| These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs : 
 consensusID : consensus_10072#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 976 fasta sequence 
                              [GGGGACAGACAGAAAATTGTATATAAGTTGGTTGTGTATGTGATAGTTACAGGACAAGTTAATTTAAAACGTTCATTGAATAAAATCTAAACAGGATATGCCATTTACCAATGGTCTTTTTTTATTACATATCAAACAACAAGGAAATAATTACGATAACAATAATGAGAATGAAATTTATTGATAGCTAACAAACACATGGGTGGCAACAATAATAATCACAATGGTGGGAGTACAGGAGTAGTGAGGGTTTCAACCTCTACTACTATTACTATTACTACTACTAGGAAAAGAGGCAAAGCAGTTGTCAACCAATCAGAAGACAAGACTGAATGGAACAGAACAACAAACAAAAAACAAGAACTTATGTTTGCTCAATGAAGTAACAAAAGAGAAAATTGGGTAATAGTGAACATGATGTATATTTATACATGTACACCTCTTGGTCAATTTGAAAAATGTCTATAATTGATAATAATTGACGGTGGACAGCAGTGTCGAGTGTTGGTTCAATGGATAAAAAGAATGAAAATAAGAAACAGGATACAAATATTAAACCACCAAAAAGGAAAAACAAAACAACCAATCCTCTAATATTACTCAGTGAATAAAAGAATGAACAAACTCAAAGTCTGAATTAAT-AAGTAATAATATTTAGAAATAACGTCTACACTGG-TG-TAACGATAATGATGATAATAATAAATAACGGCTGTTTGTAGGCGCGCACATAATCTTTAATAAATAAAACGGGTAGACAAT-AAGAAATCCGAGCCCTCTAAAACGAAACAAATATGGTTACATAAATATATTGGCATATTATATCTGTTACATTTGATAGTAGAATCTAGAGGTGTGTGGACCAGAGAAGAACAGAATAAGTTGACGGTAGAATTCAGAAGAATCTGTAGGACAAACCGTAGGAATGAATACAGAGAGAGAGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGA]
[-] EMBL CD117475             [GGGGACAGACAGAAAATTGTATATAAGTTGGTTGTGTATGTGATAGTTACAGGACAAGTTAATTTAAAACGTTCATTGAATAAAATCTAAACAGGATATGCCATTTACCAATGGTCTTTTTTTATTACATATCAAACAACAAGGAAATAATTACGATAACAATAATGAGAATGAAATTTATTGATAGCTAACAAACACATGGGTGGCAACAATAATAATCACAATGGTGGGAGTACAGGAGTAGTGAGGGTTTCAACCTCTACTACTATTACTATTACTACTACTAGGAAAAGAGGCAAAGCAGTTGTCAACCAATCAGAAGACAAGACTGAATGGAACAGAACAACAAACAAAAAACAAGAACTTATGTTTGCTCAATGAAGTAACAAAAGAGAAAATTGGGTAATAGTGAACATGATGTATATTTATACATGTACACCTCTTGGTCAATTTGAAAAATGTCTATAATTGATAATAATTGACGGTGGACAGCAGTGTCGAGTGTTGGTTCAATGGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD201974             [                                   GTATGTGATAGTTACAGGACAAGTTAATTTAAAACGTTCATTGAATAAAATCTAAACAGGATATGCCATTTACCAATGGTCTTTTTTTATTTCATATCAAACAACAAGGAAATAATTACGATAACAATAATGAGAATGAAATTTATTGATAGCTAACAAACACATGGGTGGCAACAATAATAATCACAATGGTGGGAGTACAGGAGTAGTGAGGGTTTCAACCTCTACTACTATTACTATTACTACTACTAGGAAAAGAGGCAAAGCAGTTGTCAACCAATCAGAAGACAAGACTGAATGGAACAGAACAACAAACAAAAAACAAGAACTTATGTTTGCTCAATGAAGTAACAAAAGAGAAAATTGNGTAATAGTGAACATGATGTATATTTATACATGTACACCTCTTGGTCAATTTGAAAAATGTCTATAATTGATAATAATTGACGGTGGACAGCAGTGTCGAGTGTTGGTTCAATGGATAANAAGAATGAAAATAAGAAACAGGATACAAATATTAAACCACCAAAAAGG AAAACANAACAACCCATCCTCTAATATTACTCAGTGAATAAAAGAATGAAACAACTCANAGTCTGAATTAATAAAGT ATAATATTTAGAAATAACGTCTACACTGGNTG TAACGATAATGATGANTATAATAAATAACGGCTGTTTGTAAGCGCGCACATAATCTTT ATAAATAAAAACGGTAGACNATAAAGAAAT CGAGCCCTCTAAAACGAAACAATAATGGTact                                                                                                                                                                                 ]
[-] EMBL CD117385             [                                                                                                                                                                                                                                                                                 ATTAGTACTATTAGGAAAAGAGGCAAAGCAGTTGTCAACCAATCAGAAGACAAGTCTGAATGGAACAGAGCAACAAACAAAAAACAAGAACTTATGTTTGTTCAATGAAGTAACAAAAGAGAAAATTGGGTAATAGTGAACATGATGTATATTTATACATGTACACCTCTTGGTCAATTTGAAAAATGTCTATAATTGATAATAATTGACGGTGGACAGCAGTGTCGAGTGTTGGTTCAATGGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD098468             [                                                                                                                                                                                                                                                                                                         AAAGCAGTTGTCAACCAATCAGAAGACAAGACTGAATGGAACAGAACAACAAACAAAAAACAAGAACTTATGTTTGCTCAATGAAGTAACAAAAGAGAAAATTGGGTAATAGTGAACATGATGTATATTTATACATGTACACCTCTTGGTCAATTTGAAAAATGTCTATAATTGATAATAATTGACGGTGGACAGCAGTGTCGAGTGTTGGTTCAATGGATAAAAAGAATGAAAATAAGAAACAGGATACAAATATTAAACCACCAAAAAGGAAAAACAAAACAACCAATCCTCTAATATTACTCAGTGAATAAAAGAATGAACAAACTCAAAGTCTGAATTAAT AAGTAATAATATTTAGAAATAACGTCTACACTGG TGTTAACGATAATGATGATNATAATAGATAACGGCTGTTTGTAGGCGCGCACATt                                                                                                                                                                                                                                                       ]
[+] EMBL CD098422             [                                                                                                                                                                                                                                                                                                         AAAGCAGTTGTCAACCAATCAGAAGACAAGACTGAATGGAACAGAACAACAAACAAAAAACAAGAACTTATGTTTGCTCAATGAAGTAACAAAAGAGAAAATTGGGTAATAGTGAACATGATGTATATTTATACATGTACACCTCTTGGTCAATTTGAAAAATGTCTATAATTGATAATAATTGACGGTGGACAGCAGTGTCGAGTGTTGGTTCAATGGATAAAAAGAATGAAAATAAGAAACAGGATACAAATATTAAACCACCAAAAAGGAAAAACAAAACAAACAATCCTCTAATATTACTCAGTGAATAAAAGAATGAACAAACTCAAAGTCTGAATTAAT AAGTCATAATATTTAGAAATAACGTC                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD111213             [                                                                                                                                                                                                                                                                                                         AAAGCAGTTGTCAACCAATCAGAAGACAAGACTGAATGGAACAGAACAACAAACAAAAAACAAGAACTTATGTTTGCTCAATGAAGTAACAAAAGAGAAAATTGGGTAATAGTGAACATGATGTATATTTATACATGTACACCTCTTGGTCAATTTGAAAAATGTCTATAATTGATAATAATTGACGGTGGACAGCAGTGTCGAGTGTTGGTTCAATGGATAAAAAGAATGAAAATAAGAAACAGGATACAAATATTAAACCACCAAAAAGGAAAAACAAAACAACCAATCCTCTAATATTACTCAGTGAATAAAAGAATGAACAAACTCAAAGTCTGAATTAAT AAGTAATAATATTTAGAAATAACGTC                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD111312             [                                                                                                                                                                                                                                                                                                         AAAGCAGTTGTCAACCAATCAGAAGACAAGACTGAATGGAACTGAACAACAAACAAAAAACAAGAACTTATGTTTGCTCAATGAAGTAACAAAAGAGAAAATTGGGTAATAGTGAACATGATGTATATTTATACATGTACACCTCTTGGTCAATTTGAAAAATGTCTATAATTGATAATAATTGACGGTGGACAGCAGTGTCGAGTGTTGGTTCAATGGATAAAAAGAGTGAAAATAAGAAACAGGATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD168990             [                                                                                                                                                                                                                                                                                                               GTTGTCAACCAATCAGAAGACAAGACTGAATGGAACAGAACAACAAACAAAAAACAAGAACTTATGTTTGCTCAATGAAGTAACAAAAGAGAAAATTGGGTAATAGTGAACATGATGTATATTTATACATGTACACCTCTTGGTCAATTTGAAAAATGTCTATAATTGATAATAATTGACGGTGGACAGCAGTGTCGAGTGTTGGTTCAATGGATAAAAAGAATGAAAATAAGAAACAGGATACAAATATTAAACCACCAAAAAGGAAAAACAAAACAACCAATCCTCTAATATTACTCAGTGAATAAAAGAATGAACAAACTCAAAGTCTGAATTAAT AAGTAATAATATTTAGAAATAACGTCTACACTGG TGTTAACGATAATGATGATAATAATAAATAACGGCTGTTTGTAGGCGCGCACATAATCTTTAATAAATAAAACGGGTAGACAAT AAGAAATCCGAGCCCTCTAAAACGAAACAAATATGGTTACATAAATATATTGGCATATTATATCTGTTACATTTGATAGTAGAATCTAGAGGTGTGTGGAtttctt                                                                                                               ]
[+] EMBL CD119546             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TAACGATAATGATGATAATAATAAATAACGGCTGTTTGTAGGCGCGCACATAATCTTTAATAAATAAAACGGGTAGACAAT AAGAAATCCGAGCCCTCTAAAACGAAACAAATATGGTTACATAAATATATTGGCATATTATATCTGTTACATTTGATAGTAGAATCTAGAGGTGTGTGGACCAGAGAAGAACAGAATAAGTTGACGGTAGAATTCAGAAGAATCTGTAGGACAAACCGTAGGAATGAATACAGAGAGAGAGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGA]
[+] EMBL CD119382             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TAACGATAATGATGATAATAATAAATAACGGCTGTTTGTAGGCGCGCACATAATCTTTAATAAATAAAACGGGTAGACAAT AAGAAATCCGAGCCCTCTAAAACGAAACAAATATGGTTACATAAATATATTGGCATATTATATCTGTTACATTTGATAGTAGAATCTAGAGGTGTGTGGACCAGAGAAGAACAGAATAAGTTGACGGTAGAATTCAGAAGAATCTGTAGGACAAACCGTAGGAATGAATACAGAGAGAGAGAGAGATGTGAGCGAGCGAGTGTATTTTTGAATTGGA]
consensusID : consensus_10072#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 633 fasta sequence 
                              [TTAACGGTAATGATGATAATAATAAATAACGGCTGTTTGTAGGCGCGCACATAATCTTTAATAAATAAAACGGGTATACAATAAGAAATCCGAGCCCTCTAAAACGAAACAAATATGGTTACATAAATATATTGGCATATTATATCTGTTACATTTGATAGTAGAATCTAGAGGTGTGTGGACCAGAGAAGAACAGAATAAGTTGACGGTAGAATTCAGAAGAATCTGTAGGACAAACCGTATGAATGAATACAGAGAGAGAGAGAGATGATAATAACAAGTACTTACATTTGAACCACTATAGAATAAAACTGATGTGGCAATAAAGATTTGTGTTGTGAAATTCTGAGTAGTTTCAATAGTGGTATTCGTAGTAGTAGTGGTGGTAACTTTAGTTATGTTTACGTGGAAATAGGGATATGGAGTGGGACTAAAAGAAAACACATGCTAAAAAAGTGATTTTCATAATGTTATCCCAAAAAGGTCATTGAATAATAATCTAACAAATAGAAATAACACACACATAGATGTATATATATACACAAATATAAGTGACTATCACGATGTACAGTTCATTTATATTAATGATAACAGTATGAAATAATATTAAATTACCTACTTATTGAATAACAA]
[+] EMBL CD184222             [TTAACGGTAATGATGATAATAATAAATAACGGCTGTTTGTAGGCGCGCACATAATCTTTAATAAATAAAACGGGTATACAATAAGAAATCCGAGCCCTCTAAAACGAAACAAATATGGTTACATAAATATATTGGCATATTATATCTGTTACATTTGATAGTAGAATCTAGAGGTGTGTGGACCAGAGAAGAACAGAATAAGTTGACGGTAGAATTCAGAAGAATCTGTAGGACAAACCGTATGAATGAATACAGAGAGAGAGAGAGATGATAATAACAAGTACTTACATTTGAACCACTATAGAATAAAACTGATGTGGCAATAAAGAT                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD067144             [                                                                                                                                                                                                                                      GGACAAACCGTAGGAATGAATACAGAGAGAGAGAGAGATGATAATAACAAGTACTTACATTTGAACCACTATAGAATAAAACTGATGTGGCAATAAAGATTTGTGTTGTGAAATTCTGAGTAGTTTCAATAGTGGTATTCGTAGTAGTAGTGGTGGTAACTTTAGTTATGTTTACGTGGAAATAGGGATATGGAGTGGGACTAAAAGAAAACACATGCTAAAAAAGTGATTTTCATAATGTTATCCCAAAAAGGTCATTGAATAATAATCTAACAAATAGAAATAACACACACATAGATGTATATATATACACAAATATAAGTGACTATCACGATGTACAGTTCATTTATATTAATGATAACAGTATGAAATAATATTAAATTACCTACTTATTGAATAACAA]
consensusID : consensus_10072#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 170 fasta sequence 
                              [GGACAAACCGTCGGAGTGAATACAGACAGAGATACAGATGATGGTAACAGGTACTTACTTTTGAACCACTATAGAATAAAACTGATGTGGCAATAAAGATTTGTGTTGCGAAATTTTGAGTAGTTATATTATTGACATTCGTAGTAGTAGTGGTGGTAACTTTAGTTATG]
[+] EMBL CD067145             [GGACAAACCGTCGGAGTGAATACAGACAGAGATACAGATGATGGTAACAGGTACTTACTTTTGAACCACTATAGAATAAAACTGATGTGGCAATAAAGATTTGTGTTGCGAAATTTTGAGTAGTTATATTATTGACATTCGTAGTAGTAGTGGTGGTAACTTTAGTTATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10072#1      ------------------------------------------------------------
consensus_10072#2      ------------------------------------------------------------
consensus_10072#0      GGGGACAGACAGAAAATTGTATATAAGTTGGTTGTGTATGTGATAGTTACAGGACAAGTT 60
                                                                                   
consensus_10072#1      ----------------------TTAACGGTAATGATGATAATAATAAATAACGGCTGTTT 38
consensus_10072#2      ------------------------------------------------------------
consensus_10072#0      AATTTAAAACGTTCATTGAATAAAATCTAAACAGGATATGCCATTTACCAATGGTCTTTT 120
                                                                                   
consensus_10072#1      GTAGGCGCGCACATAATCTTTAATAAATAAAACGGGTATACAATAAGAAATCCGAGCCCT 98
consensus_10072#2      ------------------------------------------------------------
consensus_10072#0      TTTATTACATATCAAACAACAAGGAAATAATTACGATAACAATAATGAGAATGAAATTTA 180
                                                                                   
consensus_10072#1      CTAAAACGAAACAAATATGGTTACATAAATATATTGGCATATTATATCTGTTACATTTGA 158
consensus_10072#2      ------------------------------------------------------------
consensus_10072#0      TTGATAGCTAACAAACACATGGGTGGCAACAATAATAATCACAATGGTGGGAGTACAGGA 240
                                                                                   
consensus_10072#1      TAGTAGAATCTAGAGGTGTGTGGACCAGAGAAGAACAGAATAAGTTGACGGTAGAATTCA 218
consensus_10072#2      ------------------------------------------------------------
consensus_10072#0      GTAGTGAGGGTTTCAACCTCTACTACTATTACTATTACTACTACTAGGAAAAGAGGCAAA 300
                                                                                   
consensus_10072#1      GAAGAATCTGTAGGA-CAAACCGTATGAATGAAT---ACAGAGAGAGAGAGAGATGATAA 274
consensus_10072#2      ------------GGA-CAAACCGTCGGAGTGAAT---ACAGACAGAGATACAGATGATGG 44
consensus_10072#0      GCAGTTGTCAACCAATCAGAAGACAAGACTGAATGGAACAGAACAACAAACAAAAAACAA 360
                                     * ** *      ** *****   *****   * * * * *  *   
consensus_10072#1      TAACAAGTACTTACATT-TGAACCACTATAGAATAAAACTGATGTGGCAATAAA---GAT 330
consensus_10072#2      TAACAGGTACTTACTTT-TGAACCACTATAGAATAAAACTGATGTGGCAATAAA---GAT 100
consensus_10072#0      GAACTTATGTTTGCTCAATGAAGTAACAAAAGAGAAAATTGG-GTAATAGTGAACATGAT 419
                        ***   *  ** *    ****  *  * *  * **** **  **   * * **   ***
consensus_10072#1      TTGTGTTGTGAAAT--------TCTGAGTAGTTTCAATAGTGGT----ATTCGTAGTAGT 378
consensus_10072#2      TTGTGTTGCGAAAT--------TTTGAGTAGTTATATTATTGAC----ATTCGTAGTAGT 148
consensus_10072#0      GTATATTTATACATGTACACCTCTTGGTCAATTTGAAAAATGTCTATAATTGATAATAAT 479
                        * * **   * **          **   * **  *  * **      ***  ** ** *
consensus_10072#1      AG-TGGTGGTAACTTTAGTTATGTTTACGTGGAAATAGGGATATGGAGTGGGACTAAAAG 437
consensus_10072#2      AG-TGGTGGTAACTTTAGTTATG------------------------------------- 170
consensus_10072#0      TGACGGTGGACAGCAGTGTCGAGTGTTGGTTCAATGGATAAAAAGAATGAAAATAAGAAA 539
                        *  *****  *     **   *                                     
consensus_10072#1      AAAACACATGCTAAAAAAGTGATTTTCATAATGTTATCCCAAAAAGGTCATTGAATAATA 497
consensus_10072#2      ------------------------------------------------------------
consensus_10072#0      CAGGATACAAATATTAAACCACCAAAAAGGAAAAACAAAACAACCAATCCTCTAATATTA 599
                                                                                   
consensus_10072#1      ATCTAACAAATAGAAATAACACACACATAGATGTATATATATACACAAATATAAGTGACT 557
consensus_10072#2      ------------------------------------------------------------
consensus_10072#0      CTCAGTGAATAAAAGAATGAACAAACTCAAAGTCTGAATTAATAAGTAATAATATTTAGA 659
                                                                                   
consensus_10072#1      ATCACGATGTACAGTTCATTTATATTAATGATAACAGTATGAAATAATATTAAATTACCT 617
consensus_10072#2      ------------------------------------------------------------
consensus_10072#0      AATAACGTCTACACTGGTGTAACGATAATGATGATAATAATAAATAACGGCTGTTTGTAG 719
                                                                                   
consensus_10072#1      ACTTATTGAATAACAA-------------------------------------------- 633
consensus_10072#2      ------------------------------------------------------------
consensus_10072#0      GCGCGCACATAATCTTTAATAAATAAAACGGGTAGACAATAAGAAATCCGAGCCCTCTAA 779
                                                                                   
consensus_10072#1      ------------------------------------------------------------
consensus_10072#2      ------------------------------------------------------------
consensus_10072#0      AACGAAACAAATATGGTTACATAAATATATTGGCATATTATATCTGTTACATTTGATAGT 839
                                                                                   
consensus_10072#1      ------------------------------------------------------------
consensus_10072#2      ------------------------------------------------------------
consensus_10072#0      AGAATCTAGAGGTGTGTGGACCAGAGAAGAACAGAATAAGTTGACGGTAGAATTCAGAAG 899
                                                                                   
consensus_10072#1      ------------------------------------------------------------
consensus_10072#2      ------------------------------------------------------------
consensus_10072#0      AATCTGTAGGACAAACCGTAGGAATGAATACAGAGAGAGAGAGAGATGTGAGCGAGCGAG 959
                                                                                   
consensus_10072#1      -----------------
consensus_10072#2      -----------------
consensus_10072#0      TGTATTTTTGAATTGGA 976
                                        
 | 
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||