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Schistosoma mansoni
cluster # 10146 cluster # 10146       Sequences # 13       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10146#0 length = 1086 sequences # 5  
consensus_10146#1 length = 643 sequences # 6  
consensus_10146#2 length = 283 sequences # 1  
consensus_10146#3 length = 237 sequences # 1  

consensusID : consensus_10146#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1086
fasta sequence
                              [CAGGCCATTATTTCGGCACGACGCACATTTTTAACTGATTTCCATAACGACACTCTCCCGTTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACANGCGGTTTCAAAATATATCTTCAGTAAACAAATGCAAATCCCCTGGAGTTTCTTTACATTCTTTGGTCTCACGATTGCATAAAACAAAATGTCGTTCATCCAATGGAGTAGAAACAGTCTTCACTGGTGAACCTTTATCTATGACCACAGAAAACCCGAGATATGCCTCTTCAGATACTGCTCTCGACTTAGCTGTGAACGGTTCGGTCACTACATGTGATTCCGGAAGTCTCAAGGATCCCGGTTCTATGCCTAACAGTGATGAGCATTCAGATGCCGACTGTATTTCTAATAAGAACCCTAACGCGACAATTCCTGATGATGACTCGAACGTTGAAGTCATATCAAACAATCATGGATGCATAAATTTGGGTCCAAAACGTCGTTTTACTGTTGGGTCTGATGTAGATGGTGCTTCAACTTTGATGTACCGAGCCACTCAACTGATTAAACGTTCTCGACGTAAATTTTTGTCGTTAGCTGAACTTCGTCGTTTCGGTCGTCATCCTTGGTTTGATTTTAATGTGGGTTTACATTCACAAAATGGTCAACATCCCGTTTCTTCTTCAAATTTAAAGAAGAAATCTCATACAGTCACAACCAATTCGACTGCAGAAACTGATCTTCCAAATCCTGGTATTGTCACTTCATCGTCAAGTGCACATTGAATTCAGAATATATCGTCCCATTACTTCATTTCCATAATAGGACATTTTCAACATTTTTGTGTTTTTACTGTTACTTTTGCATGAGGCTATTATGTCAGACATTAATACTGATAGAATTGTGAAACTTATTTCAATCTTATTCCAGTATCGTCTTCACCATTCATTAGATTCGCCGGGGATTAAAAGTTAGTATTCATCATCTTATCACTTCATTGTTTGGTGATAGACCTGTGATATCTCTCCTTATGCTTCCTTGTCTAAGTATAAAAATGCTCATCTGATCCATTTTGATCTCCATTGCTATAGNATTGATA]

[+] EMBL CD081654             [CAGGCCATTATTTCGGCACGACGCACATTTTTAACTGATTTCCATAACGACACTCTCCCGTTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACANGCGGTTTCAAAATATATCTTCAGTAAACAAATGCAAATCCCCTGGAGTTTCTTTACATTCTTTGGTCTCACGATTGCATAAAACAAAATGTCGTTCATCCAATGGAGTAGAAACAGTCTTCACTGGTGAACCTTTATCTATGACCACAGAAAACCCGAGATATGCCTCTTCAGATACTGCTCTCGACTTAGCTGTGAACGGTTCGGTCACTACATGTGATTCCGGAAGTCTCAAGGATCCCGGTTCTATGCCTAACAGTGATGAGCATTCAGATGCCGACTGTATTTCTAATAAGAACCCTAACGCGACAATTCCTGATGATGACTCGAACGTTGAAGTCATATCAAACAATCATGGATGCATAAATTTGGGTCCAAAACGTCGTTTTACTGTTGGGTCTGATGTAGATGGTGCTTCAACTTTGATGTACCGAGCCACTCAACTGATTAAACGTTCTCGACGTAAATTTTTGTCGTTAGCTGAACTTCGTCGTTTCGGTCGTCATCCTTGGTTTGATTTTAATGTGGGTTTACATTCACAAAATGGTCAACATCCCGTTTCTTCTTCAAATTTAAAGAAGAAATCTCATACAGTCACAACCAATTCGACTGCAGAAACTGATCTTCCAAATCCTGGTATTGTCACTTCATCGTCAAGTGCACATTGAATTCAGAATATATCGTCCCATTACTTCATTTCCATAATAGGACATTTTCAACATTTTTGTGTTTTTACTGTTACTTTTGCATGAGGCTATTATGTCAGACATTAATACTGATAGAATTGTGAAACTTATTTCAATCTTATTCCAGTATCGTCTTCACCATTCATTAGATTCGCCGGGGATTAAAAGTTAGTATTCATCATCTTATCACTTCATTGTTTGGTGATAGACCTGTGATATCTCTCCTTATGCTTCCTTGTCTAAGTATAAAAATGCTCATCTGATCCATTTTGATCTCCATTGCTATAGNATTGATA]
[+] EMBL BE505107             [                                                           GTTGTTGACTAAGCTTACTCCAGCTGAATCTCAT AACTTACACA GCGGTTTC GAATATATCTTCAGT AAC AATGC AATCCCCTGGAGTTTCTTTACATTCTTTGGTCTCACGATTGCATAAAACAAAATGTCGTTCATCCAATGGAGTAGAAACAGTCTTCACTGGTGAACCTTTATCTATGACCACAGAAAACCCGAGATATGCCTCTTCAGATACTGCTCTCGACTTAGCTGTGAACGGTTCGGTCACTACATGTGATTCCGGAAGTCTCAAGGATCCCGGTTCTATGCCTAACAGTGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD178733             [                                                                                                                                                                                                                                                                                                      AGCTGTGGACGGTTCGGTCACTACATGTGATTCCGGAAGTCTCAAGGATCCCGGTTCTATGCCTAACAGTGATGAGCATTCAGATGCCGACTGTATTTCTAATAAGAACCCTAACGCGACAATTCCTGATGATGACTCGAACGTTGAAGTCATATCAAACAATCATGGATGCATAAATTTGGGTCCAAAACGTCGTTTTACTGTTGGGTCTGATGTAGATGGTGCTTCAACTTTGATGTACCGAGCCACTCAACTGATTAAACGTTCTCGACGTAAATTTTTGTCGTTAGCTGAACTTCGTCGTTTTGGTCGTCATCCTTGGTTTGATTTTAATGTGGGTTTACATTCACAAAATGGTCAACATCCCGTTTCTTCTTCAAATTTAAAGAAGAAATCTCATACAGTCACAACCAATTCGACTGC                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD083812             [                                                                                                                                                                                                                                                                                                                                                                                cacgaggAGATGCCGACTGTATTTCTAATAAGAACCCTAACGCGACAATTCCTGATGATGACTCGAACGTTGAAGTCATATCAAACAATCATGGATGCATAAATTTGGGTCCAAAACGTCGTTTTACTGTTGGGTCTGATGTAGATGGTGCTTCAACTTTGATGTACCGAGCCACTCAACTGATTAAACGTTCTCGACGTAAATTTTTGTCGTTAGCTGAACTTCGTCGTTTCGGTCGTCATCCTTGGTTTGATTTTAATGTGGGTTTACATTCACAAAATGGTCAACATCCCGTTTCTTCTTCAAATTTAAAGAAGAAATCTCATACAGTCACAACCAATTCGACTGCAGAAACTGATCTTCCAAATCCTGGTATTGTCACTTCATCGTCAAGTGCACATTGAATTCAGAATATATCGTCCCATTACTTCATTTCCATAATAGGACATTTTCAACATTTTTGTGTTTTTACTGTTACTTTTGCATGAGGCTATTATGTCAGACATTAATACTGATAGA                                                                                                                                                                                                       ]
[+] EMBL CD133513             [                                                                                                                                                                                                                                                                                                                                                                                                                        CGCGACAATTCCTGATGATGACTCGAACGTTGAAGTCATATCAAACAATCATGGATGCATAAATTTGGGTCCAAAACGTCGTTTTACTGTTGGGTCTGATGTAGATGGTGCTTCAACTTTGATGTACCGAGCCACTCAACTGATTAAACGTTCTCGACGTAAATTTTTGTCGTTAGCTGAACTTCGTCGTTTCGGACGTCATCCTTGGTTTGATTTTAATGTGGGTTTACATTCACAAAATGGTCAACATCCCGTTTCTTCTTCAAATTTAAAGAAGAGATCTCATACAGTCACAACCAATTCGACTGCAGAAACTGATCTTCCAAATCCTGGTATTGTCACTTCATCGTCAAGTGCACATTGAATTCAGAATATATCGACCCATTACTTCATTTCCATAATAGGACATTTTCAACATTTTTGTGTTTTTACTGTTACTTTTGCATGAGGCTATTATGTCAGACATTAATACTGATAGAATCGTGAAACTTATTCAAATCTTATTCCAGTGTCGGCTTCACCATTC                                                                                                                                                        ]


>consensus_10146#0 CAGGCCATTATTTCGGCACGACGCACATTTTTAACTGATTTCCATAACGACACTCTCCCG TTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACANGCGGTTTCAAAATAT ATCTTCAGTAAACAAATGCAAATCCCCTGGAGTTTCTTTACATTCTTTGGTCTCACGATT GCATAAAACAAAATGTCGTTCATCCAATGGAGTAGAAACAGTCTTCACTGGTGAACCTTT ATCTATGACCACAGAAAACCCGAGATATGCCTCTTCAGATACTGCTCTCGACTTAGCTGT GAACGGTTCGGTCACTACATGTGATTCCGGAAGTCTCAAGGATCCCGGTTCTATGCCTAA CAGTGATGAGCATTCAGATGCCGACTGTATTTCTAATAAGAACCCTAACGCGACAATTCC TGATGATGACTCGAACGTTGAAGTCATATCAAACAATCATGGATGCATAAATTTGGGTCC AAAACGTCGTTTTACTGTTGGGTCTGATGTAGATGGTGCTTCAACTTTGATGTACCGAGC CACTCAACTGATTAAACGTTCTCGACGTAAATTTTTGTCGTTAGCTGAACTTCGTCGTTT CGGTCGTCATCCTTGGTTTGATTTTAATGTGGGTTTACATTCACAAAATGGTCAACATCC CGTTTCTTCTTCAAATTTAAAGAAGAAATCTCATACAGTCACAACCAATTCGACTGCAGA AACTGATCTTCCAAATCCTGGTATTGTCACTTCATCGTCAAGTGCACATTGAATTCAGAA TATATCGTCCCATTACTTCATTTCCATAATAGGACATTTTCAACATTTTTGTGTTTTTAC TGTTACTTTTGCATGAGGCTATTATGTCAGACATTAATACTGATAGAATTGTGAAACTTA TTTCAATCTTATTCCAGTATCGTCTTCACCATTCATTAGATTCGCCGGGGATTAAAAGTT AGTATTCATCATCTTATCACTTCATTGTTTGGTGATAGACCTGTGATATCTCTCCTTATG CTTCCTTGTCTAAGTATAAAAATGCTCATCTGATCCATTTTGATCTCCATTGCTATAGNA TTGATA



consensusID : consensus_10146#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 643
fasta sequence
                              [CACACGAGACGTTTGAATGGTTGACGAGCTCGGCGTCGAGGATTTGAAGTCACACACAACCGACGAGCGATTCGAAGAGTGACACTAGCGACAAAATGAAAGCTTACGCTGGTACGAACTTTAGATGCTAGCATATATGCATT-CGAATTATTAACTCCTAAGTCATTCGACTTTGTAGAGTGGTCAGTTGAAACAGTGGATGAGTTCTTACGAGCTTGGAGTTCAGTGATGGAAATATTAGTTTTCGAGACACCCATAGTTTTGGAATCTGAGCTGGAAGCGGATGTTAGATTGGAAGAAATTGGTTCGGAAACTTTATCTGGAAAACAAATACAATAAACCTACATCGTCAATATAAGACAGGTAATTAATTAATATTTGGGTGACCATACTGTCTTTCATTAGCTAAACAACAAAGTGGTCAAGCTCTAACATTATCAAATGAATATCTATATTTAGGAGTATTGTTTGGCAAACTGATACTTCAGACACATTTTTAACTGATTTCCATAACGACACTCTCCCGTTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACAG-CGGTTTCGAAATATATCTTCAGTAAACAAATGCAAATCC-CCC-GGAGTTTCTTTACATTCTTTGGTCTCGTGT]

[+] EMBL CD093728             [CACACGAGACGTTTGAATGGTTGACGAGCTCGGCGTCGAGGATTTGAGGTCACACACAACCGACGAGCGATTCGAAGAGTGACACTAGCGACAAAATGAAAGCTTACGCTGGCACGAACTTTAGATGCTAGCATATATGCATTGCGAATTATTAACTCCTAAGTCATTCGACTTTGTAGAGTGGTCAGTTGAAACAGTGGATGAGTTCTTACGAGCTTGGAGTTCAGTGATGGAAATATTAGGTTTCGAGACACCCATAGGTTTGGAATCTGAGCTGGAAGCGGATGTTAGATTGGAAGAAATTGGTTCGGAAACTTTATCTGGAAAACAAATACAATAAACCTACATCGTCAATATAAGACAGGTAATTAATTAATATTTGGGTGACCATACTGTCTTTCATTAGCTAAACAACAAAGTGGTCAAGCTCTAACATTATCAAATGAATATCTATATTTAGGAGTATTGTTTGGCAAACTGATACTTCAGACACATTTTTAACTGATTTCCATAACGACACTCTCCCGTTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACAG CGGTTTCGAAATATATCTTCAGTAAACAAATGCAAATCCNNCC GGAGTTTCTTTA                  ]
[+] EMBL CD093612             [ ACACGAGACGTTTGAATGGTTGACGAGCTCGGCGTCGAGGATTTGAAGTCACACACAACCGACGAGCGATTCGAAGAGTGACACTAGCGACAAAATGAAAGCTTACGCTGGTACGAACTTTAGATGCTAGCATATATGCATT CGAATTATTAACTCCTAAGTCATTCGACTTTGTAGAGTGGTCAGTTGAAACAGTGGATGAGTTCTTACGAGCTTGGAGTTCAGTGATGGAAATATTAGTTTTCGAGACACCCATAGTTTTGGAATCTGAGCTGGAAGCGGATGTTAGATTGGAAGAAATTGGTTCGGAAACTTTATCTGGAAAACAAATACAATAAACCTACATCGTCAATATAAGACAGGTCATTAATTAATATTTGGGTGACCATACTGTCTTTCATTAGCTAAACAACAAAGTGGTCAAGCTCTAACATTATCAAATGAATATCTATATTTAGGAGTATTGTTTGGCAAACTGATACTTCAGACACATTTTTAACTGATTTCCATAACGACACTCTCCCGTTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACAGCCGGTTTCGAAATATATCTTCAGTAAACAAATGCAAATCC CCCTGCAGTTTCTTT                   ]
[+] EMBL CD093721             [ ACACGAGACGTTTGAATGGTTGACGAGCTCGGCGTCGAGGATTTGAAGTCACACACAACCGACGAGCGATTCGAAGAGTGACACTAGCGACAAAATGAAAGCTTACGCTGGTACGAACTTTAGATGCTAGCATATATGCATT CGAATTATTAACTCCTAAGTCATTCGACTTTGTAGAGTGGTCAGTTGAAACAGTGGATGAGTTCTTACGAGCTTGGAGTTCAGTGATGGAAATATTAGTTTTCGAGACACCCATAGTTTTGGAATCTGAGCTGGAAGCGGATGTTAGATTGGAAGAAATTGGTTCGGAAACTTTATCTGGAAAACAAATACAATAAACCTACATCGTCAATATAAGACAGGTAATTAATTAATATTTGGGTGACCATACTGTCTTTCATTAGCTAAACAACAAAGTGGTCAAGCTCTAACATTATCAAATGAATATCTATATTTAGGAGTATTGTTTGGCAAACTGATACTTCAGACACATTTTTAACTGATTTCCATAACGACACTCTCCCGTTGTTGACCNAGCTTACTCCAGCTGAATCTCATAAACTTACACAG CGGTTTCGAAATATATCTTCAGTAAACAAATGCANATCC CCT GGAGTTTCTTT                   ]
[+] EMBL CD093676             [ ACACGAGACGTTTGAATGGTTGACGAGCTCGGCGTCGAGGATTTGAGGTCACACACAACCGACGAGCGATTCGAAGAGTGACACTAGCGACAAAATGAAAGCTTACGCTGGCACGAACTTTAGATGCTAGCATATATGCATT CGAATTATTAACTCCTAAGTCATTCGACTTTGTAGAGTGGTCAGTTGAAACAGTGGATGAGTTCTTACGAGCTTGGAGTTCAGTGATGGAAATATTAGTTTTCGAGACACCCATAGTTTTGGAATCTGAGCTGGAAGCGGATGTTAGATTGGAAGAAATTGGTTCGGAAACTTTATCTGGAAAACAAATACAATAAACCTACATCGTCAATATAAGACAGGTAATTAATTAATATTTGGGTGACCATACTGTCTTTCATTAGCTAAACAACAAAGTGGTCAAGCTCTAACATTATCAAATGAATATCTATATTTAGGAGTATTGTTTGGCAAACTGATACTTCAGACACATTTTTAACTGATTTCCATAACGACACTCTCCCGTTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACAG CGGTTTCGAAATATATCTTCAGTAAACAAATGCAAATCC CCC GGAGTTTCTTT                   ]
[-] EMBL CD093655             [                    TTGACGAGCTCGGCGTCGAGGATTTGAAGTCACACACAACCGACGAGCGATTCGAAGAGTGACACTAGCGACAAAATGAAAGCTTACGCTGGTACGAACTTTAGATGCTAGCATATATGCATT CGAATTATTAACTCCTAAGTCATTCGACTTTGTAGAGTGGTCAGTTGAAACAGTGGATGAGTTCTTACGAGCTTGGAGTTCAGTGATGGAAATATTAGTTTTCGAGACACCCATAGTTTTGGAATCTGAGCTGGAAGCGGATGTTAGATTGGAAGAAATTGGTTCGGAAACTTTATCTGGAAAACAAATACAATAAACCTACATCGTCAATATAAGACAGGTAATTAATTAATATTTGGGTGACCATACTGTCTTTCATTAGCTAAACAACAAAGTGGTCAAGCTCTAACATTATCAAATGAATATCTATATTTAGGAGTATTGTTTGGCAAACTGATACTTCAGACACATTTTTAACTGATTTCCATAACGACACTCTCCCGTTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACAG CGGTTTCGAAATATATCTTCAGTAAACAAATGCAAATCC CCT GGAGTTTCTTTACATTCTTTGGTCTCGTGT]
[-] EMBL CD093658             [                    TTGACGAGCTCGGCGTCGAGGATTTGAAGTCACACACAACCGACGAGCGATTCGAAGAGTGACACTAGCGACAAAATGAAAGCTTACGCTGGTACGAACTTTAGATGCTAGCATATATGCATT CGAATTATTAACTCCTAAGTCATTCGACTTTGTAGAGTGGTCAGTTGAAACAGTGGATGAGTTCTTACGAGCTTGGAGTTCAGTGATGGAAATATTAGTTTTCGAGACACCCATAGTTTTGGAATCTGAGCTGGAAGCGGATGTTAGATTGGAAGAAATTGGTTCGGAAACTTTATCTGGAAAACAAATACAATAAACCTACATCGTCAATATAAGACAGGTAATTAATTAATATTTGGGTGACCATACTGTCTTTCATTAGCTAAACAACAAAGTGGTCAAGCTCTAACATTATCAAATGAATATCTATATTTAGGAGTATTGTTTGGCAAACTGATACTTCAGACACATTTTTAACTGATTTCCATAACGACACTCTCCCGTTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACAG CGGTTTCGAAATATATCTTCAGTAAACAAATGCAAATCC CCT GGAGTTTCTTTA                  ]


>consensus_10146#1 CACACGAGACGTTTGAATGGTTGACGAGCTCGGCGTCGAGGATTTGAAGTCACACACAAC CGACGAGCGATTCGAAGAGTGACACTAGCGACAAAATGAAAGCTTACGCTGGTACGAACT TTAGATGCTAGCATATATGCATTCGAATTATTAACTCCTAAGTCATTCGACTTTGTAGAG TGGTCAGTTGAAACAGTGGATGAGTTCTTACGAGCTTGGAGTTCAGTGATGGAAATATTA GTTTTCGAGACACCCATAGTTTTGGAATCTGAGCTGGAAGCGGATGTTAGATTGGAAGAA ATTGGTTCGGAAACTTTATCTGGAAAACAAATACAATAAACCTACATCGTCAATATAAGA CAGGTAATTAATTAATATTTGGGTGACCATACTGTCTTTCATTAGCTAAACAACAAAGTG GTCAAGCTCTAACATTATCAAATGAATATCTATATTTAGGAGTATTGTTTGGCAAACTGA TACTTCAGACACATTTTTAACTGATTTCCATAACGACACTCTCCCGTTGTTGACTAAGCT TACTCCAGCTGAATCTCATAAACTTACACAGCGGTTTCGAAATATATCTTCAGTAAACAA ATGCAAATCCCCCGGAGTTTCTTTACATTCTTTGGTCTCGTGT



consensusID : consensus_10146#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 283
fasta sequence
                              [TCGTCAACCATTCAAACGTCTCACATTTTTAACTGATTCCATANACGACACTCTCCCGTTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACAGCGGTTTCGAAATATATCTTCAGTAAACAAATGCAAATCCCCTGGAGTTTCTTTACATTCTTTGGTCTCACGATTGCATAAAACAAAATGTCGTTCATCCAATGGAGTAGAAACAGTCTTCACTGGTGAACCTTTATCTATGACCACAGAAAACCCGAGATATGCCTCTTCAGATACTGCT]

[-] EMBL CD071377             [TCGTCAACCATTCAAACGTCTCACATTTTTAACTGATTCCATANACGACACTCTCCCGTTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACAGCGGTTTCGAAATATATCTTCAGTAAACAAATGCAAATCCCCTGGAGTTTCTTTACATTCTTTGGTCTCACGATTGCATAAAACAAAATGTCGTTCATCCAATGGAGTAGAAACAGTCTTCACTGGTGAACCTTTATCTATGACCACAGAAAACCCGAGATATGCCTCTTCAGATACTGCT]


>consensus_10146#2 TCGTCAACCATTCAAACGTCTCACATTTTTAACTGATTCCATANACGACACTCTCCCGTT GTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACAGCGGTTTCGAAATATATC TTCAGTAAACAAATGCAAATCCCCTGGAGTTTCTTTACATTCTTTGGTCTCACGATTGCA TAAAACAAAATGTCGTTCATCCAATGGAGTAGAAACAGTCTTCACTGGTGAACCTTTATC TATGACCACAGAAAACCCGAGATATGCCTCTTCAGATACTGCT



consensusID : consensus_10146#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 237
fasta sequence
                              [GCCCTAACCTTACATCAACTATGTGGTATGCTCTTGGCCCTTCTCATTCTCCTTTAAAAGTTTGCGTTGATTGTTGGAATTACTGGAAGCGATACGGAGACTTAAAATCCACATCACTTTTGGATAAAGTTTCCGAACCAATTTCTTCCAATCTAACATCCGCTTCCAGCTCAGATTCCAAAACTATGGGTGTCTCGAAAACTAATATTTCCATCACTGAACTCCAAGCTCGTAAGA]

[+] EMBL CD182059             [GCCCTAACCTTACATCAACTATGTGGTATGCTCTTGGCCCTTCTCATTCTCCTTTAAAAGTTTGCGTTGATTGTTGGAATTACTGGAAGCGATACGGAGACTTAAAATCCACATCACTTTTGGATAAAGTTTCCGAACCAATTTCTTCCAATCTAACATCCGCTTCCAGCTCAGATTCCAAAACTATGGGTGTCTCGAAAACTAATATTTCCATCACTGAACTCCAAGCTCGTAAGA]


>consensus_10146#3 GCCCTAACCTTACATCAACTATGTGGTATGCTCTTGGCCCTTCTCATTCTCCTTTAAAAG TTTGCGTTGATTGTTGGAATTACTGGAAGCGATACGGAGACTTAAAATCCACATCACTTT TGGATAAAGTTTCCGAACCAATTTCTTCCAATCTAACATCCGCTTCCAGCTCAGATTCCA AAACTATGGGTGTCTCGAAAACTAATATTTCCATCACTGAACTCCAAGCTCGTAAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10146#0      CAGGCCATTATTTCGGCACGACGCACATTTTTAACTGATTTCCATAACGACACTCTCCCG 60
consensus_10146#2      TCGTCAACCATTC--AAACGTCTCACATTTTTAACTGATTCCATANACGACACTCTCCCG 58
consensus_10146#1      ------------------CACACGAGACGTTTGAATGGTTGACGAGCTCGGCGTCGAGGA 42
consensus_10146#3      --------------------GCCCTAACCTTACATCAACTATGTGGTATGCTCTTGGCCC 40
                                                 *  **  *     *             *      

consensus_10146#0      TTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACANGCGGTTTCAAAATAT 120
consensus_10146#2      TTGTTGACTAAGCTTACTCCAGCTGAATCTCATAAACTTACACAG-CGGTTTCGAAATAT 117
consensus_10146#1      TTTGAAGTCACACACAACCGACGAGCGATTCGAAGAGTGACACTAGCGA---CAAAATGA 99
consensus_10146#3      TTCTCATTCTCCTTTAA---AAGTTTGCGTTGATTGTTGGAATTACTGGAAGCGATACGG 97
                       **             *    *        *       *   *     *    * * *   

consensus_10146#0      ATCTTCAGTAAACAAATGCAAATCCCCTGGAGTTTCTTTACATTCTTTGGTCTCACGATT 180
consensus_10146#2      ATCTTCAGTAAACAAATGCAAATCCCCTGGAGTTTCTTTACATTCTTTGGTCTCACGATT 177
consensus_10146#1      AAGCT---TACGCTGGTACGAA-CTTTAGATGCTAGCATATATGCATTCGAATTATTAAC 155
consensus_10146#3      AGACT---TAAA---ATCCACATCACTTTTGGATAAAGTTTCCGAACCAATTTCTTCCAA 151
                       *   *   **      * *  * *       * *    *             *       

consensus_10146#0      GCATAAAACAAAATGTCGTTCATCCAATGG--AGTAGAAACAGTCTTCACTGGTGA-ACC 237
consensus_10146#2      GCATAAAACAAAATGTCGTTCATCCAATGG--AGTAGAAACAGTCTTCACTGGTGA-ACC 234
consensus_10146#1      TCCTAAGTCA--TTCGACTTTGTAGAGTGGTCAGTTGAAACAGT------GGATGA-GTT 206
consensus_10146#3      TCTAACATCCGCTTCCAGCTCAGATTCCAA--AACTATGGGTGTCTCGAAAACTAATATT 209
                        *  *   *    *     *            *         **         * *    

consensus_10146#0      TTTAT---CTATGACCACAGAAAACCCGAGATATGCCTCTTCAGATACTGCTCTCGACTT 294
consensus_10146#2      TTTAT---CTATGACCACAGAAAACCCGAGATATGCCTCTTCAGATACTGCT-------- 283
consensus_10146#1      CTTACGAGCTTGGAGTTCAGTGA--TGGAAATATTAGTTTTC-GAGACACCCATAGTTTT 263
consensus_10146#3      TCCAT---CACTGAACTCCAAGCTCGTAAGA----------------------------- 237
                          *    *   **   *          * *                             

consensus_10146#0      AGCTGTGAACGGTTCGGTCACTACATGTGATTCCGGAAGTCTCAAGGATCCCGGTTCTAT 354
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      GG----AATCTGAGCTGGAAGCGGATGTTAGATTGGAAGA--AATTGGTTCGGAAACTTT 317
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      GCCTAACAGTGATGAGCATTCAGATGCCGACTGTATTTCTAATAAGAACCCTAACGCGAC 414
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      ATCTGGAAAACAAATACAATAAACCTACATCGTCAATATAAGACAGGTAATTAATTAATA 377
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      AATTCCTGATGATGAC-TCGAACGTTGAAGTCATATCAAA-CAATCATGGATGCATAAAT 472
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      TTTGGGTGACCATACTGTCTTTCATTAGCTAAACAACAAAGTGGTCAAGCTCTAACATTA 437
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      TTGGGTCCAAAACGTCGTTTTACTGTTGGGTCTGATGTAGATGGTGCTTCAACTTTGATG 532
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      TCAAATGAATATCTATATTTAGGAGTATTGTTTGGCA-AACTGATACTTCAGACACATTT 496
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      TACCGAGCCACTCAACTGATTAAACGTTCTCGACGTAAATTTTTGTCGTT--AGCTGAAC 590
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      T--TAACTGATTTCCATAACGACACTCTCCCGTTGTTGACTAAGCTTACTCCAGCTGAAT 554
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      TTCGTCGTTTCGGTCGTCATCCTTGGTTTGATTTTAATGTGGGTTTACATTCACAAAATG 650
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      CTCATAAACTTACACAGCGGTTTCGA----AATATATCTTCAGTAAACAAATGCAAATCC 610
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      GTCAACATCCCGTTTCTTCTTCAAATTTAAAGAAGAAATCTCATACAGTCACAACCAATT 710
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      CCCGGAGTTTCTTTACATTCTTTGGTCTCGTGT--------------------------- 643
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      CGACTGCAGAAACTGATCTTCCAAATCCTGGTATTGTCACTTCATCGTCAAGTGCACATT 770
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      GAATTCAGAATATATCGTCCCATTACTTCATTTCCATAATAGGACATTTTCAACATTTTT 830
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      GTGTTTTTACTGTTACTTTTGCATGAGGCTATTATGTCAGACATTAATACTGATAGAATT 890
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      GTGAAACTTATTTCAATCTTATTCCAGTATCGTCTTCACCATTCATTAGATTCGCCGGGG 950
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      ATTAAAAGTTAGTATTCATCATCTTATCACTTCATTGTTTGGTGATAGACCTGTGATATC 1010
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      TCTCCTTATGCTTCCTTGTCTAAGTATAAAAATGCTCATCTGATCCATTTTGATCTCCAT 1070
consensus_10146#2      ------------------------------------------------------------
consensus_10146#1      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
                                                                                   

consensus_10146#0      TGCTATAGNATTGATA 1086
consensus_10146#2      ----------------
consensus_10146#1      ----------------
consensus_10146#3      ----------------
                                       




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)