Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10002 cluster # 10002       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10002#0 length = 1175 sequences # 10  
consensus_10002#1 length = 594 sequences # 1  
consensus_10002#2 length = 586 sequences # 1  

consensusID : consensus_10002#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1175
fasta sequence
                              [GTGGACACCATGATGAAATTGTTAACCACTGCTGGAAACTATGCTCGGGATGATGTCGTCTCATCTCTAGTTAGCCTGATTTCTCAAAATCATAGTCTACACGCGTACGCTACCGTTCAGCTTTTCAATGCTATGAATGGAGCTATGTCTCAACAACCTTTGGTTCAGGTCGCTTGTTGGACAATCGGGGAATATGGTGATTTGTTGGTTTCTCCAGAACCTTCAGAAGATATTCCACAGCCAGTTACTGAATTAGAATTGATTACTGTGTTACAGCGTGCTCTGGTTAGTGTGACTTCAACAGTGCAAACAAAGCAAATGGTTATAAACACACTTGTTAAACTAACCACACGTTTTACTCCAACACATTTAGAAAAACTAAAAGAACTCATTAGATTTTATTCGACTAATGTGAATCTGGAGCTGCAACAACGATCTGTTGAATACAGCAAAATTTGTTCACAACCTATAAG-TATTCGTGGTGGTTTACTTGATTGCATGCCAGTACTACCAACAAATGCTTTGTCTGGAACTTCGAATCCAGATAACCTGAGTCGTGGAATTAATGAATGTGATGTCATCGAAACTGAAGAAAGTAACACCGGAGGTGCAAAAACTCCATCAATTAATGGCTCAACTAATCAGTCGCTTACGATTTTCGA-TTTATTGGGTCCAGAAAGTGAACCTGATTCTCATA-TGACTCAAAGCGCGACCACGAATCATTCTGATACTGGGACTAATTTACTAGATCTTCTTGATGTATTTGCTCCATCTG-AAACCAAAGTGTCTAACAATACTCAAAATGCACCAGGA-TTTTCAGGTGATTTATTTGGCACT-AAAAATGGTTACGGTGCCCCT-ATCATTCAACCTGCTCCGCAGCCTTCTGTCTTGGATTTCGACTTTGTCGATAATTCCGGTCCAGGTTTGACAAATCAAGTCTCGTCAATTCCATCCACCACGATATACAATTCGAATGAGATAAAAATTGTATTCAACTTCGTGCCTTCCGCTGTACTAGATGGTCATTNTAACATAAATCACATGCAGTTAGTGGGCACTACTACAAGTCTTCAGCCAATTAATTCTTTTGAATACAGGCTGCTGTACCCAAAATCTGTCAGTACAGCTTTTCCCACCATCGTCTAGTCTATTTCATGTGCCNTACTCTACTCCGC]

[+] EMBL CD162869             [GTGGACACCATGATGAAATTGTTAACCACTGCTGGAAACTATGCTCGGGATGATGTCGTCTCATCTCTAGTTAGCCTGATTTCTCAAAATCATAGTCTACACGCGTACGCTACCGTTCAGCTTTTCAATGCTATGAATGGAGCTATGTCTCAACAACCTTTGGTTCAGGTCGCTTGTTGGACAATCGGGGAATATGGTGATTTGTTGGTTTCTCCAGAACCTTCAGAAGATATTCCACAGCCAGTTACTGAATTAGAATTGATTACTGTGTTACAGCGTGCTCTGGTTAGTGTGACTTCAACAGTGCAAACAACGCAAATGGTTATAAACACACTTGTTAAACTAACCACACGTTTTACTCCAACACATTTAGAAAAACTAAAAGAACTCATTAGATTTTATTCGACTAATGTGAATCTGGAGCTGCAACAACGATCTGTTGAATACAGCAAAATTTGTTCACAACCTATAAGNTATTCGTGGTGGTTTACTTGATTGCATGCCAGTACTACCAACAAATGCTTTGTCTGGAACTTCGAATCCAGATAACCTGAGTCGTGGAATTAATGAATGTGATGTCATCGAAACTGAAGAAAGTAACACCGGNAGTGCANAAACTCCATCAATTAATGGCTCAACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD091738             [                                                              ATCTCTAGTTAGCCTGATTTCTCAAAATCATAGTCTACACGCGTACGCTACCGTTCAGCTTTTCAATGCTATGAATGGAGCTATGTCTCAACAACCTTTGGTTCAGGTCGCTTGTTGGACAATCGGGGAATATGGTGATTTGTTGGTTTCTCCAGAACCTTCAGAAGATATTCCACAGCCAGTTACTGAATTAGAATTGATTACTGTGTTACAGCGTGCTCTGGTTAGTGTGACTTCAACAGTGCAAACAAAGCAAATGGTTATAAACACACTTGTTAAACTAACCACACGTTTTACTCCAACACATTTAGAAAAACTAAAAGAACTCATTAGATTTTATTCGACTAATGTGAATCTGGAGCTGCAACAACGATCTGTTGAATACAGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD161236             [                                                                                                                                                                                            GGAATATGGTGATTTGTTGGTTTCTCCAGAACCTTCAGAAGATATTCCACAGCCAGTTACTGAATTAGAATTGATTACTGTGTTACAGCGTGCTCTGGTTAGTGTGACTTCAACAGTGCAAACAAAGCAAATGGTTATAAACACACTTGTTAAACTAACCACACGTTTTACTCCAACACATTTAGAAAAACTAAAAGAACTCATTAGATTTTATTCGACTAATGTGAATCTGGAGCTGCAACAACGATCTGTTGAATACAGCAAAATTTGTTCACAACCTATAAG TATTCGTGGTGGTTTACTTGATTGCATGCCAGTACTACCAACAAATGCTTTGTCTGGAACTTCGAATCCAGATAACCTGAGTCGTGGAATTAATGAATGTGATGTCATCGAAACTGAAGAAAGTAACACCGGAGGTGCAAAAACTCCATCAATTAATGGCTCAACTAATCAGTCGCTTACGATTTTCGA TTTATTGGGTCCAGAGAGTGAACCTGATTCTCATA TGACTCANAGCGCGACCACGAATCATTCTGATACTGNGACTAATTTACTAGATCTTCTTGATGTATTTGCTCCATCTG AAACC AAGTGTCTAAC ATACTCA                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD178634             [                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTTGAATACAGCAAAATTTGTTCACAACCTATAAG TATTCGTGGTGGTTTACTTGATTGCATGCCAGTACTACCAGCAAATGCTTTGTCTGGAACTTCGAATCCAGATAACCTGAGTCGTGGAATTAATGAATGTGATGTCATCGAAACTGAAGAAAGTAACACCGGAGGTGCAAAAACTCCATCAATTAATGGCTCAACTAATCAGTCGCTTACGATTTTCGA TTTATTGGGTCCAGAAAGTGAACCTGATTCTCATA TGACTCAAAGCGCGACCACGAATCATTCTGATACTGGGACTAATTTACTAGATCTTCTTGATGTATTTGCTCCATCTG AAACCAAAGTGTCTAACAATACTCAAAATGCACCAGGA TTTTCAGGTGATTTATTTGGCACT AAAAATGGTTACGATGCCCCT ATCATTCAACCT                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD091272             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGAATACAGCAAAATTGGTTCACAACCTATAAG TATTCGTGGTGGTTTACTTGATTGCATGCCAGTACTACCAACAAATGCTTTGTCTGGAACTTCGAATCCAGATAACCTGAGTCGTGGAATTAATGAATGTGATGTCATCGAAACTGAAGAAAGTAACACCGGAGGTGCAAAAACTCCATCAATTAATGGCTCAACTAATCAGTCGCTTACGATTTTCGA TTTATTGGGTCCAGAAAGTGAACCTGATTCTCATA TGACTCAAAGCGCGACCACGAATCATTCTGATACTGGGACTAATTTACTAGATCTTCTTGATGTATTTGCTCCATCTG AAACCAAAGTGTCTAACAATACTCAAAATGCACCAGGA TTTTCAGGTGATTTATTTGGCACT AAAAATGGTTACGGTGCCCCT ATCATTCAAC                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD091300             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGAATACAGCGAAATTTGTTCACAACCTATAAG TATTCGTGGTGGTTTACTTGATTGCATGCCAGTACTACCAACAAATGCTTTGTCTGGAACTTCGAATCCAGATAGCCTGAGTCGTGGAATTAATGAATGTGATGTCATCGAAACTGAAGAAAGTAACACCGGAGGTGCAAAAACTCCATCAATTAATGGCTCAACTAATCAGTCGCTTACGATTTTCGA TTTATTGGGTCCAGAAAGTGAACCTGATTCTCATA TGACTCAAAGCGCGACCACGAATCATTCTGATACTGGGACTAATTTACTAGATCTTCTTGATGTATTTGCTCCATCTG AAACCAAAGTGTCTAACAATACTCAAAATGCACCAGGA TTTTCAGGTGATTTATTTGGCACT AAAAATGGTTACGGTGCCCCT ATCATTCAAC                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD091264             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGAATACAGCAAAATTTGTTCACAACCTATAAG TATTCGTGGTGGTTTACTTGATTGCATGCCAGTACTACCAACAAATGCTTTGTCTGGAACTTCGAATCCAGATAACCTGAGTCGTGGAATTAATGAATGTGATGTCATCGAAACTGAAGAAAGTAACACCGGAGGTGCAAAAACTCCATCAATTAATGGCTCAACTAATCAGTCGCTTACGATTTTCGA TTTATTGGGTCCAGAAAGTGAACCTGATTCTCATA TGACTCAAAGCGCGACCACGAATCATTCTGATACTGGGACTAATTTACTAGATCTTCTTGATGTATTTGCTCCATCTG AAACCAAAGTGTCTAACAATACTCAAAATGCACCAGGA TTTTCAGGTGATTTATTTGGCACT AAAAATGGTTACGGTGCCCCT ATCATTCAAC                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD171505             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGTGATGTCATCGAAACTGAAGAAAGTAACACCGGAGGTGCAAAAACTCCATCAATTAATGGCTCAACTAATCAGTCGCTTACGATTTTCGATTTTATTGGGTCCAGAAAGTGAACCTGATTCTCATATTGACTCAAAGCGCGACCACGAATCATTCTGATACTGGGACTAATTTACTAGATCTTCTTGATGTATTTGCTCCATCTG AAACCAAAGTGTCTAACAATACTCAAAATGCACCAGGATTTTTCAGGTGATTTATTTGGCACT AAAAATGGTTACGGTGCCCCT ATCATTCAAC                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD171511             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCAACTAATCAGTCGCTTACGATTTTCGA TTTATTGGGTCCAGAAAGTGAACCTGATTCTCATA TGACTCAAAGCGCGACCACGAATCATTCTGATACTGGGACTAATTTACTAGATCTTCTTGATGTATTTGCTCCATCTGAAAACCAAAGTGTCTAACAATACTCAAAATGCACCAGGA TTTTCAGGTGATTTATTTGGCACTAAAAAATGGTTACGGTGCCCCTAATATTTCAA                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD182240             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGATACTGGGACTAATTTACTAGATCTTCTTGATGTATTTGCTCCATCTG AAACCAAAGTGTCTAACAATACTCAAAATGCACCAGGA TTTTCAGGTGATTTATTTGGCACT AAAAATGGTTACGGTGCCCCT ATCATTCAACCTGCTCCGCAGCCTTCTGTCTTGGATTTCGACTTTGTCGATAATTCCGGTCCAGGTTTGACAAATCAAGTCTCGTCAATTCCATCCACCACGATATACAATTCGAATGAGATAAAAATTGTATTCAACTTCGTGCCTTCCGCTGTACTAGATGGTCATTNTAACATAAATCACATGCAGTTAGTGGGCACTACTACAAGTCTTCAGCCAATTAATTCTTTTGAATACAGGCTGCTGTACCCAAAATCTGTCAGTACAGCTTTTCCCACCATCGTCTAGTCTATTTCATGTGCCNTACTCTACTCCGC]


>consensus_10002#0 GTGGACACCATGATGAAATTGTTAACCACTGCTGGAAACTATGCTCGGGATGATGTCGTC TCATCTCTAGTTAGCCTGATTTCTCAAAATCATAGTCTACACGCGTACGCTACCGTTCAG CTTTTCAATGCTATGAATGGAGCTATGTCTCAACAACCTTTGGTTCAGGTCGCTTGTTGG ACAATCGGGGAATATGGTGATTTGTTGGTTTCTCCAGAACCTTCAGAAGATATTCCACAG CCAGTTACTGAATTAGAATTGATTACTGTGTTACAGCGTGCTCTGGTTAGTGTGACTTCA ACAGTGCAAACAAAGCAAATGGTTATAAACACACTTGTTAAACTAACCACACGTTTTACT CCAACACATTTAGAAAAACTAAAAGAACTCATTAGATTTTATTCGACTAATGTGAATCTG GAGCTGCAACAACGATCTGTTGAATACAGCAAAATTTGTTCACAACCTATAAGTATTCGT GGTGGTTTACTTGATTGCATGCCAGTACTACCAACAAATGCTTTGTCTGGAACTTCGAAT CCAGATAACCTGAGTCGTGGAATTAATGAATGTGATGTCATCGAAACTGAAGAAAGTAAC ACCGGAGGTGCAAAAACTCCATCAATTAATGGCTCAACTAATCAGTCGCTTACGATTTTC GATTTATTGGGTCCAGAAAGTGAACCTGATTCTCATATGACTCAAAGCGCGACCACGAAT CATTCTGATACTGGGACTAATTTACTAGATCTTCTTGATGTATTTGCTCCATCTGAAACC AAAGTGTCTAACAATACTCAAAATGCACCAGGATTTTCAGGTGATTTATTTGGCACTAAA AATGGTTACGGTGCCCCTATCATTCAACCTGCTCCGCAGCCTTCTGTCTTGGATTTCGAC TTTGTCGATAATTCCGGTCCAGGTTTGACAAATCAAGTCTCGTCAATTCCATCCACCACG ATATACAATTCGAATGAGATAAAAATTGTATTCAACTTCGTGCCTTCCGCTGTACTAGAT GGTCATTNTAACATAAATCACATGCAGTTAGTGGGCACTACTACAAGTCTTCAGCCAATT AATTCTTTTGAATACAGGCTGCTGTACCCAAAATCTGTCAGTACAGCTTTTCCCACCATC GTCTAGTCTATTTCATGTGCCNTACTCTACTCCGC



consensusID : consensus_10002#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 594
fasta sequence
                              [ACAATGGGTAATGCGAAATGTCATAGTTGATGGTGTTATATTTCTAAGTACATGAAGAAGAAAATCAATCCGAAAATTCGTATATCAGTCTTAAGTGATTTTCTTTCACTTAACTTTGCGTGTATTTTGTTTATTGATTCTTAGTTTGTTTCTAATTGTATCAATTCACTCAGTATCCAGTTACTTATTTGATTTCCTCTTTTATTGAATAATTCATTGTGACTGTACGTTCGGAGACAATTGGTCACTTTGTCATAATTCTGTAAAGAAAGCAAGCAAGCGATATACACTACAAAATGGAATTTCAACACAATGTGATGTGATTGAAGCTGATCTCGTCACTAATTTTATAGCTAAAGAAGTTACTAAGTGAATGGTCTTTGGAAATATTGTGATTATTAGGAATATTCCTGATACCCCCGCCCCGCTCAATTCTGTTAGGTACCCGATACTGAAAGCAGCTAGTCTTCTGGACAGCTCGTGCCAATATATCCGTTGTACCAACAATGCGTAACGTACTCATGCCAGACCTTGTTTAGATTTTCTTCTCATTCAGTTGCAGAAACTGAAGATTACGAACAGCTATTTGNTGCA]

[+] EMBL CD156909             [ACAATGGGTAATGCGAAATGTCATAGTTGATGGTGTTATATTTCTAAGTACATGAAGAAGAAAATCAATCCGAAAATTCGTATATCAGTCTTAAGTGATTTTCTTTCACTTAACTTTGCGTGTATTTTGTTTATTGATTCTTAGTTTGTTTCTAATTGTATCAATTCACTCAGTATCCAGTTACTTATTTGATTTCCTCTTTTATTGAATAATTCATTGTGACTGTACGTTCGGAGACAATTGGTCACTTTGTCATAATTCTGTAAAGAAAGCAAGCAAGCGATATACACTACAAAATGGAATTTCAACACAATGTGATGTGATTGAAGCTGATCTCGTCACTAATTTTATAGCTAAAGAAGTTACTAAGTGAATGGTCTTTGGAAATATTGTGATTATTAGGAATATTCCTGATACCCCCGCCCCGCTCAATTCTGTTAGGTACCCGATACTGAAAGCAGCTAGTCTTCTGGACAGCTCGTGCCAATATATCCGTTGTACCAACAATGCGTAACGTACTCATGCCAGACCTTGTTTAGATTTTCTTCTCATTCAGTTGCAGAAACTGAAGATTACGAACAGCTATTTGNTGCA]


>consensus_10002#1 ACAATGGGTAATGCGAAATGTCATAGTTGATGGTGTTATATTTCTAAGTACATGAAGAAG AAAATCAATCCGAAAATTCGTATATCAGTCTTAAGTGATTTTCTTTCACTTAACTTTGCG TGTATTTTGTTTATTGATTCTTAGTTTGTTTCTAATTGTATCAATTCACTCAGTATCCAG TTACTTATTTGATTTCCTCTTTTATTGAATAATTCATTGTGACTGTACGTTCGGAGACAA TTGGTCACTTTGTCATAATTCTGTAAAGAAAGCAAGCAAGCGATATACACTACAAAATGG AATTTCAACACAATGTGATGTGATTGAAGCTGATCTCGTCACTAATTTTATAGCTAAAGA AGTTACTAAGTGAATGGTCTTTGGAAATATTGTGATTATTAGGAATATTCCTGATACCCC CGCCCCGCTCAATTCTGTTAGGTACCCGATACTGAAAGCAGCTAGTCTTCTGGACAGCTC GTGCCAATATATCCGTTGTACCAACAATGCGTAACGTACTCATGCCAGACCTTGTTTAGA TTTTCTTCTCATTCAGTTGCAGAAACTGAAGATTACGAACAGCTATTTGNTGCA



consensusID : consensus_10002#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 586
fasta sequence
                              [TCATATGACTCAAAGCGCGACCACGAATCATTCTGATACTGGGACTAATNTACTAGATCTTCTTGATGTATNTGCTCCATCTGAAACCAAAGTGTCTAACAATACTCAAAATGCACCAGGATTTTCAGGTGATTTATTTGGCACTAAAAATGGTTACGGTGCCCCTATCATTCAACCTGCTCCGCAGCCTTCTGTCTTGGATTTCGACTTTGTCAATAATTCCGGTCCAGGTTTGACAAATCAAGAATTATGACAAAGTGACCAATTGTCTCCGAACGTACAGTCACAATGAATTATTCAATAAAAGAGGAAATCAAATAAGTAACTGGATACTGAGTGAATTGATACAATTAGAAACAAACTAAGAATCAATAAACAAAATACACGCAAAGTTAAGTGAAAGAAAGTCACTTAAAACTGATATACGAATTTTCGGATTGATTTTCTTCTTCATGTACTTAGAAATATAACACCATCAACTATGACATTTCGCATTACCCATTGTTTAAATTTTGTCGGAAGTCCTTAAAATTGTATGTTCTTATGTATTTATTTTTCGTTTTATTTCAGTATTTCAAAATAGGTA]

[-] EMBL CD153266             [TCATATGACTCAAAGCGCGACCACGAATCATTCTGATACTGGGACTAATNTACTAGATCTTCTTGATGTATNTGCTCCATCTGAAACCAAAGTGTCTAACAATACTCAAAATGCACCAGGATTTTCAGGTGATTTATTTGGCACTAAAAATGGTTACGGTGCCCCTATCATTCAACCTGCTCCGCAGCCTTCTGTCTTGGATTTCGACTTTGTCAATAATTCCGGTCCAGGTTTGACAAATCAAGAATTATGACAAAGTGACCAATTGTCTCCGAACGTACAGTCACAATGAATTATTCAATAAAAGAGGAAATCAAATAAGTAACTGGATACTGAGTGAATTGATACAATTAGAAACAAACTAAGAATCAATAAACAAAATACACGCAAAGTTAAGTGAAAGAAAGTCACTTAAAACTGATATACGAATTTTCGGATTGATTTTCTTCTTCATGTACTTAGAAATATAACACCATCAACTATGACATTTCGCATTACCCATTGTTTAAATTTTGTCGGAAGTCCTTAAAATTGTATGTTCTTATGTATTTATTTTTCGTTTTATTTCAGTATTTCAAAATAGGTA]


>consensus_10002#2 TCATATGACTCAAAGCGCGACCACGAATCATTCTGATACTGGGACTAATNTACTAGATCT TCTTGATGTATNTGCTCCATCTGAAACCAAAGTGTCTAACAATACTCAAAATGCACCAGG ATTTTCAGGTGATTTATTTGGCACTAAAAATGGTTACGGTGCCCCTATCATTCAACCTGC TCCGCAGCCTTCTGTCTTGGATTTCGACTTTGTCAATAATTCCGGTCCAGGTTTGACAAA TCAAGAATTATGACAAAGTGACCAATTGTCTCCGAACGTACAGTCACAATGAATTATTCA ATAAAAGAGGAAATCAAATAAGTAACTGGATACTGAGTGAATTGATACAATTAGAAACAA ACTAAGAATCAATAAACAAAATACACGCAAAGTTAAGTGAAAGAAAGTCACTTAAAACTG ATATACGAATTTTCGGATTGATTTTCTTCTTCATGTACTTAGAAATATAACACCATCAAC TATGACATTTCGCATTACCCATTGTTTAAATTTTGTCGGAAGTCCTTAAAATTGTATGTT CTTATGTATTTATTTTTCGTTTTATTTCAGTATTTCAAAATAGGTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10002#0      GTGGACACCATGATGAAATTGTTAACCACTGCTGGAAACTATGCTCGGGATGATGTCGTC 60
consensus_10002#2      ------------------------------------------------------------
consensus_10002#1      ------------------------------------------------------------
                                                                                   

consensus_10002#0      TCATCTCTAGTTAGCCTGATTTCTCAAAATCATAGTCTACACGCGTACGCTACCGTTCAG 120
consensus_10002#2      ------------------------------------------------------------
consensus_10002#1      ------------------------------------------------------------
                                                                                   

consensus_10002#0      CTTTTCAATGCTATGAATGGAGCTATGTCTCAACAACCTTTGGTTCAGGTCGCTTGTTGG 180
consensus_10002#2      ------------------------------------------------------------
consensus_10002#1      ------------------------------------------------------------
                                                                                   

consensus_10002#0      ACAATCGGGGAATATGGTGATTTGTTGGTTTCTCCAGAACCTTCAGAAGATATTCCACAG 240
consensus_10002#2      ------------------------------------------------------------
consensus_10002#1      ------------------------------------------------------------
                                                                                   

consensus_10002#0      CCAGTTACTGAATTAGAATTGATTACTGTGTTACAGCGTGCTCTGGTTAGTGTGACTTCA 300
consensus_10002#2      ------------------------------------------------------------
consensus_10002#1      ------------------------------------------------------------
                                                                                   

consensus_10002#0      ACAGTGCAAACAAAGCAAATGGTTATAAACACACTTGTTAAACTAACCACACGTTTTACT 360
consensus_10002#2      ------------------------------------------------------------
consensus_10002#1      ------------------------------------------------------------
                                                                                   

consensus_10002#0      CCAACACATTTAGAAAAACTAAAAGAACTCATTAGATTTTATTCGACTAATGTGAATCTG 420
consensus_10002#2      ------------------------------------------------------------
consensus_10002#1      ------------------------------------------------------------
                                                                                   

consensus_10002#0      GAGCTGCAACAACGATCTGTTGAATACAGCAAAATTTGTTCACAACCTATAAGTATTCGT 480
consensus_10002#2      ------------------------------------------------------------
consensus_10002#1      ------------------------------------------------------------
                                                                                   

consensus_10002#0      GGTGGTTTACTTGATTGCATGCCAGTACTACCAACAAATGCTTTGTCTGGAACTTCGAAT 540
consensus_10002#2      ------------------------------------------------------------
consensus_10002#1      ------------------------------------------------------------
                                                                                   

consensus_10002#0      CCAGATAACCTGAGTCGTGGAATTAATGAATGTGATGTCATCGAAACTGAAGAAAGTAAC 600
consensus_10002#2      ------------------------------------------------------------
consensus_10002#1      ------------------------------------------------------------
                                                                                   

consensus_10002#0      ACCGGAGGTGCAAAAACTCCATCAATTAATGGCTCAACTAATCAGTCGCTTACGATTTTC 660
consensus_10002#2      ------------------------------------------------------------
consensus_10002#1      -----------------------------------------------------------A 1
                                                                                   

consensus_10002#0      GATTTATTGGGTCCAGAAAGTGAACCTGATTCTCATATGACTCAAAGCGCGACCACGAAT 720
consensus_10002#2      --------------------------------TCATATGACTCAAAGCGCGACCACGAAT 28
consensus_10002#1      CAATGGGTAATGCGAAATGTCATAGTTGATGGTGTTATATTTCTAAGTAC-ATGAAGAAG 60
                                                       *  ***   ** ***  * *  * *** 

consensus_10002#0      CATTCTGATACTGGGACTAATTTACTAGATCTTCTTGATGTATTTGCTCCA---TCTGAA 777
consensus_10002#2      CATTCTGATACTGGGACTAATNTACTAGATCTTCTTGATGTATNTGCTCCA---TCTGAA 85
consensus_10002#1      AAAATCAATCCGAAAATTCGTATATCAGTCTTAAGTGATTTTCTTTCACTTAACTTTGCG 120
                        *     ** *    * *  * **  **   *   **** *   * * *     * **  

consensus_10002#0      ACCAAAGTGTCTAACAATACTCAAAATGCACCAGGATTTTCAGGTGATTTATTTGGCACT 837
consensus_10002#2      ACCAAAGTGTCTAACAATACTCAAAATGCACCAGGATTTTCAGGTGATTTATTTGGCACT 145
consensus_10002#1      TGTATTTTGTTTATTGATTCTTAGTTTGTTTCTAATTGTAT---CAATTCACTCAGTATC 177
                          *   *** **   ** ** *   **   *    * *       *** * *  * *  

consensus_10002#0      AAA--AATGGTTACGGTGCCCCTATCATTCAACC-TGCTCCGCAGCCTTCTGTCTTGG-- 892
consensus_10002#2      AAA--AATGGTTACGGTGCCCCTATCATTCAACC-TGCTCCGCAGCCTTCTGTCTTGG-- 200
consensus_10002#1      CAGTTACTTATTTGATTTCCTCTTTTATTGAATAATTCATTGTGACTGTACGTTCGGAGA 237
                        *   * *  **    * ** ** * *** **   * *   *   *  *  **   *   

consensus_10002#0      -ATTTCG--ACTTTGTCGATAATTCCGGTCCAGGTTTGACAAATCAAGTCTCGT--CAAT 947
consensus_10002#2      -ATTTCG--ACTTTGTCAATAATTCCGGTCCAGGTTTGACAAATCAAGAATTATGACAAA 257
consensus_10002#1      CAATTGGTCACTTTGTC-ATAATTCTGTAAAGAAAGCAAGCAAGCGATATACACTACAAA 296
                        * ** *  ******** ******* *           *  ** * *         *** 

consensus_10002#0      TCCATCCACCAC-----GATA-TACAATTCGAATGAG-------ATAAAAATTGTATTCA 994
consensus_10002#2      GTGACCAATTGTCTCCGAACG-TACAGTCACAATGAATTATTCAATAAAAGAGGAAATCA 316
consensus_10002#1      ATGGAATTTCAACACAATGTGATGTGATTGAAGCTGATCTCGTCACTAATTTTATAGCTA 356
                                             *    *   *            *  **      *   *

consensus_10002#0      ACTTCGTGCCTTC-CGCTGTACTAGATGGT-CATTNTAACATAAATCACATGCAGTTAGT 1052
consensus_10002#2      AATAAGTAACTGGATACTGAGTGAATTGATACAATTAGAAACAAACTAAGAATCAATAAA 376
consensus_10002#1      AAGAAGTTACTAAGTGAATGGTCTTTGGAAATATTGTGATT---ATTAGGAAT--ATTCC 411
                       *    **  **                *    * *   *     *  *        *   

consensus_10002#0      GGGCACTACTACAAGTCTTCAGCCAATTAATTCTTTTGAA-------TA-CAGGCTGCTG 1104
consensus_10002#2      CAAAATACACGCAAAGTTAAGTGAAAGAAAGTCACTTAAAACTGATATA-CGAATTTTCG 435
consensus_10002#1      TGATACCCCCGCCCCGCTCAATTCTGTTAGGTACCCGATACTGAAAGCAGCTAGTCTTCT 471
                           *      *     *          *  *       *        * *         

consensus_10002#0      TACCCAAAATCTG-TCAGTACAGCT-----TTTCCCACCATCGTCTAGTCTATTTCATGT 1158
consensus_10002#2      GATTGATTTTCTTCTTCATGTACTTAGAAATATAACACCATCAACTATGACATTTCGCAT 495
consensus_10002#1      GGACAG--CTCGTGCCAATATATCCGT---TGTACCAACAATGCGTAACGTACT-CATGC 525
                                **       *  *        * *  ** **     **    * * *    

consensus_10002#0      GCCNTACTCT----ACTCCGC--------------------------------------- 1175
consensus_10002#2      TACCCATTGTTTAAATTTTGTCGGAAGTCCTTAAAATTGTATGTTCTTATGTATTTATTT 555
consensus_10002#1      CAGACCTTGTTTAGATTTTCTT-----CTCATTCAGTTGCAGAAACTGAAGATTACGAAC 580
                              * *    * *                                           

consensus_10002#0      -------------------------------
consensus_10002#2      TTCGTTTTATTTCAGTATTTCAAAATAGGTA 586
consensus_10002#1      AGCTATTTGNTGCA----------------- 594
                                                      




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)