These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10158#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1648 fasta sequence [AAGTTTAGATAAGCGTCGATCAGCCGGAGCATAAACATTAAGAATATAATCGGTGAGCATAGGTGTCAGATTTGGATTGTTCGTTAAAATTGCTAGAAGCATATCGTTGAATAGTTCCAACTGGGTAACGGTAGGTCCTTCGTTCCTTGGAGATCGATGGTACGGAACCGAAGTGGTCAAATACTTGTATTCAAGATCATCCGAACTTAGTTCAGATCGTCCAATCAAATGACCAGAAGCTGAGTGTGTTAAAGTGGTAGGTATTGAAGGGAATTCAAATTGGGATGATGTAGGACTAGTTACTGCTGAACGAGCTTCTCGACTACGGACAAACGAGTTTATTGGGACTTCTGCTTGATGACGCCCACGACGAAGAAAAGCCCTGAAAGTCCCGGTGTTCTCAGTTTTCGAAGGTCCTTCCGATTTTCTTCCGGCCCATTTTCGAAGACGAGCAATGGCAATAGCTCGAGCAGACATAATTGCGGGACAGTGAATTGTATGATCATCTTTATCGGAAAAATTGTTTACGTCATGTTTATTATTTGAAGAAATGGATGCAATGTGGACAGGATTACTTTGATCTGACTGATAAGTTGTTCCTGAAGTATCCTTTGAAAATGTACTCAGCTTTCGCAAACGTCTTTTTATTGCAACTGTTGCAGATGACGTTGCAGCAACCGCTGCTTGAGCTGCCGACTGCGCACGTAAAATGAACGGTGGAGCTTCTTTTTGAACAGAATTCGGTGGCGATCCCATATTTTCAAATACTAGGTTTCGCCCAAATGTGGACGCTTCATCATAGTCTTTTACCAACAGAGAATTTGACAGTAACTGGATATGACTATCTGGTGGTATACTTAAACGTCTCCGACGCTCCAGACGGCGATGCAATTCATTCAAGCGTGCAATAAAAATATCTTTCTGTTCCTGTTCAAAATCCAGTTCTTCTCTATATGCTAACTCTTGAACAAGGATAGCAGAGTATTCTCGTACACAAGATTCTAGCTCTTCTAATAATGCATTGAGTTCATTCAGAGAAAGATCTTGCATAGCTTCTTCAGGAAGCCAATCACTTCCGATATTTTCTATCCCAAGTGGACGTTTATACTCCGACTGAACCATATTGCACAGTGACAAAGGGATATCCTCATTATCATTCATAAGGATATCAATTTCCTTAATGATTTCGTCGGCGGTTTGGACGATGTCATCGTATGAATCAGGCAACTGAGATGTTACTAACGAATGGTGGTCGAATGCATAACTAATGGCTTCATCTTCAGGTATATCTAGGTCGTAACATTCAACTGGTTGTTCCTGTTCCTTGATATCCAAAGCTTCTAAAACAACTCCATACAAACACGTCCCAAACCAATGTACTGGTGGAAATGTGTAATGACTGAGTAGTGGACCCAAATATTCTCTGGAATCAAACGATTGCGTCTTATCCTTAAGTTTAACCTGATCGTTTAAATCTTTGAAAACACCATCAAACGTGAAGCACCTTGCGATTTCCTCACTGAAAGCTGTAGTTAAATCATTGGTCATGTTGCGGTCTCCGGAGACTAAATAATGTGTTTTCTCAATATTTCACTGCTGCGTGTCGTTTTGGCACATAGCCCGGAAAAAACAAATGGTAGGGAAACAT] [-] EMBL CD202169 [AAGTTTAGATAAGCGTCGATCAGCCGGAGCATAAACATTAAGAATATAATCGGTGAGCATAGGTGTCAGATTTGGATTGTTCGTTANAATTGCTAGAAGCATATCGTTGAATAGTTCCAACTGGGTAACGGTAGGTCCTTCGTTCCTTGGAGATCGATGGTACGGAACCGAAGTGGTCAAATACTTGTATTCAAGATCATCCGAACTTAGTTCAGATCGTCCAATCAAATGACCAGAAGCTGAGTGTGTTAAAGTGGTAGGTATTGAAGGGAATTCAAATTGGGATGATGTAGGACTAGTTACTGCTGAACGAGCTTCTCGACTACGGACAAACGAGTTTATTGGGACTTCTGCTTGATGACGCCCACGACGAAGAAAAGCCCTGAAAGTCCCGGTGTTCTCAGTTTTCGAAGG ] [+] EMBL CD184700 [ TAAGAATATAATCGGTGAGCATAGGTGTCAGATTTGGATTGTTCGTTAAAATTGCTAGAAGCATATCGTTGAATAGTTCCAACTGGGTAACGGTAGGTCCTTCGTTCCTTGGAGATCGATGGTACGGAACCGAAGTGGTCAAATACTTGTATTCAAGATCATCCGAACTTAGTTCAGATCGTCCAATCAAATGACCAGAAGCTGAGTGTGTTAAAGTGGTAGGTATTGAAGGGAATTCAAATTGGGATGATGTAGGACTAGTTACTGCTGAACGAGCTTCTCGACTACGGACAAACGAGTTTATTGGGACTTCTGCTTGATGACGCCCACGACGAAGAAAAGCCCTGAAAGTCCCGGTGTTCTCAGTTTTCGAAGGTCCTTCCGATTTTCTTCCGGCCCATTTTCGAAGACGAGCAATGGCAATAGCTCGAGCAGACATAATTGCGGGACAGTGAATTGTATGATC ] [+] EMBL CD184883 [ TAAGAATATAATCGGTGAGCATAGGTGTCAGATTTGGATTGTTCGTTAAAATTGCTAGAAGCATATCGTTGAATAGTTCCAACTGGGTAACGGTAGGTCCTTCGTTCCTTGGAGATCGATGGTACGGAACCGAAGTGGTCAAATACTTGTATTCAAGATCATCCGAACTTAGTTCAGATCGTCCAATCAAATGACCAGAAGCTGAGTGTGTTAAAGTGGTAGGTATTGAAGGGAATTCAAATTGGGATGATGTTGGACTAGTTACTGCTGAACGAGCTTCTCGACTACGGACAAACGAGTTTATTGGGACTTCTGCTTGATGACGCCCACGACGAAGAAAAGCCCTGAAAGTCCCGGTGTTCTCAGTTTTCGAAGGTCCTTCCGATTTTCTTCCGGCCCATTTTCGAAGACGAGCAATGGCAATAGCTCGAGCAGACATA ] [+] EMBL CD195198 [ TGGTAGGTATTGAAGGGAATTCAAATTGGGATGATGTAGGACTAGTTACTGCTGAACGAGCTTCTCGACTACGGACAAACGAGTTTATTGGGACTTCTGCTTGATGACGCCCACGACGAAGAAAAGCCCTGAAAGTCCCGGTGTTCTCAGTTTTCGAAGGTCCTTCCGACTTTCTTCCGGCCCATTTTCGAAGACGAGCAATGGCAATAGCTCGAGCAGACATAATTGCGGGACAGTGAATTGTATGATCATCTTTATCGGAAAAATTGTTTACGTCATGTTTATTATTTGAAGAAATGGATGCAATGTGGACAGGATTACTTTGATCTGACTGATAAGTTGTTCCTGAAGTATCCT ] [-] EMBL BG932600 [ ATGTAGGACTAGTTACTGCTGAACGAGCTTCTCGACTACGGACAAACGAGTTTATTGGGACTTCTGCTTGATGACGCCCACGACGAAGAAAAGCCCTGAAAGTCCCGGTGTTCTCAGTTTTCGAAGGTCCTTCCGATTTTCTTCCGGCCCATTTTCGAAGACGAGCAATGGCAATAGCTCGAGCAGACATAATTGCGGGACAGTGAATTGTATGATCATCTTTATCGGAAAAATTGTTTACGTCATATTTATTATTTGAAGAAATGGATGCAATGTGGACAGGATTACTTTGATCTGACTGATAAGTTGTTCCTGAAGTATCCTTTGAAAATGTACTCAGCTTTCGCAAACGTCTTTTTATTGCAACTGTTGCAGATGACGTTGCAGCAACCGCTGCTTGAGCTGCCGACTGCGCACGTAAAATGAACGGTGGAGCTTCT ] [+] EMBL CD066689 [ TCTGACTGATAAGTTGTTCCTGAACTATCCTTTGAAAATGTACTCAGCTTTCACAAACGTCTTTTTATTGCAACTGTTGCAGATGACTTTGCAACAGCCGCTGCTTGAGCTGCCGACTGCGCACGTAAAATGAACGGCGGAGCTTCTTTTTGAACAGAATTCGGTGGCGATCCCATATTTTCAAATACTAGGTTTCGCCCAAATGTGGACGCT ] [+] EMBL CD094550 [ TGAACGGTGGAGCTTCTTTTTGAACAGAATTCGGTGGCGATCCCATATTTTCAAATACTAGGTTTCGCCCAAATGTGGACGCTTCATCATAGTCTTTTACCAACAGAGAATTTGACAGTAACTGGATATGACTATCTGGTGGTATACTTAAACGTCTCCGACGCTCCAGACGGCGGTGCAATTCATTCAAGCGTGCAATAAAAATATCTATCTGTTCCTGTTCAAAATCCAGTTCTTCTCTATATGCTAACTCTTGAACAAGGATAGCAGAGTATTCTCGTACACAAGATTCTAGCTCTTCTAATAATGCATTGAGTTCATTCAGAGAAAGATCTTGCATAGCTTCTTCAGGAAGCCAATCACTTCCGATATTTTCTATCCCAAGTGGACGTTTATACTCCGACTGAACCATATTGCACAGTGACAAAGGGATATCCTCATTATCATTCATAAGGTTATCAATTTCCTTAATGATTTCGTCGGCGGTTTGGACGATGTCATCGTATGAATCAGGCAACTGAGATGTTACTAACGAATGGTGGTCGAATGCATAACTAATGGCTTCATCTTCAGGTATATCTAGGTCGTAACATTCAACTGGTTGTTCCTG ] [+] EMBL CD094737 [ TGAACGGTGGAGCTTCTTTTTGAACAGAATTCGGTGGCGATCCCATATTTTCGAATACTAGGTTTCGCCCAAATGTGGACGCTTCATCATAGTCTTTTACCAACAGAGAATTTGACAGTAACTGGATATGACTATCTGGTGGTATACTTAAACGTCTCCGACGCTCCAGACGGCGATGCAATTCATTCAAGCGTGCAATAAAAATATCTTTCTGTTCCTGTTCAAAATCCAGTTCTTCTCTATATGCTAACTCTTGAACAAGGATAGCAGAGTATTCTCGTACACAAGATTCTAGCTCTTCTAATAATGCATTGAGTTCATTCAGAGAAAGATCTTGCATAGCTTCTTCAGGAAGCCAATCACTTCCGATATTTTCTATCCCAAGTGGACGTTTATACTCCGACTGAACCATATTGCACAGTGACAAAGGGATATCCTCATTATCATTCATAAGGATATCAATTTCCTTAATGATTTCGTCGGCGGTTTGGACGATGTCATCGTATGAATCAGGCAACTGAGATGTTACTAACGAATGGTGGTCGAATGCATAACTAATGG ] [+] EMBL CD094491 [ TGAACGGTGGAGCTTCTTTTTGAACAGAATTCGGTGGCGATCCCATATTTTCAAATACTAGGTTTCGCCCAAATGTGGACGCTTCATCATAGTCTTTTACCAACAGAGAATTTGACAGTAACTGGATATGACTATCTGGTGGTATACTTAAACGTCTCCGACGCTCCAGACGGCGATGCAATTCATTCAAGCGTGCAATAAAAATATCTTTCTGTTCCTGTTCAAAATCCAGTTCTTCTCTATATGCTAACTCTTGAACAAGGATAGCAGAGTATTCTCGTACACAAGATTCTAGCTCTTCTAATAATGCATTGAGTTCATTCAGAGAAAGATCTTGCATAGCTTCTTCAGGAAGCCAATCACTTCCGATATTTTCTATCCCAAGTGGACGTTTATACTCCGACTGAACCATATTGCACAGTGACAAAGGGATATCCTCATTATCATTCATAAGGATATCAATTTCCTTAATGATTTCGTCGGCGGTTTGGACGATGTCAT ] [-] EMBL CD095345 [ GCGATGCAATTCATTCAAGCGTGCAATAAAAATATCTNTCTGTTCCTGTTCAAAATCCAGTTCTTCTCTATATGCTAACTCTTGAACAAGGATAGCAGAGTATTCTCGTACACAAGATTCTAGCTCTTCTAATAATGCATTGAGTTCATTCAGAGAAAGATCTTGCATAGCTTCTTCAGGAAGCCAATCACTTCCGATATTTTCTATCCCAAGTGGACGTTTATACTCCGACTGAACCATATTGCACAGTGACAAAGGGATATCCTCATTATCATTCATAAGGATATCAATTTCCTTAATGATTTCGTCGGCGGTTTGGACGATGTCATCGTATGAATCAGGCAACTGAGATGTTACTAACGAATGGTGGTCGAATGCATAACTAATGGCTTCATCTTCAGGTATATCTAGGTCGTAACATTCAACTGGTTGTTCCTGT ] [-] EMBL CD129932 [ TCAGGCAACTGAGATGTTACTAACGAATGGTGGTCGAATGCATAACTAATGGCTTCATCTTCAGGTATATCTAGGTCGTAACATTCAACTGGTTGTTCCTGTTCCTTGATATCCAAAGCTTCTAAAACAACTCCATACAAACACGTCCCAAACCAATGTACTGGTGGAAATGTGTAATGACTGAGTAGTGGACCCAAATATTCTCTGGAATCAAACGATTGCGTCTTATCCTTAAGTTTAACCTGATCGTTTAAATCTTTGAAAACACCATCAAACGTGAAGCACCTTGCGATTTCCTCACTGAAAGCTGTAGTTAAATCATTGGTCATGTTGCGGTCTCCGGAGACTAAATAATGTGTTTTCTCAATATTTCACTGCTGCGTGTCGTTTTGGCACATAGCCCGGAAAAAACAAATGGTAGGGAAACAT] [-] EMBL CD130279 [ TCGAATGCATAACTAATGGCTTCATCTTCAGGTATATCTAGGTCGTAACATTCAACTGGTTGTTCCTGTTCCTTGATATCCAAAGCTTCTAAAACAACTCCATACAAACACGTCCCAAACCAATGTACTGGTGGAAATGTGTAATGACTGAGTAGTGGACCCAAATATTCTCTGGAATCAAACGATTGCGTCTTATCCTTAAGTTTAACCTGATCGTTTAAATCTTTGAAAACACCATCAAACGTGAAGCACCTTGCGATTTCCTCACTGAAAGCTGTA ] [-] EMBL CD130311 [ TTCAGGTATATCTAGGTCGTAACATTCAACTGGTTGTTCCTGTTCCTTGATATCCAAAGCTTCTAAAACAACTCCATACAAACACGTCCCAAACCAATGTACTGGTGGAAATGTGTAATGACTGAGTAGTGGACCCAAATATTCTCTGGAATCAAACGATTGCGTCTTATCCTTAAGTTTAACCTGATCGTTTAAATCTTTGAAAACACCATCAAACGTGAAGCACCTTGCGATTTCCTCACTGAAAGCTGTAGTTAAATCATTGGTCATGTTGCGGTCTCCGGAGACTAAATAATGTGTTTTCTCAATATTTCACTGCTGCGTGTCGTTTAGTCAGAACTCCCG ACAATCGAATntccgc ] [+] EMBL CD068177 [ GGTATATCTAGGTCGTAACATTGAACTGGTTGTTCCTGTTCCTTGATATCCAAAGCTTCTAAAACAACTCCATACAAACACGTCCCAAACCAATGTACTGGTGGAAATGTGTAATGACTGAGTAGTGGACCCAAATATTCTCTGGAATCAAACGATTGCGTCTTATCCTTAAGTTTAACCTGATCGTTTAAATCTTTGAAAACACCATCAAACGTGAAGCACCTTGCGATTTCCTCACTGAAAGCTGTAGTTAAATCATTGGTCATGTTGCGGTCTCCGGAGACT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||