These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10049#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 716 fasta sequence [TCACCCAATTTTCGGTGAAGGATTAATTATCAGATTTTGGTTATAAATTCATGGAAGGTGGTCAACCTGTTGCTGAAGTTCGTTCATACTCACCTAATAAATGTGGCGAAGTAGCTAACGGCAGTATGCACTCAAGTTCAACGTCGGACTCAGACTATGAATACCGCAAGAGGAATAGCTATTGTCTTAGTTGTCAAAGACGACCTAAAGCATCATTGA-AATTTATATTGACTATATGGTACTCTCCAGAGACTAGCTCGGCTATAGCCGAAGCAATGTCATCTACCTATACGGAG-GTACAATTACAAGAAATAGTCTCCAGTTCAACCAAAGATATCTTACAGTTAGCTGAGAAACATTTTGCTGACCTCAGAATATAATAATATCCTGGGTC-AGTTGTTTTATTCCTCTTTTTCCCTCTT-CACATTTCCTTTTCGTCTTCTTC-ATTCTCTTCCTTCATACTAGATTTTTTTAATCACTTCCAATCAGTTCATTATAACACTGTATATTTTGTTAATTATACACTTTGTGTGCTTCTGTGAAGATAAATTTATATAGAAGTGGTGTTTGTTTAATGTGTACATAGACTCTTTCCATCAATATTATTGATTGAGATAATAATGATTCGAACTGCTTCTCCTATTCTTATATTTTCAACACACGTACAATTTCTATCTCTTGTTCAATATGTGTAGTAATAAGAGAATGACAGTGTT] [+] EMBL AI975207 [TCACCCAATTTTCGGTGAAGGATTAATTATCAGATTTTGGTTATAAATTCATGGAAGGTGGTCAACCTGTTGCTGAAGTTCGTTCATACTCACCTAATAAATGTGGCGAAGTAGCTAACGGCAGTATGCACTCAAGTTCAACGTCGGACTCAGACTATGAATACCGCAAGAGGAATAGCTATTGTCTTAGTTGTCAAAGACGACCTAAAGCATCATTGA AATTTATATTGACTATATGGTACTCTCCAGAGACTAGCTCGGCTATAGCCGAAGCAATGTCATCTACCTATACGGAG GTACAATTACAAGAAATAGTCTCCAGTTCAACCAAAGATATCTTACAGTTAGCTGAGAAACATTTTGCTGACCTCAGAATATAATAATATACTGGGTCGAG TGTTTTA ] [+] EMBL AI975426 [ CACCCAATTTTCGGTGAAGGATTAATTATCAGATTTTGGTTATAAATTCATGGAAGGTGGTCAACCTGTTGCTGAAGTTCGTTCATACTCACCTAATAAATGTGGCGAAGTAGCTAACGGCAGTATGCACTCAAGTTCAACGTCGGACTCAGACTATGAATACCGCAAGAGGAATAGCTATTGTCTTAGTTGTCAAAGACGACCTAAAGCATCATTGA AATTTATATTGACTATATGGTACTCTCCAGAGACTAGCTCGGCTATAGCCGAAGCAATGTCATCTACCTATACGGAG GTACAATTACAAGAAATAGTCTCCAGTTCAACCAAAGATATCTTACAGTTAGCTGAGAAACATTTTGCTGACCTCAGAATATAATAATATCCTGGGTC AGTTGTTTTATTCCTCTTTTTCCCTCTT CACATTTCCTTTTCGTCTTCTTC ATTCTCTTCCTTCATACTAGATTTTTTTAATCACTTCCAATCAGTTCATTATAACACTGTATATTTTGCTAATTATACACTTTGTGTGCTTCTGTGAAG ] [+] EMBL BF936047 [ CACCCAATTTTCGGTGAAGGATTAATTATCAGATTTTGGTTATAAATTCATGGAAGGTGGTCAACCTGTTGCTGAAGTTCGTTCATACTCACCTAATAAATGTGGCGAAGTAGCTAACGGCAGTATGCACTCAAGTTCAACGTCGGACTCAGACTATGAATACCGCAAGAGGAATAGCTATTGTCTTAGTTGTCAAAGACGACCTAAAGCATCATTGA AATTTATATTGACTATATGGTACTCTCCAGAGACTAGCTCGGCTATAGCCGAAGCAATGTCATCTACCTATACGGAG GTACAATTACAAGAAATAGTCTCCAGTTCAACCAAAGATATCTTACAGTTAGCTGAGAAACATTTTGCTGACCTCAGAATATAATAATATCCTGGGTC AGTTGTTTTATTCCTCTTTTTCCCTCTT CACATTTCCTTTTCGTCTTCTTC ATTCTCTTCCTTCATACTAGATTTTTTTAATCACTTCCAATCAGTTCATTATAACACTGTATATTTTGTTAATTATACA ] [+] EMBL AW017091 [ CACCCAATTTTCGGTGAAGGATTAATTATCAGATTTTGGTTATAAATTCATGGAAGGTGGTCAACCTGTTGCTGAAGTTCGTTCATACTCACCTAATAAATGTGGCGAAGTAGCTAACGGCAGTATGCACTCAAGTTCAACGTCGGACTCAGACTATGAATACCGCAAGAGGAATAGCTATTGTCTTAGTTGTCAAAGACGACCTAAAGCATCATTGA AATTTATATTGACTATATGGTACTCTCCAGAGACTAGCTCGGCTATAGCCGAAGCAATGTCATCTACCTATACGGAG GTACAATTACAAGAAATAGTCTCCAGTTCAACCAAAGATATCTTACAGTTAGCTGAGAAACATTT ] [-] EMBL CD178908 [ GTTGCTGAAGTTCGTTCATACTCACCTAATAAATGTGGCGAAGTAGCTAACGGCAGTATGCACTCAAGTTCAACGTCGGACTCAGACTATGAATACCGCAAGAGGAATAGCTATTGTCTTAGTTGTCAAAGACGACCTAAAGCATCATTGA AATTTATATTGACTATATGGTACTCTCCAGAGACTAGCTCGGCTATAGCCGAAGCAATGTCATCTACCTATACGGAG GTACAATTACAAGAAATAGTCTCCAGTTCAACCAAAGATATCTTACAGTTAGCTGAGAAACATTTTGCTGACCTCAGAATATAATAATATCCTGGGTC AGTTGTTTTATTCCTCTTTTTCCCTC ] [-] EMBL CD178789 [ GTTGCTGAAGTTCGTTCATACTCACCTAATAAATGTGGCGAAGTAGCTAACGGCAGTATGCACTCAAGTTCAACGTCGGACTCAGACTATGAATACCGCAAGAGGAATAGCTATTGTCTTAGTTGTCAAAGACGACCTAAAGCATCATTGA AATTTATATTGACTATATGGTACTCTCCAGAGACTAGCTCGGCTATAGCCGAAGCAATGTCATCTACCTATACGGAG GTACAATTACAAGAAATAGTCTCCAGTTCAACCAAAGATATCTTACAGTTAGCTGAGAAACATTTTGCTGACCTCAGAATATAATAACATCCTGGGTC AGTTGTTTTATTCCTCTTTTTCCCTCTT CACATTTCCTTTTCGTCTTCTT ] [-] EMBL CD178627 [ GTTGCTGAAGTTCGTTCATACTCACCTAATAAATGTGGCGAAGTAGCTAACGGCAGTATGCACTCAAGTTCAACGTCGGACTCAGACTATGAATACCGCAAGAGGAATAGCTATTGTCTTAGTTGTCAAAGACGACCTAAAGCATCATTGA AATTTATATTGACTATATGGTACTCTCCAGAGACTAGCTCGGCTATAGCCGAAGCAATGTCATCTACCTATACGGAG GTACAATTACAAGAAATAGTCTCCAGTTCAACCAAAGATATCTTACAGTTAGCTGAGAAACATTTTGCTGACCTCAGAATATAATAATATCCTGGGTC AGTTGTTTTATTCCTCTTTTTCCCTCTT CACATTTCCTTTTCGTCT ] [-] EMBL CD141312 [ GTCTTAGTTGTCAAAGTCGACCTAAAGCATCATTGAGAATTTATATTGACTATATGGTACTCTCCAGAGACTAGCTCGGCTATAGCCGAAGCAATGTCATCTACCTATACGGAGCGTACAATTACAAGAAATAGTCTCCAGTTCAACCAAAGATATCTTACAGTTAGCTGAGAAACATTTTGCTGACCTCAGAATATAATAATATCCTGGGTC AGTTGTTTTATTC ] [-] EMBL CD141299 [ GTCTTAGTTGTCAAAGACGACCTAAAGCATCATTGA AATTTATATTGACTATATGGTACTCTCCAGAGACTAGCTCGGCTATAGCCGAAGCAATGTCATCTACCTATACGGAG GTACAATTACAAGAAATAGTCTCCAGTTCAACCAAAGATATCTTACAGTTAGCTGAGAAACATTTTGCTGACCTCAGAATATAATAATATCCTGGGTC AGTTGTTTTATTC ] [-] EMBL CD197077 [ TGTCAAAGACGACCTAAAGCATCATTGA AATTTATATTGACTATATGGTACTCTCCAGAGACTAGCTCGGCTATAGCCGAAGCAATGTCATCTACCTATACGGAG GTACAATTACAAGAAATAGTCTCCAGTTCAACCAAAGATATCTTACAGTTAGCTGAGAAACATTTTGCTGACCTCAGAATATAATAATATCCTGGGTC AGTTGTTTTATTCCTCTTTTTCCCTCTT CACATTTCCTTTTCGTCTTCTTC ATTCTCTTCCTTCATACTAGATTTTTTTAATCACTTCCAATCAGTTCATTATAACACTGTATATTTTGTTAATTATACACTTTGTGTGCTTCTGTGAAGATAAATTTATATAGAAGTGGTGTTTGTTTAATGTGTACATAGACTCTTTCCATCAATATTATTGATTGAGATAATAATGATTCGAACTGCTTCTCCTATTCTTATATTTTCAACACACGTAC ] [-] EMBL CD196561 [ ACGGAG GTACAATTACAAGAAATAGTCTCCAGTTCAACCTAAGATATCTGACAGTTAGCTGAGAAACATTTTGCTGACCTCAGAATATAATAATATCCTGGGTC AGTTGTTTTATTCCTCTGGTTCCCTCTT CACATTTCCTGTTCGTCTTCTTC ATTCTCTTCCTTCATACTAGATTTTTTTAATCACTTCCAATCAGTTCATTATAACACTGTATATTTTGTTAATTATACACTTTGTGTGCTTCTGTGAAGATAAATTTATATAGAAGTGGTGTTTGTTTAATGTGTACATAGACTCTTTCCATCAATATTATTGATTGAGATAATAATGATTCGAACTGCTTCTCCTATTCTTATATTTTCAACACACGTAC ] [+] EMBL AA566168 [ AGTTCAACCAAAGATATCTTACAGTTAGCTGAGAAACATNTTNCTGACCTCAGAATATAATAATATCCTGGGTC AGTTGTTTTATTCCTCTTTTTCCCTCTTCCACATTTNCTTTTCGTCTTCTTC ATTCTCTTCCTTCATACTAGATTTTTTTAATCACTTCCAATCAGTTC ] [+] EMBL AA629478 [ ATCTTACAGTTAGCTGAGAAACATTTTGCTGACCTCAGAATATAATAATATCCTGGGTC AGTTGTTTTATTCCTCTTTTTCCCTCTT CACATTTCCTTTTCGTCTTCTTCNATCCTCTNCCTTCATACTAGATTTTTTTAATCACTTCCAATCAGTTCATTATAACACTGTATATTTTGTTAATTATACACTTTGTGTGCTTCTGTGAAGATAAATTTATATAGAAGTGGTGTTTGTTTAATGTGTACATAGAC CTTTCCATCAATATTATTGATTGAGATAATAATGATTCGAACTGCTTCTCCTATTCTTATATTTTCAACACACGTACAATTTCTATCTCTTGTTCAATATGTGTAGTAATAAGAGAATGACAGTGTT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||