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Oryza sativa
cluster # 9980 cluster # 9980       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9980#0 length = 991 sequences # 2  
consensus_9980#1 length = 870 sequences # 2  
consensus_9980#2 length = 604 sequences # 1  
consensus_9980#3 length = 437 sequences # 2  

consensusID : consensus_9980#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 991
fasta sequence
                              [ACTTCCGCCTCCGCCTCCGTCTCCGCGGATTCTTCGAGCTCCCGGCCATGGCTGAACCCGAGGTGGTGGTTGCCGCAGGTGGGGAGGCGATGGAAGCCGAGGCGGCGGAGCCGGCTGCGGCGAATCCGAGTCAGAAGAGGGAGAGGGAGGAGGGGGATGACTCCGCCGCCGGCGCTGCTGGCGAGGAGGCGGCGGAGGGAGCTGCGGCCAAGAAGCAGAAGGTGGAGGGGGAGGGGGAGGCGAAGGGAGCGGAGGATGAGGCGAAGGGGGAGGAAGAGGAGGGCGCGAAGGAAGAGGAGGCGAAGCCGGTGAAGCTGGGACCCAAGGAGTTCGCCACGGGCGTCGAGATGTTCGACTACTTCTTCGCCCTGCTCCACTCGTGGGCGCCGCAGCTCGAGATCAACAAGTATGAGCATATGGTGTTGGAAGACCTGCTGAAGAAAGGCCATGCTGAGTCCGATAGGAAAATTGGAGCAGGAATTGAAGCATTTGAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTTCGACGAGTTGATGGATCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTG-ACAGCATACTTCCTCTCCCGG-AGGACATGAAG-ATTGGC-AATA-AGTCCAATGGCAAG-AAGGGTGGTGGCCACTTCAAGGGCGGTGG-AGGTAGGG-GAGGAGGACG-AGGTGGTGGCCGAGGTGGCGGGCGTGGTTTCCGCGGTCGGGGTAGGAGAGGCAACTAAAGGACTCAATAAAACCCCGAAAT-TTTTTGCATGCCTAATACCAATCCTTAAGATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGCCTTCTCCTAGAGGGACTG-ATGCTCCACTCACTTGTGTACTGTGAAAGTGCAACTATGATAAGATCTCGCCGATCTGTCTTCCCATATCTTCACCGCATTCTGTTTGAGCGATTTGTCTACTTGTCTTCACATGGCATATTTTGTTTTGTTTGGTT]

[+] EMBL AK059827             [ACTTCCGCCTCCGCCTCCGTCTCCGCGGATTCTTCGAGCTCCCGGCCATGGCTGAACCCGAGGTGGTGGTTGCCGCAGGTGGGGAGGCGATGGAAGCCGAGGCGGCGGAGCCGGCTGCGGCGAATCCGAGTCAGAAGAGGGAGAGGGAGGAGGGGGATGACTCCGCCGCCGGCGCTGCTGGCGAGGAGGCGGCGGAGGGAGCTGCGGCCAAGAAGCAGAAGGTGGAGGGGGAGGGGGAGGCGAAGGGAGCGGAGGATGAGGCGAAGGGGGAGGAAGAGGAGGGCGCGAAGGAAGAGGAGGCGAAGCCGGTGAAGCTGGGACCCAAGGAGTTCGCCACGGGCGTCGAGATGTTCGACTACTTCTTCGCCCTGCTCCACTCGTGGGCGCCGCAGCTCGAGATCAACAAGTATGAGCATATGGTGTTGGAAGACCTGCTGAAGAAAGGCCATGCTGAGTCCGATAGGAAAATTGGAGCAGGAATTGAAGCATTTGAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTTCGACGAGTTGATGGATCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTG ACAGCATACTTCCTCTCCCGG AGGACATGAAG ATTGGC AATA AGTCCAATGGCAAG AAGGGTGGTGGCCACTTCAAGGGCGGTGG AGGTAGGG GAGGAGGACG AGGTGGTGGCCGAGGTGGCGGGCGTGGTTTCCGCGGTCGGGGTAGGAGAGGCAACTAAAGGACTCAATAAAACCCCGAAAT TTTTTGCATGCCTAATACCAATCCTTAAGATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGCCTTCTCCTAGAGGGACTG ATGCTCCACTCACTTGTGTACTGTGAAAGTGCAACTATGATAAGATCTCGCCGATCTGTCTTCCCATATCTTCACCGCATTCTGTTTGAGCGATTTGTCTACTTGTCTTCACATGGCATATTTTGTTTTGTTTGGTT]
[+] EMBL BI805474             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAAGTGCGTTGTACAGCATACTTCCTCTCCCGGTAGGACATGAAGTATTGGCTAATATAGTCCNATGGCAAGTAAGGGTGTTGTCCACTTCAAGGTCGGTGGTAGGTAGGGTGAGGAGGACGTAGGTGGT GCCGAGGT GCGGGCGTGGTTTCCGCGGTCGGGGTAGGAGAGGCAACTAAAGGACTCAATAAAACCCCGAAATCCNTTTGCATGCCTAATACCAATCCTTAAGATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGCCTTCTCCTAG GCAACTGTATGCTCCACTCACTTGTGTACTGTGAAAGTGCAACTACGATAAGATCTCGCCGATCTGTCTTCCCATAaaaaaaaaa                                                            ]


>consensus_9980#0 ACTTCCGCCTCCGCCTCCGTCTCCGCGGATTCTTCGAGCTCCCGGCCATGGCTGAACCCG AGGTGGTGGTTGCCGCAGGTGGGGAGGCGATGGAAGCCGAGGCGGCGGAGCCGGCTGCGG CGAATCCGAGTCAGAAGAGGGAGAGGGAGGAGGGGGATGACTCCGCCGCCGGCGCTGCTG GCGAGGAGGCGGCGGAGGGAGCTGCGGCCAAGAAGCAGAAGGTGGAGGGGGAGGGGGAGG CGAAGGGAGCGGAGGATGAGGCGAAGGGGGAGGAAGAGGAGGGCGCGAAGGAAGAGGAGG CGAAGCCGGTGAAGCTGGGACCCAAGGAGTTCGCCACGGGCGTCGAGATGTTCGACTACT TCTTCGCCCTGCTCCACTCGTGGGCGCCGCAGCTCGAGATCAACAAGTATGAGCATATGG TGTTGGAAGACCTGCTGAAGAAAGGCCATGCTGAGTCCGATAGGAAAATTGGAGCAGGAA TTGAAGCATTTGAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTTCGAC GAGTTGATGGATCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTGACAGCATACTTCCTC TCCCGGAGGACATGAAGATTGGCAATAAGTCCAATGGCAAGAAGGGTGGTGGCCACTTCA AGGGCGGTGGAGGTAGGGGAGGAGGACGAGGTGGTGGCCGAGGTGGCGGGCGTGGTTTCC GCGGTCGGGGTAGGAGAGGCAACTAAAGGACTCAATAAAACCCCGAAATTTTTTGCATGC CTAATACCAATCCTTAAGATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGCCTTC TCCTAGAGGGACTGATGCTCCACTCACTTGTGTACTGTGAAAGTGCAACTATGATAAGAT CTCGCCGATCTGTCTTCCCATATCTTCACCGCATTCTGTTTGAGCGATTTGTCTACTTGT CTTCACATGGCATATTTTGTTTTGTTTGGTT



consensusID : consensus_9980#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 870
fasta sequence
                              [CCGCGGATTCTTCAAGCTCCCGGCCATGGCTGAACCCGAGGTGGTGGTTGCCGCAGGTGGGGAGGCGATGGAAGCCGAGGCGGCGGAGCCGGCTGCGGCGAATCCGAGGCGAAGGGAGCGGAGGATGAGGCGAAGGGGGAGGAAGAGGAGGGCGCGAAGGAAGAGGAGGCGAAGCCGGTGAAGCTGGGACCCAAGGAGTTCGCCACGGGCGTCGAGATGTTCGACTACTTCTTCGCCCTGCTCCACTCGTGGGCGCCGCAGCTCGAGATCAACAAGTATGAGCATATGGTGTTGGAAGACCTGCTGAAGAAAGGCCATGCTGAGTCCGATAGGAAAATTGGAGCAGGAATTGAAGCATTTGAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTTCGACGAGTTGATGGATCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTGACAGCATACTTCCTCTCCCGGAGGACATGAAGATTGGCAATAAGTCCAATGGCAAGAAGGGTGGTGGCCACTTCAAGGGCGGTGGAGGTA---GGGGAGGAGGACGAGGTGGTGGCCGAGGTGGCGGGCGTGGTTTCCGCGGTCGGGGTAGGAGAGGCAACTAAAGGACTCAATAAAACCCCGAAATTTTTTGCATGCCTAATACCAATCCTTAAGATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGCCTTCTCCTAGAGGGACTGATGCTCCACTCACTTGTGTACTGTGAAAGTGCAACTATGATAAGATCTTGCCGATCTGTCTTCCCATATCTGACCCGATTCTGTTTGAGCGATTTGTTTACTTTGCTTCCATGGGCAAAAACAACATAAATTATACCATTTGCCCTC]

[+] EMBL CA757033             [CCGCGGATTCTTCAAGCTCCCGGCCATGGCTGAACCCGAGGTGGTGGTTGCCGCAGGTGGGGAGGCGATGGAAGCCGAGGCGGCGGAGCCGGCTGCGGCGAATCCGAGGCGAAGGGAGCGGAGGATGAGGCGAAGGGGGAGGAAGAGGAGGGCGCGAAGGAAGAGGAGGCGAAGCCGGTGAAGCTGGGACCCAAGGAGTTCGCCACGGGCGTCGAGATGTTCGACTACTTCTTCGCCCTGCTCCACTCGTGGGCGCCGCAGCTCGAGATCAACAAGTATGAGCATATGGTGTTGGAAGACCTGCTGAAGAAAGGCCATGCTGAGTCCGATAGGAAAATTGGAGCAGGAATTGAAGCATTTGAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTTCGACGAGTTGATGGATCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTGACAGCATACTTCCTCTCCCGGAGGACATGAAGATTGGCAATAAGTCCAATGGCAAGAAGGGTGGTGGCCACTTCAAGGGCGGTGGAGGTA   GGGGAGGAGGACGAGGTGGTGGCCGAGGTGGCGGGCGTGGTTTCCGCGGTCGGGGTAGGAGAGGCAACTAAAGGACTCAATAAAACCCCGAAATTTTTTGCATGCCTAATACCAATCCTTAAGATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGCCTTCTCCTAGAGGGACTGATGCTCCACTCACTTGTGTACTGTGAAAGTGCAACTATGATAAGATCTTGCCGATCTGTCTTCCCATATCTGACCCGATTCTGTTTGAGCGATTTGTTTACTTTGCTTCCATGGGCAAAAACAACATAAATTATACCATTTGCCCTC]
[+] EMBL AA750012             [                                                                                                                                                                                                                                                                                                                                                                     aTTGAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTTCGATGAGTTGATGGATCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTGACAGCATACTTCCTCTCCCGGA GACATGAAGATTGGCAATAAGTCCAATGGCAAGAAGGGTGGTGGCCACTTCAAGGGCGGTGGAGGTAATCGGGGAGGAGGAgc                                                                                                                                                                                                                                                                                                                         ]


>consensus_9980#1 CCGCGGATTCTTCAAGCTCCCGGCCATGGCTGAACCCGAGGTGGTGGTTGCCGCAGGTGG GGAGGCGATGGAAGCCGAGGCGGCGGAGCCGGCTGCGGCGAATCCGAGGCGAAGGGAGCG GAGGATGAGGCGAAGGGGGAGGAAGAGGAGGGCGCGAAGGAAGAGGAGGCGAAGCCGGTG AAGCTGGGACCCAAGGAGTTCGCCACGGGCGTCGAGATGTTCGACTACTTCTTCGCCCTG CTCCACTCGTGGGCGCCGCAGCTCGAGATCAACAAGTATGAGCATATGGTGTTGGAAGAC CTGCTGAAGAAAGGCCATGCTGAGTCCGATAGGAAAATTGGAGCAGGAATTGAAGCATTT GAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTTCGACGAGTTGATGGA TCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTGACAGCATACTTCCTCTCCCGGAGGAC ATGAAGATTGGCAATAAGTCCAATGGCAAGAAGGGTGGTGGCCACTTCAAGGGCGGTGGA GGTAGGGGAGGAGGACGAGGTGGTGGCCGAGGTGGCGGGCGTGGTTTCCGCGGTCGGGGT AGGAGAGGCAACTAAAGGACTCAATAAAACCCCGAAATTTTTTGCATGCCTAATACCAAT CCTTAAGATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGCCTTCTCCTAGAGGGA CTGATGCTCCACTCACTTGTGTACTGTGAAAGTGCAACTATGATAAGATCTTGCCGATCT GTCTTCCCATATCTGACCCGATTCTGTTTGAGCGATTTGTTTACTTTGCTTCCATGGGCA AAAACAACATAAATTATACCATTTGCCCTC



consensusID : consensus_9980#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 604
fasta sequence
                              [TGAAGCTGGGACCCAAGGAGTTCGCCACGGGCGTCGAGATGTTCGACTACTTCTTCGCCCTGCTCCACTCGTGGGCGCCGCAGCTCGAGATCAACAAGTATGAGCATATGGTGTTGGAAGACCTGCTGAAGAAAGGCCATGCTGAGTCCGATAGGAAAATTGGAGCAGGAATTGAAGCATTTGAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTTCGACGAGTTGATGGATCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTGACAGCATACTTCCTCTCCCGGAGGACATGAAGATTGGCAATAAGTCCAATGGCGGGCGTGGTTTCCGCGGTCGGGGTAGGAGAGGCAACTAAAGGACTCAATAAAACCCCGAAATTTTTTGCATGCCTAATACCAATCCTTAAGATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGCCTTCTCCTAGAGGGACTGATGCTCCACTCACTTGTGTACTGTGAAAGTGCAACTATGATAAGATCTCGCCGATCTGTCTTTCCCATAANNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGAGACTA]

[+] EMBL BE039952             [TGAAGCTGGGACCCAAGGAGTTCGCCACGGGCGTCGAGATGTTCGACTACTTCTTCGCCCTGCTCCACTCGTGGGCGCCGCAGCTCGAGATCAACAAGTATGAGCATATGGTGTTGGAAGACCTGCTGAAGAAAGGCCATGCTGAGTCCGATAGGAAAATTGGAGCAGGAATTGAAGCATTTGAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTTCGACGAGTTGATGGATCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTGACAGCATACTTCCTCTCCCGGAGGACATGAAGATTGGCAATAAGTCCAATGGCGGGCGTGGTTTCCGCGGTCGGGGTAGGAGAGGCAACTAAAGGACTCAATAAAACCCCGAAATTTTTTGCATGCCTAATACCAATCCTTAAGATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGCCTTCTCCTAGAGGGACTGATGCTCCACTCACTTGTGTACTGTGAAAGTGCAACTATGATAAGATCTCGCCGATCTGTCTTTCCCATAANNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGAGACTA]


>consensus_9980#2 TGAAGCTGGGACCCAAGGAGTTCGCCACGGGCGTCGAGATGTTCGACTACTTCTTCGCCC TGCTCCACTCGTGGGCGCCGCAGCTCGAGATCAACAAGTATGAGCATATGGTGTTGGAAG ACCTGCTGAAGAAAGGCCATGCTGAGTCCGATAGGAAAATTGGAGCAGGAATTGAAGCAT TTGAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTTCGACGAGTTGATG GATCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTGACAGCATACTTCCTCTCCCGGAGG ACATGAAGATTGGCAATAAGTCCAATGGCGGGCGTGGTTTCCGCGGTCGGGGTAGGAGAG GCAACTAAAGGACTCAATAAAACCCCGAAATTTTTTGCATGCCTAATACCAATCCTTAAG ATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGCCTTCTCCTAGAGGGACTGATGC TCCACTCACTTGTGTACTGTGAAAGTGCAACTATGATAAGATCTCGCCGATCTGTCTTTC CCATAANNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGAG ACTA



consensusID : consensus_9980#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 437
fasta sequence
                              [AAGGAAAAGGAGGCGAAACCGGTGAANCTGGGACCCCAAGGAAGTTNCCCCAGGCCGTCGAAATGTTCGACCTACTTCCTCGCCCTGCTCCANTCGTGGGCGCCGCAGCTCGAGATCAACAAGGTGAGGGTTGCGANTCGGTTGTCAATCCGTGGCCGGCCTCTCGCTGTTTTTGGCCGCGAAAAAAAGTTTCTTGCTTTATTGATGACTCGCGAAGTCACGATGTGTGTTGTTGTAGCTAAACTTTGGTATGATAAAAGTTTTATCCTTGTAGCTGTAGTGATAAGCTGGTAGGTTATTTAATTAGCTTTAGTGGTGTATAATGGTGCCCGTATTAGGTAGTACTTTGCCTTTGAAACCGGTGANCCAANCGGCTAAATAATTCGACATGATAATCTGAGTGTTCGCCTTGTNTTTAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C97722               [AAGGAAAAGGAGGCGAAACCGGTGAANCTGGGACCCCAAGGAAGTTNCCCCAGGCCGTCGAAATGTTCGACCTACTTCCTCGCCCTGCTCCANTCGTGGGCGCCGCAGCTCGAGATCAACAAGGTGAGGGTTGCGANTCGGTTGTCAATCCGTGGCCGGCCTCTCGCTGTTTTTGGCCGCGAAAAAAAGTTTCTTGCTTTATTGATGACTCGCGAAGTCACGATGTGTGTTGTTGTAGCTAAACTTTGGTATGATAAAAGTTTTATCCTTGTAGCTGTAGTGATAAGCTGGTAGGTTATTTAATTAGCTTTAGTGGTGTATAATGGTGCCCGTATTAGGTAGTACTTTGCCTTTGAAACCGGTGANCCAANCGGCTAAATAATTCGACATGATAATCTGAGTGTTCGCCTTGTNTTTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU091813             [                                                                                                                                                                                              TTCTTGCTTTATTGATGACTCNCGAANTCACGATGTGTGTTGTTGTAGCTAAACTTTGGTATGATAAAANTTTTANCCTTGTAGCTGTAGTGATAANCTGGTAGGTTATTTAATTANCTTTAGTGGTGTATAATGGTGCCCGTATTAGGTAGTACTTTGCCTTTGAAACCGGTGANCCAANCGGCTAAATAANTCGACATGATAANCTGAGTGTTCNCCTTGTNTTTAAAAAAAAAAAAAAAAAAAA]


>consensus_9980#3 AAGGAAAAGGAGGCGAAACCGGTGAANCTGGGACCCCAAGGAAGTTNCCCCAGGCCGTCG AAATGTTCGACCTACTTCCTCGCCCTGCTCCANTCGTGGGCGCCGCAGCTCGAGATCAAC AAGGTGAGGGTTGCGANTCGGTTGTCAATCCGTGGCCGGCCTCTCGCTGTTTTTGGCCGC GAAAAAAAGTTTCTTGCTTTATTGATGACTCGCGAAGTCACGATGTGTGTTGTTGTAGCT AAACTTTGGTATGATAAAAGTTTTATCCTTGTAGCTGTAGTGATAAGCTGGTAGGTTATT TAATTAGCTTTAGTGGTGTATAATGGTGCCCGTATTAGGTAGTACTTTGCCTTTGAAACC GGTGANCCAANCGGCTAAATAATTCGACATGATAATCTGAGTGTTCGCCTTGTNTTTAAA AAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9980#0      ACTTCCGCCTCCGCCTCCGTCTCCGCGGATTCTTCGAGCTCCCGGCCATGGCTGAACCCG 60
consensus_9980#1      ----------------------CCGCGGATTCTTCAAGCTCCCGGCCATGGCTGAACCCG 38
consensus_9980#2      ------------------------------------------------------------
consensus_9980#3      ------------------------------------------------------------
                                                                                  

consensus_9980#0      AGGTGGTGGTTGCCGCAGGTGGGGAGGCGATGGAAGCCGAGGCGGCGGAGCCGGCTGCGG 120
consensus_9980#1      AGGTGGTGGTTGCCGCAGGTGGGGAGGCGATGGAAGCCGAGGCGGCGGAGCCGGCTGCGG 98
consensus_9980#2      ------------------------------------------------------------
consensus_9980#3      ------------------------------------------------------------
                                                                                  

consensus_9980#0      CGAATCCGAGTCAGAAGAGGGAGAGGGAGGAGGGGGATGACTCCGCCGCCGGCGCTGCTG 180
consensus_9980#1      CGAATCCGAG-------------------------------------------------- 108
consensus_9980#2      ------------------------------------------------------------
consensus_9980#3      ------------------------------------------------------------
                                                                                  

consensus_9980#0      GCGAGGAGGCGGCGGAGGGAGCTGCGGCCAAGAAGCAGAAGGTGGAGGGGGAGGGGGAGG 240
consensus_9980#1      -----------------------------------------------------------G 109
consensus_9980#2      ------------------------------------------------------------
consensus_9980#3      ------------------------------------------------------------
                                                                                  

consensus_9980#0      CGAAGGGAGCGGAGGATGAGGCGAAGGGGGAGGAAGAGGAGGGCGCGAAGGAAGAGGAGG 300
consensus_9980#1      CGAAGGGAGCGGAGGATGAGGCGAAGGGGGAGGAAGAGGAGGGCGCGAAGGAAGAGGAGG 169
consensus_9980#2      ------------------------------------------------------------
consensus_9980#3      -----------------------------------------------AAGGAAAAGGAGG 13
                                                                                  

consensus_9980#0      CGAAGCCGGTGAAGCTGGGACCC--AAGGAGTTCGCCACGGGCGTCGAGATGTTCGAC-T 357
consensus_9980#1      CGAAGCCGGTGAAGCTGGGACCC--AAGGAGTTCGCCACGGGCGTCGAGATGTTCGAC-T 226
consensus_9980#2      ---------TGAAGCTGGGACCC--AAGGAGTTCGCCACGGGCGTCGAGATGTTCGAC-T 48
consensus_9980#3      CGAAACCGGTGAANCTGGGACCCCAAGGAAGTTNCCCCAGGCCGTCGAAATGTTCGACCT 73
                               **** *********  * * ****  **  ** ****** ********* *

consensus_9980#0      ACTTCTTCGCCCTGCTCCACTCGTGGGCGCCGCAGCTCGAGATCAACAAGTATGAGCATA 417
consensus_9980#1      ACTTCTTCGCCCTGCTCCACTCGTGGGCGCCGCAGCTCGAGATCAACAAGTATGAGCATA 286
consensus_9980#2      ACTTCTTCGCCCTGCTCCACTCGTGGGCGCCGCAGCTCGAGATCAACAAGTATGAGCATA 108
consensus_9980#3      ACTTCCTCGCCCTGCTCCANTCGTGGGCGCCGCAGCTCGAGATCAACAAG-GTGAGGGTT 132
                      ***** ************* ******************************  ****  * 

consensus_9980#0      TGGTGTTGGAAGACCTGCTGAAGAAAGGCCAT-GCTGAGTCCGATAGGAAAATTGGAGCA 476
consensus_9980#1      TGGTGTTGGAAGACCTGCTGAAGAAAGGCCAT-GCTGAGTCCGATAGGAAAATTGGAGCA 345
consensus_9980#2      TGGTGTTGGAAGACCTGCTGAAGAAAGGCCAT-GCTGAGTCCGATAGGAAAATTGGAGCA 167
consensus_9980#3      GCGANTCGGTTGTCAATCCGTGGCCGGCCTCTCGCTGTTTTTGGCCGCGAAA---AAAAG 189
                        *  * **  * *   * *  *   * *  * ****  *  *   *  ***    *   

consensus_9980#0      GGAATTGAAGCATTTGAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTT 536
consensus_9980#1      GGAATTGAAGCATTTGAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTT 405
consensus_9980#2      GGAATTGAAGCATTTGAGATCCGCAACCACCCGGTGTTTCAGAGCCGCTGTTTCTTCGTT 227
consensus_9980#3      TTTCTTGCTTTATTGATGACTCGCGAAGTCACGATGTGT----GTTGTTGTAGCTAAACT 245
                          ***    ***   **  *** *   * ** *** *    *  * ***  **    *

consensus_9980#0      CGACGAGTTGATGGATCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTGACAGCATACTT 596
consensus_9980#1      CGACGAGTTGATGGATCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTGACAGCATACTT 465
consensus_9980#2      CGACGAGTTGATGGATCCTCTGATGATTTCAGCTTCCGTAAGTGCGTTGACAGCATACTT 287
consensus_9980#3      T--TGGTATGATAAAAGTTTT-ATCCTTGTAGCTGTAGTGA-TAAGCTGGTAGGTTATTT 301
                          *   ****  *   * * **  **  ****   ** * *  * **  **  ** **

consensus_9980#0      CCTCTCCCGGAGGACATGAAGATTGGCAATAAGTCCAATGGCAAGAAGGGTGGTGGCCAC 656
consensus_9980#1      CCTCTCCCGGAGGACATGAAGATTGGCAATAAGTCCAATGGCAAGAAGGGTGGTGGCCAC 525
consensus_9980#2      CCTCTCCCGGAGGACATGAAGATTGGCAATAAGTCCAATGGC------------------ 329
consensus_9980#3      AATTAGCTTTAGTG-GTGTATAATGGTGCCCGTATTA--GGTA----------------- 341
                        *   *   **    ** * * ***          *  **                   

consensus_9980#0      TTCAAGGGCGGTGGAGGTAGGGGAGGAGGACGAGGTGGTGGCCGAGGTGGCGGGCGTGGT 716
consensus_9980#1      TTCAAGGGCGGTGGAGGTAGGGGAGGAGGACGAGGTGGTGGCCGAGGTGGCGGGCGTGGT 585
consensus_9980#2      ---------------------------------------------------GGGCGTGGT 338
consensus_9980#3      ---------------------------------------------------GTACTTTGC 350
                                                                         *  * * * 

consensus_9980#0      TTCCGCGGTCGGGGTAGGAGAGGCAACTAAAGGACTCAATAAAACCCCGAAATTTTTTGC 776
consensus_9980#1      TTCCGCGGTCGGGGTAGGAGAGGCAACTAAAGGACTCAATAAAACCCCGAAATTTTTTGC 645
consensus_9980#2      TTCCGCGGTCGGGGTAGGAGAGGCAACTAAAGGACTCAATAAAACCCCGAAATTTTTTGC 398
consensus_9980#3      CTTTGAAACCGG--TGANCCAANCGGCTAAATAATTCGACATGATAATCTGAGTGTTCGC 408
                       *  *    ***  *     *  *  *****  * ** * *  *       * * ** **

consensus_9980#0      ATGCCTAATACCAATCCTTAAGATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGC 836
consensus_9980#1      ATGCCTAATACCAATCCTTAAGATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGC 705
consensus_9980#2      ATGCCTAATACCAATCCTTAAGATTGAGGCATTCATGGCAACATGTGCTTGTTTGTCTGC 458
consensus_9980#3      CTTGTNTTTAAAAAAAAAAAAAAAAAAAA------------------------------- 437
                       *      **  **     ** *   *                                 

consensus_9980#0      CTTCTCCTAGAGGGACTGATGCTCCACTCACTTGTGTACTGTGAAAGTGCAACTATGATA 896
consensus_9980#1      CTTCTCCTAGAGGGACTGATGCTCCACTCACTTGTGTACTGTGAAAGTGCAACTATGATA 765
consensus_9980#2      CTTCTCCTAGAGGGACTGATGCTCCACTCACTTGTGTACTGTGAAAGTGCAACTATGATA 518
consensus_9980#3      ------------------------------------------------------------
                                                                                  

consensus_9980#0      AGATCTCGCCGATCTGTCTT-CCCATATCTTCACCGCATTCTGTTTGAGCGATTTGTCTA 955
consensus_9980#1      AGATCTTGCCGATCTGTCTT-CCCATATCTG-ACCCGATTCTGTTTGAGCGATTTGTTTA 823
consensus_9980#2      AGATCTCGCCGATCTGTCTTTCCCATAANNNNANNNNNNNNNNNNNNNNNNNNNNNNNNN 578
consensus_9980#3      ------------------------------------------------------------
                                                                                  

consensus_9980#0      CTTGTCTTC---------ACATGGCATATTTTGTTTTGTTTGGTT-- 991
consensus_9980#1      CTTTGCTTCCATGGGCAAAAACAACATAAATTATACCATTTGCCCTC 870
consensus_9980#2      NNNNNNNNN------------NNNNNNNCTCGAGACTA--------- 604
consensus_9980#3      -----------------------------------------------
                                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)