cluster # 10211

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Schistosoma mansoni
cluster # 10211 cluster # 10211 Sequences # 14 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10211#0 length = 976 sequences # 8
consensus_10211#1 length = 631 sequences # 1

consensus_10211#2 length = 568 sequences # 3
consensus_10211#3 length = 276 sequences # 1
consensus_10211#4 length = 204 sequences # 1

consensusID : consensus_10211#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 976
fasta sequence

                              [TTAGTTTCGTCACTGAAGTAATTTATTTATA-CAAATAATAATGGGAAGAGATAAATCA-CAAATAATTGGTCCAAATGGTGAAACTTATCATCCTACATTAAAAATTGATTTA-CATAATGATCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAATGAAAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTATCAA-CGAATGGAAATA-CGAGATA-CTTTTAAAG-CAATGTATGGAAAGGATTTAATAGATGAATTGTG-CAGTGAAACAAGCGGTGATTTTAGAAGACTA-CTTAAAATGCTTTTAA-CTGATATAGATAAAGTTGATG-CA-CGTGCATTATA-CAAAGCAATGAAAGGTGGAGGAACTGATGAAGAAACAATTATTGAAGTTTTATGTA-CAGCAACTAATATTGAAATTGAAAATATTAAACAAGCTTATCTATCTGTTTTAAGGGATTATGGAATCAGTGATCCCAGTAGAACATTAGAAATTGATGTACAAAGTGATTTGGGCGGCTACTTACAACAGCTAGTCGTTGCATTGCTTCAAGCTAAACGTGATGAAATTCCATTTGAAGATGTTGAAAAAATTAGTAAAAAAGGATTGAAAAGTGTAGTTGATATGAGTCAAGTTGAACAAGATGTTGAAATATTATGGGATGCTGGTGAAGCGCATCTAGGAACTGATGAAGATGCTATCATTAAGATTGTATGCGGTCGAAGTGTTTGGCATTTACAAGAGGTTTCTCATCTGTTTGAAAAGAAATATGGTAAAACATTGGTTGATTCATTGGCATCTGAGACATCTGGAGATTNTGAAAGTGCTCTATTATTAATCCTAAATACTTGTTTAAATCGTCCGAAAGCTTATTCCGATTTATTGGTGAAAGCAATGAAAGGTGCCGGTACCGATGATTGTACCCTAATGCGTATTATTGTAACAAGATGTGAGTTT]

[+] EMBL CD112880             [TTAGTTTCGTCACTGAAGTAATTTATTTATA CAAATAATAATGGGAAGAGATAAATCA CAAATAATTGGTCCAAATGGTGAAACTTATCATCCTACATTAAAAATTGATTTA CATAATGATCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAATGAAAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTATCAA CGAATGGAAATA CGAGATA CTTTTAAAG CAATGTATGGAAAGGATTTAATAGATGAATTGTG CAGTGAAACAAGCGGTGATTTTAGAAGACTA CTTAAAATGCTTTTAA CTGATATAGATAAAGTTGATG CA CGTGCATTATA CAAAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD112907             [TTAGTTTCGTCACTGAAGTAATTTATTTATA CAAATAATAATGGGAAGAGATAAATCA CAAATAATTGGTCCAAATGGTGAAACTTATCATCCTACATTAAAAATTGATTTA CATAACGATCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAATGAAAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTATCAA CGAATGGAAATA CGAGATA CTTTTAAAG CAATGTATGGAAAGGATTTAATAGATGAATTGTG CAGTGAAACAAGCGGTGATTTTAGAAGACTA CTTAAAATGCTTTTAA CTGATATAGATAAAGTTGATG CA CGTGCATTATA CAAAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD154132             [    TTTCGTCACTGAAGTAATTTATTTATA CAAATAATAATGGGAAGAGATAAATCA CAAATAATTGGTCCAAATGGTGAAACTTATCATCCTACATTAAAAATTGATTTA CATAATGATCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAATGAAAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTATCAA CGAATGGAAATA CGAGATA CTTTTAAAG CAATGTATGGAAAGGATTTAATAGATGAATTGTG CAGTGAAACAAGCGGTGATTTTAGAAGACTA CTTAAAATGCTTTTAA CTGATATAGATAAAGTTGATG CA CGTGCATTATA CAAAGCAATGAAAGGTGGAGGAACTGATGAAGAAACAATTATTGAAGTTTTATGTA CAGCAACTAATATTGAAATTGAAAATATTAAACAAGCTTATCTATCTGTTTTAAGGGATTATGGAATCAGTGATCCCAGTAGAACATTAGAAATTGATGTACAAAGTGATTTGGGCGGCTACTTACAACAGCTAGTCGTTGCATTG                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AW017036             [            CTGAAGTAATTTATTTATA CAAATAATAATGGGAAGAGATAAATCA CAAATAATTGGTCCAAATGGTGAAACTTATCATCCTACATTAAAAATTGATTTA CATAATGATCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAATGAAAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTATCAA CGAATGGAAATA CGAGATA CTTTTAAAG CAATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BF936181             [             TGAAGTAATTTATTTATACCAAATAATAATGGGAAGAGATAAATCACCAAATAATTGGTCCAAATGGTGAAACTTATCATCCTACATTAAAAATTGATTTACCATAATGATCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAATGAAAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTATCAACCGAATGGAAATACCGAGATACCTTTTAAAGCCAATGTATGGAAAGGATTTAATAGATGAATTGTGCCAGTGAAACAAGCGGTGATTTTAGAAGACTACCTTAAAATGCTTTTAACCTGATATAGATAAAGTTGATGCCACCGTGCCTTATACCAAAGCAATGAAAGGTGGAGGAACTGATGAAGAAACAATTATTGAAGTTTTATGTACCAGCAACTAATATTGAAATTGAAAATATTAAACAAGCTTATCTATCTGTTTTAAGGGATTATGGAATCAGTGATCCCAGTAGAACATTAGAAATTGATGTACAAAGTGATTTGGGCGGCTACTTACCACAGCTAGTCGTTGCATTGCTTCAAGCCTAACGTGATGAAATTCCATTT                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD080554             [                                                                                                                                                                                                                                                       TTTAAAG CAATGTATGGAAAGGATTTAATAGATGAATTGTG CAGTGAAACAAGCGGTGATTTTAGAAGACTA CTTAAAATGCTTTTAA CTGATATAGATAAAGTTGATG CA CGTGCATTATA CAAAGCAATGAAAGGTGGAGGTACTGATGAAGAAACAATTATTGAAGTTTTATGTA CAGCAACTAATATTGAAATTGAAAATATTAAACAAGCTTATCTATCTGTTTTAAGGGATTATGGAATCAGTGATCCCAGTAGAACATTAGAAATTGATGTACAAAGTGATTTGGGCGGCTACTTACAACAGCTAGTCGTTGCATTGCTTCAAGCTAAACGTGATGAAATTCCATTTGAAGATGTTGAAAAAATTAGTAAAAAAGGATTGAAAAGTGTAGTTGATATGAGTCAAGTTGAACAAGATGTTGAAATATTATGGGATGCTGGTGAAGCGCATCTAGGAACTGATGAAGATGCTATCATTAAGATTGTATGCGGTCGAAGTGTTTGGCATTTACAAGAGGTTTCTCATCTGTTTGAAAAGAAATATGGTAAAACATTGGTTGATTCATTGGCATCTGAGACATCTGGAGATTNTGAAAGTGCTCTATTATTAATCCTAAATACTTGTTTAA                                                                                                     ]
[+] EMBL CD092476             [                                                                                                                                                                                                                                                                                                                                                                    GATG CA CGTGCATTATA CAAAGCAATGAAAGGTGGAGGAACTGATGAAGAAACAATTATTGAAGTTTTATGTA CAGCAACTAATATTGAAATTGAAAATATTAAACAAGCTTATCTATCTGTTTTAAGGGATTATGGAGTCAGCGATCCCAGTAGAACATTAGAAATTGATGTACGAAGTGATTTGGGCGGCTACTTACAACAGCTAGTCGTTGCATTGCTTCAAGCTAAACGTGATGAAATTCCCTTTGAAGATGTTG AAAAATTAGTAAAAAAGGATTGAAna                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD168626             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTGTAGTTGATATGAGTCAAGTTGAACAAGATGTTGAAATATTATGGGATGCTGGTGAAGCGCATCTAGGAACTGATGAAGATGCTATCATTAGGATTGTATGCGGTCGAAGTGTTTGGCATTTACAAGAGGTTTCTCATCTGTTTGAAAAGAAATATGGTAAAACATTGGTTGATTCATTGGCATCTGAGACATCTGGAGATTTTGAAAGTGCTCTATTATTAATCCTAAATACTTGTTTAAATCGTCCGAAAGCTTATTCCGATTTATTGGTGAAAGCAATGAAAGGTGCCGGTACCGATGATTGTACCCTAATGCGTATTATTGTAACAAGATGTGAGTTT]




>consensus_10211#0
TTAGTTTCGTCACTGAAGTAATTTATTTATACAAATAATAATGGGAAGAGATAAATCACA
AATAATTGGTCCAAATGGTGAAACTTATCATCCTACATTAAAAATTGATTTACATAATGA
TCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAATGAAAGGATGGGGAACTGATGAGCA
TCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTATCAACGAATGGAAATACGAGATAC
TTTTAAAGCAATGTATGGAAAGGATTTAATAGATGAATTGTGCAGTGAAACAAGCGGTGA
TTTTAGAAGACTACTTAAAATGCTTTTAACTGATATAGATAAAGTTGATGCACGTGCATT
ATACAAAGCAATGAAAGGTGGAGGAACTGATGAAGAAACAATTATTGAAGTTTTATGTAC
AGCAACTAATATTGAAATTGAAAATATTAAACAAGCTTATCTATCTGTTTTAAGGGATTA
TGGAATCAGTGATCCCAGTAGAACATTAGAAATTGATGTACAAAGTGATTTGGGCGGCTA
CTTACAACAGCTAGTCGTTGCATTGCTTCAAGCTAAACGTGATGAAATTCCATTTGAAGA
TGTTGAAAAAATTAGTAAAAAAGGATTGAAAAGTGTAGTTGATATGAGTCAAGTTGAACA
AGATGTTGAAATATTATGGGATGCTGGTGAAGCGCATCTAGGAACTGATGAAGATGCTAT
CATTAAGATTGTATGCGGTCGAAGTGTTTGGCATTTACAAGAGGTTTCTCATCTGTTTGA
AAAGAAATATGGTAAAACATTGGTTGATTCATTGGCATCTGAGACATCTGGAGATTNTGA
AAGTGCTCTATTATTAATCCTAAATACTTGTTTAAATCGTCCGAAAGCTTATTCCGATTT
ATTGGTGAAAGCAATGAAAGGTGCCGGTACCGATGATTGTACCCTAATGCGTATTATTGT
AACAAGATGTGAGTTT

consensusID : consensus_10211#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 631
fasta sequence

                              [GCCAANAATTTGGCACGAGGTGGTGAAGCGCATACTAGGAACTGATGAAGATGCTATCATTAGGATTGTATGCGGTCGAAGTGTTTGGCATTTACAAGAGGTTTCTCATCTGTTTGAAAAGAAATATGGTAAAACATTGGTTGATTCATTGGCATCTGAGACATCTGGAGATTTTGAAAGTGCTCTATTATTAATCCTAAATACTTGTTTAAATCGTCCGAAAGCTTATTCCGATTTATTGGTGAAAGCAATGAAAGGTGCCGGTACCGATGATTGTACCCTAATGCGTATTATTGTAACAAGATGTGAGTTTGATTTAGGAAGTATTTGTATAGAATTTCAAAAAAGTCAGGGAAGTACACTTGAAGATTGGATACGTAATGAAACATCTGGTGATTATCAACGACTTCTATTAGCATTAATTGGTGCTGAATGGCAATAAAGAAGAATCAGAAGAGGAACATTTTGTCAAAAAGACGAAAAAAAGAAACCCAATTCAACATAACAAAGTTCACTGTTTAAAGAAATGATTTCCGTCTCTTAATTAATTCATTAAAAGTTATTTATTTTATCATCTAACAATCACCCTTCTTCATCAGTATTTCATTAACAATACTTTTAAATATAAAAC]

[+] EMBL CD079515             [GCCAANAATTTGGCACGAGGTGGTGAAGCGCATACTAGGAACTGATGAAGATGCTATCATTAGGATTGTATGCGGTCGAAGTGTTTGGCATTTACAAGAGGTTTCTCATCTGTTTGAAAAGAAATATGGTAAAACATTGGTTGATTCATTGGCATCTGAGACATCTGGAGATTTTGAAAGTGCTCTATTATTAATCCTAAATACTTGTTTAAATCGTCCGAAAGCTTATTCCGATTTATTGGTGAAAGCAATGAAAGGTGCCGGTACCGATGATTGTACCCTAATGCGTATTATTGTAACAAGATGTGAGTTTGATTTAGGAAGTATTTGTATAGAATTTCAAAAAAGTCAGGGAAGTACACTTGAAGATTGGATACGTAATGAAACATCTGGTGATTATCAACGACTTCTATTAGCATTAATTGGTGCTGAATGGCAATAAAGAAGAATCAGAAGAGGAACATTTTGTCAAAAAGACGAAAAAAAGAAACCCAATTCAACATAACAAAGTTCACTGTTTAAAGAAATGATTTCCGTCTCTTAATTAATTCATTAAAAGTTATTTATTTTATCATCTAACAATCACCCTTCTTCATCAGTATTTCATTAACAATACTTTTAAATATAAAAC]




>consensus_10211#1
GCCAANAATTTGGCACGAGGTGGTGAAGCGCATACTAGGAACTGATGAAGATGCTATCAT
TAGGATTGTATGCGGTCGAAGTGTTTGGCATTTACAAGAGGTTTCTCATCTGTTTGAAAA
GAAATATGGTAAAACATTGGTTGATTCATTGGCATCTGAGACATCTGGAGATTTTGAAAG
TGCTCTATTATTAATCCTAAATACTTGTTTAAATCGTCCGAAAGCTTATTCCGATTTATT
GGTGAAAGCAATGAAAGGTGCCGGTACCGATGATTGTACCCTAATGCGTATTATTGTAAC
AAGATGTGAGTTTGATTTAGGAAGTATTTGTATAGAATTTCAAAAAAGTCAGGGAAGTAC
ACTTGAAGATTGGATACGTAATGAAACATCTGGTGATTATCAACGACTTCTATTAGCATT
AATTGGTGCTGAATGGCAATAAAGAAGAATCAGAAGAGGAACATTTTGTCAAAAAGACGA
AAAAAAGAAACCCAATTCAACATAACAAAGTTCACTGTTTAAAGAAATGATTTCCGTCTC
TTAATTAATTCATTAAAAGTTATTTATTTTATCATCTAACAATCACCCTTCTTCATCAGT
ATTTCATTAACAATACTTTTAAATATAAAAC

consensusID : consensus_10211#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 568
fasta sequence

                              [CACTGAAGGTTAGTTGTTGTAGCTGCTAAGTCTCTTCTTTTAATTTATTTATACAAATAATAATGGGAAGAGATAAATCACAAATAATTGGTCCAAATGGTGAAACTTATCATCCTACATTAAAAATTGATTTACATAATGATCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAATGAAAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTATCAACGAATGGAAATACGAGATACTTTTAAAGCAATGTATGGAAAGGATTTAATAGATGAATTGTGCAGTGAAACAAGCGGTGATTTTAGAAGACTACTTAAAATGCTTTTAACTGATATAGATAAAGTTGATGCACGTGCATTATACAAAGCAATGAAAGGTGGAGGAACTGATGAAGAAACAATTATTGAAGTTTTATGTACAGCAACTAATATTGAAATTGAAAATATTAAACAAGCTTATCTATCTGTTTTAAGGGATTATGGAATCAGTGATCCCAGTAGAACATTAGAAATTGATGTACAAAGTGATTTGGGCGGCTACTTACA]

[+] EMBL AI975042             [CACTGAAGGTTAGTTGTTGTAGCTGCTAAGTCTCTTCTTTTAATTTATTTATACAAATAATAATGGGAAGAGATAAATCACAAATAATTGGTCCAAATGGTGAAACTTATCATCCTACATTAAAAATTGATTTACATAATGATCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAATGAAAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTATCAACGAATGGAAATACGAGATACTTTTAAAGCAATGTATGGAAAGGATTTAATAGATGAATTGTGCAGTGAAACAAGCGGTGATTTTAGAAGACTACTTAAAATGCTTTTAACTGATATAGATAAAGTTGATGCACGTGCATTATACAAAGCAATGAAAGGTGGAGGAACTGATGAAGAAACAATTATTGAAGTTTTATGTACAGCAACTAATATTGAAATTGAAAATATTAAACAAGCTTATCTATCTGTTTTAAGGGATTATGGAATCAGTGATCCCAGTAGAACATTAGAAATTGATGTACAAAGTGATTTGGGCGGCTACTTACA]
[-] EMBL CD132294             [                                               TTTATACAAATAATAATGGGAAGAGATAAATCACAAATAATTGGTCCAAATGGTGAAACTTATCATCCTACATTAAAAATTGATTTACATAATGATCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAATGAAAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTATCAACGAATGGAAATACGAGATACTTTTAAAGCAATGTATGGAAAGGATTTAATAGA                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD134995             [                                                                                      ATTGGTCCAAATGGTGAAACTTATCATCCTCCATTAAAAATTGATTTACATAATGATCCAAAGAGAGATGCTGAAGAACTTTATCAAGCAATGAAAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTGATTCTTATCAACGAATGGAAATACGAGATACTTTTAAAGCAATGTATGGAAAGGATTTAATAGATGAATTGTGCAATGAAACAAGCGGTGATTTTAGAAGACTACTTAAAATGCTTTTAACTGATATAGATAAAGTTGATGCACGTGCATTATACAAAG                                                                                                                                                                                  ]




>consensus_10211#2
CACTGAAGGTTAGTTGTTGTAGCTGCTAAGTCTCTTCTTTTAATTTATTTATACAAATAA
TAATGGGAAGAGATAAATCACAAATAATTGGTCCAAATGGTGAAACTTATCATCCTACAT
TAAAAATTGATTTACATAATGATCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAATGA
AAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTATC
AACGAATGGAAATACGAGATACTTTTAAAGCAATGTATGGAAAGGATTTAATAGATGAAT
TGTGCAGTGAAACAAGCGGTGATTTTAGAAGACTACTTAAAATGCTTTTAACTGATATAG
ATAAAGTTGATGCACGTGCATTATACAAAGCAATGAAAGGTGGAGGAACTGATGAAGAAA
CAATTATTGAAGTTTTATGTACAGCAACTAATATTGAAATTGAAAATATTAAACAAGCTT
ATCTATCTGTTTTAAGGGATTATGGAATCAGTGATCCCAGTAGAACATTAGAAATTGATG
TACAAAGTGATTTGGGCGGCTACTTACA

consensusID : consensus_10211#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 276
fasta sequence

                              [GCGGCCAGAATTCGGCACGAGGAACAAGATGTTGAAATATTATGGGATGCTGGTGAAGCGCATCTAGGAACTGATGAAGATGCTATCATTAGGATTGTATGCGGTCGAAGTGTTTGGCATTTACTAGAGGTTTCTCATCTGTTTGAAAAGAAATATGGTAAAACATTGGTTGATTCATTGGCATCTGAGACATCTGGAGATTTTGAAAGTGCTCTATTATTAATCCTAAATACTTGTTTAAATCGTCCGAAAGCTTATTCCGATTTATTGGTGAAA]

[+] EMBL CD078105             [GCGGCCAGAATTCGGCACGAGGAACAAGATGTTGAAATATTATGGGATGCTGGTGAAGCGCATCTAGGAACTGATGAAGATGCTATCATTAGGATTGTATGCGGTCGAAGTGTTTGGCATTTACTAGAGGTTTCTCATCTGTTTGAAAAGAAATATGGTAAAACATTGGTTGATTCATTGGCATCTGAGACATCTGGAGATTTTGAAAGTGCTCTATTATTAATCCTAAATACTTGTTTAAATCGTCCGAAAGCTTATTCCGATTTATTGGTGAAA]




>consensus_10211#3
GCGGCCAGAATTCGGCACGAGGAACAAGATGTTGAAATATTATGGGATGCTGGTGAAGCG
CATCTAGGAACTGATGAAGATGCTATCATTAGGATTGTATGCGGTCGAAGTGTTTGGCAT
TTACTAGAGGTTTCTCATCTGTTTGAAAAGAAATATGGTAAAACATTGGTTGATTCATTG
GCATCTGAGACATCTGGAGATTTTGAAAGTGCTCTATTATTAATCCTAAATACTTGTTTA
AATCGTCCGAAAGCTTATTCCGATTTATTGGTGAAA

consensusID : consensus_10211#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 204
fasta sequence

                              [TATACAAAGCAATGAAAGGTGGAGGAACTGATGAAGAAACAATTATTGAAGTTTTATGTACAGCAACTAATATTGAAATTGAAAATATTAAACAAGCTTATCTATCTGTTTTAAGGGATTATGGAATCAGTGGTAAGTTAAACTGTTTGATTAACATAAAAAACTGAATGTTTTAATTGTCATAATATGGGACTGTTCAACGGT]

[+] EMBL CD191975             [TATACAAAGCAATGAAAGGTGGAGGAACTGATGAAGAAACAATTATTGAAGTTTTATGTACAGCAACTAATATTGAAATTGAAAATATTAAACAAGCTTATCTATCTGTTTTAAGGGATTATGGAATCAGTGGTAAGTTAAACTGTTTGATTAACATAAAAAACTGAATGTTTTAATTGTCATAATATGGGACTGTTCAACGGT]




>consensus_10211#4
TATACAAAGCAATGAAAGGTGGAGGAACTGATGAAGAAACAATTATTGAAGTTTTATGTA
CAGCAACTAATATTGAAATTGAAAATATTAAACAAGCTTATCTATCTGTTTTAAGGGATT
ATGGAATCAGTGGTAAGTTAAACTGTTTGATTAACATAAAAAACTGAATGTTTTAATTGT
CATAATATGGGACTGTTCAACGGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10211#2      --CACTGAAGGTTAGTTGTTGTAGCTGCTAAGTCTCTTCTTTTAATTTATTTATACAAAT 58
consensus_10211#4      ------------------------------------------------------------
consensus_10211#0      ------------------------TTAGTTTCGTCACTGAAGTAATTTATTTATACAAAT 36
consensus_10211#1      ------------------------------GCCAANAATTTGGCACGAGGTGGTGAAGCG 30
consensus_10211#3      GCGGCCAGAATTCGGCACGAGGAACAAGATGTTGAAATATTATGGGATGCTGGTGAAGCG 60
                                                                                   

consensus_10211#2      AATAATGGGAAGAGATAAATCACAAATAATTGGTCCAAATGGTGAAACTTATCATCCTAC 118
consensus_10211#4      ------------------------------------------------------------
consensus_10211#0      AATAATGGGAAGAGATAAATCACAAATAATTGGTCCAAATGGTGAAACTTATCATCCTAC 96
consensus_10211#1      CATACTAGGAACTGATGAAGATGCTATCATTAGGATTGTATGCGGTCGAAGTGTTTGGCA 90
consensus_10211#3      CAT-CTAGGAACTGATGAAGATGCTATCATTAGGATTGTATGCGGTCGAAGTGTTTGGCA 119
                                                                                   

consensus_10211#2      ATTAAAAATTGATTTACATAATGATCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAAT 178
consensus_10211#4      ------------------------------------------------------------
consensus_10211#0      ATTAAAAATTGATTTACATAATGATCCAAAGAAAGATGCTGAAGAACTTTATCAAGCAAT 156
consensus_10211#1      TTTACAAGAGGTTTCTCATCTGTTTGAAAAGAAATATGGTAAAACATTGGTTGATTCATT 150
consensus_10211#3      TTTACTAGAGGTTTCTCATCTGTTTGAAAAGAAATATGGTAAAACATTGGTTGATTCATT 179
                                                                                   

consensus_10211#2      GAAAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTA 238
consensus_10211#4      ------------------------------------------------------------
consensus_10211#0      GAAAGGATGGGGAACTGATGAGCATCGTATCATTAAAGTTTTGGGTTATCGTAATTCTTA 216
consensus_10211#1      GGCATCTGAGACATCTGGAGATTTTGAAAGTGCTCTATTATTAATCCTAAATACTTGTTT 210
consensus_10211#3      GGCATCTGAGACATCTGGAGATTTTGAAAGTGCTCTATTATTAATCCTAAATACTTGTTT 239
                                                                                   

consensus_10211#2      TCAACGAATGGAAATACGAGATACTTTTAAAGCAATGTATGGAAAGGATTTAATAGATGA 298
consensus_10211#4      ------------------------------------------------------------
consensus_10211#0      TCAACGAATGGAAATACGAGATACTTTTAAAGCAATGTATGGAAAGGATTTAATAGATGA 276
consensus_10211#1      AAATCGTCCGAAAGCTTATTCCGATTT---ATTGGTGAAAGCAATGAAAGGTGCCGGTAC 267
consensus_10211#3      AAATCGTCCGAAAGCTTATTCCGATTT---ATTGGTGAAA-------------------- 276
                                                                                   

consensus_10211#2      ATTGTGCAGTGAAACAAGCGGTGATTTTAGAAGACTACTTAAAATGCTTTTAACTGATAT 358
consensus_10211#4      ------------------------------------------------------------
consensus_10211#0      ATTGTGCAGTGAAACAAGCGGTGATTTTAGAAGACTACTTAAAATGCTTTTAACTGATAT 336
consensus_10211#1      CGATGATTGTACCCTAATGCGTATTATTGTAACAAGATGTGAGTTTGATTTAGGAAGTAT 327
consensus_10211#3      ------------------------------------------------------------
                                                                                   

consensus_10211#2      AGATAAAGTTGATGCACGTGCATTATACAAAGCAATGAAAGGTGGAGGAACTGATGAAGA 418
consensus_10211#4      -----------------------TATACAAAGCAATGAAAGGTGGAGGAACTGATGAAGA 37
consensus_10211#0      AGATAAAGTTGATGCACGTGCATTATACAAAGCAATGAAAGGTGGAGGAACTGATGAAGA 396
consensus_10211#1      TTGTATAGAATTTCAAAAAAGTCAGGGAAGTACACTTGAAGATTGGATACGTAATGAAAC 387
consensus_10211#3      ------------------------------------------------------------
                                                                                   

consensus_10211#2      AAC----AATTATTGAAG--TTTTATGTACAGCAACTAATATTGAA-ATTGAAAATATTA 471
consensus_10211#4      AAC----AATTATTGAAG--TTTTATGTACAGCAACTAATATTGAA-ATTGAAAATATTA 90
consensus_10211#0      AAC----AATTATTGAAG--TTTTATGTACAGCAACTAATATTGAA-ATTGAAAATATTA 449
consensus_10211#1      ATCTGGTGATTATCAACGACTTCTATTAGCATTAATTGGTGCTGAATGGCAATAAAGAAG 447
consensus_10211#3      ------------------------------------------------------------
                                                                                   

consensus_10211#2      AACAAGCTTATCTATCTGTTTTAAGGGATTATGGAATCAGTGATCCCAGTAGAA-CATTA 530
consensus_10211#4      AACAAGCTTATCTATCTGTTTTAAGGGATTATGGAATCAGTGGTAA-GTTAAAC-TGTTT 148
consensus_10211#0      AACAAGCTTATCTATCTGTTTTAAGGGATTATGGAATCAGTGATCCCAGTAGAA-CATTA 508
consensus_10211#1      AATCAGAAGAGGAACATTTTGTCAAAAAGACGAAAAAAAGAAACCCAATTCAACATAACA 507
consensus_10211#3      ------------------------------------------------------------
                                                                                   

consensus_10211#2      GA---AATTGATGTACAAAGTGATTTGGGCGGCTACTTACA------------------- 568
consensus_10211#4      GATTAACATAAAAAACTGAATGTTTTAATTGTCATAATATGGGA-CTGTTCAACGGT--- 204
consensus_10211#0      GA---AATTGATGTACAAAGTGATTTGGGCGGCTACTTACAACAGCTAGTCGTTGCATTG 565
consensus_10211#1      AAGTTCACTGTTTAAAGAAATGATTTCCGTCTCTTAATTAATTCATTAAAAGTTATTTAT 567
consensus_10211#3      ------------------------------------------------------------
                                                                                   

consensus_10211#2      ------------------------------------------------------------
consensus_10211#4      ------------------------------------------------------------
consensus_10211#0      CTTCAAGCTAAACGTGATGAAATTCCATTTGAAGATGTTGAAAAAATTAGTAAAAAAGGA 625
consensus_10211#1      TTTATCATCTAACAATCACCCTTCTTCATCAGTATTTCATTAACAATACTTTTAAATATA 627
consensus_10211#3      ------------------------------------------------------------
                                                                                   

consensus_10211#2      ------------------------------------------------------------
consensus_10211#4      ------------------------------------------------------------
consensus_10211#0      TTGAAAAGTGTAGTTGATATGAGTCAAGTTGAACAAGATGTTGAAATATTATGGGATGCT 685
consensus_10211#1      AAAC-------------------------------------------------------- 631
consensus_10211#3      ------------------------------------------------------------
                                                                                   

consensus_10211#2      ------------------------------------------------------------
consensus_10211#4      ------------------------------------------------------------
consensus_10211#0      GGTGAAGCGCATCTAGGAACTGATGAAGATGCTATCATTAAGATTGTATGCGGTCGAAGT 745
consensus_10211#1      ------------------------------------------------------------
consensus_10211#3      ------------------------------------------------------------
                                                                                   

consensus_10211#2      ------------------------------------------------------------
consensus_10211#4      ------------------------------------------------------------
consensus_10211#0      GTTTGGCATTTACAAGAGGTTTCTCATCTGTTTGAAAAGAAATATGGTAAAACATTGGTT 805
consensus_10211#1      ------------------------------------------------------------
consensus_10211#3      ------------------------------------------------------------
                                                                                   

consensus_10211#2      ------------------------------------------------------------
consensus_10211#4      ------------------------------------------------------------
consensus_10211#0      GATTCATTGGCATCTGAGACATCTGGAGATTNTGAAAGTGCTCTATTATTAATCCTAAAT 865
consensus_10211#1      ------------------------------------------------------------
consensus_10211#3      ------------------------------------------------------------
                                                                                   

consensus_10211#2      ------------------------------------------------------------
consensus_10211#4      ------------------------------------------------------------
consensus_10211#0      ACTTGTTTAAATCGTCCGAAAGCTTATTCCGATTTATTGGTGAAAGCAATGAAAGGTGCC 925
consensus_10211#1      ------------------------------------------------------------
consensus_10211#3      ------------------------------------------------------------
                                                                                   

consensus_10211#2      ---------------------------------------------------
consensus_10211#4      ---------------------------------------------------
consensus_10211#0      GGTACCGATGATTGTACCCTAATGCGTATTATTGTAACAAGATGTGAGTTT 976
consensus_10211#1      ---------------------------------------------------
consensus_10211#3      ---------------------------------------------------