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Schistosoma mansoni
cluster # 10047 cluster # 10047       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10047#0 length = 1791 sequences # 12  
consensus_10047#1 length = 589 sequences # 1  

consensusID : consensus_10047#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1791
fasta sequence
                              [TTGAACTTTTTTATTGGAATTCAAACATAAAAAAGTACATAAGCGCATGAGGGTATGTGCTACCGATTGCAAGGAGATCCACAACTGTTCTTATATTACTAACATTGTGAGCAGGGGATAAAAAATTAATAAGGCGCTGTACAACTCTTTACAGGAAACAAAATAACAAGCGTAAGGAAATCACTGTCATTTAAAAGATTGGTACAAAGTCTGATTGAAGGTAATGAAATGGAGAGAAAATGTGTATTTCGATAGTAATTTAAATATCATCACGAGTGCTTCCGCGCAGTCCACCGATCAGTTTGGTTGATGCTAATGACGTACAGCAGCCTCTAAGTTCAATCTGTGGGTGCTGTTTACTTTATCTAATTGTGAGTTAGAGGTAGGATTATCGTCGACAGATGCATCAGCGATTTCTGGCATTGTAGAGCGTATGATAGAAAATGGCATCGCAGGAGAATATGTAGACGGTTCAATGTTCCCTGAATGGTTCGTTTTATTAATCTGGAGAGCGAATTCAACTGGACCATCGCATACCACACATGACAGAGTTGATTTGGATCCCCAAAATATATGCAGAACTTCATCAAGAGTAACTCCCATTAACCAATGTCCATTGATCTCCAATAATCTATCACCCGGCTTCAATCTGCCGTCTCGAGCAATGACACCATCTGGTGAAACCCATGTAACAAATATTCCGTCATCATTGGCTAGTGATGAGTAATGTGATCCTAAATTAGTTATCATGTTACTATCACTAGTGTTAAGTCCACCTGTAACACGTAATCCATATCGTTCTCCAGGTCGTTTGGTCACAGTGATACGCCTTAGCCCTGGTGGAGGAGGATCTCTGCGTACATCTAACTGTAGTTCTTTAACAGGCTGGATTAAAGCTTGTACCGCTTCATCATGTGTAGCGTGTCTCAAGTCGACTCCATTAACTTTAAGCACTCTATCTCCGATACGTAAGCCAGTATTAAGAGCTGCGCCATCTAGGGAGATCTTAGATATAAAAATACCTGGTTCTTTGTTACCAAACGGAAGACAACTTATATCGGATCCTCCACAGATAGCTAAACCTAAAGGTCCACCATCATTGCGAACTGTAATTCTTTCCACAGGAATACCCTTTTCGCTATATAAGTAAACCCGAGAATCACATTTCTCAGAAATATGACTGTCTGTATCCGTCAAATCTGTAGCCTTTGTAGTATCTTGTGGATTATTCGATCTTTTAACTGTCAGAATTGATGATGTTATAAAACCATTAGCTGCTGATGTTTTCGGAAGACTACCGAGATTATCGTTTATGTCAGGATTATAACGAAGTAATTCCAAGTCTACTGAATCGTTAGAACTTGTTAACAACGAAATGGCTTCATCGTGACGAGCGTTTCTGATATCAACACCGTTTATGCTAATAATTTGATCACCGACTCGAAGTTGGCCTTGTTTATGAGCGGCTCCACCTTCTGTTATTTTACTAACATAGATAGCTTCATTATCTAATGGTGGAGGAAGTGAGCCTTGACCACCGGCAATACTAAATCCTAGACCATTTAAATCTCGCTGTAATGTACAGTGAATAAATTCTGGTATTTCTTTGGTGTTAATACTTCCCGTAACTAAACTGGGTAAAATCGTTTCCAAATTTATGTCCAATAATTTTTTGTGTACAATGCATTCATGATCAGGAACTGGTAACCTATACATATCTCTTACATCCAAAGGTTATGTCATATAAAAAAATTAATACAAAATATACTACGGCACATCGTTTAGTTGACA]

[+] EMBL CD075995             [TTGAACTTTTTTATTGGAATTCAAACATAAAAAAGTACATAAGCGCATGAGGGTATGTGCTACCGATTGCAAGGAGATCCACAACTGTTCTTATATTACTAACATTGTGAGCAGGGGATAAAAAATTAATAAGGCGCTGTACAACTCTTTACAGGAAACAAAATAACAAGCGTAAGGAAATCACTGTCATTTAAAAGATTGGTACAAAGTCTGATTGAAGGTAATGAAATGGAGAGAAAATGTGTATTTCGATAGTAATTTAAATATCATCACGAGTGCTTCCGCGCAGTCCACCGATCAGTTTGGTTGATGCTAATGACGTACAGCAGCCTCTAAGTTCAATCTGTGGGTGCTGTTTACTTTATCTAATTGTGAGTTAGAGGTAGGATTATCGTCGACAGATGCATCAGCGATTTCTGGCATTGTAGAGCGTATGATAGAAAATGGCATCGCAGGAGAATATGTAGACGGTTCAATGTTCCCTGAATGGTTCGTTTTATTAATCTGGAGAGCGAATTCAACTGGACCATCGCATACCACACATGACAGAGTTGATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AI977137             [                     CAAACATAAAAAAGTACATAAGCGCATGAGGGTATGTGCTACCGATTGCAAGGAGATCCACAACTGTTCTTATATTACTAACATTGTGAGCAGGGGATAAAAAATTAATAAGGCGCTGTACAACTCTTTACAGGAAACAAAATAACAAGCGTAAGGAAATCACTGTCATTTAAAAGATTGGTACAAAGTCTGATTGAAGGTAATGAAATGGAGAGAAAATGTGTATTTCGATAGTAATTTAAATATCATCACGAGTGCTTCCGCGCAGTCCACCGATCAGTTTGGTTGATGCTAATGACGTACAGCAGCCTCTAAGTTCAATCTGTGGGTGCTGTTTACTNTATCTAATTGTGAGTTAGAGGTAGGATTATCGTCGACAGATGCATCAGCGATTTCTGGCATTGTAGAGCGTATGATAGAAAATGGCATCGCANGAGAATATGTAGACGGTTCAATGTTCCCTGAATGGTTCGTTNTATTAATCTGGAGAGCGAATTCAACTGGACCATCGCATACCACACATGACAGAGTTGATTTGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD169711             [                                                           CTACCGATTGCAAGGAGATCCACAACTGTTCTTATATTACTAACATTGTGAGCAGGGGATAAAAAATTAATAAGGCGCTGTACAACTCTTTACAGGAAACAAAATAACAAGCGTAAGGAAATCACTGTCATTTAAAAGATTGGTACAAAGTCTGATTGAAGGTAATGAAATGGAGAGAAAATGTGTATTTCGATAGTAATTTAAATATCATCACGAGTGCTTCCGCGCAGTCCACCGATCAGTTTGGTTGATGCTAATGACGTACAGCAGCCTCTAAGTTCAACCTGTGGGTGCTGTTTACTTTATCTAATTGTGAGTTAGAGGTAGGATTATCGTCGACAGATGCATCAGCGATTTCTGGCATTGTAGAGCGTATGATAGAAAATGGCATCGCAGGAGAATATGTAGACGGTTCAATGTTCCCTGAATGGTTCGTTTTATTAATCTGGAGAGCGAATTCAACTGGACCATCGCATACCACACATGACANAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD095851             [                                                                                                                               AATAAGGCGCTGTACAACTCTTTACAGGAAACAAAATAACAAGCGTAAGGAAATCACTGTCATTTAAAAGATTGGTACAAAGTCTGATTGAAGGTAATGAAATGGAGAGAAAATGTGTATTTCGATAGTAATTTAAATATCATCACGAGTGCTTCCGCGCAGTCCACCGATCAGTTTGGTTGATGCTAATGACGTACAGCAGCCTCTAAGTTCAATCTGTGGGTGCTGTTTACTTTATCTAATTGTGAGTTAGAGGTAGGATTATCGTCGACAGATGCATCAGCGATTTCTGGCATTGTAGAGCGTATGATAGAAAATGGCATCGCAGGAGAATATGTAGACGGTTCAATGTTCCCTGAATGGTTCGTTTTATTAATCTGGAGAGCGTATTCAACTGGACCATCGCATACCACACATGACAGAGTTGATTTGGATCCCCAAAATATATGCAGAACTTCATCAAGAGTAACTCCCATTAACCAATGTCCATTGATCTCCAATAATCTATCACCCGGCTTCAATCTGCCGTCTCGAGCAATGACACCATCTGGTGAAA CCATGTAAC AATATTCCGTCA CATT GCTAGTGATGAGTAATGGGATCCTAAA TAGTTATCATGNTACTATCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD082395             [                                                                                                                                                                                                                               ATGAAATGGAGAGAAAATGTGTATTTCGATAGTAATTTAAATATCATCACGAGTGCTTCCGCGCAGTCCACCGATCAGTTTGGTTGATGCTAATGACGTACAGCAGCCTCTAAGTTCAATCTGTGGGTGCTGTTTACTTTATCTAATTGTGAGTTAGAGGTAGGATTATCGTCGACAGATGCATCAGCGATTTCTGGCATTGTAGAGCGTATGATAGAAAATGGCATCGCAGGAGAATATGTAGACGGTTCAATGTTCCCTGAATGGTTCGTTTTATTAATCTGGAGAGCGAATTCAACTGGACCATCGCATACCACACATGACAGAGTTGATTTGGATCCCCAAAATATATGCAGAACTTCATCAAGAGTAACTCCCATTAACCAATGTCCATTGATCTCCAATAATCTATCACCCGGCTTCAATCTGCCGTCTCGAGCAATGACACCATCTGGTGAAACCCATGTAACAAATATTCCGTCATCATTGGCTAGTGATGAGTAATGTGATCCTAAATTAGTTATCATGTTACTATCACTAGTGTTAAGTCCACCTGTGACACGTAATCCATATCGAACTCCAGGTCGTTTGGTCACAGTGATACGCt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD095736             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTTCAATGTTCCCTGAATGGTTCGTTTTATTAATCTGGAGAGCGAATTCAACTGGACCATCGCATACCACACATGACAGAGTTGATTTGGATCCCCAAAATATATGCAGAACTTCATCAAGAGTAACTCCCATTAACCAATGTCCATTGATCTCCAATAATCTATCACCCGGCTTCAATCTGCCGTCTCGAGCAATGACACCATCTGGTGAAACCCATGTAACAAATATTCCGTCATCATTGGCTAGTGATGAGTAATGTGATCCTAAATTAGTTATCATGTTACTATCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BG930791             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATCGCATACCACACATGACAGAGTTGATTTGGATCCCCAAAATATATGCAGAACTTCATCAAGAGTAACTCCCATTAACCAATGTCCATTGATCTCCAATAATCTATCACCCGGCTTCAATCTGCCGTCTCGAGCAATGACACCATCTGGTGAAACCCATGTAACAAATATTCCGTCATCATTGGCTAGTGATGAGTAATGTGATCCTAAATTAGTTATCATGTTACTATCACTAGTGTTAAGTCCACCTGTAACACGTAATCCATATCGTTCTCCAGGTCGTTTGGTCACAGTGATACGCCTTAGCCCTGGTGGAGGAGGATCTCTGCGTACATCTAACTGTAGTTCTTTAACAGGCTGGATTAAAGCTTGTACCGCTTCATCATGTGTAGCGTGTCTCAAGTCGACTCCATTAACTTTAAGCACTCTATCTCCGATACGTAAGCCAGTATTAAGAGCTGCGCCATCTAGGGAGATCTTAGATATAAAAATACCTGGTTCTTTGTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD146360             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCGGCTTCAATCTGCCGTCTCGAGCAATGACACCATCTGGTGAAACCCATGTAACAAATATTCCGTCATCATTGGCTAGTGATGGGTAATGTGATCCTAAATTAGTTATCATGTTACTATCACTAGTGTTAAGTCCACCTGTAACACGTAATCCATATCGTTCTCCAGGTCGTTTGGTCACAGTGATACGCCTTAGCCCTGGTGGAGGAGGATCTCTGCGTACATCTAACTGTAGTTCTTTAACAGGCTGGATTAAAGCTTGTACCGCTTCATCATGTGTAGCGTGTCTCAAGTCGACTCCATTAACTTTAAGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD171572             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTTGTACCGCTTCATCATGTGTAGCGTGTCTCAAGTCGACTCCATTAACTTTAAGCACTCTATCTCCGATACGTAAGCCAGTATTAAGAGCTGCGCCATCTAGGGAGATCTTAGATATAAAAATACCTGGTTCTTTGTTACCAAACGGAAGACAACTTATATCGGATCCTCCACAGATAGCTAAACCTAAAGGTCCACCATCATTGCGAACTGTAATTCTTTCCACAGGAATACCCTTTTCGCTATATAAGTAAACCCGAGAATCACATTTCTCAGAAATATGACTGTCTGTATCCGTCAAATCTGTAGCCTTTGTAGTATCTTGTGGATTATTCGATCTTTTAACTGTCAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD063513             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAGTATTAAGAGCTGCGCCATCTAGGGAGATCTTAGATATAAAAATACCTGGTTCTTTGTTACCAAACGGAAGACAACTTATATCGGATCCTCCACAGATAGCTAAACCTAAAGGTCCACCATCATTGCGAACTGTAATTCTTTCCACAGGAATACCCTTTTCGCTATATAAGTAAACCCGAGAATCACATTTCTCAGAAATATGACTGTCTGTATCCGTCAAATCTGTAGCCTTTGTAGTATCTTGTGGATTATTCGATCTTTTAACTGTCAGAATTGATGATGTTATAAAACCATTAGCTGCTGATGTTTTCGGAAGACTACCGAGATTATCGTTTATGTCAGGATTATAACGAAGTAATTCCAAGTCTACTGAATCGTTAGAACTTGTTAACAACGAAATGGCTTCATCGTGACGAGCGTTTCTGATATCAACACCGTTTATGCTAATAATTT                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD098256             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTAATTCTTTCCACAGGAATACCCTTTTCGCTATATAAGTAAACCCGAGAATCACATTTCTCAGAAATATGACTGTCTGTATCCGTCAAATCTGTAGCCTTTGTAGTATCTTGTGGATTATTCGATCTTTTAACTGTCAGAATTGATGATGTTATAAAACCATTAGCTGCTGATGTTTTCGGAAGACTACCGAGATTATCGTTTATGTCAGGATTATAACGAAGTAATTCCAAGTCTACTGAATCGTTAGAACTTGTTAACAACGAAATGG                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD092041             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCTCAGAAATATGACTGTCTGTATCCGTCAAATCTGTAGCCTTTGTAGTATCTTGTGGATTATTCGATCTTTTAACTGTCAGAATTGATGATGTTATAAAACCATTAGCTGCTGATGTTTTCGGAAGACTACCGAGATTATCGTTTATGTCAGGATTATAACGAAGTAATTCCAAGTCTACTGAATCGTTAGAACTTGTTAACAACGAAATGGCTTCATCGTGACGAGCGTTTCTGATATCAACACCGTTTATGCTAATAATTTGATCACCGACTCGAAGTTGGCCTTGTTTATGAGCGGCTCCACCTTCTGTTATTTTACTAACATAGATAGCTTCATTATCTAATGGTGGAGGAAGTGAGCCTTGACCACCGGCAATACTAAATCCTAGACCATTTAAATCTCGCTGTAATGTACAGTGAATAAATTCTGGTATTTCTTTGGTGTTAATACTTCCCGTAACTAAACTGGGTAAAATCGTTTCCAAATTTATGTCCAATAATTTTTTGTGTACAATGCATTCATGATCAGGAACTGGTAACCTATACATATCTCTTACATCCAAAGGTTATGTCATATAAAAAAATTAATACAAAATATACTACGGCACATCGTTTAGTTGACA]


>consensus_10047#0 TTGAACTTTTTTATTGGAATTCAAACATAAAAAAGTACATAAGCGCATGAGGGTATGTGC TACCGATTGCAAGGAGATCCACAACTGTTCTTATATTACTAACATTGTGAGCAGGGGATA AAAAATTAATAAGGCGCTGTACAACTCTTTACAGGAAACAAAATAACAAGCGTAAGGAAA TCACTGTCATTTAAAAGATTGGTACAAAGTCTGATTGAAGGTAATGAAATGGAGAGAAAA TGTGTATTTCGATAGTAATTTAAATATCATCACGAGTGCTTCCGCGCAGTCCACCGATCA GTTTGGTTGATGCTAATGACGTACAGCAGCCTCTAAGTTCAATCTGTGGGTGCTGTTTAC TTTATCTAATTGTGAGTTAGAGGTAGGATTATCGTCGACAGATGCATCAGCGATTTCTGG CATTGTAGAGCGTATGATAGAAAATGGCATCGCAGGAGAATATGTAGACGGTTCAATGTT CCCTGAATGGTTCGTTTTATTAATCTGGAGAGCGAATTCAACTGGACCATCGCATACCAC ACATGACAGAGTTGATTTGGATCCCCAAAATATATGCAGAACTTCATCAAGAGTAACTCC CATTAACCAATGTCCATTGATCTCCAATAATCTATCACCCGGCTTCAATCTGCCGTCTCG AGCAATGACACCATCTGGTGAAACCCATGTAACAAATATTCCGTCATCATTGGCTAGTGA TGAGTAATGTGATCCTAAATTAGTTATCATGTTACTATCACTAGTGTTAAGTCCACCTGT AACACGTAATCCATATCGTTCTCCAGGTCGTTTGGTCACAGTGATACGCCTTAGCCCTGG TGGAGGAGGATCTCTGCGTACATCTAACTGTAGTTCTTTAACAGGCTGGATTAAAGCTTG TACCGCTTCATCATGTGTAGCGTGTCTCAAGTCGACTCCATTAACTTTAAGCACTCTATC TCCGATACGTAAGCCAGTATTAAGAGCTGCGCCATCTAGGGAGATCTTAGATATAAAAAT ACCTGGTTCTTTGTTACCAAACGGAAGACAACTTATATCGGATCCTCCACAGATAGCTAA ACCTAAAGGTCCACCATCATTGCGAACTGTAATTCTTTCCACAGGAATACCCTTTTCGCT ATATAAGTAAACCCGAGAATCACATTTCTCAGAAATATGACTGTCTGTATCCGTCAAATC TGTAGCCTTTGTAGTATCTTGTGGATTATTCGATCTTTTAACTGTCAGAATTGATGATGT TATAAAACCATTAGCTGCTGATGTTTTCGGAAGACTACCGAGATTATCGTTTATGTCAGG ATTATAACGAAGTAATTCCAAGTCTACTGAATCGTTAGAACTTGTTAACAACGAAATGGC TTCATCGTGACGAGCGTTTCTGATATCAACACCGTTTATGCTAATAATTTGATCACCGAC TCGAAGTTGGCCTTGTTTATGAGCGGCTCCACCTTCTGTTATTTTACTAACATAGATAGC TTCATTATCTAATGGTGGAGGAAGTGAGCCTTGACCACCGGCAATACTAAATCCTAGACC ATTTAAATCTCGCTGTAATGTACAGTGAATAAATTCTGGTATTTCTTTGGTGTTAATACT TCCCGTAACTAAACTGGGTAAAATCGTTTCCAAATTTATGTCCAATAATTTTTTGTGTAC AATGCATTCATGATCAGGAACTGGTAACCTATACATATCTCTTACATCCAAAGGTTATGT CATATAAAAAAATTAATACAAAATATACTACGGCACATCGTTTAGTTGACA



consensusID : consensus_10047#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 589
fasta sequence
                              [AGACGGAACACAACTTAATCGGATCCTCCGCAGATAGTTAAACATAAAGGTCCACCATCATTGCGAGCTGTACTCTTTCCACAGGAATATCCTTTTCGCTATGTAAGTAACCCGAGAATCACATTTCTCAGAAATATGTCTGTCTGTATCCGTCAAATCTGTAGCCTTTGTAGTATCTTGTGGATTATTCGATCTGTTACCTGTCAGAATTGATGATGTTATAAAACCATTAGGTGCTGATGTTTTCGGAAGACTACCGAGATTATCGTTTATGTCAGGATTATAACGAAGTAATTTCAAGTCTACTGAATCGTTAGCACTGTGTTAACAACGAAATGGCTTCATCGTGACGAGCGTTTCATGATATCTAACACCGTGTTATGCTATATAATTCTGATCACCAGACTCGTAAGTATGGGCCTTGTTATATGAGCAGGCTCCTACCTTACTGTTATTTTATCTAACATAGTATAGCTTTCATTATAGTATATGGTGGAGGAATGTGAGCCTTGTCCACCGGCAATACTAAATCCTAGACCATTTAAGTCTCGGTGTGATGTTCAGTGAATAAATCTGGTTTTATTTGGTG]

[-] EMBL CD133143             [AGACGGAACACAACTTAATCGGATCCTCCGCAGATAGTTAAACATAAAGGTCCACCATCATTGCGAGCTGTACTCTTTCCACAGGAATATCCTTTTCGCTATGTAAGTAACCCGAGAATCACATTTCTCAGAAATATGTCTGTCTGTATCCGTCAAATCTGTAGCCTTTGTAGTATCTTGTGGATTATTCGATCTGTTACCTGTCAGAATTGATGATGTTATAAAACCATTAGGTGCTGATGTTTTCGGAAGACTACCGAGATTATCGTTTATGTCAGGATTATAACGAAGTAATTTCAAGTCTACTGAATCGTTAGCACTGTGTTAACAACGAAATGGCTTCATCGTGACGAGCGTTTCATGATATCTAACACCGTGTTATGCTATATAATTCTGATCACCAGACTCGTAAGTATGGGCCTTGTTATATGAGCAGGCTCCTACCTTACTGTTATTTTATCTAACATAGTATAGCTTTCATTATAGTATATGGTGGAGGAATGTGAGCCTTGTCCACCGGCAATACTAAATCCTAGACCATTTAAGTCTCGGTGTGATGTTCAGTGAATAAATCTGGTTTTATTTGGTG]


>consensus_10047#1 AGACGGAACACAACTTAATCGGATCCTCCGCAGATAGTTAAACATAAAGGTCCACCATCA TTGCGAGCTGTACTCTTTCCACAGGAATATCCTTTTCGCTATGTAAGTAACCCGAGAATC ACATTTCTCAGAAATATGTCTGTCTGTATCCGTCAAATCTGTAGCCTTTGTAGTATCTTG TGGATTATTCGATCTGTTACCTGTCAGAATTGATGATGTTATAAAACCATTAGGTGCTGA TGTTTTCGGAAGACTACCGAGATTATCGTTTATGTCAGGATTATAACGAAGTAATTTCAA GTCTACTGAATCGTTAGCACTGTGTTAACAACGAAATGGCTTCATCGTGACGAGCGTTTC ATGATATCTAACACCGTGTTATGCTATATAATTCTGATCACCAGACTCGTAAGTATGGGC CTTGTTATATGAGCAGGCTCCTACCTTACTGTTATTTTATCTAACATAGTATAGCTTTCA TTATAGTATATGGTGGAGGAATGTGAGCCTTGTCCACCGGCAATACTAAATCCTAGACCA TTTAAGTCTCGGTGTGATGTTCAGTGAATAAATCTGGTTTTATTTGGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10047#0      TTGAACTTTTTTATTGGAATTCAAACATAAAAAAGTACATAAGCGCATGAGGGTATGTGC 60
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      TACCGATTGCAAGGAGATCCACAACTGTTCTTATATTACTAACATTGTGAGCAGGGGATA 120
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      AAAAATTAATAAGGCGCTGTACAACTCTTTACAGGAAACAAAATAACAAGCGTAAGGAAA 180
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      TCACTGTCATTTAAAAGATTGGTACAAAGTCTGATTGAAGGTAATGAAATGGAGAGAAAA 240
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      TGTGTATTTCGATAGTAATTTAAATATCATCACGAGTGCTTCCGCGCAGTCCACCGATCA 300
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      GTTTGGTTGATGCTAATGACGTACAGCAGCCTCTAAGTTCAATCTGTGGGTGCTGTTTAC 360
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      TTTATCTAATTGTGAGTTAGAGGTAGGATTATCGTCGACAGATGCATCAGCGATTTCTGG 420
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      CATTGTAGAGCGTATGATAGAAAATGGCATCGCAGGAGAATATGTAGACGGTTCAATGTT 480
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      CCCTGAATGGTTCGTTTTATTAATCTGGAGAGCGAATTCAACTGGACCATCGCATACCAC 540
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      ACATGACAGAGTTGATTTGGATCCCCAAAATATATGCAGAACTTCATCAAGAGTAACTCC 600
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      CATTAACCAATGTCCATTGATCTCCAATAATCTATCACCCGGCTTCAATCTGCCGTCTCG 660
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      AGCAATGACACCATCTGGTGAAACCCATGTAACAAATATTCCGTCATCATTGGCTAGTGA 720
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      TGAGTAATGTGATCCTAAATTAGTTATCATGTTACTATCACTAGTGTTAAGTCCACCTGT 780
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      AACACGTAATCCATATCGTTCTCCAGGTCGTTTGGTCACAGTGATACGCCTTAGCCCTGG 840
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      TGGAGGAGGATCTCTGCGTACATCTAACTGTAGTTCTTTAACAGGCTGGATTAAAGCTTG 900
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      TACCGCTTCATCATGTGTAGCGTGTCTCAAGTCGACTCCATTAACTTTAAGCACTCTATC 960
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      TCCGATACGTAAGCCAGTATTAAGAGCTGCGCCATCTAGGGAGATCTTAGATATAAAAAT 1020
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      ACCTGGTTCTTTGTTACCAAACGGAAGACAACTTATATCGGATCCTCCACAGATAGCTAA 1080
consensus_10047#1      ------------------AGACGGAACACAACTTA-ATCGGATCCTCCGCAGATAGTTAA 41
                                         * ****** ******** ************ ******* ***

consensus_10047#0      ACCTAAAGGTCCACCATCATTGCGAACTGTAATTCTTTCCACAGGAATACCCTTTTCGCT 1140
consensus_10047#1      ACATAAAGGTCCACCATCATTGCGAGCTGTA-CTCTTTCCACAGGAATATCCTTTTCGCT 100
                       ** ********************** *****  **************** **********

consensus_10047#0      ATATAAGTAAACCCGAGAATCACATTTCTCAGAAATATGACTGTCTGTATCCGTCAAATC 1200
consensus_10047#1      ATGTAAGTAA-CCCGAGAATCACATTTCTCAGAAATATGTCTGTCTGTATCCGTCAAATC 159
                       ** ******* **************************** ********************

consensus_10047#0      TGTAGCCTTTGTAGTATCTTGTGGATTATTCGATCTTTTAACTGTCAGAATTGATGATGT 1260
consensus_10047#1      TGTAGCCTTTGTAGTATCTTGTGGATTATTCGATCTGTTACCTGTCAGAATTGATGATGT 219
                       ************************************ *** *******************

consensus_10047#0      TATAAAACCATTAGCTGCTGATGTTTTCGGAAGACTACCGAGATTATCGTTTATGTCAGG 1320
consensus_10047#1      TATAAAACCATTAGGTGCTGATGTTTTCGGAAGACTACCGAGATTATCGTTTATGTCAGG 279
                       ************** *********************************************

consensus_10047#0      ATTATAACGAAGTAATTCCAAGTCTACTGAATCGTTAGAACT-TGTTAACAACGAAATGG 1379
consensus_10047#1      ATTATAACGAAGTAATTTCAAGTCTACTGAATCGTTAGCACTGTGTTAACAACGAAATGG 339
                       ***************** ******************** *** *****************

consensus_10047#0      CTTCATCGTGACGAGCGTTTC-TGATATC-AACACCGT-TTATGCTA-ATAATT-TGATC 1434
consensus_10047#1      CTTCATCGTGACGAGCGTTTCATGATATCTAACACCGTGTTATGCTATATAATTCTGATC 399
                       ********************* ******* ******** ******** ****** *****

consensus_10047#0      ACC-GACTCGAAGTT---GGCCTTGTT-TATGAGC-GGCTCC-ACCTT-CTGTTATTTTA 1486
consensus_10047#1      ACCAGACTCGTAAGTATGGGCCTTGTTATATGAGCAGGCTCCTACCTTACTGTTATTTTA 459
                       *** ****** *  *   ********* ******* ****** ***** ***********

consensus_10047#0      -CTAACATAG-ATAGCTT-CATTAT--CTAATGGTGGAGGAA-GTGAGCCTTGACCACCG 1540
consensus_10047#1      TCTAACATAGTATAGCTTTCATTATAGTATATGGTGGAGGAATGTGAGCCTTGTCCACCG 519
                        ********* ******* ******     ************ ********** ******

consensus_10047#0      GCAATACTAAATCCTAGACCATTTAAATCTCGCTGTAATGTACAGTGAATAAATTCTGGT 1600
consensus_10047#1      GCAATACTAAATCCTAGACCATTTAAGTCTCGGTGTGATGTTCAGTGAATAAAT-CTGGT 578
                       ************************** ***** *** **** ************ *****

consensus_10047#0      ATTTCTTTGGTGTTAATACTTCCCGTAACTAAACTGGGTAAAATCGTTTCCAAATTTATG 1660
consensus_10047#1      -TTTATTTGGTG------------------------------------------------ 589
                        *** *******                                                

consensus_10047#0      TCCAATAATTTTTTGTGTACAATGCATTCATGATCAGGAACTGGTAACCTATACATATCT 1720
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      CTTACATCCAAAGGTTATGTCATATAAAAAAATTAATACAAAATATACTACGGCACATCG 1780
consensus_10047#1      ------------------------------------------------------------
                                                                                   

consensus_10047#0      TTTAGTTGACA 1791
consensus_10047#1      -----------
                                  




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)