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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10212#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1106 fasta sequence
[GTTCTACTTTTTCAGTTGACCATAAGAAAGTGGTATATAAATTAGGCGATCAACCCCCACCTTTGGCTACTGAAAAAGTAGAACACATAATTACCAGTCAAGATTGTGACAGAAGTGATATCGTGTTAGTAGAGTCAGGTGAGTTCCTTGAGGAAGATCACGCTGATTGCTCCTCG--AAAGAACAAG-AATTTGGGTTGGATAAAGTTACTTGTTATC-AACAATTGGATATAGTTGATGACGAAGGAGCCTTAGTATTCGACAACGACCTTCCATCACCTCCGATTTCAGTTTGTGAAGAGTTACACAAAGAGGATACTGGGGAATTATCACCATTTCCTTTGACG-CATTCAGCAATTCCAGAAAATTGTATCAAATCCGAATTATCGTCAAATAACCAACCAGAAGCGATACCTGAATACTGTACAGATATTAAAATT-GGACAAATTGTGGGTGAAACTTTAGATACAATAAGTGATCATTACTTAGTCGAACCAACTAATTTT-TATTCAGATCC-CATTCCATCTACAAAGAACTTTACAGAAGAAGACGCTGAAAATTCACTAGAAGAGCCTACTGAAGAACAATTGAATAGTCAATCCGTTGACTACTTAGAGAAAACATATTGATATAGAGGTTCGAGTTGACCAACAGAACGACGTCGCTAGTATATTTGAACTGAAAGGCAAAACAAACACTGAAAAAGAATCAACAGAATCGCTTGACTT-TCAAGAAGAATCAATCAGTTCATTGAATCCTGAAAACGAGGCAACCGAACCATCTTACGTAGAGAAAGAATCCCCTACATTATCTACCAGTGAAAAACAAATTGATAAATCTTCTGATCTTGACGAAGAAATAACTAACCCGGTTTACACTGAGAAAGCAACAAACGTTCCTGGTAAATCAGAAAATTTTCAAACTTTTCTACCATCTGTTGAAATCTCGAATTCTTTAACATCTACTGAATTTTGTCCAGAAGAAGAA-GTAGTAGTAGTAGACGAGCACGGAAGAAATATTAGTTCTACAGTTGACGCTGAACTACTAGACGAAACACATTCTAGNNNNNNGTTCGCGCAGTCTGTAACATCATCAATACTAACCGACTC]
[+] EMBL CD071580 [GTTCTACTTTTTCAGTTGACCATAAGAAAGTGGTATATAAATTAGGCGATCAACCCCCACCTTTGGCTACTGAAAAAGTAGAACACATAATTACCAGTCAAGATTGTGACAGAAGTGATATCGTGTTAGTAGAGTCAGGTGAGTTCCTTGAGGAAGATCACGCTGATTGCTCCTCG AAAGAACAAG AATTTGGGTTGGATAAAGTTACTTGTTATC AACAATTGGATATAGTTGATGACGAAGGAGCCTTAGTATTCGACAACGACCTTCCATCACCTCCGATTTCAGTTTGTGAAGAGTTACACAAAGAGGATACTGGGGAATTATCACCATTTCCTTTGACG CATTCAGCAATTCCAGAAAATTGTATCAAATCCGAATTATCGTCAAATAACCAACCAGAAGCGATACCTGAATACTGTACAGATATTAAAATT GGACAAATTGTGGGTGAAACTTTAGATACAATAAGTGATCATTACTTAGTCGAACCAACTAATTn ]
[+] EMBL CD160029 [ cgggTCAGTTGACCATAAGAAAGTGGTATATAAATTAGGCGATCAACCCCCACCTTTGGCTACTGAAAAAGTAGAGCAAATAATTACCAGTCAAGATTGTGACAGAAGTGATATCGTGTTAGTAGAGTCAGGTGAGTTCCTTGAGGAAGATCACGCTGATTGCTCCTCG AAAGAACAAG AATTTGGGTTGGATAAAGTTACTTGTTATC AACAATTGGATATAGTTGATGACGAAGGAGCCTTAGTATTCGACAACGACCTTCCATCACCTCCGATTTCAGTTTGTGAAGAGTTACACAAAGAGGATACTGGGGAATTATCACCATTTCCTTTGACG CATTCAGCAATTCCAGAAAATTGTATCAAATCCGAATTATCGTCAAATAACCAACCAGAAGCGATACCTGAATACTGTACAGATCTTACAAT ]
[-] EMBL CD189899 [ GGTGAGTTCC TGAGAAAGATCACGCTGA TGCT CTCGNNAAAG ACAAGNAATTTGGGTTGGATAAAGTTACTGTTTATC AACAATTGGATATAGTTGATGACGAAGGAG CNTAGTATTCGACAACGACCTTCCATCACCTCCGATTTCAGTTAGTGAAGAGTTACACAAAGAGGATACTGGGGAATTATCACCATTTCCTTTGACG CATTCAGCAATTCCAGAAAATTGTATCAAATCCGAATTATCGTCAAATAACCAACCAGAAGCGATACCTGAATACTGTACAGATATTAAAATTGGGCCAAATTG GGGTGAAACTTTAGATACAATAAGTGATCATTACTTAGTCGAACCCACTAATTTT TA TCAGATCC CATTCCAT TACAAAG ACTTTACAGAAGAAGACGCT ]
[+] EMBL CD171568 [ GATTGCTCCTCG AAAGAACAAG AATTTGGGTTGGATAAAGTTACTTGTTATCAAACAATTGGATATAGTTGATGACGAAGGAGCCTTAGTATTCGACAACGACCTTCCATCACCTCCGATTTCAGTTTGTGAAGAGTTACACAAAGAGGAAACTGGGGAATTATa ]
[+] EMBL CD171531 [ GATTGCTCCTCG AAAGAACAAG AATTTGGGTTGGATAAAGTTACTTGTTATC AACAATTGGATATAGTTGATGACGAAGGAGCCTTAGTATTCGACAACGACCTTCCATCACCTCCGATTTCAGTTTGTGAAGAGTTACACAAAGAGGATACTGGGGAATTATCACCATTTCCTTTGACG CATTCAGCAATTCCAGAAAATTGTATCAAATCCGAATTATCGTCAAATAACCAACCAGAAGCGATACCTGAATACTGTACAGATATTAAAATT GGACANATTGTGGGTGAAACTTTAGATACAATAAGTGATCATTACTTAGTCGAACCAct ]
[+] EMBL CD177737 [ TAAAGTTACTTGTTATC AACAATTGGATACAGTTGATGACGAAGGAGCCTTAGTATTCGACAACGACCTTCCATCACCTCCGATTTCAGTTTGTGAAGAGTTACACAAAGAGGACACTGGGGA ]
[+] EMBL CD130603 [ TACTTGTTATC AACAATTGGATATAGTTGATGACGAAGGAGCCTTAGTATTCGACAACGACCTTCCATCACCTCCGATTTCAGTTTGTAAAGAGTTACACAAAGAGGATACTGGGGAATTATCACCATTTCCTTTGACGNCATTCAGCAATTCCAGAAAATTGTATCAAATCCGAATTATCGTCAAATAACCAACCAGAAGCGATACCTGAATACTGTACAGATATTAAAATT GGACAAATTGTGGGTGAAACTTTAGATACCATAAGTGATCATTACTTAGTCGAACCAACTAATTNT TATTCAGATCC CATTCCATCTACANAGAACTTTACAGAAGAAGACGCTGAA ]
[+] EMBL CD168184 [ ATTCGACAACGACCTTCCATCACCTCCGATTTCAGTTTGTGAAGAGTTACACAAAGAGGATACTGGGGAATTATCACCATTTCCTTTGACG CATTCAGCAATTCCAGAAAATTGTATCAAATCCGAATTATCGTCAAATAACCAACCAGAAGCGATACCTGAATACTGTACAGATATTAAAATT GGACAAATTGTGGGTGAAACTTTAGATACAATAAGTGATCATTACTTAGTCGAACCAACTAATTTT TATTCAGATCC CATTCCATCTACAAAGAACTTTACAGAAGAAGACGCTGAAAATTCACTAGAAGAGCCTACTGAAGAACAATTGAATAGTCAATCCGTTGA ]
[+] EMBL CD168227 [ ATTCGACAACGACCTTCCATCACCTCCGATTTCAGTTTGTGAAGAGTTACACAAAGAGGATACTGGGGAATTATCACCATTTCCTTTGACG CATTCAGCAATTCCAGAAAATTGTATCAAATCCGAATTATCGTCAAATAACCAACCAGAAGCGATACCTGAATACTGTACAGATATTAAAATT GGACAAATTGTGGGTGAAACTTTAGATACAATAAGTGATCATTACTTAGTCGAACCAACTAATTTT TATTCAGATCC CATTCCATCTACAAAGAACTTTACAGAAGAAGACGCTGAAAATTCACTAGAAGAGCCTACTGAAGAACAATTGAATAGTCAATCCGTTGA ]
[+] EMBL CD065349 [ TTTAGATACAATAAGTGATCATTACTTAGTCGAACCAACTAATTTTATATTCAGATCCGCATTCCATCTACAAAGAACTTTACAGAAGAAGACGCTGAAAATTCACTAGAAGAGCCTACTGAAGAACAATTGAATAGTCAATCCGTTGACTACTTAGAGAAAACATATTGATATAGAGGTTCGAGTTGACCAACAGAACGACGTCGCTAGTATATTTGAACTGAAAGGCAAAACAAACACTGAAAAAGAATCAACAGAATCGCTTGACTT TCAAGAAGAATCAATCAGTTCATTGAATCCTGAAAACGAGGCAACCGAACCATCTTACGTAGAGAAAGAAT ]
[-] EMBL CD119550 [ ATCANCAGAATCGC TGACTTNNCAAGGAGAATCAATCAGTTCATGNAATCCTGAAAACGAGGCAACCGAACCATCTTACGTAGAGAAAGAATCCCCTACATTATCTACCAGTGAAAAACAAATTGATAAATCTTCTGATCTTGACGAGGAAATAACTAACCCGGTTTACACTGAGAAAGCAACAAACGTTCCTGGTAGATCAGAAAATCTTCAAACTTTTCTACCATCTGTTGAAATCTCGAATTCTTTAACATCTACCGAATCTTGTCCAGAAGAAGAA GTAGTAGTAGTAGACGAGCACGGAAGAAATATTAGTTCTACAGTTGACG ]
[+] EMBL CD195412 [ CATTGAATCCTGAAAACGAGGCAACCGAACCATCTTACGTAGAGAAAGAATCCCCTACATTATCTACCAGTGAAAAACAAATTGATAAATCTTCTGATCTTGACGAAGAAATAACTAACCCGGTTTACACTGAGAAAGCAACAAACGTTCCTGGTAAATCAGAAAATTTTCAAACTTTTCTACCATCTGTTGAAATCTCGAATTCTTTAACATCTACTGAATTTTGTCCAGAAGAAGAA GTAGTAGTAGTTGACGAGCACGGAAGAAATATTAGTTC ]
[-] EMBL CD119416 [ ATCCTGAAAACGAGGCAACCGAACCATCTTACGTAGAGAAAGAATCCCCTACATTATCTACCAGTGAAAAACAAATTGATAAATCTCCTGATCTTGACGAAGAAATAACTAACCCGGTTTACACTGAGAAAGCAACAAACGTTCCTGGTAAATCAGAAAATTTTCAAACTTTTCTACCATCTGTTGAAATCTCGAATTCTTTAACATCTACTGAATTTTGTCCAGAAGAAGAA GTAGTAGTAGTAGACGAGCACGGAAGAAATATTAGTTCTACAGTTGACG ]
[-] EMBL CD202576 [ AATTGATAAATCTTCTGATCTTGACGAAGAAATAACTAACCCGGTTTACACTGAGAAAGCAACAAACGTTCCTGGTAAATCAGAAAATTTTCAAACTTTTCTACCATCTGTTGAAATCTCGAATTCTTTAACATCTACTGAATTTTGTCCAGAAGAAGAACCTAGTAGTAGTAGACGAGCACGGAAGAAATATTAGTTCTACAGTTGACGCTGAACTACTAGACGAAACACATTCTAGNNNNNNGTTCGCGCAGTCTGTAACATCATCAATACTAACCGACTC]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||