGTCCATGGAGGCGGCGCTGTGACCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGTGGCGTGCGGAACCGATAGGGCGGAGGGGATGACCGCCAGATCGGGCGACCCCGGCGTCTCGCCGGAGTCGTCGTCTGCGGCGGCGGCGGCGGCGGGGTCCGGGGGCGGGGAGATCTGGGGGACGTCGGAGGACCTGCTCCTGGCGTGCGCCGTGAGCCGCCATGGGACGGCGAGCTGGGACGCGGTGGCGAAGGAGATGCAGTCGAGGTGCCCTTCCGCCGCCGTGTTCACCCCCACCACCTGCCGCCTCCGGTTCCGCGTCCTCCACCGCCGGTTCTCCGGCGGCGTCACCGCCGAGAACGAGGACGCCGACGGCGGCGAGGAGGAGGAAGAGGCCGACGCCGCCGCCGTCGCCGGCTGGGTGGAGGAACTCCGCGAGCTGCGCGTCGCCGAGCTCCGCCGCGAGGTCGAGAAATACGATCTCTCGATCGGGTAAAAACCAGCCCGAAAATAACCAAAAAAAGAAATTAATAAACACCTTGTTTTTTTATTTTAACTTTCGGCTGGTTCGTGCATTGCCCGCCACTCTCCACCGTCTGATGCTGATCGGTCGGCCACAATTTTTTTGGAATAAACTGCTTATTGC]
[+] EMBL AU183244             [                                                                                                                                                                                                                  gGGCGGCGGCGGGGTCCGGGGGCGGGGAGATCTGGGGGACGTCGGAGGACCTGCTCCTGGCGTGCGCCGTGAGCCGCCATGGGACGGCGAGCTGGGACGCGGTGGCGAAGGAGATGCAGTCGAGGTGCCCTTCCGCCGCCGTGTTCACCCCCACCACCTGCCGCCTCCGGTTCCGCGTCCTCCACCGCCGGTTCTCCGGCGGCGTCACCGCCGAGAACGAGGACGC                                                                                                                                                                                                                                                                                     ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9977#0      CACACGCAGAAGAAGAGAGAGAAAGAGAGAGAGAGAGAAGGCCCAAACACCACCAAACCC 60
consensus_9977#1      --------GAAGAAGAGAGAGAAAGAGAGAGAGAGAGAAGGCCCAAACACCACCAAACCC 52
                              ****************************************************
consensus_9977#0      TAGCCCTCACCTCGCCCCGCCGTCCATGGAGGCGGCGCTGTGACCCGCCGCCGCCGCCGC 120
consensus_9977#1      TAGCCCTCACCTCGCCCCGCCGTCCATGGAGGCGGCGCTGTGACCCGCCGCCGCCGCCGC 112
                      ************************************************************
consensus_9977#0      CGTCGTCGTCGTCGTGGCGTGCGGAACCGATAGGGCGGAGGGGATGACCGCCAGATCGGG 180
consensus_9977#1      CGTCGTCGTCGTCGTGGCGTGCGGAACCGATAGGGCGGAGGGGATGACCGCCAGATCGGG 172
                      ************************************************************
consensus_9977#0      CGACCCCGGCGTCTCGCCGGAGTCGTCGTCTGCGGCGGCGGCGGCGGCGGGGTCCGGGGG 240
consensus_9977#1      CGACCCCGGCGTCTCGCCGGAGTCGTCGTCTGCGGCGGCGGCGGCGGCGGGGTCCGGGGG 232
                      ************************************************************
consensus_9977#0      CGGGGAGATCTGGGGGACGTCGGAGGACCTGCTCCTGGCGTGCGCCGTGAGCCGCCATGG 300
consensus_9977#1      CGGGGAGATCTGGGGGACGTCGGAGGACCTGCTCCTGGCGTGCGCCGTGAGCCGCCATGG 292
                      ************************************************************
consensus_9977#0      GACGGCGAGCTGGGACGCGGTGGCGAAGGAGATGCAGTCGAGGTGCCCTTCCGCCGCCGT 360
consensus_9977#1      GACGGCGAGCTGGGACGCGGTGGCGAAGGAGATGCAGTCGAGGTGCCCTTCCGCCGCCGT 352
                      ************************************************************
consensus_9977#0      GTTCACCCCCACCACCTGCCGCCTCCGGTTCCGCGTCCTCCACCGCCGGTTCTCCGGCGG 420
consensus_9977#1      GTTCACCCCCACCACCTGCCGCCTCCGGTTCCGCGTCCTCCACCGCCGGTTCTCCGGCGG 412
                      ************************************************************
consensus_9977#0      CGTCACCGCCGAGAACGAGGACGCCGACGGCGGCGAGGAGGAGGAAGAGGCCGACGCCGC 480
consensus_9977#1      CGTCACCGCCGAGAACGAGGACGCCGACGGCGGCGAGGAGGAGGAAGAGGCCGACGCCGC 472
                      ************************************************************
consensus_9977#0      CGCCGTCGCCGGCTGGGTGGAGGAACTCCGCGAGCTGCGCGTCGCCGAGCTCCGCCGCGA 540
consensus_9977#1      CGCCGTCGCCGGCTGGGTGGAGGAACTCCGCGAGCTGCGCGTCGCCGAGCTCCGCCGCGA 532
                      ************************************************************
consensus_9977#0      GGTCGAGAAATACGATCTCTCGATCGGGTCGTTGCAATCAAAAGTGAAACGGCTCAAGGA 600
consensus_9977#1      GGTCGAGAAATACGATCTCTCGATCGGGTA---AAAACCAGCCCGAAAATAACCAAAAAA 589
                      *****************************      ** **      ***   *  **  *
consensus_9977#0      GGAGAGGGA-AAAGAGCATCTCCGGCGAGACGAAGCCGCCGCCGGCGGCGGCGGCGGTGA 659
consensus_9977#1      AGAAATTAATAAACACCTTGTTTTTTTATTTTAACTTTCGGCTGGT--------TCGTGC 641
                       ** *   * *** * * * *      *    **    * ** **           *** 
consensus_9977#0      AGGAGGAGGAGGAGGATGTACGGAAGGGATCACCGGAGGAGGCCGGCGCCGTGGAGGACA 719
consensus_9977#1      AT--------------TGCCCGCCACTCTCCACCGTCTGATGCTGAT-CGGTCGGCCACA 686
                      *               **  **  *     *****   ** ** *   * ** *   ***
consensus_9977#0      GGGTCTCCGGCCACGAATCCGGCCGGTCATGCAAGGAGTCGAACTCGTCAGATCTGAAGC 779
consensus_9977#1      ATTTTTTTGGA-ATAAACT--GCTTATTGC------------------------------ 713
                         * *  **  *  **    **   *                                 
consensus_9977#0      GGCCGGAGAACGACCCCGCGGTCGCCGACGACGACGACCGGGAGGCGGAGGAGGAGGAGG 839
consensus_9977#1      ------------------------------------------------------------
                                                                                  
consensus_9977#0      AGGCGGCGGCGGCGCCCGCGGCCGGCGACATCGCCGTGAAGGAGGAGGCGTCGGGCGAGT 899
consensus_9977#1      ------------------------------------------------------------
                                                                                  
consensus_9977#0      CGGTGGCTGGGTCGAAGGAGGCGGACGTCGAGAAGGAGAGCAGCGACGTGCAGAGCTCCG 959
consensus_9977#1      ------------------------------------------------------------
                                                                                  
consensus_9977#0      CCAGCCCGTCCCGCCGCCGGCGACGGAAGGGCGGAGGCGGCGGCGAATAGGCGGAGGCGG 1019
consensus_9977#1      ------------------------------------------------------------
                                                                                  
consensus_9977#0      CGTCGCCGTCGGTGTCCGTGCCCCTCCCCGCCGCCGAGGCCGAGCCGCTCGTCGCCTTCC 1079
consensus_9977#1      ------------------------------------------------------------
                                                                                  
consensus_9977#0      TCGAGTCGGTCCGGACCAGCAAGGCCGGCGCCGTGTTCGAGCGGCGGCTCGATAGCCAGG 1139
consensus_9977#1      ------------------------------------------------------------
                                                                                  
consensus_9977#0      ATGGGGAGAGGTACAGTGGCACGATCAGGCGCCATGTGGACCTGGAGACGGTCAGGTCGA 1199
consensus_9977#1      ------------------------------------------------------------
                                                                                  
consensus_9977#0      GGCTGGTGGGTGCAACGGCGGCGGCGGCGGCGGCGGCGTGCTACGCGTCGGCGTCCGAGT 1259
consensus_9977#1      ------------------------------------------------------------
                                                                                  
consensus_9977#0      TCTACCGCGACATGATGCTGCTCTGCGCCAACGCGCTCGTCTTCTTCCCGCGCGGCTCGC 1319
consensus_9977#1      ------------------------------------------------------------
                                                                                  
consensus_9977#0      CGGAGCACGCCGCCGCGCTCCAGCTGCGCGCGCTCGTCTCCAAGCAGGTCTCCAAGGACC 1379
consensus_9977#1      ------------------------------------------------------------
                                                                                  
consensus_9977#0      GGCAGCCTCACGCCTGGGCGA 1400
consensus_9977#1      ---------------------
                                           
 | 
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||