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Schistosoma mansoni
cluster # 10237 cluster # 10237       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10237#0 length = 1340 sequences # 5  
consensus_10237#1 length = 1038 sequences # 8  
consensus_10237#2 length = 209 sequences # 1  

consensusID : consensus_10237#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1340
fasta sequence
                              [TCTACCTTTTTCCGTAGTAGGTTATTAAGAAATGTCAGAAGTAAACGAATGCGAATGTGAAGAATTCTTGAACATTGTTAAGTTGTCTTTGGAGGAAGATAAAAGTCATGTTCATGTTCTTGTGATCATCGGAGCTTCTGGTGATTTGGCAAAGAAAAAGACTTATCCAACTTTATGGTGGTTGTTCCGTGATGGTCTGCTGCCTCCTCGAACTTACTTTGTTGGGTTCGCACGATCTGATATTGGTATTGAGGACATAAGAGCGGGAAGTGAAAAAATTGCCAAGCTCTCATCACATCCATGTCAAAAATATGAAGAATTTTGGAACTGTAATTTTTACATGAGAGGAGACTACACGAATCCCAAAACATTTGAATTATTAAATGAGTTTATAGAATCTAAGTGGGGACAAGCTGTTAATCGCATATTTTATTATGCTATACCACCATCAGTTTATAAACCTGTTTCGTCATCTATCAAAGAATATTGTACTAACAAAAACCCTGATACGTGGACTCGATTGATCATTGAAAAACCGTTTGGACGAGATTTAGAGTCATT-CAATGAAT-TGAATTGTGAATTAACTAAACTGTTTACAGAAGAACAGATTTATCGAATCGATCATTATTTGGGCAAAGAAATGGTTCAAAATCTATTAATTTTACGATTCTGTAATCAGGT-C-TTCAGTCCACTGTGGAATCGTGAAAATATTGATAATATTACAATATCATTTAAAGAACCATTCNGAACCGAAGGACGTGGTGGATATTNTGATCAATTT-GAATTATTCGCGATGTCGTTCAAAATCACCTTTATCAGAATCTTTCATTGGNTAGCATGAAAAAACCTGTTTCAGTTATGCANATGATATACGTGATGAAAAGGTTCGTGTGCTTTCTAGCATTGAACCCTTAACAATAAACGACATTGTAATGGGACATACCTTTGCGATCCAATGGCACAAATCCCCCTGTTGGTTTTTTAACCAGAAGAAACCGCCTTTCCTAAAAATCCATACACCTCTTATGGTTTGGGTTGNNNNNTAAAAATNAGAANGGGAAAAGGGGTTCCAATTTTCCCGGCCTGTGGTTTAAAGTAGGTTTGGGAAAGAAAGATTACCTTTGTAGCCGATTTCCCCATTGTTGGAAAAAATTTTACCCGAGTTGGGGGGGCTTGNNNNNNNNNNNNNNNNNNNNCNNNAAGNANGNNGCNCTCTTNNNNNNNNNNGAACCATACTATACCCCCCNNNNNNNCCNNNNNNNNNNNNNNNNNAAGGCCCCTAAAAGAAAAACTCTGTGGGGGAAAAATGACCTCCTCGGGGGACCCCCAAAAAGGGGAAA]

[+] EMBL CD068607             [TCTACCTTTTTCCGTAGTAGGTTATTAAGAAATGTCAGAAGTAAACGAATGCGAATGTGAAGAATTCTTGAACATTGTTAAGTTGTCTTTGGAGGAAGATAAAAGTCATGTTCATGTTCTTGTGATCATCGGAGCTTCTGGTGATTTGGCAAAGAAAAAGACTTATCCAACTTTATAGTGGTTGTTCCGTGATGGTCTGCTCCCTCCTCGAACTTACTTTGTTGGGTTCGCACGATCTGATATTGGTATTGAGGACATAAGAGCGGGAAGTGAAAAATTTGCCAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BF936567             [                              AATGTCAGAAGTAAACGAATGCGAATGTGAAGAATTCTTGAACATTGTTAAGTTGTCTTTGGAGGAAGATAAAAGTCATGTTCATGTTCTTGTGATCATCGGAGCTTCTGGTGATTTGGCAAAGAAAAAGACTTATCCAACTTTATGGTGGTTGTTCCGTGATGGTCTGCTGCCTCCTCGAACTTACTTTGTTGGGTTCGCACGATCTGATATTGGTATTGAGGACATAAGAGCGGGAAGTGAAAAAATTGCCAAGCTCTCATCACATCCATGTCAAAAATATGAAGAATTTTGGAACTGTAATTTTTACATGAGAGGAGACTACACGAATCCCAAAACATTTGAATTATTAAATGAGTTTATAGAATCTAAGTGGGGACAAGCTGTTAATCGCATATTTTATTATGCTATACCACCATCAGTTTATAAACCTGTTTCGTCATCTATCAAAGAATATTGTACTAACAAAAACCCTGATACGTGGACTCGATTGATCATTGAAAAACCGTTTGGACGAGATTTAGAGTCATT CAATGAAT TGAATTGTGAATTAACTAAACTGTTTACAGAAGAACAGATTTATCGAATCGATCATTATTTGGGCAAAGAAATGGTTCAAAATCTATTAATTTTACGATTCTGTAATCAGGTGCTTTCAGTCCACTGTGGAATCGTGAAAATATTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AI976412             [                              AATGTCAGAAGTAAACGAATGCGAATGTGAAGAATTCTTGAACATTGTTAAGTTGTCTTTGGAGGAAGATAAAAGTCATGTTCATGTTCTTGTGATCATCGGAGCTTCTGGTGATTTGGCAAAGAAAAAGACTTATCCAACTTTATGGTGGTTGTTCCGTGATGGTCTGCTGCCTCCTCGAACTTACTTTGTTGGGTTCGCACGATCTGATATTGGTATTGAGGACATAAGAGCGGGAAGTGAAAAAATTGCCAAGCTCTCATCACATCCATGTCAAAAATATGAAGAATTTTGGAACTGTAATTTTTACATGAGAGGAGACTACACGAATCCCAAAACATTTGAATTATTAAATGAGTTTATAGAATCTAAGTGGGGACAAGCTGTTAATCGCATATTTTATTATGCTATACCACCATCAGTTTATAAACCTGTTTCGTCATCTATCAAAGAATATTGTACTAACAAAAACCCTGATACGTGGACTCGATTGATCATTGAAAAACCGCTTGGACGAGATCTAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD079911             [                                                                                                                                                                                                                                                                                                                                          TACTTTTTACATGAGAGGAGACTACACGAATCCCAAAACATTTGAATTATTAAATGAGTTTATAGAATCTAAGTGGGGACAAGCTGTTAATCGCATATTTTATTATGCTATACCACCATCAGTTTATAAACCTGTTTCGTCATCTATCAAAGAATATTGTACTAACAAAAACCCTGATACGTGGACTCGATTGATCATTGAAAAACCGTTGGGA  AAAATTA AGTTATTNNNAGGGATGTGAATTGTGAATTAACTAAACTGTTTACAGAAGAACAGATTTATCGAATCGATCATTATTTGGGCAAAGAAATGGTTCAAAATCTATTAATTTTACGATTCTGTAATCAGGT C TTCAGTCCACTGTGGAATCGTGAAAATATTGATAATATTACAATATCATTTAAAGAACCATTCNGAACCGAAGGACGTGGTGGATATTNTGATCAATTT GAATTATTCGCGATGTCGTTCAAAATCACCTTTATCAGAATCTTTCATTGGNTAGCATGAAAAAACCTGTTTCAGTTATGCANATGATATACGTGATGAAAAGGTTCGTGTGCTTTCTAGCATTGAACCCTTAACAATAAACGACATTGTAATGGGACATACCTTTGCGATCCAATGGCACAAATCCCCCTGTTGGTTTTTTAACCAGAAGAAACCGCCTTTCCTAAAAATCCATACACCTCTTATGGTTTGGGTTGNNNNNTAAAAATNAGAANGGGAAAAGGGGTTCCAATTTTCCCGGCCTGTGGTTTAAAGTAGGTTTGGGAAAGAAAGATTACCTTTGTAGCCGATTTCCCCATTGTTGGAAAAAATTTTACCCGAGTTGGGGGGGCTTGNNNNNNNNNNNNNNNNNNNNCNNNAAGNANGNNGCNCTCTTNNNNNNNNNNGAACCATACTATACCCCCCNNNNNNNCCNNNNNNNNNNNNNNNNNAAGGCCCCTAAAAGAAAAACTCTGTGGGGGAAAAATGACCTCCTCGGGGGACCCCCAAAAAGGGGAAA]
[+] EMBL AW017354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ggATTTTACGACTCTGTTATCAGGT C TTCAGTCCACTGTGGAATCGTGAAAATATTGATAATATTACAATATCATTTAAAGAACCATTCGGAACCGAAGGACGTGGTGGATATTTTGATCAATTTGGAATTATTCGCGATGTCGTTCAAAATCACCTTATTCAGATTCTTTCATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]


>consensus_10237#0 TCTACCTTTTTCCGTAGTAGGTTATTAAGAAATGTCAGAAGTAAACGAATGCGAATGTGA AGAATTCTTGAACATTGTTAAGTTGTCTTTGGAGGAAGATAAAAGTCATGTTCATGTTCT TGTGATCATCGGAGCTTCTGGTGATTTGGCAAAGAAAAAGACTTATCCAACTTTATGGTG GTTGTTCCGTGATGGTCTGCTGCCTCCTCGAACTTACTTTGTTGGGTTCGCACGATCTGA TATTGGTATTGAGGACATAAGAGCGGGAAGTGAAAAAATTGCCAAGCTCTCATCACATCC ATGTCAAAAATATGAAGAATTTTGGAACTGTAATTTTTACATGAGAGGAGACTACACGAA TCCCAAAACATTTGAATTATTAAATGAGTTTATAGAATCTAAGTGGGGACAAGCTGTTAA TCGCATATTTTATTATGCTATACCACCATCAGTTTATAAACCTGTTTCGTCATCTATCAA AGAATATTGTACTAACAAAAACCCTGATACGTGGACTCGATTGATCATTGAAAAACCGTT TGGACGAGATTTAGAGTCATTCAATGAATTGAATTGTGAATTAACTAAACTGTTTACAGA AGAACAGATTTATCGAATCGATCATTATTTGGGCAAAGAAATGGTTCAAAATCTATTAAT TTTACGATTCTGTAATCAGGTCTTCAGTCCACTGTGGAATCGTGAAAATATTGATAATAT TACAATATCATTTAAAGAACCATTCNGAACCGAAGGACGTGGTGGATATTNTGATCAATT TGAATTATTCGCGATGTCGTTCAAAATCACCTTTATCAGAATCTTTCATTGGNTAGCATG AAAAAACCTGTTTCAGTTATGCANATGATATACGTGATGAAAAGGTTCGTGTGCTTTCTA GCATTGAACCCTTAACAATAAACGACATTGTAATGGGACATACCTTTGCGATCCAATGGC ACAAATCCCCCTGTTGGTTTTTTAACCAGAAGAAACCGCCTTTCCTAAAAATCCATACAC CTCTTATGGTTTGGGTTGNNNNNTAAAAATNAGAANGGGAAAAGGGGTTCCAATTTTCCC GGCCTGTGGTTTAAAGTAGGTTTGGGAAAGAAAGATTACCTTTGTAGCCGATTTCCCCAT TGTTGGAAAAAATTTTACCCGAGTTGGGGGGGCTTGNNNNNNNNNNNNNNNNNNNNCNNN AAGNANGNNGCNCTCTTNNNNNNNNNNGAACCATACTATACCCCCCNNNNNNNCCNNNNN NNNNNNNNNNNNAAGGCCCCTAAAAGAAAAACTCTGTGGGGGAAAAATGACCTCCTCGGG GGACCCCCAAAAAGGGGAAA



consensusID : consensus_10237#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1038
fasta sequence
                              [TACGAGGCCAANAATTTGGCACGAGGCGCGATGTCGTTCAAAATCACCTTATTCAGATTCTTTCATTGGTAGCAATGGAAAAACCTGTTTCAGTTAATGCAGATGATATACGTGATGAGAAGGTTCGTGTGCTTCGAAGCATTGAACCTTTAACAATAGACGACATTGTAATTGGACAATACGTTGCAGATCCAAATGCAACAAATCCACCTGCTTCGTTATCTTACACAGATGATCCGTCAGTTCCTAAAGATTCCATAACACCTACTTATGTATGTGCTGTGTTATATGTGAAAAGTGATCGTTGGAAAGGTGTTCCATTTATTCTCCGGGCAGGGAAAGCACTAAATGAACGTAAAGCAGAAGTCAGAGTTCAATTTAAAGAACCTCATATTCATCTTTTCGGTTCAAAAGAAGGTCTACCGCGTAATGAATTAGTTATACGTGTACAACCGGACGAAGCAGTTTATATTAAATTGAATGTGAAATCTCCTGGTATGAAATTTCAAACAGAAGAAACTGAATTAGACTTAACTTATGCTCATCGATATAAAGCCATAAAACTACCTGACGCTTATGAACGATTGATTCTCGATGTATTCTGTGGAGTTCAGACAAATTTTGTGCGTTCGGATGAACTACACGAAGCTTGGCGTATTTTAACACCAGTATTAAAATACTTGGAAGACAATAAAGTCAAA-CCATATC-CATACATTTATGGGAGTCGTAATGGACCGAAAGAAGCAGATATTTTGTGTAAAAAAGCAGGTTTTCAATACTCTGGTACATATGTTTGGAAATCAGGTTAAAGGATATTCATTCCATCAATTTCCGATAACTCAATCGATTATATAAAAGATCC-ACATGCTGTAACTTATTTGAATGCCTTGATAATTATGAACAGAACATTCGACTTATTTGTTTCTTTATAGCCAACTTGCTTTAAGATTTTATCGTAATAGCACTTTTGTAATAATACTGTCAAAACAAGCGATATACAAATATATAAATCTGTTTAAAAAAGATATATAACTCGAA]

[+] EMBL CD079777             [TACGAGGCCAANAATTTGGCACGAGGCGCGATGTCGTTCAAAATCACCTTATTCAGATTCTTTCATTGGTAGCAATGGAAAAACCTGTTTCAGTTAATGCAGATGATATACGTGATGAGAAGGTTCGTGTGCTTCGAAGCATTGAACCTTTAACAATAGACGACATTGTAATTGGACAATACGTTGCAGATCCAAATGCAACAAATCCACCTGCTTCGTTATCTTACACAGATGATCCGTCAGTTCCTAAAGATTCCATAACACCTACTTATGTATGTGCTGTGTTATATGTGAAAAGTGATCGTTGGAAAGGTGTTCCATTTATTCTCCGGGCAGGGAAAGCACTAAATGAACGTAAAGCAGAAGTCAGAGTTCAATTTAAAGAACCTCATATTCATCTTTTCGGTTCAAAAGAAGGTCTACCGCGTAATGAATTAGTTATACGTGTACAACCGGACGAAGCAGNNTATATTAAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD185582             [                                   GTTCAAAATCACCTTATTCAGATTCTTTCATTGGTAGCAATGGAAAAACCTGTTTCAGTTAATGCAGATGATATACGTGATGAGAAGGTTCGTGTGCTTCGAAGCATTGAACCTTTAACAATAGACGACATTGTAATTGGACAATACGTTGCAGATCCAAATGCAACAAATCCACCTGCTTCGTTATCTTACACAGATGATCCGTCAGTTCCTAAAGATTCCATAACACCTACTTATGTATGTGCTGTGTTATATGTGAAAAGTGATCGTTGGAAAGGTGTTCCATTTATTCTCCGGGCAGGGAAAGCACTAAATGAACGTAAAGCAGAAGTCAGAGTTCAATTTAAAGAACCTCATATTCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD185455             [                                   GTTCAAAATCACCTTATTCAGATTCTTTCATTGGTAGCAATGGAAAAACCTGTTTCAGTTAATGCAGATGATATACGTGATGAGAAGGTTCGTGTGCTTCGAAGCATTGAACCTTTAACAATAGACGACATTGTAATTGGACAATACGTTGCAGATCCAAATGCAACAAATCCACCTGCTTCGTTATCTTACACAGATGATCCGTCAGTTCCTAAAGATTCCATAACACCTACTTATGTATGTGCTGTGTTATATGTGAAAAGTGATCGTTGGAAAGGTGTTCCATTTATTCTCCGGGCAGGGAAAGCACTAAATGAACGTAAAGCAGAAGTCAGAGTTCAATTTAAAGAACCTCATATTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD079120             [                                                                                                                                                                                                                                     AGATGATCCGTCAGTTCCTAAAGATTCCATAACACCTACTTATGTATGTGCTGTGTTATATGTGAAAAGTGATCGTTGGAAAGGTGTTCCATTTATTCTCCGGGCAGGGAAAGCACTAAATGAACGTAAAGCAGAAGTCAGAGTTCAATTTAAAGAACCTCATATTCATCTTTTCGGTTCAAAAGAAGGTCTACCGCGTAATGAATTAGTTATACGTGTACAACCGGACGAAGCAGTTTATATTAAATTGAATGTGAAATCTCCTGGTATGAAATTTCAAACAGAAGAAACTGAATTAGACTTAACTTATGCTCATCGATATAAAGCCATAAAACTACCTGACGCTTATGAACGATTGATTCTCGATGTATTCTGTGGAGTTCAGACAAATTTTGTGCGTTCGGATGAACTACACGAAGCTTGGCGTATTTTAACACCAGTATTAAAATACTTGGAAGACAATAAAGTCAAA CCATATC CATACATTTATGGGAGTCGTAATGGACCGAAAGAAGCAGATATTTTGTGTAAAAAAGCAGGTTTTCAATACTCTGGTACATATGTTTGGAAATCAGGTTAAAGGATATTCATTCCATCAATTTCCGATAACTCAATCGATTATATAAAAGATCC ACATGCTGTAACTTATTTGAATGCCTT                                                                                                                                                     ]
[+] EMBL SMAA69197            [                                                                                                                                                                                                                                                                                                                                                                                                     CATATTCATCTTTTCGGTTCAAAAGAAGGTCTACCGCGTAATGAATTAGTTATACGTGTACAACCGGACGAAGCAGTTTATATTAAATTGAATGTGAAATCTCCTGGTATGAAATTTCAAACAGAAGAAACTGAATTAGACTTAACTTATGtct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD073572             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GACGAAGCAGTTTATATTAAATTGAATGTGAAATCTCCTGGTATGAAATTTCAAACAGAAGAAACTGAATTAGACTTAACTTATGCTCATCGATATAAAGCCATAAAACTACCTGACGCTTATGAACGATTGATTCTCGATGTATTCTGTGGAGTTCAGACAAATTTTGTGCGTTCGGATGAACTACACGAAGCTTGGCGTATTTTAACACCAGTATTAAAATACTTGGAAGACAATAAAGTCAAA CCATATC CATACATTTATGGGAGTCGTAATGGACCGAAAGAAGCAGATATTTTGTGTAAAAAAGCAGGTTTTCAATACTCTGGTACATATGTTTGGAAATCAGGTTAAAGGATATTCATTCCATCAATTTCCGATAACTCAATCGATTATATAAAAGATCC ACATGCTGTAACTTATTTGAATGCCTTGATAATTATGAACAGAACATTCGACTTATTTGTTTCTTTATAGCCAACTTGCTTTAAGATTTTATCGTAATAGCACTTTTGTAATAATACTGTCAAAACAAGCGATATACAAATATATAAATCTGTTTAAAAAAGATA           ]
[-] EMBL CD074035             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGCTTATGAACGATTGATTCTCGATGTATTCTGTGGAGTTCAGACAAATTTTGTGCGTTCGGATGAACTACACGAAGCTTGGCGTATTTTAACACCAGTATTAAAATACTTGGAAGACAATAAAGTCAAACCCACCTCTCA CCA TTATGGGAGTCGTAATGGACCGAAAGAAGCAGATATTTTGTGTAAAAAAGCAGGTTTTCAATACTCTGGTACATATGTTTGGAAATACGGGTAAAGGATATTCATTCCATCAATTTCCGATAACTCAATCGATTATATAAAAGATCC CCCCGCTGGAACTTATTTGAATGCCTTGATAATTATGAACAGAACATTCGACTTATTTGTTTCTTTATAGCCAACTTGCTTTAAGATTTTATCGTAATAGCACTTTTGTAATAATACTGTCAAAACAAGCGATATACAAATATATAAATCTGTTTAAAAAAGATA           ]
[-] EMBL CD074108             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGCAGATATTTTGTGTAAAAAAGCAGGTTTTCAATACTCTGGTACATATGTTTGGAAATCAGGTTAAAGGATATTCATTCCATCAATTTCCGATAACTCAATCGATTATATAAAAGATCCNCCACACCGCTNNNNATTTTTATAGCTTGATAATTATGAACAGGACATTCGACTTATTTGTTTCTTTAAAGCCAACTTGCTTTAAGATTTTATCGTAATAGCACTTTTGTAATAATACTGTCAAAACAAGCGATATACTAATATATAAATCTGTTTAAAAAAGATATATAACTCGAA]


>consensus_10237#1 TACGAGGCCAANAATTTGGCACGAGGCGCGATGTCGTTCAAAATCACCTTATTCAGATTC TTTCATTGGTAGCAATGGAAAAACCTGTTTCAGTTAATGCAGATGATATACGTGATGAGA AGGTTCGTGTGCTTCGAAGCATTGAACCTTTAACAATAGACGACATTGTAATTGGACAAT ACGTTGCAGATCCAAATGCAACAAATCCACCTGCTTCGTTATCTTACACAGATGATCCGT CAGTTCCTAAAGATTCCATAACACCTACTTATGTATGTGCTGTGTTATATGTGAAAAGTG ATCGTTGGAAAGGTGTTCCATTTATTCTCCGGGCAGGGAAAGCACTAAATGAACGTAAAG CAGAAGTCAGAGTTCAATTTAAAGAACCTCATATTCATCTTTTCGGTTCAAAAGAAGGTC TACCGCGTAATGAATTAGTTATACGTGTACAACCGGACGAAGCAGTTTATATTAAATTGA ATGTGAAATCTCCTGGTATGAAATTTCAAACAGAAGAAACTGAATTAGACTTAACTTATG CTCATCGATATAAAGCCATAAAACTACCTGACGCTTATGAACGATTGATTCTCGATGTAT TCTGTGGAGTTCAGACAAATTTTGTGCGTTCGGATGAACTACACGAAGCTTGGCGTATTT TAACACCAGTATTAAAATACTTGGAAGACAATAAAGTCAAACCATATCCATACATTTATG GGAGTCGTAATGGACCGAAAGAAGCAGATATTTTGTGTAAAAAAGCAGGTTTTCAATACT CTGGTACATATGTTTGGAAATCAGGTTAAAGGATATTCATTCCATCAATTTCCGATAACT CAATCGATTATATAAAAGATCCACATGCTGTAACTTATTTGAATGCCTTGATAATTATGA ACAGAACATTCGACTTATTTGTTTCTTTATAGCCAACTTGCTTTAAGATTTTATCGTAAT AGCACTTTTGTAATAATACTGTCAAAACAAGCGATATACAAATATATAAATCTGTTTAAA AAAGATATATAACTCGAA



consensusID : consensus_10237#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 209
fasta sequence
                              [GTTAAAGAACCATCCGGAACCGAAGGACGTGGTGGATATTTTGATCAATTGGGAATTATTCGCGATGTCGTTCAAAATCACCTTATTCAGATTCTTTCATTGGTAGCAATGGAAAAACCTGTTTCAGTTAATGCAGATGATATACGTGATGAGAAGGTTCGTGTGCTTCGAAGCATTGAACCTTTAACAATAGACAACGTTGTAATTGG]

[-] EMBL CD111708             [GTTAAAGAACCATCCGGAACCGAAGGACGTGGTGGATATTTTGATCAATTGGGAATTATTCGCGATGTCGTTCAAAATCACCTTATTCAGATTCTTTCATTGGTAGCAATGGAAAAACCTGTTTCAGTTAATGCAGATGATATACGTGATGAGAAGGTTCGTGTGCTTCGAAGCATTGAACCTTTAACAATAGACAACGTTGTAATTGG]


>consensus_10237#2 GTTAAAGAACCATCCGGAACCGAAGGACGTGGTGGATATTTTGATCAATTGGGAATTATT CGCGATGTCGTTCAAAATCACCTTATTCAGATTCTTTCATTGGTAGCAATGGAAAAACCT GTTTCAGTTAATGCAGATGATATACGTGATGAGAAGGTTCGTGTGCTTCGAAGCATTGAA CCTTTAACAATAGACAACGTTGTAATTGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10237#0      TCTACCTTTTTCCGTAGTAGGTTATTAAGAAATGTCAGAAGTAAACGAATGCGAATGTGA 60
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      ------------------------------------------------------------
                                                                                   

consensus_10237#0      AGAATTCTTGAACATTGTTAAGTTGTCTTTGGAGGAAGATAAAAGTCATGTTCATGTTCT 120
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      ------------------------------------------------------------
                                                                                   

consensus_10237#0      TGTGATCATCGGAGCTTCTGGTGATTTGGCAAAGAAAAAGACTTATCCAACTTTATGGTG 180
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      ------------------------------------------------------------
                                                                                   

consensus_10237#0      GTTGTTCCGTGATGGTCTGCTGCCTCCTCGAACTTACTTTGTTGGGTTCGCACGATCTGA 240
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      -------------------------------------------------------TACGA 5
                                                                                   

consensus_10237#0      TATTGGTATTGAGGACATAAGAGCGGGAAGTGAAAAAATTGCCAAGCTCTCATCACATCC 300
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      GGCCAANAATTTGGCACGAGGCGCGATGTCGTTCAAAATCACCTTATTCAGATTCTTTCA 65
                                                                                   

consensus_10237#0      ATGTCAAAAATATGAAGA---ATTTTGGA-ACTGTAATT--TTTACATGAGAGGAGACTA 354
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      TTGGTAGCAATGGAAAAACCTGTTTCAGTTAATGCAGATGATATACGTGATGAGAAGGTT 125
                                                                                   

consensus_10237#0      CACGAATCCCAAAACATTTGAATTATTAAATGAGTTTATAGAATCTAAGTGGG-GACAAG 413
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      CGTGTGCTTCGAAGCATTGAACCTTTAACAATAGACGACAT--TGTAATTGGACAATACG 183
                                                                                   

consensus_10237#0      CTGTTAATCGCATATTTTATTATGCTATAC-CACCATCAGTTTATAAACCTGTTTCGTCA 472
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      TTGCAGATC-CAAATGCAACAAATCCACCTGCTTCGTTATCTTACACAGATGATCCGTCA 242
                                                                                   

consensus_10237#0      TCTATCAAAGAATATTGTACTAACAAAAACCCTGATACGTGGACTCGATTGATCATTGAA 532
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      GTTCCTAAAGA---TTCCA-TAACACCTACTTATGTATGTG---CTGTGTTATATGTGAA 295
                                                                                   

consensus_10237#0      AAACCGT--TTGGACGAGATTTAGAGTCATTCAATGAATTGAATTGTGAATTAACTAAAC 590
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      AAGTGATCGTTGGAAAGGTGTTCCATTTATTCTCCGGGCAGGGAAA-GCACTAAATGAAC 354
                                                                                   

consensus_10237#0      TGTTTACAGAAGAACAGATTTATCGAATCGATCATTATTTGGGCAAAGAAATGGTTCAAA 650
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      GTAAAGCAGAAGTCAGAGTTCAATTTAAAGAACCTCATATT--CATCTTTTCGGTTCAAA 412
                                                                                   

consensus_10237#0      ATCTATTAATTTTACGATTCTGTAATCAGGTCTTCAGTCCACTGTGGAATCGTGAAA--- 707
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      A----GAAGGTCTACCGCGTAATGAATTAGTTATACGTGTACAACCGGACGAAGCAGTTT 468
                                                                                   

consensus_10237#0      ATATTGATAATATTACAATATCATTTAAAGAACCATTCNGAACCGAAGGACGTGGTGGAT 767
consensus_10237#2      -----------------------GTTAAAGAACCATCCGGAACCGAAGGACGTGGTGGAT 37
consensus_10237#1      ATATTAAATTGAATGTGAAATCTCCTGGTATGAAATTTCAAACAGAAGAAACTGA----- 523
                                                *        **    *** **** *  **      

consensus_10237#0      ATTNTGATCAATTTG-AATTATTCGCGATGTCGTTCAAAATCACCTTTATCAGAATCTTT 826
consensus_10237#2      ATTTTGATCAATTGGGAATTATTCGCGATGTCGTTCAAAATCACCTTATTCAGATTCTTT 97
consensus_10237#1      ATTAGACTTAACTTATGCTCAT-CGATATAAAGCCATAAAACTACCTGACGCTTATGAAC 582
                       ***    * ** *     * ** **  **   *    *** *  * *        *    

consensus_10237#0      CATTGGNTAGCATGAAAAAACCTGTTTCAGTTA-TGCANATGATATACGTGATGAAAAGG 885
consensus_10237#2      CATTGGTAGCAATGGAAAAACCTGTTTCAGTTAATGCAGATGATATACGTGATGAGAAGG 157
consensus_10237#1      GATTGATT--CTCGATGTATTCTGTGG-AGTTCAGACAAATTTTGTGCGTTCGGATGAAC 639
                        ****        *    *  ****   ****    ** **  * * ***   **  *  

consensus_10237#0      TTCGTGTGCTTTCTAGCATTGAACCCTTAACAATAAACGACATTGTAATGGGACATACCT 945
consensus_10237#2      TTCGTGTGCTTCGAAGCATTGAACCTTTAACAATAGACAACGTTGTAATTGG-------- 209
consensus_10237#1      TACACGAAGCTTGGCGTATTTTAACACCAGTATTAAAATAC-TTGGAAGACAATAAAGT- 697
                       * *  *    *    * ***  * *   *  * ** *  ** *** **            

consensus_10237#0      TTGCGATCCAATGGCACAAATCCCCCTGTTGGTTTTTTAACCAGAAGAAACCGCC-TTTC 1004
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      ---CAAACCATATCCATACATTTATGGGAGTCGTAATGGACCGAAAGAAGCAGATATTTT 754
                                                                                   

consensus_10237#0      CTAAAAATCCATACACCTCTTATGGTTTGGGTTGNNNNNTAAAAATNAGAANGGGAAAAG 1064
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      GTGTAAAAAAGCAGGTTTTCAATACTCTGGTACATATGTTTGGAAAT----CAGGTTAAA 810
                                                                                   

consensus_10237#0      GGGTTCCAATTTTCCCGGCCTGTGGTTTAAAGTAGGTTTGGGAAAGAAAGATTACCTTTG 1124
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      GGATATTCATTCCATCAATTTCCGAT---AACTCAATCGATTATATAAAAGATCCACATG 867
                                                                                   

consensus_10237#0      TAGCCGATTTCCCCATTGTTGGAAAAAATTTTACCCGAGTTGGGGGGGCTTGNNNNNNNN 1184
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      CTGTAACTTATTTGAATGCCTTGATAATTATGAACAGAACATTCGACTTATTTGTTTCTT 927
                                                                                   

consensus_10237#0      NNNNNNNNNNNNCNNNAAGNANGNNGCNCTCTTNNNNNNNNNNGAACCATACTATACCCC 1244
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      TATAGCCAACTTGCTTTAAGATTTTATCGTAATAGCACTTTTGTAATAATACTGT----- 982
                                                                                   

consensus_10237#0      CCNNNNNNNCCNNNNNNNNNNNNNNNNNAAGGCCCCTAAAAGAAAAACTCTGTGGGGGAA 1304
consensus_10237#2      ------------------------------------------------------------
consensus_10237#1      CAAAACAAGCGATATACAAATATATAAATCTGTTTAAAAAAGATATATAACTCGAA---- 1038
                                                                                   

consensus_10237#0      AAATGACCTCCTCGGGGGACCCCCAAAAAGGGGAAA 1340
consensus_10237#2      ------------------------------------
consensus_10237#1      ------------------------------------
                                                           




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)