| These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs : 
 consensusID : consensus_10093#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 662 fasta sequence 
                              [ATCGGCACGAGGCTGATGAGCTTTTTACCACCTGGTGCAGTAGACATCACATCTGAATTACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTCTATGGTTATGGTTCTTCTAGCTTTCATTCATTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATCCAACCTAACTAAGGGAAATAAACTTATTATTGGTACAAATGTGGCCGGTGCTACATGGCCTTTTCTCAGTTCTACTGGATCTGGTTCATTAGCCGAATATATTGTCTGTCCAGCCGATTATGTCGCTCCATTACCTAGTAATGTTTCCTTCATATCTGCAGCTGCATTAGGATATGCTGGTTTAACTGCATGGTCAGCTTTAGTTGATGCTGGTGGAATCAATCCTGCTATTAAGTCATCACCATCAGCTTATTCAATTCTTATAACTGGCGCCACTGGTGGTGTTGGCATGATTGCTGCACAATTGGCTAAACTTTG-GNGTTGGAGAGTTCA]
[+] EMBL CD083424             [ATCGGCACGAGGCTGATGAGCTTTTTACCACCTGGTGCAGTAGACATCACATCTGAATTACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTCTATGGTTATGGTTCTTCTAGCTTTCATTCATTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATCCAACCTAACTAAGGGAAATAAACTTATTATTGGTACAAATGTGGCCGGTGCTACATGGCCTTTTCTCAGTTCTACTGGATCTGGTTCATTAGCCGAATATATTGTCTGTCCAGCCGATTATGTCGCTCCATTACCTAGTAATGTTTCCTTCATATCTGCAGCTGCATTAGGATATGC                                                                                                                                                             ]
[+] EMBL CD154628             [                                                        ATTACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTCTATGGTTATGGTTCTTCTAGCTTTCATTCATTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATCCAACCTAACTAAGGGAAATAAACTTATTATTGGTACAAATGTGGCCGGTGCTACATGGCCTTTTCTCAGTTCTACTGGATCTGGTTCATTAGCCGAATATATTGTCTGTCCAGCCGATTATGTCGCTCCATTACCTAGTAATGTTTCCTTCATATCTGCAGCTGCATTAGGATATGCTGGTTTAACTGCATGGTCAGCTTTAGTTGATGCTGGTGGAATCAATCCTGCTATTAAGTCATCACCATCAGCTTATTCAATTCTTATAACTGGCGCCACTGGTGGTGTTGGCATGATTGCTGCACAATTGGCTAAACTTTGNNNGTTGGAGAGTTCA]
[+] EMBL CD154651             [                                                        ATTACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTCTATGGTTATGGTTCTTCTAGCTTTCATTCATTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTCATCCAACCTAACTAAGGGAAATAAACTTATTATTGGTACAAATGTGGCCGGTGCTACATGGCCTTTTCTCAGTTCTACTGGATCTGGTTCATTAGCCGAATATATTGTCTGTCCAGCCGATTATGTCGCTCCATTACCTAGTAATGTTTCCTTCATATCTGCAGCTGCATTAGGATATGCTGGTTTAACTGCATGGTCAGCTTTAGTTGATGCTGGTGGAATCAATCCTGCTATTAAGTCATCACCATCAGCTTATTCAATTCTTATAACTGGCGCCACTGGTGGTGTTGGCATGATTGCTGCACAATTGGCTAAACTTTG GNGCTGGAGAG    ]
[+] EMBL CD116065             [                                                        ATTACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTCTATGGTTATGGTTCTTCTAGCTTTCATTCATTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACCTGGTCGTGATTTCTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATCCAACCTAACTAAGGGAAATAAACTTATTATTGGTACAAATGTGGCCGGTGCTACATGGCCTTTTCTCAGTTCTACTGGATCTGGTTCATTAGCCGAATATATTGTCTGTCCAGCCGATTATGTCGCTCCATTACCTAGTAATGTTTCCTTCATATCTGCAGCTGCATTAGGATATGCTGGTTTAACTGCATGGTCAGCTTTAGTTGATGCTGGTGGAATCAATCCTGCTATTAAGTCATCACCATCAGCTTATTCAATTCTTATAACTGGCGCCACTGGTGGTGTTGGCATGATTGCTGCA                                 ]
[+] EMBL CD154341             [                                                        ATTACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTCTATGGTTATGGTTCTTCTAGCTTTCATTCATTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATCCAACCTAACTAAGGGAAATAAACTTATTATTGGTACAAATGTGGCCGGTGCTACATGGCCTTTTCTCAGTTCTACTGGATCTGGTTCATTAGCCGAATATATTGTCTGTCCAGCCGATTATGTCGCTCCATTACCTAGTAATGTTTCCTTCATATCTGCAGCTGCATTAGGATATGCTGGTTTAACTGCATGGTCAGCTTTAGTTGATGCTGGTGGAATCAATCCTGCTATTAAGTCATCACCGTCAGCTTATTCAATTCTTATAACTGGCGCCACTGGTGGTGTTGGCATGATTGCTGCACAA                              ]
[+] EMBL CD154485             [                                                        ATTACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGATCAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTCTATGGTTATGGTTCTTCTAGCTTTCATTCATTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATCCAACCTAACTAAGGGAAATAAACTTATTATTGGTACAAATGTGGCCGGTGCTACATGGCCTTTTCTCAGTTCTACTGGATCTGGTTCATTAGCCGAATATATTGTCTGTCCAGCCGATTATGTCGCTCCATTACCTAGTAA                                                                                                                                                                                                 ]
[+] EMBL CD154365             [                                                                                                                                                                                                                         GTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATCCAACCTAACTAAGGGAAATAAACTTATTATTGGTACAAATGTGGCCGGTGCTACATGGCCTTTTCTCAGTTCTACTGGATCTGGTTCATTAGCCGAATATATTGTCCGTCCAGCCGATTATGTCGCTCCATTACCTAGTAATGTTTCCTTCATATCTGCAGCTGCATTAGGATATGCTGGTTTAACTGCATGGTCAGCTTTAGTTGATGCTGGTGGAATCAACCCTGCTATTAAGTCATCACCATCAGCTTATTCAATTCTTATAACTGGCGCCACTGGTGGTGTTGGCATGATTGCTGCACAATTGGCTAAACTTTG GGGTTGGAGAG    ]
consensusID : consensus_10093#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 476 fasta sequence 
                              [GACATCACATCTGAATTGCACTTCACAAAGCCTAGACGTATGCCCAATATAGCTCGTCCAGACCAACTACTTATTTAGGTTAAAGCAGCATCGCTGAATCCTGTCGATTCTATGACTTGTCTCATGGTATATAGGTTAATTAATATGCTGGTGCATCTCGATTCACGGTCGACTATTACTATCGAAGAATATAGGTGTGTATTTGGCATTACCGTGATGCCACGACAGCAGAAAATGTTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATCCAACCTAACTAAGGGAAATAAACTTATTATTGGTACAAATGTGGCCGGTGCTACATGGCCTTTTCTCAGTTCTACTGGATCTGGTTCATTAGCCGAATATATTGTCTGTCCAGCCAATTACGTCGCTCCATTACCTAGTAATGTTTCCTTCATATCTGCAGCTGCA]
[-] EMBL CD096127             [GACATCACATCTGAATTGCACTTCACAAAGCCTAGACGTATGCCCAATATAGCTCGTCCAGACCAACTACTTATTTAGGTTAAAGCAGCATCGCTGAATCCTGTCGATTCTATGACTTGTCTCATGGTATATAGGTTAATTAATATGCTGGTGCATCTCGATTCACGGTCGACTATTACTATCGAAGAATATAGGTGTGTATTTGGCATTACCGTGATGCCACGACAGCAGAAAATGTTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATCCAACCTAACTAAGGGAAATAAACTTATTATTGGTACAAATGTGGCCGGTGCTACATGGCCTTTTCTCAGTTCTACTGGATCTGGTTCATTAGCCGAATATATTGTCTGTCCAGCCAATTACGTCGCTCCATTACCTAGTAATGTTTCCTTCATATCTGCAGCTGCA]
consensusID : consensus_10093#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 451 fasta sequence 
                              [TATTCATGAAGATACCGTTTGTTCGATATGTTACTCGCTTGCAGAAAACCTGCAGAGTAAAATTATGCAACTGGTGTGGAAATACATAGTATAATATGAAGCCAAAACTTCCAAAAACTATTTCAGCATGGCAGCTGATGAGCTTTTTACCACCTGGTGCAGTAGACATCACATCTGAATTACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTCTATGGTTATGGTTCTTCTAGCTTTCATTCATTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATC]
[-] EMBL CD062327             [TATTCATGAAGATACCGTTTGTTCGATATGTTACTCGCTTGCAGAAAACCTGCAGAGTAAAATTATGCAACTGGTGAGGAAATACATAGTATAATATGAAGCCAAAACTTCCAAAAACTATTTCAGCATGGCAGCTGATGAGCTTTTTACCACCTGGTGCAGTAGACATCACATCTGAATTACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTCTATGGTTATGGTTCTTCTAGCTTTCATTCATTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATC]
[-] EMBL CD122875             [                                                                            TGGAAATACATAGTATAATATGAAGCCAAAACTTCCAAAAACTATTTCAGCATGGCAGCTGATGAGCTTTTTACCACCTGGTGCAGTAGACATCACATCTGAATTACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACTAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTCTATGGTTATGGTTCTTCTAGCTTTCATTCATTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGT         ]
[-] EMBL CD122813             [                                                                            tgttAATACATAGTATAATATGAAGCCAAAACTTCCAAAAACTATTTCAGCATGGCAGCTGATGAGCTTTTTACCACCTGGTGCAGTAGACATCACATATGAATTACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTATATGGTTATGGTTCTTCTAGCTTTCATTCAGTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACCTGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGT         ]
[+] EMBL CD191475             [                                                                                                                                                                                     ACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTCTATGGTTATGGTTCTTCTAGCTTTCATTCATTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTT                                                           ]
[+] EMBL CD077975             [                                                                                                                                                                                                     AGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTAAGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTGCTTGTCTATGGTTATGGTTCTTCTAGCTTTCATTCATTACGTCGCTTTACATCAAAATATGGTTGTTTTGGCTTACCTGATGCCACGACAGCAGAAAATGCTG                                                                      ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10093#0      ------------------------------------------------------------
consensus_10093#1      ------------------------------------------------------------
consensus_10093#2      TATTCATGAAGATACCGTTTGTTCGATATGTTACTCGCTTGCAGAAAACCTGCAGAGTAA 60
                                                                                   
consensus_10093#0      ------------------------------------------------------------
consensus_10093#1      ------------------------------------------------------------
consensus_10093#2      AATTATGCAACTGGTGTGGAAATACATAGTATAATATGAAGCCAAAACTTCCAAAAACTA 120
                                                                                   
consensus_10093#0      --ATCGGCACGAGGCTGATGAGCTTTTTACCACCTGGTGCAGTAGACATCACATCTGAAT 58
consensus_10093#1      --------------------------------------------GACATCACATCTGAAT 16
consensus_10093#2      TTTCAGCATGGCAGCTGATGAGCTTTTTACCACCTGGTGCAGTAGACATCACATCTGAAT 180
                                                                   ****************
consensus_10093#0      TACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTA 118
consensus_10093#1      TGCACTTCACAAAGCCTAGACGTATGCCCAATATAGCTCGTCCAGACCAACTACTTATTT 76
consensus_10093#2      TACACTTCACAAAGACTAGACGTATGCCCAATATAACTCGTCCAGACCAACTACTTATTA 240
                       * ************ ******************** *********************** 
consensus_10093#0      AGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTG-CTTGTCT-ATGGT-TATGGTT 175
consensus_10093#1      AGGTTAAAGCAGCATCGCTGAATCCTGTCGATTCTATGACTTGTCTCATGGTATATAGGT 136
consensus_10093#2      AGGTTAAAGCAGCATCGTTGAATCCTGTCGATTCTTTG-CTTGTCT-ATGGT-TATGGTT 297
                       ***************** ***************** ** ******* ***** *** * *
consensus_10093#0      CTTCTAGCTTTC------------ATTCATTA-CGTCGCTTTACATCAAA--ATATGGTT 220
consensus_10093#1      TAATTAATATGCTGGTGCATCTCGATTCACGGTCGACTATTACTATCGAAGAATATAGGT 196
consensus_10093#2      CTTCTAGCTTTC------------ATTCATTA-CGTCGCTTTACATCAAA--ATATGGTT 342
                           **   * *            *****    ** *  **   *** **  **** * *
consensus_10093#0      GT---TTTGGC-TTACC-TGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACC 275
consensus_10093#1      GTGTATTTGGCATTACCGTGATGCCACGACAGCAGAAAATGTTGACTTTCCTTTTACACC 256
consensus_10093#2      GT---TTTGGC-TTACC-TGATGCCACGACAGCAGAAAATGCTGACTTTCCTTTTACACC 397
                       **   ****** ***** *********************** ******************
consensus_10093#0      TGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATCCAACCT 335
consensus_10093#1      TGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATCCAACCT 316
consensus_10093#2      TGGTCGTGATTTTTCTGGTCAAATAGTTGACATCGGTTCAAAAGTTGCTTTATC------ 451
                       ******************************************************      
consensus_10093#0      AACTAAGGGAAATAAACTTATTATTGGTACAAATGTGGCCGGTGCTACATGGCCTTTTCT 395
consensus_10093#1      AACTAAGGGAAATAAACTTATTATTGGTACAAATGTGGCCGGTGCTACATGGCCTTTTCT 376
consensus_10093#2      ------------------------------------------------------------
                                                                                   
consensus_10093#0      CAGTTCTACTGGATCTGGTTCATTAGCCGAATATATTGTCTGTCCAGCCGATTATGTCGC 455
consensus_10093#1      CAGTTCTACTGGATCTGGTTCATTAGCCGAATATATTGTCTGTCCAGCCAATTACGTCGC 436
consensus_10093#2      ------------------------------------------------------------
                                                                                   
consensus_10093#0      TCCATTACCTAGTAATGTTTCCTTCATATCTGCAGCTGCATTAGGATATGCTGGTTTAAC 515
consensus_10093#1      TCCATTACCTAGTAATGTTTCCTTCATATCTGCAGCTGCA-------------------- 476
consensus_10093#2      ------------------------------------------------------------
                                                                                   
consensus_10093#0      TGCATGGTCAGCTTTAGTTGATGCTGGTGGAATCAATCCTGCTATTAAGTCATCACCATC 575
consensus_10093#1      ------------------------------------------------------------
consensus_10093#2      ------------------------------------------------------------
                                                                                   
consensus_10093#0      AGCTTATTCAATTCTTATAACTGGCGCCACTGGTGGTGTTGGCATGATTGCTGCACAATT 635
consensus_10093#1      ------------------------------------------------------------
consensus_10093#2      ------------------------------------------------------------
                                                                                   
consensus_10093#0      GGCTAAACTTTGGNGTTGGAGAGTTCA 662
consensus_10093#1      ---------------------------
consensus_10093#2      ---------------------------
                                                  
 | 
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||