cluster # 10225

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Schistosoma mansoni
cluster # 10225 cluster # 10225 Sequences # 14 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10225#0 length = 963 sequences # 12

consensus_10225#1 length = 791 sequences # 1
consensus_10225#2 length = 337 sequences # 1

consensusID : consensus_10225#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 963
fasta sequence

                              [GGGACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTATATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAATATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCATCACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGTGTGTAAGGATGAGCCAAGAACGTCTTGAATGAATTAAATTAATCTAATTGCTTTATCATTATACATCAGTCATCGTTATGAAAATATTTCTACATCAAACACAGTCCTTGGTCGTAACGTTTTACAACCTAATTATACCTAACTTTAAAGAGACAAACCTAAATGCTTATTTAATGCTTGTCGAGTCTTTACCATATCTTTCATCAGATTCGATATGACGTGACGCTTAGTTATGTTAGTATTCACTACTAAGATTCCCGTTGTTATTTGGTTGTAACGTGCTGTTTGTTTTTGTTAAGCGTCCTTTGATCAGGTACTTTATTGTAACTGCCGAACTTATTTCTNCTGAGGGCTT-ACATTNTCACAATTTCTCGACTATTGTAGTTATCGTAGTTACATTCTCGAGATGCTTCGAAATAG-TGCCGTAGATACCA-TTGTGGGTTGTCTTTA-GCGACTAGAGTACATAGGTT]

[+] EMBL AI975976             [GGGACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTATATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAATATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCATCACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGTGTGTAAGGATGAGCCAAGAACGTCTTGAATGAAATAAAATAATCTAATTGCTTTATCA                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AI975527             [GGGACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTATATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAATATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCATCACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGTGTGTAAGGATGAGCCAAGAACGTCTTGAATGAATTAAATTAATCTAATTGCTTTATCATTATACATCAGTCATCGTTATGAAAATATTTCTACATCAAACACAGTCCTTGGTCGTAACGTTTTACAACCTAATTATACCTAACTTTAAAGAGACAAACCTAAATGCTTATTTAA                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD185110             [GGGACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTATATGAACTGAACAAGAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTCGATGAGGACAATATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCATCACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGAGAAAAGTGTGTCGGTGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AI975171             [GGGACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTATATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAATATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCATCACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AI975639             [GGGACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTATATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAATATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCATCACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAAGAATTTAGGGAGGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGTGTGTAA GATGAACCAAGAACGTCTTGAATGAATTAAATTAATCTAATTGCTTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AI975369             [  GACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTATATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAATATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCATCACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGTGTGTAAGGATGAGCCAAGAACGTCTTGAATGAATTAAATTAATCTAATTGCTNTATCATTATACATCAGTCATCGTTATGAAAA                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD190391             [                                                                                                                                     GAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCATCACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGAGTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD079651             [                                                                                                                                                                      tTGAGGGTGGTTGTTTT ATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCATCACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGTGTGTAAGGATGAGCCAAGAACGTCTTGAATGAATTAAATTAATCTAATTGCTTTATCATTATACATCAGTCATCGTTATGAAAATATTTCTACATCAAACACAGTCCTTGGTCGTAACGTTTTACAACCTAATTATACCTAACTTTAAAGAGACAAACCTAAATGCTTATTTAATGCTTGTCGAGTCTTTACCATATCTTTCATCAGATTCGATATGACGTGACGCTTAGTTATGTTAGTATTCACTACTAAGATTCCCGTTGTTATTTGGTTGTAACGTGCTGTTTGTTTTTGTTAAGCGTCCTTTGATCAGGTACTTTATTGTAACTGCCGAACTTATTTCTNCTGAGGGCTT ACATTNTCACAATTTCTCGACTATTGTAGTTATCGTAGTTACATTCTCGAGATGCTTCGAAATAG TGCCGTAGATACCA TTGTGGGTTGTCTTTA GCGACTAGAGTACATAG   ]
[-] EMBL CD074834             [                                                                                                                                                                                                                                                                      ATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCATCACCCCGGAAAAGATTTGTGGGGTTATTAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAAAGAAAAGTATGTCGGTGTGTAAGGATGATCCAAGAACGTCTTGAATGAATTAAATTAATCTAATTGCTTTATCATTATACATCAGTCATCGTTATGAAAATATTTTTACATCAAACCCAGTCCTTGGTCGTAACGTTTTACAACCTAATTATACCTAACTTTAAAGAGACAAACCTAAATGCTTATTTAATGCTTGTCGAGTCTTTACCATATCTTTCATCAGATTCGATATGACGTGACGCTTAGTTATGTTAGTATTCCCTACTAAGATTCCCGTTGTTATTTGGTTGTAACGTGCTGTTTGTTTTTGTTAAGCGTCCTTTGATCAGGTACTTTATTG                                                                                                                                                      ]
[+] EMBL CD145800             [                                                                                                                                                                                                                                                                                           TTTGCATCTCTATTCTTCATCACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGTGTGTAAGGATGAGCCAAGAACGTCTTGAATGAATTAAATTAATCTAATTGCTTTATCATTATACATCAGTCATCGTTATGAAAATATTTCTACATC                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD073913             [                                                                                                                                                                                                                                                                                                                ACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGTGTGTAAGGATGAGCCAAGAACGTCTTGAATGAATTAAATTAATCTAATTGCTTTATCATTATACATCAGTCATCGTTATGAAAATATTTTTACATCAAACACAGTCCTTGGTCGTAACGTTTTACAACCTAATTATACCTAACTTTAAAGAGACAAACCTAAATGCTTATTTAATGCTTGTCGAGTCTTTACCATATCTTTCATCAGATTCGATATGACGTGACGCTTAGTTATGTTAGTATTCACTACTAAGATTCCCGTTGTTATTTGGTTGTAACGTGCTGTTTGTTTTTGTTAAGCGTCCTTTGATCAGGTACTTTATTGTAACTGCCGAACTTATTTCTCCTGA GGCTTAACATTTTCACAATTTCTCGACTATTGTAGTTATCGTAGTTACATTCTCGAGATGCTTCGAATAAGTTGCCGTAGATAACATTTGTGGTTTGTCTTTAGGCGACTAAAGTACATTAGTT]
[+] EMBL CD080167             [                                                                                                                                                                                                                                                                                                                                                                                                   GTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGTGTGTAAGGATGAGCCAAGAACGTCTTGAATGAATTAAATTAATCTAATTGCTTTATCATTATACATCAGTCATCGTTATGAAAATATTTCTACATCAAACACAGTCCTTGGTCGTAACGTTTTACAACCTAATTATACCTAACTTTAAAGAGACAAACCTAAATGCTTATTTAATGCTTGTCGAGTCTTTACCATATCTTTCATCAGATTCGATATGACGTGACGCTTAGTTATGTTAGTATTCACTACTAAGATTCCCGTTGTTATTTGGTTGTAACGTGCTGTTTGTTTTTGTTAAGCGTCCTTTGATCAGGT                                                                                                                                                               ]




>consensus_10225#0
GGGACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTA
TATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAAT
ATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGT
TTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTC
GTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTT
CATCACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGTG
CATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGAC
AGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGAGA
AAAGTATGTCGGTGTGTAAGGATGAGCCAAGAACGTCTTGAATGAATTAAATTAATCTAA
TTGCTTTATCATTATACATCAGTCATCGTTATGAAAATATTTCTACATCAAACACAGTCC
TTGGTCGTAACGTTTTACAACCTAATTATACCTAACTTTAAAGAGACAAACCTAAATGCT
TATTTAATGCTTGTCGAGTCTTTACCATATCTTTCATCAGATTCGATATGACGTGACGCT
TAGTTATGTTAGTATTCACTACTAAGATTCCCGTTGTTATTTGGTTGTAACGTGCTGTTT
GTTTTTGTTAAGCGTCCTTTGATCAGGTACTTTATTGTAACTGCCGAACTTATTTCTNCT
GAGGGCTTACATTNTCACAATTTCTCGACTATTGTAGTTATCGTAGTTACATTCTCGAGA
TGCTTCGAAATAGTGCCGTAGATACCATTGTGGGTTGTCTTTAGCGACTAGAGTACATAG
GTT

consensusID : consensus_10225#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 791
fasta sequence

                              [GGACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTATATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAATATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGNNNNNNNNNNNNNNNNTTCATCACCCCGGAAAAGATTTGTGGGGTTATTAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGTGTGTAAGGATGATCCAAGAACGTCTTGAATGAATTAAATTAATCTAATTGCTTTATCATTATACATCAGTCATCGTTATGAAAATATTTCTACATCAAACACAGTCCTTGGTCGTAACGTTTTACAACCTANNNNNNNNNNNNNNNNNNNAAGACAACCTAAATGCTTATTTAATGCTTGTCGAGTCTTTACCATATCTTTCATCAGATTCGATATGACGTGACGCTTAGTTATNGTAGTATTCACTACTAAGATTCCNNGTGNNNTATTGNTTGTAACGTGCTGTTTGGTTTTTGGTTAGCGTCCTTTGATCAGGTACTTTATT]

[+] EMBL CD081008             [GGACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTATATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAATATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGNNNNNNNNNNNNNNNNTTCATCACCCCGGAAAAGATTTGTGGGGTTATTAAAGGCCTGAGGAAAGATGGCTTCCTGTGCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGACAGTCCTGCCAATGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGTGTGTAAGGATGATCCAAGAACGTCTTGAATGAATTAAATTAATCTAATTGCTTTATCATTATACATCAGTCATCGTTATGAAAATATTTCTACATCAAACACAGTCCTTGGTCGTAACGTTTTACAACCTANNNNNNNNNNNNNNNNNNNAAGACAACCTAAATGCTTATTTAATGCTTGTCGAGTCTTTACCATATCTTTCATCAGATTCGATATGACGTGACGCTTAGTTATNGTAGTATTCACTACTAAGATTCCNNGTGNNNTATTGNTTGTAACGTGCTGTTTGGTTTTTGGTTAGCGTCCTTTGATCAGGTACTTTATT]




>consensus_10225#1
GGACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTAT
ATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAATA
TTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTT
TTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTCG
TGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGNNNNNNNNNNNNNNNNTT
CATCACCCCGGAAAAGATTTGTGGGGTTATTAAAGGCCTGAGGAAAGATGGCTTCCTGTG
CATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGAC
AGTCCTGCCAATGATTTTGCGGAGTTCAAGAGAAAAGTATGTCGGTGTGTAAGGATGATC
CAAGAACGTCTTGAATGAATTAAATTAATCTAATTGCTTTATCATTATACATCAGTCATC
GTTATGAAAATATTTCTACATCAAACACAGTCCTTGGTCGTAACGTTTTACAACCTANNN
NNNNNNNNNNNNNNNNAAGACAACCTAAATGCTTATTTAATGCTTGTCGAGTCTTTACCA
TATCTTTCATCAGATTCGATATGACGTGACGCTTAGTTATNGTAGTATTCACTACTAAGA
TTCCNNGTGNNNTATTGNTTGTAACGTGCTGTTTGGTTTTTGGTTAGCGTCCTTTGATCA
GGTACTTTATT

consensusID : consensus_10225#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 337
fasta sequence

                              [TCGGTCCGAGGTTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTATATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAATATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATTCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCATCACCCCGGAAAGATTTGTGGGTTATGAAAGGCTGAG]

[+] EMBL CD077661             [TCGGTCCGAGGTTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTATATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAATATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATTCGGTTCGTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCATCACCCCGGAAAGATTTGTGGGTTATGAAAGGCTGAG]




>consensus_10225#2
TCGGTCCGAGGTTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTATA
TGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAATAT
TTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGTTT
TCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATTCGGTTCGT
GACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTTCA
TCACCCCGGAAAGATTTGTGGGTTATGAAAGGCTGAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10225#0      GGGACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTA 60
consensus_10225#2      TCGGTCCGAGG--TTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTA 58
consensus_10225#1      -GGACACAGAGCATTAACATGTGTACTTCATTATCTGCTCTCTCGCTAAAAAAACAGTTA 59
                         *   *   *  ***********************************************

consensus_10225#0      TATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAAT 120
consensus_10225#2      TATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAAT 118
consensus_10225#1      TATGAACTGAACAAAAGCGCAACTGAAGGTTTTTCGGCGGGCTTGGTTGATGAGGACAAT 119
                       ************************************************************

consensus_10225#0      ATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGT 180
consensus_10225#2      ATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGT 178
consensus_10225#1      ATTTTCAAATGGAGAGTGCTTATCATTGGCCCACCAGACACTCTTTATGAGGGTGGTTGT 179
                       ************************************************************

consensus_10225#0      TTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTC 240
consensus_10225#2      TTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATTCGGTTC 238
consensus_10225#1      TTTCATGCAGAGCTGGACTTCCCACAAGATTACCCCGAGCGCCCTCCTAAAATGCGGTTC 239
                       ***************************************************** ******

consensus_10225#0      GTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTT 300
consensus_10225#2      GTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGTTTGCATCTCTATTCTT 298
consensus_10225#1      GTGACTGATATCTGGCATCCAAATATTGCTCAAGACGGAGATGNNNNNNNNNNNNNNNNT 299
                       *******************************************                *

consensus_10225#0      -CATCACCCCGGAAAAGATTTGTGGGGTTATGAAAGGCCTGAGGAAAGATGGCTTCCTGT 359
consensus_10225#2      -CATCACCCCGGAAA-GATTTGTGGG-TTATGAAAGGC-TGAG----------------- 337
consensus_10225#1      TCATCACCCCGGAAAAGATTTGTGGGGTTATTAAAGGCCTGAGGAAAGATGGCTTCCTGT 359
                        ************** ********** **** ****** ****                 

consensus_10225#0      GCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGA 419
consensus_10225#2      ------------------------------------------------------------
consensus_10225#1      GCATACTGTAGAAACAATTATTACTTCTGTTATTTCGATGCTTGCTGAGCCTAATCCTGA 419
                                                                                   

consensus_10225#0      CAGTCCTGCCAATGTGGATGCAGCTAAGGAATTTAGGGAGGATTTTGCGGAGTTCAAGAG 479
consensus_10225#2      ------------------------------------------------------------
consensus_10225#1      CAGTCCTGCCAATG---------------------------ATTTTGCGGAGTTCAAGAG 452
                                                                                   

consensus_10225#0      AAAAGTATGTCGGTGTGTAAGGATGAGCCAAGAACGTCTTGAATGAATTAAATTAATCTA 539
consensus_10225#2      ------------------------------------------------------------
consensus_10225#1      AAAAGTATGTCGGTGTGTAAGGATGATCCAAGAACGTCTTGAATGAATTAAATTAATCTA 512
                                                                                   

consensus_10225#0      ATTGCTTTATCATTATACATCAGTCATCGTTATGAAAATATTTCTACATCAAACACAGTC 599
consensus_10225#2      ------------------------------------------------------------
consensus_10225#1      ATTGCTTTATCATTATACATCAGTCATCGTTATGAAAATATTTCTACATCAAACACAGTC 572
                                                                                   

consensus_10225#0      CTTGGTCGTAACGTTTTACAACCTAATTATACCTAACTTTAAAGAGACAAACCTAAATGC 659
consensus_10225#2      ------------------------------------------------------------
consensus_10225#1      CTTGGTCGTAACGTTTTACAACCTANNNNNNNNNNNNNNNNNNNAAGACAACCTAAATGC 632
                                                                                   

consensus_10225#0      TTATTTAATGCTTGTCGAGTCTTTACCATATCTTTCATCAGATTCGATATGACGTGACGC 719
consensus_10225#2      ------------------------------------------------------------
consensus_10225#1      TTATTTAATGCTTGTCGAGTCTTTACCATATCTTTCATCAGATTCGATATGACGTGACGC 692
                                                                                   

consensus_10225#0      TTAGTTATGTTAGTATTCACTACTAAGATTCCCGTTGTTAT-TTGGTTGTAACGTGCTGT 778
consensus_10225#2      ------------------------------------------------------------
consensus_10225#1      TTAGTTATNGTAGTATTCACTACTAAGATTCCNNGTGNNNTATTGNTTGTAACGTGCTGT 752
                                                                                   

consensus_10225#0      TTG-TTTTTGTTAAGCGTCCTTTGATCAGGTACTTTATTGTAACTGCCGAACTTATTTCT 837
consensus_10225#2      ------------------------------------------------------------
consensus_10225#1      TTGGTTTTTGGTTAGCGTCCTTTGATCAGGTACTTTATT--------------------- 791
                                                                                   

consensus_10225#0      NCTGAGGGCTTACATTNTCACAATTTCTCGACTATTGTAGTTATCGTAGTTACATTCTCG 897
consensus_10225#2      ------------------------------------------------------------
consensus_10225#1      ------------------------------------------------------------
                                                                                   

consensus_10225#0      AGATGCTTCGAAATAGTGCCGTAGATACCATTGTGGGTTGTCTTTAGCGACTAGAGTACA 957
consensus_10225#2      ------------------------------------------------------------
consensus_10225#1      ------------------------------------------------------------
                                                                                   

consensus_10225#0      TAGGTT 963
consensus_10225#2      ------
consensus_10225#1      ------