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Schistosoma mansoni
cluster # 10034 cluster # 10034       Sequences # 13       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10034#0 length = 1313 sequences # 11  
consensus_10034#1 length = 623 sequences # 1  
consensus_10034#2 length = 511 sequences # 1  

consensusID : consensus_10034#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1313
fasta sequence
                              [TAATTTAAATCATAACC-TACTGCTGGGTTTGGGTCATTCTAATTATTATCTT--TAGTGACCTCTAAAACTATAACATAACTGTTTCTTTATATTCTTACCGTATTCCACACGGTTCTTGTTCATCATACTACATTCTTGCCAAAACAAATGTCCATAAACCAATGGTACTACCATTTGTTTTCGCCAGAATACATTGTTGTTGATAGAAAGCTTTTAAGAAAAAATACGCTTTGTTTTATATGTAATCAAACTGGACATGTTGCATTTGAATGTCCAAGCAATAAAAAGAAAAATAAAAGGGAGAATTCTGATATAGTTGC-ATTACATTCACTGATTGGTCATTTTTTACATAAAACTCAAGCATCACAGTCAAATTCACAGAAACCAATGGATCAACATTATGATAATTCAAATCAAAATCGCCAGTTGAATTCGACTAGTACTGTTTGTAAAACCTTTCGTAAACCTAATAATACTCCAACAAACATATCATCACATACCTATAGGAATCCTTTCAAACCACAAAATAGTTATCAAGTTCAACAGATAAGAAATAATTTTCAGCA-ACAACCTTTCATTTCTAATTATCATCATGTACAACCGCATCATGTAAATATGCCTACTAATTTGAATTCGATACTTCCGTCAGTACCGTACCCAACTCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACTATGGTTTCATGCCTAACAGTTTATCAAATCACCTTGTGCAATCTAATGTCTACGATCGACAACAATCCTTTCCTCCGTCCTATTATTCACCACCTCTTGGTTGTGTAAACAATCAACAACAATATAAAAATACCATACAAGCGAATCACCCAGTTAATTACCGACCAAAAGGTCAACAAAATAATAATAATGAGACTAAAAATTATCA-TAAATTCAGTC-GGTATCTAGTTCAAGTGTTT-ATC-AGAACAATTGCCATCTGTTACATCAAACCATCCAATAGCTGTTACGTCTAATAAATCTCCGTGTAAGCCAAAAAAATATAACAATAATCAGAATGTGTCTAATCCTCATCAAACTAATAGTGTATTACGAAAATCACACAATCATGAATTTGAATCTTCCTTTGCCAAAGATTCAAACTGCAATAATCCTGGAATCATTAATGATCATACTTCTAAAAGTGCTTTGCCATCCTCAGGGAATCAGACAAATAGTTGCAGTACAACATCATATCGACAAAAACAATCCAATTCTCCAGTGAAAGTTAAATCAAATTTTCAACAATCCCCACAAAAGGCGAAATGCTCAGTATCTAATGGATGTGTTATAG]

[-] EMBL CD153130             [TAATTTAAATCATAACC TACTGCTGGGTTTGGGTCATTCTAATTATTATCTT  TAGTGACCTCTAAAACTATAACATAACTGTTTCTTTATATTCTTACCGTATTCCACACGGTTCTTGTTCATCATACTACATTCTTGCCAAAACAAATGTCCATAAACCAATGGTACTACCATTTGTTTTCGCCAGAATACATTGTTGTTGATAGAAAGCTTTTAAGAAAAAATACGCTTTGTTTTATATGTAATCAAACTGGACATGTTGCATTTGAATGTCCAAGCAATAAAAAGAAAAATAAAAGGGAGAATTCTGATATAGTTGC ATTACATTCACTGATTGGTCATTTTTTACATAAAACTCAAGCATCACAGTCAAATTCACAGAAACCAATGGATCAACATTATGATAATTCAAATCAAAATCGCCAGTTGAATTCGACTAGTACTGTTTGTAAAACCTTTCGTAAACCTAATAATACTCCAACAAACATATCATCACATACCTATAGGAATCCTTTCAAACCACAAAATAGTTATCAAGTTCAACAGATAAGAAATAATTTTCAGCAGACAACCTTTCATTTCTAATTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD153123             [ttATTTAAATCATAACCTTACTGCT GGTTGGGGTCATTCTAAATA TATCTTNNTA TTACCTCTAAAACTATAACATAACTGTTTCTTTATATTCCTACCGTATTCCACACGGTTCTTGTTCATCATACTACATTCTTGCCAAAACAAATGTCCATAAACCAATGGTACTACCATTTGTTTTCGCCAGAATACATTGTTGTTGATAGAAAGCTTTTAAGAAAAAATACGCTTTGTTTTATATGTAATCAAACTGGACATGTTGCATTTGAATGTCCAAGCAATAAAAAGAAAAATAAAAGGGAGAATTCTGATATAGTTGC ATTACATTCACTGATTGGTCATTTTTTACATAAAACTCAAGCATCACAGTCAAATTCACAGAAACCAATGGATCAACATTATGATAATTCAAATCAAAATCGCCAGTTGAATTCGACTAGTACTGTTTGCAAAACCTTTCGTAAACCTAATAATACTCCAACAAACATATCATCACATACCTATAGGAATCCTTTCAAACCACAAAATAGTTATCAAGTTCAACAGATAAGAAATAATTTTCAGCA ACAACCTTTCATTTCTAATTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD116056             [                                                                                                                                                                                                                                                                               AATGTCCAAGCAATAAAAAGAAAAATAAAAGGGAGAATTCTGATATAGTTGC ATTACATTCACTGATTGGTCATTTTTTACATAAAACTCAAGCATCACAGTCAAATTCACAGAAACCAATGGATCAACATTATGATAATTCAAATCAAAATCGCCAGTTGAATTCGACTAGTACTGTTTGTAAAACCTTTCGTAAACCTAATAATACTCCAACAAACATATCATCACATACCTATAGGAATCCTTTCAAACCACAAAATAGTTATCAAGTTCAACAGATAAGAAATAATTTTCAGCA ACAACCTTTCATTTCTAATTATCATCATGTACAACCGCATCATGTAAGTATGCCTACTAATTTGAATTCGATACTTCCGTCAGTACCGTACCCAACTCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAGCTATGGTTTCATGCCTAACAGTTTATCAAATCACCTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD153466             [                                                                                                                                                                                                                                                                                               AAAGAAAAATAAAAGGGAGAATTNTGATATAGTTGC ATTACATTCACTGATTGGTCATTTNTTACATAAAACTCAAGCATCACAGTCAAATTCACAGAAACCAATGGATCAACATTATGATAATTCAAATCAAAATCGCCAGTTGAATTCGACTAGTACTGTTTGTAAAACCTTTCGTAAACCTAATAATACTCCAACAAACATATCATCACATACCTATAGGAATCCTTTCAAACCACAAAATAGTTATCAAGTTCAACAGATAAGAAATAATTTTCAGCA ACAACCTTTCATTTCTAATTATCATCATGTACAACCGCATCATGTAAATATGCCTACTAATTTGAATTCGATACTTCCGTCAGTACCGTACCCAACTCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACTATGGTTTCATGCCTAACAGTTTATCAAATCACCTTGTGCAATCTAATGTCTACGATCGACAACAATCCTTTCCTCCGTCCTATTATTCACCACCTCTTGGTTGTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD152972             [                                                                                                                                                                                                                                                                                                                         ATATAG TGCGATTACATTCACTGATTGGTCATTTTTTACATAAAACTCAAGCATCACAGTCAAATTCACAGAAACCAATGGATCAACATTATGATAATTCAAATCAAAATCGCCAGTTGAATTCGACTAGTACTGTTTGTAAAACCTTTCGTAAACCTAATAATACTCCAACAAACATATCATCACATACCTATAGGAATCCTTTCAAACCACAAAATAGTTATCAAGTTCAACAGATAAGAAATAATTTTCAGCA ACAACCTTTCATTTCTAATTATCATCATGTACAACCGCATCATGTAAATATGCCTACTAATTTGAATTCGATACTTCCGTCAGTACCGTACCCAACTCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACTATGGTTTCATGCCTAACAGTTTATCAAATCACCTTGTGCAATCTAATGTCTACGATCGACAACAATCCTTTCCTCCGTCCTATTGTTCACCACCTCTTGGTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD150699             [                                                                                                                                                                                                                                                                                                                           ATAGTTGC ATTACATTCACTGATTGGTCATTTTTTACATAAAACTCAAGCATCACAGTCAAATTCACAGAAACCAATGGATCAACATTATGATAATTCAAATCAAAATCGCCAGTTGAATTCGACTAGTACTGTTTGTAAAACCTTTCGTAAACCTAATAATACTCCAACAAACATATCATCACATACCTATAGGAATCCTTTCAAACCACAAAATAGTTATCAAGTTCAACAGATAAGAAATAATTTTCAGCA ACAACCTTTCATTTCTAATTATCATCATGTACAACCGCATCATGTAAATATGCCTACTAATTTGAATTCGATACTTCCGTCAGTACCGTACCCAACTCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACTATGGTTTCATGCCTAACAGTTTATCAAATCACCTTGTGCAATCTAATGTCTACGATCGACAACAATCCTTTCCTCCGTCCTATTATTCACCACCTCTTGGTTGTGTAAACAATCAACAACAATATAAAAATACCATACCAGCGAATCACCCAGTTAATTACCGACCCAAAGGTNCACANAATAATAATAATGAGACTAAAAATTATCATTAATTTCAGTC GGTATCTAGTTCAAGTGTTTAATC AGAACAATTGCCATCTGTTACATCAAACCATNCAATAGCTATTACG                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD153431             [                                                                                                                                                                                                                                                                                                                                                   TGGTCATGTTTTACATAAAACTCAAGCATCACAGTCAAATTCACAGAAACCAATGGATCAACATTATGATAGTTCAAATCAAAATCGCCAGTTGAATTCGACTAGTACTGTTTGTAAAACCTTTCGTAAACCTAATAATACTCCAACAAACATATCATCACATACCTATAGGAATCCTTTCAATCCACAAAATAGTTATCAAGTTCAACAGATAAGAAATAATTTTCAGCA ACAACCTTTCATTTCTAATTATCATCATGTACAACCGCATCATGTAAATATGCCTACTAATTTGAATTCGATACTTCCGTCAGTACCGTACCCAACTCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACTATGGTTTCATGCCTAACAGTTTATCAAATCACCTTGTGCAATCTAATGTCTACGATCGACAACAATCCTTTCCTCCGTCCTATTATTCACCACCTCTTGGTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD125790             [                                                                                                                                                                                                                                                                                                                                                                                                                           aTCAAATCAAAATCGCCAGTTGAATTCGACTAGTACTG TTGTAAAACCTTTCGTAAACCTAATAATACTCCAACAAACATATCATCACATACCTATAGGAATCCTTTCAAACCACAAAATAGTTATCAAGTTCAACAGATAAGAAATAATTTACAGCA ACAACCTTTCATTTCTAATTATCATCATGTACAACCGCATCATGTAAATATGCCTACTAATTTGAATTCGATACTTCCGTCAGTACCGTACCCAACTCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACTATGGTTTCATGCCTAACAGTTTATCAAATCACCTTGTGCAATCTAATGTCTACGATCGACAACAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD150697             [                                                                                                                                                                                                                                                                                                                                                                                                                              AAATCANAATCGCCAGTTGAATTCGACTAGTACTGTNTGTANAACCTTTCGTAAACCTAATAATACTCCAACAAACATATCATCACATACCTATAGGAATCCTTTCAAACCACAAAATAGTTATCAAGTTCAACAGATAAGAAATAATTTTCAGCA ACAACCTTTCATTTCTAATTACCATCATGTACAACCGCATCATGTAAATATGCCTACTAATTTGAATTCGATACTTCCGTCAGTACCGTACCCAACTCCACTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACTATGGTTTCATGCCTAACAGTTTATCAAATCACCTTGTGCAATCTAATGTCTACGATCGACAACAATCCTTTCCTCCGTCCTATTATTCACCACCTCTTGGTTGTGTAAACAAGCAACAACAATATAAAAATACCATACAAGCGAATCACCCAGTTAATTACCGACCAAAAGGTCAACAAAATAATAATAATGAGACTAAAAATTATCA TAAATTCAGTCGGGTATCTAGTTCAAGTGTTT ATCAAGAACAATTGCCATCTGTTACATCAAACCATCCAATAGCTGTTACGT                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD166602             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CACATACCTATAGGAATCCTTTC AACCACAAAATAGTTAT AAGTTCAACAGATAAGAAATAATTTTCAGCA ACAACCTTTCATTTCTAATTATCATCATGTACAACCGCATCATGTAAATATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD133743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGTAAACAATCANCAACAATATAAAAATACCATACAAGCGAATCACCCAGTTAATTACCGACCAAAAGGTCAACAAAATAATAATAATGAGACTAAAAATTATCA TAAATTCAGTCGGGTATCTAGTTCAAGTGTTT ATCAAGAACAATTGCCATCTGTTACATCAAACCATCCAATAGCTGTTACGTCTAATAAATCTCCGTGTAAGCCAAAAAAATATAACAATAATCAGAATGTGTCTAATCCTCATCAAACTAATAGTGTATTACGAAAATCACACAATCATGAATTTGAATCTTCCTTTGCCAAAGATTCAAACTGCAATAATCCTGGAATCATTAATGATCATACTTCTAAAAGTGCTTTGCCATCCTCAGGGAATCAGACAAATAGTTGCAGTACAACATCATATCGACAAAAACAATCCAATTCTCCAGTGAAAGTTAAATCAAATTTTCAACAATCCCCACAAAAGGCGAAATGCTCAGTATCTAATGGATGTGTTATAG]


>consensus_10034#0 TAATTTAAATCATAACCTACTGCTGGGTTTGGGTCATTCTAATTATTATCTTTAGTGACC TCTAAAACTATAACATAACTGTTTCTTTATATTCTTACCGTATTCCACACGGTTCTTGTT CATCATACTACATTCTTGCCAAAACAAATGTCCATAAACCAATGGTACTACCATTTGTTT TCGCCAGAATACATTGTTGTTGATAGAAAGCTTTTAAGAAAAAATACGCTTTGTTTTATA TGTAATCAAACTGGACATGTTGCATTTGAATGTCCAAGCAATAAAAAGAAAAATAAAAGG GAGAATTCTGATATAGTTGCATTACATTCACTGATTGGTCATTTTTTACATAAAACTCAA GCATCACAGTCAAATTCACAGAAACCAATGGATCAACATTATGATAATTCAAATCAAAAT CGCCAGTTGAATTCGACTAGTACTGTTTGTAAAACCTTTCGTAAACCTAATAATACTCCA ACAAACATATCATCACATACCTATAGGAATCCTTTCAAACCACAAAATAGTTATCAAGTT CAACAGATAAGAAATAATTTTCAGCAACAACCTTTCATTTCTAATTATCATCATGTACAA CCGCATCATGTAAATATGCCTACTAATTTGAATTCGATACTTCCGTCAGTACCGTACCCA ACTCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACTATGGTTTCATGCCTAAC AGTTTATCAAATCACCTTGTGCAATCTAATGTCTACGATCGACAACAATCCTTTCCTCCG TCCTATTATTCACCACCTCTTGGTTGTGTAAACAATCAACAACAATATAAAAATACCATA CAAGCGAATCACCCAGTTAATTACCGACCAAAAGGTCAACAAAATAATAATAATGAGACT AAAAATTATCATAAATTCAGTCGGTATCTAGTTCAAGTGTTTATCAGAACAATTGCCATC TGTTACATCAAACCATCCAATAGCTGTTACGTCTAATAAATCTCCGTGTAAGCCAAAAAA ATATAACAATAATCAGAATGTGTCTAATCCTCATCAAACTAATAGTGTATTACGAAAATC ACACAATCATGAATTTGAATCTTCCTTTGCCAAAGATTCAAACTGCAATAATCCTGGAAT CATTAATGATCATACTTCTAAAAGTGCTTTGCCATCCTCAGGGAATCAGACAAATAGTTG CAGTACAACATCATATCGACAAAAACAATCCAATTCTCCAGTGAAAGTTAAATCAAATTT TCAACAATCCCCACAAAAGGCGAAATGCTCAGTATCTAATGGATGTGTTATAG



consensusID : consensus_10034#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 623
fasta sequence
                              [TCGATTTGTTTTCACACACAAATTAATGATCATTATTCTTTTCTTTCAGAAATATCTTGAGGATGTCATAAATTACAATCTAAAGAAAGAATCAAGTAAATTTAAGACGAAGCTCGGTCATTATATGTCGTAGCATTCACTGAACTCATTTATGTTATCCATCTTTAACAGACGATCTTAAATTCATCAATCCAGTTAAAAAATGGAAAACAGTAATGATATTATGGGTTGTAACGACTGATAAGGCTATTATTAACCGTTTTCTTTTTCCAAATCCGGTACTTCAGAAAATCATTCTTATTGACAAGTAGTAAACATCTGGGTATTGACATTTATCTTAGTTATATTCATTTGCTTTCTTTTTGTAAAGTCCTTATGATTAATTATTTTATTTTTCTTGCACCAAATTTAACTTTTCTAGTGTTTCTTTATATTCTTACCGTATTCCACACGGTTCTTGTTCATCATACTACATTCTTGCCAAAACAAATGTCCATAAACCAATGGTACTACCATTTGTTTTCGCCAGAATACATTGTTGTTGATAGAAAGCTTTTAAGAAAAAATACGCTTTGTTTTATATGTAATCAAACTGGACATGTTGCATTTGAATGTCCAAGCAA]

[+] EMBL CD116983             [TCGATTTGTTTTCACACACAAATTAATGATCATTATTCTTTTCTTTCAGAAATATCTTGAGGATGTCATAAATTACAATCTAAAGAAAGAATCAAGTAAATTTAAGACGAAGCTCGGTCATTATATGTCGTAGCATTCACTGAACTCATTTATGTTATCCATCTTTAACAGACGATCTTAAATTCATCAATCCAGTTAAAAAATGGAAAACAGTAATGATATTATGGGTTGTAACGACTGATAAGGCTATTATTAACCGTTTTCTTTTTCCAAATCCGGTACTTCAGAAAATCATTCTTATTGACAAGTAGTAAACATCTGGGTATTGACATTTATCTTAGTTATATTCATTTGCTTTCTTTTTGTAAAGTCCTTATGATTAATTATTTTATTTTTCTTGCACCAAATTTAACTTTTCTAGTGTTTCTTTATATTCTTACCGTATTCCACACGGTTCTTGTTCATCATACTACATTCTTGCCAAAACAAATGTCCATAAACCAATGGTACTACCATTTGTTTTCGCCAGAATACATTGTTGTTGATAGAAAGCTTTTAAGAAAAAATACGCTTTGTTTTATATGTAATCAAACTGGACATGTTGCATTTGAATGTCCAAGCAA]


>consensus_10034#1 TCGATTTGTTTTCACACACAAATTAATGATCATTATTCTTTTCTTTCAGAAATATCTTGA GGATGTCATAAATTACAATCTAAAGAAAGAATCAAGTAAATTTAAGACGAAGCTCGGTCA TTATATGTCGTAGCATTCACTGAACTCATTTATGTTATCCATCTTTAACAGACGATCTTA AATTCATCAATCCAGTTAAAAAATGGAAAACAGTAATGATATTATGGGTTGTAACGACTG ATAAGGCTATTATTAACCGTTTTCTTTTTCCAAATCCGGTACTTCAGAAAATCATTCTTA TTGACAAGTAGTAAACATCTGGGTATTGACATTTATCTTAGTTATATTCATTTGCTTTCT TTTTGTAAAGTCCTTATGATTAATTATTTTATTTTTCTTGCACCAAATTTAACTTTTCTA GTGTTTCTTTATATTCTTACCGTATTCCACACGGTTCTTGTTCATCATACTACATTCTTG CCAAAACAAATGTCCATAAACCAATGGTACTACCATTTGTTTTCGCCAGAATACATTGTT GTTGATAGAAAGCTTTTAAGAAAAAATACGCTTTGTTTTATATGTAATCAAACTGGACAT GTTGCATTTGAATGTCCAAGCAA



consensusID : consensus_10034#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 511
fasta sequence
                              [TCGAGGCCAGATCGGCACGAGGTGTAAATATGCCTACTAATTTGAATCGATACTTCCGTCAGTACCGTACCCAACTCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACTATGGTTTCATGCCTAACAGTTTATCAAATCACCTTGTGCAATCTAATGTCTACGATCGACAACAATCCTTTCCTCCGTCCTATTATTCACCACCTCTTGGTTGTGTAAACAATCAACAACAATATAAAAATACCATACAAGCGAATCACCCAGTTAATTACCGACCAAAAGGTCAACAAAATAATAATAATGAGACTAAAAATTATCATAAATTCAGTCGGGTATCTAGTTCAAGTGTTTATCAAGAACAATTGCCATCTGTTACATCAAACCATCCAATAGCTGTTACGTCTAATAAATCTCCGTGTAAGCCAAAAAAATATAACAATAATCAGAATGTGTCTAATCCTCATCAAACTAATAGTGTATTACGAAAATCACACAATCATGAATTT]

[+] EMBL CD083442             [TCGAGGCCAGATCGGCACGAGGTGTAAATATGCCTACTAATTTGAATCGATACTTCCGTCAGTACCGTACCCAACTCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACTATGGTTTCATGCCTAACAGTTTATCAAATCACCTTGTGCAATCTAATGTCTACGATCGACAACAATCCTTTCCTCCGTCCTATTATTCACCACCTCTTGGTTGTGTAAACAATCAACAACAATATAAAAATACCATACAAGCGAATCACCCAGTTAATTACCGACCAAAAGGTCAACAAAATAATAATAATGAGACTAAAAATTATCATAAATTCAGTCGGGTATCTAGTTCAAGTGTTTATCAAGAACAATTGCCATCTGTTACATCAAACCATCCAATAGCTGTTACGTCTAATAAATCTCCGTGTAAGCCAAAAAAATATAACAATAATCAGAATGTGTCTAATCCTCATCAAACTAATAGTGTATTACGAAAATCACACAATCATGAATTT]


>consensus_10034#2 TCGAGGCCAGATCGGCACGAGGTGTAAATATGCCTACTAATTTGAATCGATACTTCCGTC AGTACCGTACCCAACTCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACTATGG TTTCATGCCTAACAGTTTATCAAATCACCTTGTGCAATCTAATGTCTACGATCGACAACA ATCCTTTCCTCCGTCCTATTATTCACCACCTCTTGGTTGTGTAAACAATCAACAACAATA TAAAAATACCATACAAGCGAATCACCCAGTTAATTACCGACCAAAAGGTCAACAAAATAA TAATAATGAGACTAAAAATTATCATAAATTCAGTCGGGTATCTAGTTCAAGTGTTTATCA AGAACAATTGCCATCTGTTACATCAAACCATCCAATAGCTGTTACGTCTAATAAATCTCC GTGTAAGCCAAAAAAATATAACAATAATCAGAATGTGTCTAATCCTCATCAAACTAATAG TGTATTACGAAAATCACACAATCATGAATTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10034#0      TAATTTAAATCATAACCTACTGCTGGGTTTGGGTCATTCTAATTATTATCTTTAGTGACC 60
consensus_10034#2      ------------------------------------------------------------
consensus_10034#1      ------------------------------------------------------------
                                                                                   

consensus_10034#0      TCTAAAACTATAACATAACTGTTTCTTTATATTCTTACCGTATTCCACACGGTTCTTGTT 120
consensus_10034#2      ------------------------------------------------------------
consensus_10034#1      ------------------------------------------------------------
                                                                                   

consensus_10034#0      CATCATACTACATTCTTGCCAAAACAAATGTCCATAAACCAATGGTACTACCATTTGTTT 180
consensus_10034#2      ------------------------------------------------------------
consensus_10034#1      ------------------------------------------------------------
                                                                                   

consensus_10034#0      TCGCCAGAATACATTGTTGTTGATAGAAAGCTTTTAAGAAAAAATACGCTTTGTTTTATA 240
consensus_10034#2      ------------------------------------------------------------
consensus_10034#1      ------------------------------------------------------------
                                                                                   

consensus_10034#0      TGTAATCAAACTGGACATGTTGCATTTGAATGTCCAAGCAATAAAAAGAAAAATAAAAGG 300
consensus_10034#2      ------------------------------------------------------------
consensus_10034#1      ------------------------------------------------------------
                                                                                   

consensus_10034#0      GAGAATTCTGATATAGTTGCATTACATTCACTGATTGGTCATTTTTTACATAAAACTCAA 360
consensus_10034#2      ------------------------------------------------------------
consensus_10034#1      ------------------------------------------------------------
                                                                                   

consensus_10034#0      GCATCACAGTCAAATTCACAGAAACCAATGGATCAACATTATGATAATTCAAATCAAAAT 420
consensus_10034#2      ------------------------------------------------------------
consensus_10034#1      ------------------------------------------------------------
                                                                                   

consensus_10034#0      CGCCAGTTGAATTCGACTAGTACTGTTTGTAAAACCTTTCGTAAACCTAATAATACTCCA 480
consensus_10034#2      ------------------------------------------------------------
consensus_10034#1      ------------------------------------------------------------
                                                                                   

consensus_10034#0      ACAAACATATCATCACATACCTATAGGAATCCTTTCAAACCACAAAATAGTTATCAAGTT 540
consensus_10034#2      ------------------------------------------------------------
consensus_10034#1      ------------------------------------------------TCGATTTGTTTT 12
                                                                                   

consensus_10034#0      CAACAGATAAGAAATAATTTTCAGCAACAACCTTTCATTTCTAATTATCATCATGTACAA 600
consensus_10034#2      --------------------------------------------TCGAGGCCAGATCGG- 15
consensus_10034#1      CACACACAAATTAATGATCATTATTCTTTTCTTTCAGAAATATCTTGAGGATGTCATAAA 72
                                                                   *               

consensus_10034#0      CCGCATCATGTAAATATG-CCTACTAATTTGAATTCGATACTTCCGTCAGTACCGTACCC 659
consensus_10034#2      -CACGAGGTGTAAATATG-CCTACTAATTTGAAT-CGATACTTCCGTCAGTACCGTACCC 72
consensus_10034#1      TTACAATCTAAAGAAAGAATCAAGTAAATTTAAGACGAAGCT-CGGTCATTATATGTCGT 131
                          *    *  * * *    * * *** ** **  ***  ** * **** **     *  

consensus_10034#0      AAC-TCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACT-ATGGTTTCATGCCT 717
consensus_10034#2      AAC-TCCTCTGCTTCCGAATAATACTGTTGGCTTTATCCCTAACT-ATGGTTTCATGCCT 130
consensus_10034#1      AGCATTCACTGAACTCATTTA----TGTTA--TCCATCTTTAACAGACGATCTTAAATTC 185
                       * * * * ***    *   **    ****   *  ***  ****  * * * * *     

consensus_10034#0      AACAGTTTA-TCAAATCACCTTGTGCAAT-------CTAATGTCTACGATCGACAACAAT 769
consensus_10034#2      AACAGTTTA-TCAAATCACCTTGTGCAAT-------CTAATGTCTACGATCGACAACAAT 182
consensus_10034#1      ATCAATCCAGTTAAAAAATGGAAAACAGTAATGATATTATGGGTTGTAACGACTGATAAG 245
                       * ** *  * * ***  *       ** *        **  *  *   *      * ** 

consensus_10034#0      CCTTTCCTCCGTCCTATTATTCACCACCTCTTGGTTGTGTAAACAATCAACAACAATATA 829
consensus_10034#2      CCTTTCCTCCGTCCTATTATTCACCACCTCTTGGTTGTGTAAACAATCAACAACAATATA 242
consensus_10034#1      GCTATTATTAACCGTTTTCTTTTTCCAAATCCGGTACTTCAGAAAATCATTCTTATTG-A 304
                        ** *  *    * * ** **   *       ***  *  * * *****     * *  *

consensus_10034#0      AAAATACCATACAAGCGAATCACCCAGTTAATTACCGACCAAAAGGTCAACAAAATAATA 889
consensus_10034#2      AAAATACCATACAAGCGAATCACCCAGTTAATTACCGACCAAAAGGTCAACAAAATAATA 302
consensus_10034#1      CAAGTAGTAAACATCTGGGTATTGACATTTATCTTAGTTATATTCATTTGCTTTCTTTTT 364
                        ** **  * ***   *  *       ** **    *    *    *   *    *  * 

consensus_10034#0      ATAATGAGACTAAAAATTATCATAAATTCAGTCGG-TATCTAGTTCAAGTGTTTATCA-G 947
consensus_10034#2      ATAATGAGACTAAAAATTATCATAAATTCAGTCGGGTATCTAGTTCAAGTGTTTATCAAG 362
consensus_10034#1      GTAAAGTCCTTATGATTAATTATTTTATTTTTCTTGCACCAAATTTAA---CTTTTCTAG 421
                        *** *    **  * * ** **    *   **    * * * ** **    ** **  *

consensus_10034#0      AACAATTGCCATCTGTTACATCAAACCATCCAATAGCTGTTACGTCTAATAAATCTCCGT 1007
consensus_10034#2      AACAATTGCCATCTGTTACATCAAACCATCCAATAGCTGTTACGTCTAATAAATCTCCGT 422
consensus_10034#1      TGTTTCTTTATATTCTTACCGTATTCCACACGGTTCTTGTTCATCATACTACATTCTTGC 481
                             *      * ****   *  ***  *  *   ****     ** ** **    * 

consensus_10034#0      GTAAGCCAAAAAAATATAACAATAATCAGAATGTGTCTAATCCTCATCAAACTA-ATAGT 1066
consensus_10034#2      GTAAGCCAAAAAAATATAACAATAATCAGAATGTGTCTAATCCTCATCAAACTA-ATAGT 481
consensus_10034#1      -CAAAACAAATGTCCATAA-ACCAATGGTACTACCATTTGTTTTCGCCAGAATACATTGT 539
                         **  ****     **** *  ***   * *     *  *  **  ** * ** ** **

consensus_10034#0      GTATTACGAAAATCACACAATCATGAATTTGAATCTTCCTTTGCCAAAGATTCAAACTGC 1126
consensus_10034#2      GTATTACGAAAATCACACAATCATGAATTT------------------------------ 511
consensus_10034#1      TGTTGATAGAAAGCTTTTAAGAAAAAATACGCTTTGTTTTATATGTAATCAAACTGGACA 599
                          * *   *** *    **  *  ***                                

consensus_10034#0      AATAATCCTGGAATCATTAATGATCATACTTCTAAAAGTGCTTTGCCATCCTCAGGGAAT 1186
consensus_10034#2      ------------------------------------------------------------
consensus_10034#1      TGTTGCATTTGAATGTCCAAGCAA------------------------------------ 623
                                                                                   

consensus_10034#0      CAGACAAATAGTTGCAGTACAACATCATATCGACAAAAACAATCCAATTCTCCAGTGAAA 1246
consensus_10034#2      ------------------------------------------------------------
consensus_10034#1      ------------------------------------------------------------
                                                                                   

consensus_10034#0      GTTAAATCAAATTTTCAACAATCCCCACAAAAGGCGAAATGCTCAGTATCTAATGGATGT 1306
consensus_10034#2      ------------------------------------------------------------
consensus_10034#1      ------------------------------------------------------------
                                                                                   

consensus_10034#0      GTTATAG 1313
consensus_10034#2      -------
consensus_10034#1      -------
                              




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)