|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9998#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2431 fasta sequence
[AAGCCGTCGGAGAGAAAGAGAAATATTCGCCACCGGCTGCAGGCGGCGGCGGCGGCTGAACCCCTAAACCCAATGTCGCCGGCGGCGAGGAGCCTCCTGCTATCGGCCGCCCGCCGTCAACGCCGCCGCTTCTCGACGGAGGCCCCGTCGTCGACTCCGCAGCAGCAGCTCCTCCCCAAGGGGAAGCGGTGGGACGCGGTGGTGATCGGCGGCGGCCACAACGGGCTCGCCGCCGCCGCCTACCTCGCCCGCGCCGGCCGCTCCGTCGCCGTGCTCGAGCGCCGTGGCGTCATCGGCGGCGCCGCCGTCTCCGAGTCCGACCTCGTCCCGGGCTTCCGCTTCTCCCGCTGCAGCTACCTCCTCAGCCTCCTCCGCCCCGCCCTGATCCAGGAGCTGGAGCTGGAGAGGCATGGGCTGAAGCTCTTGCCGCGGAGCCCGTCGTCATTCACGCCATGCCTAGACGGCAGGTATCTCCTTCTCGGCCCCGACGCTGAGCTGAACCACTCGGAGATCAGCAAGTTCTCCGAGAATGATGCCAGTGCATACCCGAGGTACGAGGAGAAGCTGGAGAAGTTCTGCAAACTCATGGACTTTGTCATAGACTCGCCTCCCCCTGAGATGAGGCATGAATACCACCTCTCCATGGTGGACAGGATGAAGGATAAGGTTGACAAGTCTGTGTTCTGGAGCAAACTTCTTGGGATTGTGATGCAGCAGGGGCAGAAGGACATGGTGGATTTCTTTGACCTTCTCCTTTCACCAGCATCCAAGATCTTGAACAACTGGTTTGAGGGTGATGTGTTGAAGGCAACTCTTGCGACTGATGCTGTGATAGGTTCTATGGCTGGTGTCCACACTCCAGGATCTGGTTATGTTCTTCTGCATCATGTTATGGGGGAAACTGGTGGCCAACGTGGAGTATGGGCGCCTGAAACCATGTCCAAGCCTTTGTGGCCCTAGCGTCAGGAATTGTTTTGCTGGCGCATATCTCCACTGTCTAGTCAAACAGGGCAAATGCCATATAATGGTCATATGGTTTCTAGCCAAATATGCTAGTTTTAGCATTGTTGGTTCATTAGTAGTTGGTTTCTTGATTCTTCTTATTTTGCTTGTTGAAAAACTTATGTGGTAAAACAAAAACATTCGCTTCAGGTATGTTGAAGGTGGTATGGGTTCAGTATCGTCAGCTATAAGCAAAGCAGCTCTTGAAGCAGGTTTCCCAGATATCTGTTCATCACACTTCTGGGAAGGTACAGGGGGTAGTTTTGGCTGATGGAACAGAGGTGCTGACATCAGTTGTTTTATCAAATGCAACTTCATATAGAACATTTGTGGACCTAGTGCCTGCCAATGTTCTTCCAGACAACTTCCTCTCTGCTATCAAAACTGCAGATTATAGCTCTGCAACAACGAAAATTAATGTGGCTGTTGACAGGCTGCCACAGTTTTCCTGTTGCAAAGACTTTAATCCTGAAGGCGGTCCAGAACACATGGGCACCATACACATTGGATCTGAAAGCATGGAGGAAATCGATCTAGCGTACAGGGAAGCTGCAAATGGCGTCTCATCCACAAGACCTGTTATAGAAATGACGATTCCTTCTGTGTTGGATAAGACCATCTCCCCACCAGGCCAGCATGTTATTAACCTTTTTGTTCAGTACACACCATACAAACTTTCAGAAGGCAGCTGGCAGGATTCTAATGTTAGAAAATCCTTTGCTGAAAGATGCTTTTCCTTGATTGATGAATATGCACCGGGTTTTAGCTCATCAGTGGTAGGCTATGATATGCTGACTCCACCTGATCTTG-AAAGGGAGTTTGGCCTAACAGGTGGTAACATCTTTCATGGCGCAATGGGCTTGGATTCACTTTTCCTCATGAGGCCTGCCAAGGGATGGTCAGATTACAGAACTCCAGTGAAGGGATTGTACCTCTGTGGCAGTGGTGCACACCCAGGAGGTGGGGTAATGGGCGCTCCGGGCCGTAACGCTGCCTCCGTTGTTTTGGAAGATCTCAGGACAAAATAGATGGTGACCCGAGGAAACATGGAAACGGTGATTGACACCAGGCTGGGTCTCGTTCAAGCACTGCACTGCAAAAGCAACCGAATTCCATCAGAATGAAAAGCACCTCATCAGACATCAGGTATAAACACCTGTGCCATGTGAGCTCACATATTAAGGAAATGGACAAACATTTCTTGAGGAGAGGCACATTTTCTGAATTAATTGGCCGACTTTCTAGTTTAGAGAGGGGAACATTCTTTGCCACCTGACCCTATTTCCCAGTATGAAGATATTTTGCATTTGTTCTCTTCTATTTGCAGCCTGTCTGAAATATATTATTCATCGGATTATCTACTTGATTGTAGGATAAATTAAATATTTTTTTTAAAGGGATCAAATATCTTGGAACAAAAAAAAAAAAA]
[+] EMBL AK067318 [AAGCCGTCGGAGAGAAAGAGAAATATTCGCCACCGGCTGCAGGCGGCGGCGGCGGCTGAACCCCTAAACCCAATGTCGCCGGCGGCGAGGAGCCTCCTGCTATCGGCCGCCCGCCGTCAACGCCGCCGCTTCTCGACGGAGGCCCCGTCGTCGACTCCGCAGCAGCAGCTCCTCCCCAAGGGGAAGCGGTGGGACGCGGTGGTGATCGGCGGCGGCCACAACGGGCTCGCCGCCGCCGCCTACCTCGCCCGCGCCGGCCGCTCCGTCGCCGTGCTCGAGCGCCGTGGCGTCATCGGCGGCGCCGCCGTCTCCGAGTCCGACCTCGTCCCGGGCTTCCGCTTCTCCCGCTGCAGCTACCTCCTCAGCCTCCTCCGCCCCGCCCTGATCCAGGAGCTGGAGCTGGAGAGGCATGGGCTGAAGCTCTTGCCGCGGAGCCCGTCGTCATTCACGCCATGCCTAGACGGCAGGTATCTCCTTCTCGGCCCCGACGCTGAGCTGAACCACTCGGAGATCAGCAAGTTCTCCGAGAATGATGCCAGTGCATACCCGAGGTACGAGGAGAAGCTGGAGAAGTTCTGCAAACTCATGGACTTTGTCATAGACTCGCCTCCCCCTGAGATGAGGCATGAATACCACCTCTCCATGGTGGACAGGATGAAGGATAAGGTTGACAAGTCTGTGTTCTGGAGCAAACTTCTTGGGATTGTGATGCAGCAGGGGCAGAAGGACATGGTGGATTTCTTTGACCTTCTCCTTTCACCAGCATCCAAGATCTTGAACAACTGGTTTGAGGGTGATGTGTTGAAGGCAACTCTTGCGACTGATGCTGTGATAGGTTCTATGGCTGGTGTCCACACTCCAGGATCTGGTTATGTTCTTCTGCATCATGTTATGGGGGAAACTGGTGGCCAACGTGGAGTATGGGCGCCTGAAACCATGTCCAAGCCTTTGTGGCCCTAGCGTCAGGAATTGTTTTGCTGGCGCATATCTCCACTGTCTAGTCAAACAGGGCAAATGCCATATAATGGTCATATGGTTTCTAGCCAAATATGCTAGTTTTAGCATTGTTGGTTCATTAGTAGTTGGTTTCTTGATTCTTCTTATTTTGCTTGTTGAAAAACTTATGTGGTAAAACAAAAACATTCGCTTCAGGTATGTTGAAGGTGGTATGGGTTCAGTATCGTCAGCTATAAGCAAAGCAGCTCTTGAAGCAGGTTTCCCAGATATCTGTTCATCACACTTCTGGGAAGGTACAGGGGGTAGTTTTGGCTGATGGAACAGAGGTGCTGACATCAGTTGTTTTATCAAATGCAACTTCATATAGAACATTTGTGGACCTAGTGCCTGCCAATGTTCTTCCAGACAACTTCCTCTCTGCTATCAAAACTGCAGATTATAGCTCTGCAACAACGAAAATTAATGTGGCTGTTGACAGGCTGCCACAGTTTTCCTGTTGCAAAGACTTTAATCCTGAAGGCGGTCCAGAACACATGGGCACCATACACATTGGATCTGAAAGCATGGAGGAAATCGATCTAGCGTACAGGGAAGCTGCAAATGGCGTCTCATCCACAAGACCTGTTATAGAAATGACGATTCCTTCTGTGTTGGATAAGACCATCTCCCCACCAGGCCAGCATGTTATTAACCTTTTTGTTCAGTACACACCATACAAACTTTCAGAAGGCAGCTGGCAGGATTCTAATGTTAGAAAATCCTTTGCTGAAAGATGCTTTTCCTTGATTGATGAATATGCACCGGGTTTTAGCTCATCAGTGGTAGGCTATGATATGCTGACTCCACCTGATCTTG AAAGGGAGTTTGGCCTAACAGGTGGTAACATCTTTCATGGCGCAATGGGCTTGGATTCACTTTTCCTCATGAGGCCTGCCAAGGGATGGTCAGATTACAGAACTCCAGTGAAGGGATTGTACCTCTGTGGCAGTGGTGCACACCCAGGAGGTGGGGTAATGGGCGCTCCGGGCCGTAACGCTGCCTCCGTTGTTTTGGAAGATCTCAGGACAAAATAGATGGTGACCCGAGGAAACATGGAAACGGTGATTGACACCAGGCTGGGTCTCGTTCAAGCACTGCACTGCAAAAGCAACCGAATTCCATCAGAATGAAAAGCACCTCATCAGACATCAGGTATAAACACCTGTGCCATGTGAGCTCACATATTAAGGAAATGGACAAACATTTCTTGAGGAGAGGCACATTTTCTGAATTAATTGGCCGACTTTCTAGTTTAGAGAGGGGAACATTCTTTGCCACCTGACCCTATTTCCCAGTATGAAGATATTTTGCATT ]
[-] EMBL CB649185 [ TAATGTTAGAAAATCCTTTGCTGAAAGATGCTTTTCCTTGATTGATGAATATGCACCGGGTTTTAGCTCATCAGTGGTAGGCTATGATATGCTGACTCCACCTGATCTTG AAAGGGAGTTTGGCCTAACAGGTGGTAACATCTTTCATGGCGCAATGGGCTTGGATTCACTTTTCCTCATGAGGCCTGCCAAGGGATGGTCAGATTACAGAACTCCAGTGAAGGGATTGTACCTCTGTGGCAGTGGTGCACACCCAGGAGGTGGGGTAATGGGCGCTCCGGGCCGTAACGCTGCCTCCGTTGTTTTGGAAGATCTCAGGACAAAATAGATGGTGACCCGAGGAAACATGGAAACGGTGATTGACACCAGGCTGGGTCTCGTTCAAGCACTGCACTGCAAAAGCAACCGAATTCCATCAGAATGAAAAGCACCTCATCAGACATCAGGTATAAACACCTGTGCCATGTGAGCTCACATATTAAGGAAATGGACAAACATTTCTTGAGGAGAGGCACATTTTCTGAATTAATTGGCCGACTTTCTAGTTTAGAGAGGGGAACATTCTTTGCCACCTGACCCTATTTCCCAGTATGAAGATATTTTGCATTTGTTCTCTTCTATTTGCAGCCTGTCTGAAATATATTATTCATCGGATTATCTACTTGATTGTAGGATAAATTAAATATTTTTTTTAAAGGGATCAAATAT ]
[+] EMBL AU057120 [ CCTNGATTGATGAATATCCACCGGNTTTTAGCTCANCAGTGGTA GCTATNATATGCTGACTCCACCTGATCTTGAAAAGGGAGTTTGCCCTAACAGGTGGTACCTNCTTTCATGGCGCAATGGGCTTGGATTCACTTTTCCTNATGAGGCCTNCCAAGGGATGNTCAGATTACAGAACTCCAGTGAAGGGATTGTACCTCTGTGGCANTGGTGCACACCCAGGAGGTGGGGTAATGGGCGCTCCGGGCCGTAACGCTGCCTCCGTTGTTTTGGAAGATCTCAGGACAAAATAGATGGTGACCCGAGGAAACATGGAAACGGTGATTGACACCAGGCTGGGTCTCGTTCAAGCACTGCACTGCAAAAGCAACCGAATTCCATCAGAATGAAAAGCACCTCATCAGACATCAGGTATAAACACCTGTGCCATGTGAGCTCACATATTAAGGAAATGGACAAACATTTCTTGAGGAGAGGCACATTTTCTGAATTAATTGGCCGACTTTCTAGTTTAGAGAGGGGAACATTCTTTGCCACCTGACCCTATTTCCCAGTATGAAGATATTTTGCATTTGTTCTCTTCTATTTGCAGCCTGTCTGAAATATATTATTCATCGGATTATCTACTTGATTGTAGGATAAATTAAATATTTTTTTAACAATTATCAAATATCTTGGAACAAAAAAAAAAAAA]
consensusID : consensus_9998#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2217 fasta sequence
[CGTCGGAGAGAAAGAGAAATATTCGCCACCGGCTGCAGGCGGCGGCGGCGGCTGAACCCCTAAACCCAATGTCGCCGGCGGCGAGGAGCCTCCTGCTATCGGCCGCCCGCCGTCAACGCCGCCGCTTCTCGACGGAGGCCCCGTCGTCGACTCCGCAGCAGCAGCTCCTCCCCAAGGGGAAGCGGTGGGACGCGGTGGTGATCGGCGGCGGCCACAACGGGCTCGCCGCCGCCGCCTACCTCGCCCGCGCCGGCCGCTCCGTCGCCGTGCTCGAGCGCCGTGGCGTCATCGGCGGCGCCGCCGTCTCCGAGTCCGACCTCGTCCCGGGCTTCCGCTTCTCCCGCTGCAGCTACCTCCTCAGCCTCCTCCGCCCCGCCCTGATCCAGGAGCTGGAGCTGGAGAGGCATGGGCTGAAGCTCTTGCCGCGGAGCCCGTCGTCATTCACGCCATGCCTAGACGGCAGGTATCTCCTTCTCGGCCCCGACGCTGAGCTGAACCACTCGGAGATCAGCAAGTTCTCCGAGAATGATGCCGGTGCATACCCGAGGTACGAGGAGAAGCTGGAGAAGTTCTGCAAACTCATGGACTTTGTCATAGACTCGCCTCCCCCTGAGATGAGGCATGAATACCACCTCTCCATGGTGGACAGGATGAAGGATAAGGTTGACAAGTCTGTGTTCTGGAGCAAACTTCTTGGGATTGTGATGCAGCAGGGGCAGAAGGACATGGTGGATTTCTTTGACCTTCTCCTTTCACCAGCATCCAAGATCTTGAACAACTGGTTTGAGGGTGATGTGTTGAAGGCAACTCTTGCGACTGATGCTGTGATAGGTTCTATGGCTGGTGTCCACACTCCAGGATCTGGTTATGTTCTTCTGCATCATGTTATGGGGGAAACTGGTGGCCAACGTGGAGTATGGGCGTATGTTGAAGGTGGTATGGGTTCAGTATCGTCAGCTATAAGCAAAGCAGCTCTTGAAGCAGGTGTGGAAATTTTAACAAATGCAGAGGTTTCCCAGATATCTGTTCATCACACTTCTGGGAAGGTACAGGGGGTAGTTTTGGCTGATGGAACAGAGGTGCTGACATCAGTTGTTTTATCAAATGCAACTCCATATAGAACATTTGTGGACCTAGTGCCTGCCAATGTTCTTCCAGACAACTTCCTCTCTGCTATCAAAACTGCAGATTATAGCTCTGCAACAACGAAAATTAATGTGGCTGTTGACAGGCTGCCACAGTTTTCCTGTTGCAAAGACTTTAATCCTGAAGGCGGTCCAGAACACATGGGCACCATACACATTGGATCTGAAAGCATGGAGGAAATCGATCTAGCGTACAGGGAAGCTGCAAATGGCGTCTCATCCACAAGACCTGTTATAGAAATGACGATTCCTTCTGTGTTGGATAAGACCATCTCCCCACCAGGCCAGCATGTTATTAACCTTTTTGTTCAGTACACACCATACAAACTTTCAGAAGGCAGCTGGCAGGATTCTAATGTTAGAAAATCCTTTGCTGAAAGATGCTTTTCCTT-GATTGATGAATATGCACCGGGTTTTAGCTCATCAGTGGTAGGCTATGATATGCTGACTCCACCTGATCTTGAAAGGGAGTTTGGCCTAACAGGTGGTAACATCTTTCATGGCGCAATGGGCTTGGATTCACTTTTCCTCATGAGGCCTGCCAAGGGATGGTCAGATTACAGAACTCCAGTGAAGGGATTGTACCTCTGTGGCAGTGGTGCACACCCAGGAGGTGGGGTAATGGGCGCTCCGGGCCGTAACGCTGCCTCCGTTGTTTTGGAAGATCTCAGGACAAAATAGATGGTGACCCGAGGAAACATGGAAACGGTGATTGACACCAGGCTGGGTCTCGTTCAAGCACTGCACTGCAAAAGCAACCGAATTCCATCAGAATGAAAAGCACCTCATCAGACATCAGGTATAAACACCTGTGCCATGTGAGCTCACATATTAAGGAAATGGACAAACATTTCTTGAGGAGAGGCACATTTTCTGAATTAATTGGCCGACTTTCTAGTTTAGAGAGGGGAACATTCTTTGCCACCTGACCCTATTTCCCAGTATGAAGATATTTTGCATTTGTTCTCTTCTATTTGCAGCCTGTCTGAAATATATTATTCATCGGATTATCTACTTGATTGTAGGATAAATTAAATATTTTTTTAACAATTATCAAATATCTTGGAACAAG]
[+] EMBL AK063915 [CGTCGGAGAGAAAGAGAAATATTCGCCACCGGCTGCAGGCGGCGGCGGCGGCTGAACCCCTAAACCCAATGTCGCCGGCGGCGAGGAGCCTCCTGCTATCGGCCGCCCGCCGTCAACGCCGCCGCTTCTCGACGGAGGCCCCGTCGTCGACTCCGCAGCAGCAGCTCCTCCCCAAGGGGAAGCGGTGGGACGCGGTGGTGATCGGCGGCGGCCACAACGGGCTCGCCGCCGCCGCCTACCTCGCCCGCGCCGGCCGCTCCGTCGCCGTGCTCGAGCGCCGTGGCGTCATCGGCGGCGCCGCCGTCTCCGAGTCCGACCTCGTCCCGGGCTTCCGCTTCTCCCGCTGCAGCTACCTCCTCAGCCTCCTCCGCCCCGCCCTGATCCAGGAGCTGGAGCTGGAGAGGCATGGGCTGAAGCTCTTGCCGCGGAGCCCGTCGTCATTCACGCCATGCCTAGACGGCAGGTATCTCCTTCTCGGCCCCGACGCTGAGCTGAACCACTCGGAGATCAGCAAGTTCTCCGAGAATGATGCCGGTGCATACCCGAGGTACGAGGAGAAGCTGGAGAAGTTCTGCAAACTCATGGACTTTGTCATAGACTCGCCTCCCCCTGAGATGAGGCATGAATACCACCTCTCCATGGTGGACAGGATGAAGGATAAGGTTGACAAGTCTGTGTTCTGGAGCAAACTTCTTGGGATTGTGATGCAGCAGGGGCAGAAGGACATGGTGGATTTCTTTGACCTTCTCCTTTCACCAGCATCCAAGATCTTGAACAACTGGTTTGAGGGTGATGTGTTGAAGGCAACTCTTGCGACTGATGCTGTGATAGGTTCTATGGCTGGTGTCCACACTCCAGGATCTGGTTATGTTCTTCTGCATCATGTTATGGGGGAAACTGGTGGCCAACGTGGAGTATGGGCGTATGTTGAAGGTGGTATGGGTTCAGTATCGTCAGCTATAAGCAAAGCAGCTCTTGAAGCAGGTGTGGAAATTTTAACAAATGCAGAGGTTTCCCAGATATCTGTTCATCACACTTCTGGGAAGGTACAGGGGGTAGTTTTGGCTGATGGAACAGAGGTGCTGACATCAGTTGTTTTATCAAATGCAACTCCATATAGAACATTTGTGGACCTAGTGCCTGCCAATGTTCTTCCAGACAACTTCCTCTCTGCTATCAAAACTGCAGATTATAGCTCTGCAACAACGAAAATTAATGTGGCTGTTGACAGGCTGCCACAGTTTTCCTGTTGCAAAGACTTTAATCCTGAAGGCGGTCCAGAACACATGGGCACCATACACATTGGATCTGAAAGCATGGAGGAAATCGATCTAGCGTACAGGGAAGCTGCAAATGGCGTCTCATCCACAAGACCTGTTATAGAAATGACGATTCCTTCTGTGTTGGATAAGACCATCTCCCCACCAGGCCAGCATGTTATTAACCTTTTTGTTCAGTACACACCATACAAACTTTCAGAAGGCAGCTGGCAGGATTCTAATGTTAGAAAATCCTTTGCTGAAAGATGCTTTTCCTT GATTGATGAATATGCACCGGGTTTTAGCTCATCAGTGGTAGGCTATGATATGCTGACTCCACCTGATCTTGAAAGGGAGTTTGGCCTAACAGGTGGTAACATCTTTCATGGCGCAATGGGCTTGGATTCACTTTTCCTCACGAGGCCTGCCAAGGGATGGTCAGATTACAGAACTCCAGTGAAGGGATTGTACCTCTGTGGCAGTGGTGCACACCCAGGAGGTGGGGTAATGGGCGCTCCGGGCCGTAACGCTGCCTCCGTTGTTTTGGAAGATCTCAGGACAAAATAGATGGTGACCCGAGGAAACATGGAAACGGTGATTGACACCAGGCTGGGTCTCGTTCAAGCACTGCACTGCAAAAGCAACCGAATTCCATCAGAATGAAAAGCACCTCATCAGACATCAGGTATAAACACCTGTGCCATGTGAGCTCACATATTAAGGAAATGGACAAACATTTCTTGAGGAGAGGCACATTTTCTGAATTAATTGGCCGACTTTCTAGTTTAGAGAGGGGAACATTCTTTGCCACCTGACCCTATTTCCCAGTATGAAGATATTTTGCATTTGTTCTCTTCTATTTGCAGCCTGTCTGAAATATATTATTCATCGGATTATCTACTTGATTGTAGGATAAATTAAATATTTTTTTAACAATTATCAAATATCTTGGAACAAG]
[+] EMBL AK103431 [ CTGCAGGCGGCGGCGGCGGCTGAACCCCTAAACCCAATGTCGCCGGCGGCGAGGAGCCTCCTGCTATCGGCCGCCCGCCGTCAACGCCGCCGCTTCTCGACGGAGGCCCCGTCGTCGACTCCGCAGCAGCAGCTCCTCCCCAAGGGGAAGCGGTGGGACGCGGTGGTGATCGGCGGCGGCCACAACGGGCTCGCCGCCGCCGCCTACCTCGCCCGCGCCGGCCGCTCCGTCGCCGTGCTCGAGCGCCGTGGCGTCATCGGCGGCGCCGCCGTCTCCGAGTCCGACCTCGTCCCGGGCTTCCGCTTCTCCCGCTGCAGCTACCTCCTCAGCCTCCTCCGCCCCGCCCTGATCCAGGAGCTGGAGCTGGAGAGGCATGGGCTGAAGCTCTTGCCGCGGAGCCCGTCGTCATTCACGCCATGCCTAGACGGCAGGTATCTCCTTCTCGGCCCCGACGCTGAGCTGAACCACTCGGAGATCAGCAAGTTCTCCGAGAATGATGCCGGTGCATACCCGAGGTACGAGGAGAAGCTGGAGAAGTTCTGCAAACTCATGGACTTTGTCATAGACTCGCCTCCCCCTGAGATGAGGCATGAATACCACCTCTCCATGGTGGACAGGATGAAGGATAAGGTTGACAAGTCTGTGTTCTGGAGCAAACTTCTTGGGATTGTGATGCAGCAGGGGCAGAAGGACATGGTGGATTTCTTTGACCTTCTCCTTTCACCAGCATCCAAGATCTTGAACAACTGGTTTGAGGGTGATGTGTTGAAGGCAACTCTTGCGACTGATGCTGTGATAGGTTCTATGGCTGGTGTCCACACTCCAGGATCTGGTTATGTTCTTCTGCATCATGTTATGGGGGAAACTGGTGGCCAACGTGGAGTATGGGCGTATGTTGAAGGTGGTATGGGTTCAGTATCGTCAGCTATAAGCAAAGCAGCTCTTGAAGCAGGTGTGGAAATTTTAACAAATGCAGAGGTTTCCCAGATATCTGTTCATCACACTTCTGGGAAGGTACAGGGGGTAGTTTTGGCTGATGGAACAGAGGTGCTGACATCAGTTGTTTTATCAAATGCAACTCCATATAGAACATTTGTGGACCTAGTGCCTGCCAATGTTCTTCCAGACAACTTCCTCTCTGCTATCAAAACTGCAGATTATAGCTCTGCAACAACGAAAATTAATGTGGCTGTTGACAGGCTGCCACAGTTTTCCTGTTGCAAAGACTTTAATCCTGAAGGCGGTCCAGAACACATGGGCACCATACACATTGGATCTGAAAGCATGGAGGAAATCGATCTAGCGTACAGGGAAGCTGCAAATGGCGTCTCATCCACAAGACCTGTTATAGAAATGACGATTCCTTCTGTGTTGGATAAGACCATCTCCCCACCAGGCCAGCATGTTATTAACCTTTTTGTTCAGTACACACCATACAAACTTTCAGAAGGCAGCTGGCAGGATTCTAATGTTAGAAAATCCTTTGCTGAAAGATGCTTTTCCTT GATTGATGAATATGCACCGGGTTTTAGCTCATCAGTGGTAGGCTATGATATGCTGACTCCACCTGATCTTGAAAGGGAGTTTGGCCTAACAGGTGGTAACATCTTTCATGGCGCAATGGGCTTGGATTCACTTTTCCTCATGAGGCCTGCCAAGGGATGGTCAGATTACAGAACTCCAGTGAAGGGATTGTACCTCTGTGGCAGTGGTGCACACCCAGGAGGTGGGGTAATGGGCGCTCCGGGCCGTAACGCTGCCTCCGTTGTTTTGGAAGATCTCAGGACAAAATAGATGGTGACCCGAGGAAACATGGAAACGGTGATTGACACCAGGCTGGGTCTCGTTCAAGCACTGCACTGCAAAAGCAACCGAATTCCATCAGAATGAAAAGCACCTCATCAGACATCAGGTATAAACACCTGTGCCATGTGAGCTCACATATTAAGGAAATGGACAAACATTTCTTGAGGAGAGGCACATTTTCTGAATTAATTGGCCGACTTTCTAGTTTAGAGAGGGGAACATTCTTTGCCACCTGACCCTATTTCCCAGTATGAAGATATTTTGCATTTGTTCTCTTCTATTTGCAGCCTGTCTGAAATATATTATTCATCGGATTATCTACTTGATTGTAGGATAAATTAAATATTTTTTTAACAATTATCAAATATCTTGGAACAAG]
[+] EMBL CB649184 [ GGCGAGGAGCCTCCTGCTATCGGCCGCCCGCCGTCAACGCCGCCGCTTCTCGACGGAGGCCCCGTCGTCGACTCCGCAGCAGCAGCTCCTCCCCAAGGGGAAGCGGTGGGACGCGGTGGTGATCGGCGGCGGCCACAACGGGCTCGCCGCCGCCGCCTACCTCGCCCGCGCCGGCCGCTCCGTCGCCGTGCTCGAGCGCCGTGGCGTCATCGGCGGCGCCGCCGTCTCCGAGTCCGACCTCGTCCCGGGCTTCCGCTTCTCCCGCTGCAGCTACCTCCTCAGCCTCCTCCGCCCCGCCCTGATCCAGGAGCTGGAGCTGGAGAGGCATGGGCTGAAGCTCTTGCCGCGGAGCCCGTCGTCATTCACGCCATGCCTAGACGGCAGGTATCTCCTTCTCGGCCCCGACGCTGAGCTGAACCACTCGGAGATCAGCAAGTTCTCCGAGAATGATGCCGGTGCATACCCGAGGTACGAGGAGAAGCTGGAGAAGTTCTGCAAACTCATGGACTTTGTCATAGACTCGCCTCCCCCTGAGATGAGGCATGAATACCACCTCTCCATGGTGGACAGGATGAAGGATAAGGTTGACAAGTCTGTGTTCTGGAGCAAACTTCTTGGGATTGTGATGCAGCAGGGGCAGAAGGACATGGTGGATTTCTTTGACCTTCTCCTTTCACCAGCATCCAAGATCTTGAACAACTGGTTTGAGGGTGATGTGTTGAAGGCAACTCTTGCGACTGATGCTGTGATAGGTTCTATGGCTGGTGTCCACACTCCAGGATCTGGTTAT ]
[+] EMBL AU057119 [ GCCTGCCAATGTTCTTCCAGACAACTTCCTCTCTGCTATCAAAACTGCAGATTATAGCTCTGCAACAACGAAAATTAATGTGGCTGTTGACAGGCTGCCACAGTTTTCCTGTTGCAAAGACTTTAATCCTGAAGGCGGTCCAGAACACATGGGCACCATACACATTGGATCTGAAAGCATGGAGGAAATCGATCTAGCGTACAGGGAAGCTGCAAATGGCGTCTCATCCACAAGACCTGTTATAGAAATGACGATTCCTTCTGTGTTGGATAAGACCATCTCCCCACCAGGCCAGCATGTTATTAACCTTTTTGTTCAGTACACACCATACAAACTTTCAGAAGGCAGCTGGCAGGATTCTAATGTTAGAAAATCCTTTGCTGAAAGATGCTTTTCCTTGGATTGATGAATATGCACCGGGTTTTAGCTCATCAGTGGTAGGCTATGATATGCTGACTCCACCTGATCTTGAAAGGGAGTTTGGCCTAACAGGTGGTAACATCTTTCATGGCGCAATGGGCTTGGATTCACTTTTCCTCATGAGGCCTGCCAAGGGATGGTCAGATTACAGAACTCCAGTGAAGGGATTGTACCTCTGTGGCAGTGGTGCACACCCAGGAGGTGGGGTAATGGGCGCTCCGGGCCGTAACGCTGCCTCCGTTGTTTTGGAAGATCTCAGGACAAAATAGATG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9998#0 AAGCCGTCGGAGAGAAAGAGAAATATTCGCCACCGGCTGCAGGCGGCGGCGGCGGCTGAA 60
consensus_9998#1 ----CGTCGGAGAGAAAGAGAAATATTCGCCACCGGCTGCAGGCGGCGGCGGCGGCTGAA 56
********************************************************
consensus_9998#0 CCCCTAAACCCAATGTCGCCGGCGGCGAGGAGCCTCCTGCTATCGGCCGCCCGCCGTCAA 120
consensus_9998#1 CCCCTAAACCCAATGTCGCCGGCGGCGAGGAGCCTCCTGCTATCGGCCGCCCGCCGTCAA 116
************************************************************
consensus_9998#0 CGCCGCCGCTTCTCGACGGAGGCCCCGTCGTCGACTCCGCAGCAGCAGCTCCTCCCCAAG 180
consensus_9998#1 CGCCGCCGCTTCTCGACGGAGGCCCCGTCGTCGACTCCGCAGCAGCAGCTCCTCCCCAAG 176
************************************************************
consensus_9998#0 GGGAAGCGGTGGGACGCGGTGGTGATCGGCGGCGGCCACAACGGGCTCGCCGCCGCCGCC 240
consensus_9998#1 GGGAAGCGGTGGGACGCGGTGGTGATCGGCGGCGGCCACAACGGGCTCGCCGCCGCCGCC 236
************************************************************
consensus_9998#0 TACCTCGCCCGCGCCGGCCGCTCCGTCGCCGTGCTCGAGCGCCGTGGCGTCATCGGCGGC 300
consensus_9998#1 TACCTCGCCCGCGCCGGCCGCTCCGTCGCCGTGCTCGAGCGCCGTGGCGTCATCGGCGGC 296
************************************************************
consensus_9998#0 GCCGCCGTCTCCGAGTCCGACCTCGTCCCGGGCTTCCGCTTCTCCCGCTGCAGCTACCTC 360
consensus_9998#1 GCCGCCGTCTCCGAGTCCGACCTCGTCCCGGGCTTCCGCTTCTCCCGCTGCAGCTACCTC 356
************************************************************
consensus_9998#0 CTCAGCCTCCTCCGCCCCGCCCTGATCCAGGAGCTGGAGCTGGAGAGGCATGGGCTGAAG 420
consensus_9998#1 CTCAGCCTCCTCCGCCCCGCCCTGATCCAGGAGCTGGAGCTGGAGAGGCATGGGCTGAAG 416
************************************************************
consensus_9998#0 CTCTTGCCGCGGAGCCCGTCGTCATTCACGCCATGCCTAGACGGCAGGTATCTCCTTCTC 480
consensus_9998#1 CTCTTGCCGCGGAGCCCGTCGTCATTCACGCCATGCCTAGACGGCAGGTATCTCCTTCTC 476
************************************************************
consensus_9998#0 GGCCCCGACGCTGAGCTGAACCACTCGGAGATCAGCAAGTTCTCCGAGAATGATGCCAGT 540
consensus_9998#1 GGCCCCGACGCTGAGCTGAACCACTCGGAGATCAGCAAGTTCTCCGAGAATGATGCCGGT 536
********************************************************* **
consensus_9998#0 GCATACCCGAGGTACGAGGAGAAGCTGGAGAAGTTCTGCAAACTCATGGACTTTGTCATA 600
consensus_9998#1 GCATACCCGAGGTACGAGGAGAAGCTGGAGAAGTTCTGCAAACTCATGGACTTTGTCATA 596
************************************************************
consensus_9998#0 GACTCGCCTCCCCCTGAGATGAGGCATGAATACCACCTCTCCATGGTGGACAGGATGAAG 660
consensus_9998#1 GACTCGCCTCCCCCTGAGATGAGGCATGAATACCACCTCTCCATGGTGGACAGGATGAAG 656
************************************************************
consensus_9998#0 GATAAGGTTGACAAGTCTGTGTTCTGGAGCAAACTTCTTGGGATTGTGATGCAGCAGGGG 720
consensus_9998#1 GATAAGGTTGACAAGTCTGTGTTCTGGAGCAAACTTCTTGGGATTGTGATGCAGCAGGGG 716
************************************************************
consensus_9998#0 CAGAAGGACATGGTGGATTTCTTTGACCTTCTCCTTTCACCAGCATCCAAGATCTTGAAC 780
consensus_9998#1 CAGAAGGACATGGTGGATTTCTTTGACCTTCTCCTTTCACCAGCATCCAAGATCTTGAAC 776
************************************************************
consensus_9998#0 AACTGGTTTGAGGGTGATGTGTTGAAGGCAACTCTTGCGACTGATGCTGTGATAGGTTCT 840
consensus_9998#1 AACTGGTTTGAGGGTGATGTGTTGAAGGCAACTCTTGCGACTGATGCTGTGATAGGTTCT 836
************************************************************
consensus_9998#0 ATGGCTGGTGTCCACACTCCAGGATCTGGTTATGTTCTTCTGCATCATGTTATGGGGGAA 900
consensus_9998#1 ATGGCTGGTGTCCACACTCCAGGATCTGGTTATGTTCTTCTGCATCATGTTATGGGGGAA 896
************************************************************
consensus_9998#0 ACTGGTGGCCAACGTGGAGTATGGGCGCCTGAAACCATGTCCAAGCCTTTGTGGCCCTAG 960
consensus_9998#1 ACTGGTGGCCAACGTGGAGTATGGGCGT--------ATGTTGAAG--------------- 933
*************************** **** ***
consensus_9998#0 CGTCAGGAATTGTTTTGCTGGCGCATATCTCCACTGTCTAGTCAAACAGGGCAAATGCCA 1020
consensus_9998#1 ------------------------------------------------------------
consensus_9998#0 TATAATGGTCATATGGTTTCTAGCCAAATATGCTAGTTTTAGCATTGTTGGTTCATTAGT 1080
consensus_9998#1 -------GTGGTATGGGTTC--------------------AGTATCGTCAGCT------- 959
** ***** *** ** ** ** * *
consensus_9998#0 AGTTGGTTTCTTGATTCTTCTTATTTTGCTTGTTGAAAAACTTATGTGGTAAAACAAAAA 1140
consensus_9998#1 --------------------------------------------------ATAAGCAAAG 969
* ** ***
consensus_9998#0 CATTCGCTTCAGGTATGTTGAAGGTGGTATGGGTTCAGTATCGTCAGCTATAAGCAAAGC 1200
consensus_9998#1 CA---GCTC--------TTGAAGCAGGTGTGGA------------AATTTTAACAAATGC 1006
** *** ****** *** *** * * *** ** **
consensus_9998#0 AGCTCTTGAAGCAGGTTTCCCAGATATCTGTTCATCACACTTCTGGGAAGGTACAGGGGG 1260
consensus_9998#1 AG----------AGGTTTCCCAGATATCTGTTCATCACACTTCTGGGAAGGTACAGGGGG 1056
** ************************************************
consensus_9998#0 TAGTTTTGGCTGATGGAACAGAGGTGCTGACATCAGTTGTTTTATCAAATGCAACTTCAT 1320
consensus_9998#1 TAGTTTTGGCTGATGGAACAGAGGTGCTGACATCAGTTGTTTTATCAAATGCAACTCCAT 1116
******************************************************** ***
consensus_9998#0 ATAGAACATTTGTGGACCTAGTGCCTGCCAATGTTCTTCCAGACAACTTCCTCTCTGCTA 1380
consensus_9998#1 ATAGAACATTTGTGGACCTAGTGCCTGCCAATGTTCTTCCAGACAACTTCCTCTCTGCTA 1176
************************************************************
consensus_9998#0 TCAAAACTGCAGATTATAGCTCTGCAACAACGAAAATTAATGTGGCTGTTGACAGGCTGC 1440
consensus_9998#1 TCAAAACTGCAGATTATAGCTCTGCAACAACGAAAATTAATGTGGCTGTTGACAGGCTGC 1236
************************************************************
consensus_9998#0 CACAGTTTTCCTGTTGCAAAGACTTTAATCCTGAAGGCGGTCCAGAACACATGGGCACCA 1500
consensus_9998#1 CACAGTTTTCCTGTTGCAAAGACTTTAATCCTGAAGGCGGTCCAGAACACATGGGCACCA 1296
************************************************************
consensus_9998#0 TACACATTGGATCTGAAAGCATGGAGGAAATCGATCTAGCGTACAGGGAAGCTGCAAATG 1560
consensus_9998#1 TACACATTGGATCTGAAAGCATGGAGGAAATCGATCTAGCGTACAGGGAAGCTGCAAATG 1356
************************************************************
consensus_9998#0 GCGTCTCATCCACAAGACCTGTTATAGAAATGACGATTCCTTCTGTGTTGGATAAGACCA 1620
consensus_9998#1 GCGTCTCATCCACAAGACCTGTTATAGAAATGACGATTCCTTCTGTGTTGGATAAGACCA 1416
************************************************************
consensus_9998#0 TCTCCCCACCAGGCCAGCATGTTATTAACCTTTTTGTTCAGTACACACCATACAAACTTT 1680
consensus_9998#1 TCTCCCCACCAGGCCAGCATGTTATTAACCTTTTTGTTCAGTACACACCATACAAACTTT 1476
************************************************************
consensus_9998#0 CAGAAGGCAGCTGGCAGGATTCTAATGTTAGAAAATCCTTTGCTGAAAGATGCTTTTCCT 1740
consensus_9998#1 CAGAAGGCAGCTGGCAGGATTCTAATGTTAGAAAATCCTTTGCTGAAAGATGCTTTTCCT 1536
************************************************************
consensus_9998#0 TGATTGATGAATATGCACCGGGTTTTAGCTCATCAGTGGTAGGCTATGATATGCTGACTC 1800
consensus_9998#1 TGATTGATGAATATGCACCGGGTTTTAGCTCATCAGTGGTAGGCTATGATATGCTGACTC 1596
************************************************************
consensus_9998#0 CACCTGATCTTGAAAGGGAGTTTGGCCTAACAGGTGGTAACATCTTTCATGGCGCAATGG 1860
consensus_9998#1 CACCTGATCTTGAAAGGGAGTTTGGCCTAACAGGTGGTAACATCTTTCATGGCGCAATGG 1656
************************************************************
consensus_9998#0 GCTTGGATTCACTTTTCCTCATGAGGCCTGCCAAGGGATGGTCAGATTACAGAACTCCAG 1920
consensus_9998#1 GCTTGGATTCACTTTTCCTCATGAGGCCTGCCAAGGGATGGTCAGATTACAGAACTCCAG 1716
************************************************************
consensus_9998#0 TGAAGGGATTGTACCTCTGTGGCAGTGGTGCACACCCAGGAGGTGGGGTAATGGGCGCTC 1980
consensus_9998#1 TGAAGGGATTGTACCTCTGTGGCAGTGGTGCACACCCAGGAGGTGGGGTAATGGGCGCTC 1776
************************************************************
consensus_9998#0 CGGGCCGTAACGCTGCCTCCGTTGTTTTGGAAGATCTCAGGACAAAATAGATGGTGACCC 2040
consensus_9998#1 CGGGCCGTAACGCTGCCTCCGTTGTTTTGGAAGATCTCAGGACAAAATAGATGGTGACCC 1836
************************************************************
consensus_9998#0 GAGGAAACATGGAAACGGTGATTGACACCAGGCTGGGTCTCGTTCAAGCACTGCACTGCA 2100
consensus_9998#1 GAGGAAACATGGAAACGGTGATTGACACCAGGCTGGGTCTCGTTCAAGCACTGCACTGCA 1896
************************************************************
consensus_9998#0 AAAGCAACCGAATTCCATCAGAATGAAAAGCACCTCATCAGACATCAGGTATAAACACCT 2160
consensus_9998#1 AAAGCAACCGAATTCCATCAGAATGAAAAGCACCTCATCAGACATCAGGTATAAACACCT 1956
************************************************************
consensus_9998#0 GTGCCATGTGAGCTCACATATTAAGGAAATGGACAAACATTTCTTGAGGAGAGGCACATT 2220
consensus_9998#1 GTGCCATGTGAGCTCACATATTAAGGAAATGGACAAACATTTCTTGAGGAGAGGCACATT 2016
************************************************************
consensus_9998#0 TTCTGAATTAATTGGCCGACTTTCTAGTTTAGAGAGGGGAACATTCTTTGCCACCTGACC 2280
consensus_9998#1 TTCTGAATTAATTGGCCGACTTTCTAGTTTAGAGAGGGGAACATTCTTTGCCACCTGACC 2076
************************************************************
consensus_9998#0 CTATTTCCCAGTATGAAGATATTTTGCATTTGTTCTCTTCTATTTGCAGCCTGTCTGAAA 2340
consensus_9998#1 CTATTTCCCAGTATGAAGATATTTTGCATTTGTTCTCTTCTATTTGCAGCCTGTCTGAAA 2136
************************************************************
consensus_9998#0 TATATTATTCATCGGATTATCTACTTGATTGTAGGATAAATTAAATATTTTTTTTAAAGG 2400
consensus_9998#1 TATATTATTCATCGGATTATCTACTTGATTGTAGGATAAATTAAATATTTTTTTAACAAT 2196
****************************************************** * *
consensus_9998#0 GATCAAATATCTTGGAACAAAAAAAAAAAAA 2431
consensus_9998#1 TATCAAATATCTTGGAACAAG---------- 2217
*******************
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||