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Schistosoma mansoni
cluster # 10087 cluster # 10087       Sequences # 13       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10087#0 length = 946 sequences # 6  
consensus_10087#1 length = 863 sequences # 4  
consensus_10087#2 length = 619 sequences # 2  
consensus_10087#3 length = 248 sequences # 1  

consensusID : consensus_10087#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 946
fasta sequence
                              [CCTCGGGCCAANAATTCGGCACGAGG---------AAAACC-ACACATTGTGAACCGATTCTATTAAATGCTTACAAAGAAGCTATAAAATTACCAAGTCTTGATGAAATGTTTCTCTTCGTAACGCATACAATAAGCTTAGTGCCTATTCATTCACCTCTCTCAGAATCAATTTGGTCAGCTATTCGAGAACTGTTTACAGTTGGTCGATCAAAGACTGCTGAAACTTCTTTGCATCAAAGAGTTCCAGGTGGTTTAATTCCTCAGTGCTTATCACTAAATAATCTTGTTCAAAATATAAAATCATTTCGCCAGAAACGAGCTCAATTGCCTAGTTACAACAACTTAGTAGGTGTATCACAAGCTCGATATCAACCATCATTAGTACAAATGATGAAAGATTTGGTATTAGCTCGGGAAAATCCTTCGGAAGCCAGTCCTGCATTAAACGGGATAGTTCGTAAGCCGTGCGCATCTTTATCGAGCAATTGGTTAGGAGAATTAAGTCGATTCATTCGAATTCCCGGTGGTAGCGGAGGCGTCGGGGAAAATGAAAAATATTCTCTGTACAAATCTGATTATATTATTCTGGTGCCAAT-G-GGTAGTGGTAGTTTACCTATTGGATTATGTCGTGAACTATTTGAAGTTATTTCACCATCCCACTCAATGGTAAATAATAAGCCCTGTTCAATGTTCAAACTAAAAATCATTATCAGTGGTTTCACTGGTGGCCAAGGCGGATTGTCAAGTCTTCTACTGATGGATATGNTATAATAATAGGCATTA-TATTATACATTTTC-ACTAGTCATTATTA-TTTCTTTGGCCATCTA-CTACTATTC--TGTGGAAGCGAGTTTCTCTACTTCTATGTTGGCACACTTTACTTGCTCAATATGTCGGCTTTTTAACTGCGACTTTGAGAATGGTGTTTTGTTCCATGGTTCCAATATGCATGGATA]

[+] EMBL CD080051             [CCTCGGGCCAANAATTCGGCACGAGG         AAAACC ACACATTGTGAACCGATTCTATTAAATGCTTACAAAGAAGCTATAAAATTACCAAGTCTTGATGAAATGTTTCTCTTCGTAACGCATACAATAAGCTTAGTGCCTATTCATTCACCTCTCTCAGAATCAATTTGGTCAGCTATTCGAGAACTGTTTACAGTTGGTCGATCAAAGACTGCTGAAACTTCTTTGCATCAAAGAGTTCCAGGTGGTTTAATTCCTCAGTGCTTATCACTAAATAATCTTGTTCAAAATATAAAATCATTTCGCCAGAAACGAGCTCAATTGCCTAGTTACAACAACTTAGTAGGTGTATCACAAGCTCGATATCAACCATCATTAGTACAAATGATGAAAGATTTGGTATTAGCTCGGGAAAATCCTTCGGAAGCCAGTCCTGCATTAAACGGGATAGTTCGTAAGCCGTGCGCATCTTTATCGAGCAATTGGTTAGGAGAATTAAGTCGATTCATTCGAATTCCCGGTGGTAGCGGAGGCGTCGGGGAAAATGAAAAATATTCTCTGTACAAATCTGATTATATTATTCTGGTGCCAATGG GGTAGTGGTAGTTTACCTATTGGATTATGTCGTGAACTATTTGAAGTTATTTCACCATCCCACTCAATGGTAAATAATAAGCCCTGTTCAATGTTCAAACTAAAAATCATTATCAGTGGTTTCACTGGTGGCCAAGGCGGATTGTCAAGTCTTCTACTGATGGATATGNTATAATAATAGGCATTA TATTATACATTTTC ACTAGTCATTATTA TTTCTTTGGCCATCTA CTACTATTC  TGTGGAAGCGAGTTTCTCTACTTCTATGTTGGCACACTTTACTTGCTCAATATGTCGGCTTTTTAACTGCGACTTTGAGAATGGTGTTTTGTTCCATGGTTCCAATATGCATGGATA]
[+] EMBL CD080758             [ctcCGGGCCAA GATTCGGCACGAGGACAACTTCAAAAACCAACACATTGTGAACCGATTCTATTAAATGCTTACAAAGAAGCTATAAAATTACCAAGTCTTGATGAAATGTTTCTCTTCGTAACGCATACAATAAGCTTAGTGCCTATTCATTCACCTCTCTCAGAATCAATTTGGTCAGCTATTCGAGAACTGTTTACAGTTGGTCGATCAAAGACTGCTGAAACTTCTTTGCATCAAAGAGTTCCAGGTGGTTTAATTCCTCAGTGCTTATCACTAAATAATCTTGTTCAAAATATAAAATCATTTCGCCAGAAACGAGCTCAATTGCCTAGTTACAACAACTTAGTAGGTGTATCACAAGCTCGATATCAACCATCATTAGTACAAATGATGAAAGATTTGGTATTAGCTCGGGAAAATCCTTCGGAAGCCAGTCCTGCATTAAACGGGATAGTTCGTAAGCCGTGCGCATCTTTATCGAGCAATTGGTTAGGAGAATTAAGTCGATTCATTCGAATTCCCGGTGGTAGCGGAGGCGTCGGGGAAAATGAAAAATATTCTCTGTACAAATCTGATTATATTATTCTGGTGCCAAT GNGGTAGTGGTAGTTTACCTATTGGATTATGTCGTGAACTATTTGAAGTTATTTCACCATCCCACTCAATGGTAAATAAATAGCCCTGTTCAATGTTCANACTANAAAT                                                                                                                                                                                                                                                               ]
[+] EMBL CD137405             [                                                                                                                                                                            TTTGGTCAGCTATTCGAGAACTGTTTACAGTTGGTCGATCAAAGACTGCTGAAACTTCTTTGCATCAAAGAGTTCCAGGTGGTTTAATTCCTCAGTGCTTATCACTAAATAATCTTGTTCAAAATATAAAATCATTTCGCCAGAAACGAGCTCAATTGCCTAGTTACAACAACTTAGTAGGTGTATCACAAGCTCGATATCAACCATCATTAGTACAAATGATGAAAGATTTGGTATTAGCTCGGGAAAATCCTTCGGAAGCCAGTCCTGCATTAAACGGGATAGTTCGTAAGCCGTGCGCATCTTTATCGAGCAATTGGTTAGGAGAATTAAGTCGATTCATTCGAATTCCCGGTGGTAGCGGAGGCGTCGGGGAAAATGAAAAATATTCTCTGTACAAATCTGATTATATTATTCTGGTGCCAAT G GGTAGTGGTAGTTTACCTATTGGATTATGTCGTGAACTATNTGAAGTTATTTCACCATCCCACTCAATGGTAAATAATAAGCCCTGTTCAATGNTCAAACTAAAAATCATTATCAGTGGTTTCACTGGTGGCCAAGGCGGATTGTCAAGTCTTCTACTGATGGATATGTAATAATAATAGGCATTATTATTATACATTTTCAACTAGTCATTATTATTTTCTTTGCACATCTACCTACTATTCTTTGTGAAAGCGAATTTC                                                                                                     ]
[+] EMBL CD113600             [                                                                                                                                                                                  CAGCTATTCGATAACTGTTTACAGGTGGTCGATCAAAGACTGCTGAAACTTCTTTGCATCAAAGAGTTCCAGGTGGTTTAATTCCTCAGTGCTTATCACTAAATAATCTTGTTCAAAATATAAAATCATTTCGCCTGAAACGAGCTCAATTGCCTAGTTACAACATCTTAGTGGGTGTATCACAAGCTCGATATCAACCg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD113673             [                                                                                                                                                                                   AGCTATTCGAGAACTGTTTACAGTTGGTCGATCAAAGACTGCTGAAACTTCTTTGCATCAAAGAGTTCCAGGTGGTTTAATTCCTCAGTGCTTATCACTAAATAATCTTGTTCAAAATATAAAATCATTTCGCCAGAAACGAGCTCAATTGCCTAGTTACAACAACTTAGTAGGTGTATCACAAGCTCGATATCAACCATCATTAGTACAAATGATGAAAGATTTGGTATTAGCTCGGGAAAATCCTTCGGAAGCCAGTCTTGCATTAAACGGGATAGTTCGTAAGCCGTGCGCATCTTTATCGAGCAATTGGTTAGGAGAATTAAGTCGATTCATTCGAATTCCCGGTGGTAGCGGAGGCGTCGGGGAAAATGAAAAATATTCTCTGTACAAATCTGATTATATTATTCTGGTGCCAAT G GGTAGTGGTAGTTTACCTATTGGATTATGTCGTGAAAAAAAAAAAGTTATTTCACCATCCCACTCAATGGTAAATAATAAGCCCTGTTCAATGTTCAAACTAAAAATCATTATCA                                                                                                                                                                                                                                                       ]
[-] EMBL CD097273             [                                                                                                                                                                                                                                                                   TTCCTCAGTGCTTATCACTAAATAATCTTGTTCAAAATATAAAATCATTTCGCCAGAAACGAGCTCAATTGCCTAGTTACAACAACTTAGTAGGTGTATCACAAGCTCGATATCAACCATCATTAGTACAAATGATGAAAGATTTGGTATTAGCTCGGGAAAATCCTTCGGAAGCCAGTCCTGCATTAAACGGGATAGTTCGTAAGCCGTGCGCATCTTTATCGAGCAATTGGTTAGGAGAATTAAGTCGATTCATTCGAATTCCCGGTGGTAGCGGAGGCGTCGGGGAAAATGAAAAATATTCTCTGTACAAGTCTGATTATATTATTCTGGTGCCAAT G GGTAGTGGTAGTTTACCTATTGGATTATGTCGTGAACTATTTGAAGTTATTTCACCATCCCACTCAATGGTAAATAATAAGCCCTGTTCAATGTTCAAACTAAAAATCATTATCAGTGG                                                                                                                                                                                                                                                   ]


>consensus_10087#0 CCTCGGGCCAANAATTCGGCACGAGGAAAACCACACATTGTGAACCGATTCTATTAAATG CTTACAAAGAAGCTATAAAATTACCAAGTCTTGATGAAATGTTTCTCTTCGTAACGCATA CAATAAGCTTAGTGCCTATTCATTCACCTCTCTCAGAATCAATTTGGTCAGCTATTCGAG AACTGTTTACAGTTGGTCGATCAAAGACTGCTGAAACTTCTTTGCATCAAAGAGTTCCAG GTGGTTTAATTCCTCAGTGCTTATCACTAAATAATCTTGTTCAAAATATAAAATCATTTC GCCAGAAACGAGCTCAATTGCCTAGTTACAACAACTTAGTAGGTGTATCACAAGCTCGAT ATCAACCATCATTAGTACAAATGATGAAAGATTTGGTATTAGCTCGGGAAAATCCTTCGG AAGCCAGTCCTGCATTAAACGGGATAGTTCGTAAGCCGTGCGCATCTTTATCGAGCAATT GGTTAGGAGAATTAAGTCGATTCATTCGAATTCCCGGTGGTAGCGGAGGCGTCGGGGAAA ATGAAAAATATTCTCTGTACAAATCTGATTATATTATTCTGGTGCCAATGGGTAGTGGTA GTTTACCTATTGGATTATGTCGTGAACTATTTGAAGTTATTTCACCATCCCACTCAATGG TAAATAATAAGCCCTGTTCAATGTTCAAACTAAAAATCATTATCAGTGGTTTCACTGGTG GCCAAGGCGGATTGTCAAGTCTTCTACTGATGGATATGNTATAATAATAGGCATTATATT ATACATTTTCACTAGTCATTATTATTTCTTTGGCCATCTACTACTATTCTGTGGAAGCGA GTTTCTCTACTTCTATGTTGGCACACTTTACTTGCTCAATATGTCGGCTTTTTAACTGCG ACTTTGAGAATGGTGTTTTGTTCCATGGTTCCAATATGCATGGATA



consensusID : consensus_10087#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 863
fasta sequence
                              [ATCAATTGTTTGTGACCCGATTGCATGTTTAGAGCCGTATACAAGATCAAATCATTTGCTAGATACCATTTTCGCTGAATTATCTCCTGACGGTCACCGGATCAATGTGTCTTGGGAACACTTATCCAAGTGCCCATCTGAAAATAAAAGCTACGTGAAAACGTTATCACATGACCTGTGTACAGATTTATTGCAGTCAGTGGATATATCTGTAAATCCCTTACTTGATGATTACTTCATGTTAAAAGAGCATGCATCACTCTCTAAAATCCAACAAAACTTGCTAAATATCGCTGAGTTGATACACTATGAGTTACCTGAATTGTCTGAACCACCAAGAACCAAGGCAAAATGGGCTGATCTGTTACGAAGCCAAATTAAGGAACTATTCATACCAATTTGTAAATCAGGTTGTTTCGACCTTCTAAATCATATTCAGTTAACTCTAGCTGTAATTCATACATTCGATTCAATTACAAG-TCGCAAT-CGATACCATCATACTGTTCACAATGATATGATTAGTATGGAGAAATTATTGGTTAAGTTTGAACGTTCTTTATTGGTTGCCAGTCAGGCTGATGCTAAACTTATTCAACAACTTCAAAAACCAACACATTGCGAACCGATTCTATTAAATGCTTACAAAGAAGCTATAAAATTACCAAGTCTTGATGAAATGTTTCTCTTCGTAACGCATACAATAAGCTTAGTGCCTATTCATTCACCTTTCTCAGAATCAATTTGGGCAGCTATTCAAGAACTGTTTACAGATGGTCGATCAAAGACTGCTGAAACTTCTTTGCATCAAAGAGCTCCAGGTGGTTTAATTCCTCAGTGCTTATCACTAAATAATCTTGTTCAAA]

[+] EMBL CD190461             [ATCAATTGTTTGTGACCCGATTGCATGTTTAGAGCCGTATACAAGATCAAATCATTTGCTAGATACCATTTTCGCTGAATTATCTCCTGACGGTCACCGGATCAATGTGTCTTGGGAACACTTATCCAAGTGCCCATCTGAAAATAAAAGCTACGTGAAAACGTTATCACATGGCCTGTGTACAGATTTATTGCAGTCACCCCCTATATCTGTAAATCCCTTACTTGATGATTACTTCATGTTAAAAGAGCATGCATCACTCTCTAAAATCCAACAAAACTTGCTAAATATCGCTGAGTTGATACACTATGAGTTACCTGAATTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD199208             [                                            GATCAAATCATTTGCTAGATACCATTTTCGCTGAATTATCTCCTGACGGTCACCGGATCAATGTGTCTTGGGAACACTTATCCAAGTGCCCATCTGAAAATAAAAGCTACGTGAAAACGTTATCACATGACCTGTGTACAGATTTATTGCAGTCAGTGGATATATCTGTAAATCCCTTACTTGGTGATTACTTCATGTTAAAAGAGCATGCATCACTCTCTAAAATCCAACAAAACTTGCTAAATATCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD183209             [                                                                                                             TCTTGGGAACACTTATCCAAGTGCCCATCTGAAAATAAAAGCTACGTGAAAACGTTATCACATGACCTGTGTACAGATTTATTGCAGTCAGTGGATATATCTGTAAATCCCTTACTTGATGATTACTTCATGTTAAAAGAGCATGCATCACTCTCTAAAATCCAACAAAACTTGCTAAATATCGCTGAGTTGATACACTATGAGTTACCTGAATTGTCTGAACCACCAAGAACCAAGGCAAAATGGGCTGATCTGTTACGAAGCCAAATTAAGGAACTATTCATACCAATTTGTAAATCAGGTTGTTTCGACCTTCTAAATCATATTCAGTTAACTCTAGCTGTAATTCATACATTCGATTCAATTACAAG TCGCAAT CGATACCATCATACTGTTCACAATGATATGATTAGTATGGAGAAATTATTGGTTAAGTTTGAACGTTCTT                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD082245             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACAAGTTCGCAATACGATACCATCATACTGTACACAATGATATGATTAGTATGGAGAAATTATTGGTTAAGTTTGAACGTTCTTTATTGGTTGCCAGTCAGGCTGATGCTAAACTTATTCAACAACTTCAAAAACCAACACATTGCGAACCGATTCTATTAAATGCTTACAAAGAAGCTATAAAATTACCAAGTCTTGATGAAATGTTTCTCTTCGTAACGCATACAATAAGCTTAGTGCCTATTCATTCACCTTTCTCAGAATCAATTTGGGCAGCTATTCAAGAACTGTTTACAGATGGTCGATCAAAGACTGCTGAAACTTCTTTGCATCAAAGAGCTCCAGGTGGTTTAATTCCTCAGTGCTTATCACTAAATAATCTTGTTCAAA]


>consensus_10087#1 ATCAATTGTTTGTGACCCGATTGCATGTTTAGAGCCGTATACAAGATCAAATCATTTGCT AGATACCATTTTCGCTGAATTATCTCCTGACGGTCACCGGATCAATGTGTCTTGGGAACA CTTATCCAAGTGCCCATCTGAAAATAAAAGCTACGTGAAAACGTTATCACATGACCTGTG TACAGATTTATTGCAGTCAGTGGATATATCTGTAAATCCCTTACTTGATGATTACTTCAT GTTAAAAGAGCATGCATCACTCTCTAAAATCCAACAAAACTTGCTAAATATCGCTGAGTT GATACACTATGAGTTACCTGAATTGTCTGAACCACCAAGAACCAAGGCAAAATGGGCTGA TCTGTTACGAAGCCAAATTAAGGAACTATTCATACCAATTTGTAAATCAGGTTGTTTCGA CCTTCTAAATCATATTCAGTTAACTCTAGCTGTAATTCATACATTCGATTCAATTACAAG TCGCAATCGATACCATCATACTGTTCACAATGATATGATTAGTATGGAGAAATTATTGGT TAAGTTTGAACGTTCTTTATTGGTTGCCAGTCAGGCTGATGCTAAACTTATTCAACAACT TCAAAAACCAACACATTGCGAACCGATTCTATTAAATGCTTACAAAGAAGCTATAAAATT ACCAAGTCTTGATGAAATGTTTCTCTTCGTAACGCATACAATAAGCTTAGTGCCTATTCA TTCACCTTTCTCAGAATCAATTTGGGCAGCTATTCAAGAACTGTTTACAGATGGTCGATC AAAGACTGCTGAAACTTCTTTGCATCAAAGAGCTCCAGGTGGTTTAATTCCTCAGTGCTT ATCACTAAATAATCTTGTTCAAA



consensusID : consensus_10087#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 619
fasta sequence
                              [ACGGGATAGTTCGTAAGCCGTGCGCATCTTTATCGAGCAATTGGTTAGGAGAATTAAGTCGATTCATTCGAATTCCCGGTGGTAGCGGAGGCGTCGGGGAAAATGAAAAATATTCTCTGTACAAATCTGATTATATTATTCTGGTGCCAATGGGTAGTGGTAGTTTACCTATTGGATTATGTCGTGAACTATTTGAAGTTATTTCACCATCCCACTCAATGGTAAATAATAAGCCCTGTTCAATGTTCAAACTAAAAATCATTATCAGTGGTTTCACTGGTGGCCAAGGCGGATTGTCAAGTCTTCTACTGATGGATATGTAATAATAATAGGCATTATTATTATACATTTTCAACTAGTCATTATTATTTCTTTGGCACATCTACCTACTATTCTTGTTGAAAGCGAAGTTTCCTCTACATTCTATGGGTGTGCACACTTTTTACTTTGCCTCAAATATGTCTGTCTTTTTTTAACCTGTCGATCTTTTGAGTAATTTGTTGTTTTATGTATACGATTGATTTACGAAATAAGTGACAATGATAATAATATTAATATACCTGCTTTATTTGTCTTTTATTTTGTTAATGAGAATAATTAAAACTACAATATTTTCTTT]

[-] EMBL CD074682             [ACGGGATAGTTCGTAAGCCGTGCGCATCTTTATCGAGCAATTGGTTAGGAGAATTAAGTCGATTCATTCGAATTCCCGGTGGTAGCGGAGGCGTCGGGGAAAATGAAAAATATTCTCTGTACAAATCTGATTATATTATTCTGGTGCCAATGGGTAGTGGTAGTTTACCTATTGGATTATGTCGTGAACTATTTGAAGTTATTTCACCATCCCACTCAATGGTAAATAATAAGCCCTGTTCAATGTTCAAACTAAAAATCATTATCAGTGGTTTCACTGGTGGCCAAGGCGGATTGTCAAGTCTTCTACTGATGGATATGTAATAATAATAGGCATTATTATTATACATTTTCAACTAGTCATTATTATTTCTTTGGCACATCTACCTACTATTCTTGTTGAAAGCGAAGTTTCCTCTACATTCTATGGGTGTGCACACTTTTTACTTTGCCTCAAATATGTCTGTCTTTTTTTAACCTGTCGATCTTTTGAGTAATTTGTTGTTTTATGTATACGATTGATTTACGAAATAAGTGACAATGATAATAATATTAATATACCTGCTTTATTTGTCTTTTATTTTGTTAATGAGAATAATTAAAACTACAATATTTTCTTT]
[-] EMBL AI976953             [                                                                                                                                                                                                                                                                                                                                                        TACATTTTCAACTAGTCATTATTATTTTTTTGGCACATCTACCTACTATTTTTGTTGAAAACAAAGTTTCCTCTACATTCAATGGGGGGGCACACTTTTTACTTTGCCTCAAAAAGGTCTGTCTTTTTTAAACCTGTCGATCTTTTGAGAAATTTGTTGTTTTATGTATACGATTGATTTACGAAATAAGTGCCAATGATAATAATATTAAAATACCTGCTTTA                                                   ]


>consensus_10087#2 ACGGGATAGTTCGTAAGCCGTGCGCATCTTTATCGAGCAATTGGTTAGGAGAATTAAGTC GATTCATTCGAATTCCCGGTGGTAGCGGAGGCGTCGGGGAAAATGAAAAATATTCTCTGT ACAAATCTGATTATATTATTCTGGTGCCAATGGGTAGTGGTAGTTTACCTATTGGATTAT GTCGTGAACTATTTGAAGTTATTTCACCATCCCACTCAATGGTAAATAATAAGCCCTGTT CAATGTTCAAACTAAAAATCATTATCAGTGGTTTCACTGGTGGCCAAGGCGGATTGTCAA GTCTTCTACTGATGGATATGTAATAATAATAGGCATTATTATTATACATTTTCAACTAGT CATTATTATTTCTTTGGCACATCTACCTACTATTCTTGTTGAAAGCGAAGTTTCCTCTAC ATTCTATGGGTGTGCACACTTTTTACTTTGCCTCAAATATGTCTGTCTTTTTTTAACCTG TCGATCTTTTGAGTAATTTGTTGTTTTATGTATACGATTGATTTACGAAATAAGTGACAA TGATAATAATATTAATATACCTGCTTTATTTGTCTTTTATTTTGTTAATGAGAATAATTA AAACTACAATATTTTCTTT



consensusID : consensus_10087#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 248
fasta sequence
                              [TAAAGCTGGTATATTAATATTATGTATCATTGGCACTTATTTCTGTAAATCAATCGCATCCGTAAAACAACCAATTACTCAAGAGATCGCCTGGTTAAAAAAAAACAGACCTTTTTGGGGCAAAGTAAAAGGTGTGCACACCCATAAAATGGAGAGGAAACTTTGTTTTCAACAAGAATAGTAGGTAGATGTGCCAAAGAAATAATAATGACTTGTTGAAAATGCATAATAATAATGCCTATTATTAT]

[+] EMBL CD075854             [TAAAGCTGGTATATTAATATTATGTATCATTGGCACTTATTTCTGTAAATCAATCGCATCCGTAAAACAACCAATTACTCAAGAGATCGCCTGGTTAAAAAAAAACAGACCTTTTTGGGGCAAAGTAAAAGGTGTGCACACCCATAAAATGGAGAGGAAACTTTGTTTTCAACAAGAATAGTAGGTAGATGTGCCAAAGAAATAATAATGACTTGTTGAAAATGCATAATAATAATGCCTATTATTAT]


>consensus_10087#3 TAAAGCTGGTATATTAATATTATGTATCATTGGCACTTATTTCTGTAAATCAATCGCATC CGTAAAACAACCAATTACTCAAGAGATCGCCTGGTTAAAAAAAAACAGACCTTTTTGGGG CAAAGTAAAAGGTGTGCACACCCATAAAATGGAGAGGAAACTTTGTTTTCAACAAGAATA GTAGGTAGATGTGCCAAAGAAATAATAATGACTTGTTGAAAATGCATAATAATAATGCCT ATTATTAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10087#0      CCTCGGGCCAANAATTCGGCACGAGGAAAACCACACATTGTGAACCGATTCTATTAAATG 60
consensus_10087#2      ------------------------------------------------------------
consensus_10087#1      ------------------------------------------------------------
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      CTTACAAAGAAGCTATAAAATTACCAAGTCTTGATGAAATGTTTCTCTTCGTAACGCATA 120
consensus_10087#2      ------------------------------------------------------------
consensus_10087#1      ------------------------------------------------------------
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      CAATAAGCTTAGTGCCTATTCATTCACCTCTCTCAGAATCAATTTGGTCAGCTATTCGAG 180
consensus_10087#2      ------------------------------------------------------------
consensus_10087#1      ------------------------------------------------------------
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      AACTGTTTACAGTTGGTCGATCAAAGACTG-CTGAAACTTCTTTGCATCAAAGAGTTCCA 239
consensus_10087#2      ------------------------------------------------------------
consensus_10087#1      -----------ATCAATTGTTTGTGACCCGATTGCATGTTTAGAGCCGTATACAAGATCA 49
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      GGTGGTTTAATTCCTCAGTGCTTATCACTAAATAATCTTGTTCAAAATATAAAATCATTT 299
consensus_10087#2      ------------------------------------------------------------
consensus_10087#1      AATCATTTGCTAGAT--ACCATTTTCGCTGAATTATCTCCTGACGGTCACCGGATCAATG 107
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      CGCCAGAAACGAGCTCAATTGCCTAGTTACAACAACTTAGTAGGTGTATCACAAGCTCGA 359
consensus_10087#2      ------------------------------------------------------------
consensus_10087#1      TGTCTTGGGAACACTTATCCAAGTGCCCATCTGAAAATAAAAGCTACGTGAAAA---CGT 164
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      TATCAACCATCATTAGTACAAATGATGAAAGATTTGGTATTAGCTCGGGAAAATCCTTCG 419
consensus_10087#2      ------------------------------------------------------------
consensus_10087#1      TATCACATGACCTGTGTACAGATTTATTGCAGTCAGTGGATATATCTGTAAATCCCTTAC 224
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      GAAGCCAGTCCTGCATTAAACGGGATAGTTCGTAAGCCGTGCGCATCTTTATCGAGCAAT 479
consensus_10087#2      -------------------ACGGGATAGTTCGTAAGCCGTGCGCATCTTTATCGAGCAAT 41
consensus_10087#1      TTGATGATTACTTCATGTTAAAAGAGCATGCATCACTCTCTAAAATC--CAACAAA-ACT 281
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      TGGTTAGGAGAATTAAGTCGATTCATT-CGAATTCCCGGTGGTAGCGGAGGCGTCGGGGA 538
consensus_10087#2      TGGTTAGGAGAATTAAGTCGATTCATT-CGAATTCCCGGTGGTAGCGGAGGCGTCGGGGA 100
consensus_10087#1      TGCTAAATATCGCTGAGTTGATACACTATGAGTTACCTGAATTGTCTGAACCACCAAGAA 341
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      A-AATGAAAAATATTCT---CTGT-ACAAATCTGA-TTATATTATT-CTGGTGCCAATGG 591
consensus_10087#2      A-AATGAAAAATATTCT---CTGT-ACAAATCTGA-TTATATTATT-CTGGTGCCAATGG 153
consensus_10087#1      CCAAGGCAAAATGGGCTGATCTGTTACGAAGCCAAATTAAGGAACTATTCATACCAATTT 401
consensus_10087#3      --------------------------TAAAGCTGG--TATATTAATATTATGTATCATTG 32
                                                   ** *     **    * *  *       **  

consensus_10087#0      GTAGT---GGTAGTTT--ACCTATTGGATTATGTC--GTGAACTATTTGAAGTTATTTCA 644
consensus_10087#2      GTAGT---GGTAGTTT--ACCTATTGGATTATGTC--GTGAACTATTTGAAGTTATTTCA 206
consensus_10087#1      GTAAATCAGGTTGTTTCGACCTTCTAAATCATATTCAGTTAACT-CTAGCTGTAATTCAT 460
consensus_10087#3      GCACT-----TATTTC--TGTAAATCAATCGCATCC-GTAAAACAACCAA--TTACTCAA 82
                       * *       *  **         *  **    *   ** **          * * *   

consensus_10087#0      CCATCCCACTCAATGGTAAATAATAAGCCCTGTT----CAATGTTCAAACTAAAAATCAT 700
consensus_10087#2      CCATCCCACTCAATGGTAAATAATAAGCCCTGTT----CAATGTTCAAACTAAAAATCAT 262
consensus_10087#1      ACATTCGATTCAATTACAAGTCGCAATCGATACCATCATACTGTTCACAATGATA-TGAT 519
consensus_10087#3      GAGATCGCCTGGTTAAAAAAAAACAGACCTTTTT-------GGGGCAAAGTAAAAGGTGT 135
                            *   *   *   **     *  *  *           *  ** * * * *    *

consensus_10087#0      TATCAGTGGTTTCACTGGTGGCCAAGGCGGATTGTCAAGTCTTCTACTGATGGATATGNT 760
consensus_10087#2      TATCAGTGGTTTCACTGGTGGCCAAGGCGGATTGTCAAGTCTTCTACTGATGGATATGTA 322
consensus_10087#1      TAGTA-TGGAGAAATTATTGGTTAAGTTTGA-----ACGTTCTTTATTGGTTGCCA-GTC 572
consensus_10087#3      GCACACCCATAAAATGGAGAGGAAACTTTGTTTTCAACAAGAATAGTAGGTAGATGTGCC 195
                           *        *      *  **    *      *           * * *    *  

consensus_10087#0      ATAATAATAGGCATTA-T-ATTATACATTTTCA-CTAGTCATTATTATTTCTTTGGC-CA 816
consensus_10087#2      ATAATAATAGGCATTA-TTATTATACATTTTCAACTAGTCATTATTATTTCTTTGGCACA 381
consensus_10087#1      AGGCTGAT-GCTAAAC-TTATTCAACAACTTCA----AAAACCAACACATTGCGAACCGA 626
consensus_10087#3      AAAGAAATAATAATGACTTGTTGAAAATGCATA-ATAATAATGCCTATTATTAT------ 248
                       *     **    *    *  **  * *     *       *     *             

consensus_10087#0      T-CTAC-TACTATTCTG--TGGAAGCGAG--TTTCTCTAC-TTCTATG--TTGGCACACT 867
consensus_10087#2      T-CTACCTACTATTCTTGTTGAAAGCGAAGTTTCCTCTACATTCTATGGGTGTGCACACT 440
consensus_10087#1      TTCTATTAAATGCTTACAAAGAAGCTATAAAATTACCAAGTCTTGATGAAATGTTTCTCT 686
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      TTAC---TTGCTC--AATATGTCGGCTTTTT----AACTG-CGACTTTGAGAATGGTGTT 917
consensus_10087#2      TTTTACTTTGCCTCAAATATGTCTGTCTTTTTTTAACCTGTCGATCTTTTGAGTAATTTG 500
consensus_10087#1      TCGTA--ACGCATACAATAAGCTTAGTGCCTATTCATTCACCTTTCTCAGAATCAATTTG 744
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      --TTGTTCCATGGTTCCAAT--ATGCATGGA-TA-------------------------- 946
consensus_10087#2      --TTGTTTTATGTATACGATTGATTTACGAAATAAGTGACAATGATAATAATA-TTAATA 557
consensus_10087#1      GGCAGCTATTCAAGAACTGTTTACAGATGGTCGATCAAAGACTGCTGAAACTTCTTTGCA 804
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      ------------------------------------------------------------
consensus_10087#2      TACCTGCTTTATTTGTCTTTTATTTTGTTAATGAGAATAATTAAAACTACAATATTTTCT 617
consensus_10087#1      TCAAAGAGCTCCAGGTGGTTTAATTCCTCAGTGCTTATCACTAAATAATCTTGTTCAAA- 863
consensus_10087#3      ------------------------------------------------------------
                                                                                   

consensus_10087#0      --
consensus_10087#2      TT 619
consensus_10087#1      --
consensus_10087#3      --
                         




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)