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Schistosoma mansoni
cluster # 10244 cluster # 10244       Sequences # 14       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10244#0 length = 1550 sequences # 8  
consensus_10244#1 length = 395 sequences # 1  
consensus_10244#2 length = 354 sequences # 1  
consensus_10244#3 length = 314 sequences # 3  
consensus_10244#4 length = 277 sequences # 1  

consensusID : consensus_10244#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1550
fasta sequence
                              [AAACATTCCTGGTAGTGGCTCTTTACACGTTGCCATGTGAAAGTATTTCGAGAGGGATAGCTAATTCTTTCCACCCTCTGCTGTACCAAAGCATTCGGGAGGCTTCCGATAGATTACGGGTAATAATACTGATTACATGTATACAAACAACAGAACATATTACAAAAGATTCTTTTAAAGAAGACTATTGGATTCTCTTAAAAAAAAACAAGAAAAACAATCAAACCAAACCAAAGCAAACCAAAACTAATCAAGCTTATAAGCAAATCAATTATTTTCTATTACAAAACAAAACAAACAAACAACAATTGAAATATTTGGCAATGAATATAAAGAGAGAGATAATTCATTATGGAATATATTTTAATTAACAAAATACATAAGGGGTTCATGGAACAAGACTAGATAGTAGTAGTAGTACATATGTGGAAAGTATAATAAAGAAAGAAAAAAATCTCAAATCGATTATCATAACAAGAACTCTTATATATCAAGTGTAATGGTACAAAAACCGAGGAGGGAGAAGTATGAAAACAATCCTTTATAATTTGTGTCTTATAGCGTCATTTGGGAGATCCAAGATTATCCAAGATTATTGTTGTTTATTATTACAAAGGGACATGATAAAATAGATAAGAAACAGATTCACCATTATGTGTTCGACGGATAGCTTCAGCCAACATAGTACTTACATCAATACACTGAATTTTAGGAGCTTTCCGCATATTTTCTTCTTGTGGCAAAGTATTTGTTACAACGACAGCTTCAAAAGCTGACTTATTAATTCGCTCCAAAGCTG-GACCTGGAGATATACCATGAGTACAGATAGCGTAAACACGCTCAGCTCCAGCTTCAATCAATTTGTCTGCTGCAGTACATATCGTTCCACATGTATCTGCCATATCATCTACCAGGATAGCAACACGGTTATTTACATCTCCAACAAGAACCATACGATCTACTTCGTTTGCACGTTTTCGTTCTTTATGAATCAAGGCAAAATCAACATTTAACTGATCTGCGATTGAAGTTACTCTTTTAGCGCCACCAGCGTCCGGACTAACAATACAACAGTCTTTCCATTCTGGTATATTTGTTTTGACCCATTTGATAACTGCAGGCTCAGCATATAAATTATCAACAGGAATATCAAAAAATCCTTGAATTTGACTGGCATGTAAGTCCATTGTTATTATATGATCAGCTCCGGCAACTGACAGCATATTAGCTACTAATTTTGCTGAGATCGGAGCACGTGATTTATCCTTTTTGTCTTGCCTTGCATATGGGAAACAGGGGATGACTGCGGACACTCGGGAACTTGAAGCGATCTTACAGGCGCTAATCATTATGAGTAGTTCCATAAGGTTGTCATTAACTTCTCCACCACCAGTTTGTATTATATAAACGTCTTCCCCGCGAACTGACTCCTCAACCTCAACACTTGTCTCCTGATTACTGAATTTTTTGGAAGTAACTCTACCTAATCGACAGCCAATACGGTCAGCTATCTTTTGAGCCAGGCCTCGTGACGAATTTTGGCCTGCGAG]

[+] EMBL CD178130             [AAACATTCCTGGTAGTGGCTCTTTACACGTTGCCATGTGAAAGTATTTCGAGAGGGATAGCTAATTCTTTCCACCCTCTGCTGTACCAAAGCATTCGGGAGGCTTCCGATAGATTACGGGTAATAATACTGATTACATGTATACAAACAACAGAACATATTACAAAAGATTCTTTTAAAGAAGACTATTGGATTCTCTTAAAAAAAAACAAGAAAAACAATCAAACCAAACCAAAGCAAACCAAAACTAATCAAGCTTATAAGCAAATCAATTATTTTCTATTACAAAACAAAACAAACAAACAACAATTGAAATATTTGGCAATGAATATAAAGAGAGAGATAATTCATTATGGAATATATTTTAATTAACAAAATACATAAGGGGTTCATGGAACAAGACTAGATAGTAGTAGTAGTACATATGTGGAAAGTATAATAAAGAAAGAAAAAAATCTCAAATCGATTATCATAACAAGAACTCTTATATATCAAGTGTAATGGTACAAAAACCGAGGAGGGAGAAGTATGAAAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD178131             [agACATTCCTGGTAGTGGCTCTTTACACGTTGCCATATGAAAGTATTTCGAGAGGGATAGCTAATTCTTTCCACCCTCTGCTGTACCAAAGCATTCGGGAGGCTTCCGATAGATTACGGGTAATAATACTGATTACATGTATACAAACAACAGAACATATTACAAAAGATTCTTTTAAAGAAGACTATTGGATTCTCTTAAAAAAAAACAAGAAAAACAATCAAACCAAACCAAAGCAAACCAAAACTAATCAAGCTTATAAGCAAATCAATTATTTTCTATTACAAAACAAAACAAACAAACAACAATTGAAATATTTGGCAATGAATATAAAGAGAGAGATAATTCATTATGGAATATATTTTAATTAACAAAATACATAAGGGGTTCATGGAACAAGACTAGATAGTAGTAGTAGTACATATGTGGAAAGTATAATAAAGAAAGAAAAAAATCTCAAATCGATTATCATAACAAGAACTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD168400             [                                                                                                                                                                                                                                                                                                                                                                           TTAATTAACAAAATACATAAGGGGTTCATGGAACAAGACTAGATAGTAGTAGTAGTACATATGTGGAAAGTATAATAAAGAAAGAAAAAAATCTCAAATCGATTATCATAACAAGAACTCTTATATATCAAGTGTAATGGTACAAAAACTGAAGGGGGAGAAGTATGAAAACAATCCTTTATAATTTGTGTCTTATAGCGTCATTTGGGAGATCCAAGATTATCCAAGATTATTGTTGTTTATTATTACAAAGGGACATGATAAAATAGATAAGAAACAGATTCACCATTATGTGTTCGACGGATAGCTTCAGCCAACATAGTACTTACATCAATACACTGAATTTTAGGAGCTTTCCGCATATTTTCTTCTTGTGGCAAAGTATTTGTTACAACGACAGCTTCAAAAGCTGACTTATTAATTCGCTCCAAAGCTG GACCTGGAGATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD190681             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TATTTGTTACAACGACAGCTTCAAAAGCTGACTTATTAATTCGCTCCAAAGCTGNGACCTGAAAATATACCATGAGTACAGATAGCGTAAACACGCTCAGCTCCAGCTTCAATCAATTTGTCTGCTGCAGTACATATCGTTCCACATGTATCTGCCATATCATCTACCAGGATAGCAACACGGTTATTTACATCTCCAACAAGAACCATACGATCTACTTCGTTTGCACGTTTTCGTTCTTTATGAATCAAGGCAAAATCAACATTTAACTGATCTGCGATTGAAGTTACTCTTTTAGCGCCACCAGCGTCCGGACTAACAATACAACAGTCTTTCCATTCTGGTATATTTGTTTTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD062130             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATGAGTACAGATAGCGTAAACACGCTCAGCTCCAGCTTCAATCAATTTGTCTGCTGCAGTACATATCGTTCCACATGTATCTGCCATATCATCTACCAGGATAGCAACACGGTTATTTACATCTCCAACAAGAACCATACGATCTACTTCGTTTGCACGTTTTCGTTCTTTAGGAATCAAGGCAAAATCAACATTTAACTGATCTGCGATTGAAGTTACTCTTTTAGCGCCACCAGCGTCCGGACTAACAATACAACAGTCTTTCCATTCTGGTATATTTGTTTTGACCCATTTGATAACTGCAGGCTCAGCATATAAATTATCAACAGGAATATCAAAAAATCCTTGAATTTGACTGGCATGTAAGTCCATTGTTATTATATGATCAGCTCCGGCAACTGACAGCATATTAGCTACTAATTTTGCTGAGATCGGAGCACGTGATTTATCCTTTTTGTCTTGCCTTGCATATGGGAAACA                                                                                                                                                                                                                                                               ]
[+] EMBL CD136228             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCCAACAAGAACCATACGATCTACTTCGTTTGCACGTTTTCGTTCTTTATGAATCAAGGCAAAATCAACATTTAACTGATCTGCGATTGAAGTTACTCTTTTAGCGCCACCAGCGTCCGGACTAACAATACAACAGTCTTTCCATTCTGGTAgtagtag                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD186669             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTTCGTTTGCACGTTTTCGTTCTTTATGAATCAAGGCAAAATCAACATTTAACTGATCTGCGATTGAAGTTACTCTTTTAGCGCCACCAGCGTCCGGACTAACAATACAACAGTCTTTCCATTCTGGTATATTTGTTTTGACCCATTTGATAACTGCAGGCTCAGCATATAAATTATCAACAGGAATATCAAAAAATCCTTGAATTTGACTGGCATGTAAGTCCATTGTTATTATATGATCAGCTCCGGCAACTGACAGCATATTAGCTACTAATTTTGCTGAGATCGGAGCACGTGATTTATCCTTTTTGTCTTGCCTTGCATATGGGAAACAGGGGATGACTGCGGAC                                                                                                                                                                                                                                               ]
[-] EMBL CD078231             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCGGAGCACGTGATTTATCCTTTTTGTCTTGCCTTGCATATGGGAAACAGGGGATGACTGCGGACACTCGGGAACTTGAAGCGATCTTACAGGCGCTAATCATTATGAGTAGTTCCATAAGGTTGTCATTAACTTCTCCACCACCAGTTTGTATTATATAAACGTCTTCCCCGCGAACTGACTCCTCAACCTCAACACTTGTCTCCTGATTACTGAATTTTTTGGAAGTAACTCTACCTAATCGACAGCCAATACGGTCAGCTATCTTTTGAGCCAGGCCTCGTGACGAATTTTGGCCTGCGAG]


>consensus_10244#0 AAACATTCCTGGTAGTGGCTCTTTACACGTTGCCATGTGAAAGTATTTCGAGAGGGATAG CTAATTCTTTCCACCCTCTGCTGTACCAAAGCATTCGGGAGGCTTCCGATAGATTACGGG TAATAATACTGATTACATGTATACAAACAACAGAACATATTACAAAAGATTCTTTTAAAG AAGACTATTGGATTCTCTTAAAAAAAAACAAGAAAAACAATCAAACCAAACCAAAGCAAA CCAAAACTAATCAAGCTTATAAGCAAATCAATTATTTTCTATTACAAAACAAAACAAACA AACAACAATTGAAATATTTGGCAATGAATATAAAGAGAGAGATAATTCATTATGGAATAT ATTTTAATTAACAAAATACATAAGGGGTTCATGGAACAAGACTAGATAGTAGTAGTAGTA CATATGTGGAAAGTATAATAAAGAAAGAAAAAAATCTCAAATCGATTATCATAACAAGAA CTCTTATATATCAAGTGTAATGGTACAAAAACCGAGGAGGGAGAAGTATGAAAACAATCC TTTATAATTTGTGTCTTATAGCGTCATTTGGGAGATCCAAGATTATCCAAGATTATTGTT GTTTATTATTACAAAGGGACATGATAAAATAGATAAGAAACAGATTCACCATTATGTGTT CGACGGATAGCTTCAGCCAACATAGTACTTACATCAATACACTGAATTTTAGGAGCTTTC CGCATATTTTCTTCTTGTGGCAAAGTATTTGTTACAACGACAGCTTCAAAAGCTGACTTA TTAATTCGCTCCAAAGCTGGACCTGGAGATATACCATGAGTACAGATAGCGTAAACACGC TCAGCTCCAGCTTCAATCAATTTGTCTGCTGCAGTACATATCGTTCCACATGTATCTGCC ATATCATCTACCAGGATAGCAACACGGTTATTTACATCTCCAACAAGAACCATACGATCT ACTTCGTTTGCACGTTTTCGTTCTTTATGAATCAAGGCAAAATCAACATTTAACTGATCT GCGATTGAAGTTACTCTTTTAGCGCCACCAGCGTCCGGACTAACAATACAACAGTCTTTC CATTCTGGTATATTTGTTTTGACCCATTTGATAACTGCAGGCTCAGCATATAAATTATCA ACAGGAATATCAAAAAATCCTTGAATTTGACTGGCATGTAAGTCCATTGTTATTATATGA TCAGCTCCGGCAACTGACAGCATATTAGCTACTAATTTTGCTGAGATCGGAGCACGTGAT TTATCCTTTTTGTCTTGCCTTGCATATGGGAAACAGGGGATGACTGCGGACACTCGGGAA CTTGAAGCGATCTTACAGGCGCTAATCATTATGAGTAGTTCCATAAGGTTGTCATTAACT TCTCCACCACCAGTTTGTATTATATAAACGTCTTCCCCGCGAACTGACTCCTCAACCTCA ACACTTGTCTCCTGATTACTGAATTTTTTGGAAGTAACTCTACCTAATCGACAGCCAATA CGGTCAGCTATCTTTTGAGCCAGGCCTCGTGACGAATTTTGGCCTGCGAG



consensusID : consensus_10244#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 395
fasta sequence
                              [ACAGTTCAGTTAAATGTTGATTTTGCCTTGATTCATAAGAACACATCTACTTCGTTTGCACGTTTTCGTTCTTTATGAATCAAGGCAAAATCAACATTTAACTGATCTGCGATTGAAGTTACTCTTTTAGCGCCACCAGCGTCCGGACTAACAATGCAACAGTCTTTCCATTCTGGTATATTTGTTTTGACCCATTTGATAACTGCAGGCTCAGCATATAAATTATCAACAGGAATATCAAAAAATCCTTGAATTTGACTGGCATGTAAGTCCATTGTTATTATATGATCAGCTCCGGCAACTGACAGCATATTAGCTACTAATTTTGCTGAGAATCGGAGCACGTGATTTATCCTTTTTGTCTTGCCTTGCATATGGGGACACAGGGGATGACT]

[+] EMBL CD111738             [ACAGTTCAGTTAAATGTTGATTTTGCCTTGATTCATAAGAACACATCTACTTCGTTTGCACGTTTTCGTTCTTTATGAATCAAGGCAAAATCAACATTTAACTGATCTGCGATTGAAGTTACTCTTTTAGCGCCACCAGCGTCCGGACTAACAATGCAACAGTCTTTCCATTCTGGTATATTTGTTTTGACCCATTTGATAACTGCAGGCTCAGCATATAAATTATCAACAGGAATATCAAAAAATCCTTGAATTTGACTGGCATGTAAGTCCATTGTTATTATATGATCAGCTCCGGCAACTGACAGCATATTAGCTACTAATTTTGCTGAGAATCGGAGCACGTGATTTATCCTTTTTGTCTTGCCTTGCATATGGGGACACAGGGGATGACT]


>consensus_10244#1 ACAGTTCAGTTAAATGTTGATTTTGCCTTGATTCATAAGAACACATCTACTTCGTTTGCA CGTTTTCGTTCTTTATGAATCAAGGCAAAATCAACATTTAACTGATCTGCGATTGAAGTT ACTCTTTTAGCGCCACCAGCGTCCGGACTAACAATGCAACAGTCTTTCCATTCTGGTATA TTTGTTTTGACCCATTTGATAACTGCAGGCTCAGCATATAAATTATCAACAGGAATATCA AAAAATCCTTGAATTTGACTGGCATGTAAGTCCATTGTTATTATATGATCAGCTCCGGCA ACTGACAGCATATTAGCTACTAATTTTGCTGAGAATCGGAGCACGTGATTTATCCTTTTT GTCTTGCCTTGCATATGGGGACACAGGGGATGACT



consensusID : consensus_10244#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 354
fasta sequence
                              [TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCATTATGGAATATATTTTAATTAACAAAATACATAAGGGGTTCATGGAACAAGACTAGATAGTAGTAGTAGTACATATGTGGAAAGTATAATAAAGAAAGAAAAAAATCTCAAATCGATTATCATAACAAGAACTCTTATATATCAAGTGTAATGGTACAAAAACTGAAGGGGGAGAAGTATGAAAACAATCCTTTATAATTTGTGTCTTATAGCGTCATTTGGGAGATCCAAGATTATCCAAGATTATTGTTGTTTATTATTACAAAGGGACATGATTAAATAGATAAG]

[+] EMBL AI975720             [TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCATTATGGAATATATTTTAATTAACAAAATACATAAGGGGTTCATGGAACAAGACTAGATAGTAGTAGTAGTACATATGTGGAAAGTATAATAAAGAAAGAAAAAAATCTCAAATCGATTATCATAACAAGAACTCTTATATATCAAGTGTAATGGTACAAAAACTGAAGGGGGAGAAGTATGAAAACAATCCTTTATAATTTGTGTCTTATAGCGTCATTTGGGAGATCCAAGATTATCCAAGATTATTGTTGTTTATTATTACAAAGGGACATGATTAAATAGATAAG]


>consensus_10244#2 TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTT AATTCATTATGGAATATATTTTAATTAACAAAATACATAAGGGGTTCATGGAACAAGACT AGATAGTAGTAGTAGTACATATGTGGAAAGTATAATAAAGAAAGAAAAAAATCTCAAATC GATTATCATAACAAGAACTCTTATATATCAAGTGTAATGGTACAAAAACTGAAGGGGGAG AAGTATGAAAACAATCCTTTATAATTTGTGTCTTATAGCGTCATTTGGGAGATCCAAGAT TATCCAAGATTATTGTTGTTTATTATTACAAAGGGACATGATTAAATAGATAAG



consensusID : consensus_10244#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 314
fasta sequence
                              [GAACTTGAAGCGATCTTACATGCGTTAATCATTATGAGTAGTTCCATAAGGTTGTCATTAACTTCTCCACCACCAGTTTGTATTATATAAACGTCTTCCCCGCGAACTGACTCCTCAACCTCAACACTTGTCTCCTGATTACTGAATTTTTTGGAAGTAACTCTACCTAATCGACAGCCAATACGGTCAGCTATCTTTTGAGCCAGGTCTCGATTTGAACTACCAGAAAACACCTTTATGTTAGGCATTGACGTGAATTTGTTTGTGAACCTCGAGGAGCAATGTTGGAATCACCGCGCGTTGAAGGTAACCTC]

[+] EMBL CD095371             [GAACTTGAAGCGATCTTACATGCGTTAATCATTATGAGTAGTTCCATAAGGTTGTCATTAACTTCTCCACCACCAGTTTGTATTATATAAACGTCTTCCCCGCGAACTGACTCCTCAACCTCAACACTTGTCTCCTGATTACTGAATTTTTTGGAAGTAACTCTACCTAATCGACAGCCAATACGGTCAGCTATCTTTTGAGCCAGGTCTCGATTTGAACTACCAGAAAACACCTTTATGTTAGGCATTGACGTGAATTTGTTTGTGAACCTCGAGGAGCAATGTTGGAATCACCGCGCGTTGAAGGTAACCTC]
[-] EMBL CD185769             [           GATCTTACAGGCGCTAATCATTATGAGTAGTTCCATAAGGTTGTCATTAACTTCTCCACCACCAGTTTGTATTATATAAACGTCTTCCCCGCGAACTGACTCCTCAACCTCAACACTTGTCTCCTGATTACTGAATTTTTTGGAAGTAACTCTACCTAATCGACAGCCAATACGGTCAGCTATCTTTTGAGCCAGGTCTCGATTTGAACTACCAGAAAACACCTTTATGTTAGGCATTGACGTGAATTTGTTTGTGAACCTCGAGGAGCAATG                              ]
[+] EMBL CD161426             [                                                               TCTCCACCACCAGTTTGTATTATATAAACGTCTTCCCCGCGAACTGACTCCTCAACCTCAACACTTGTCTCCTGATTACTGAATTTTTTGGAAGTAACTCTACCTAATCGACAGCCAATACGGTCAGCTATCTTTTGAGCCAGGTCTCGATTTGAACTACCAGAAAACACCTTTATGTTAGGCATTGACGTGAATTTGTTTGTGAACCTCGAGGAGCAATGTTGGAATCACCGCGCGTTGAAGGTAACCTC]


>consensus_10244#3 GAACTTGAAGCGATCTTACATGCGTTAATCATTATGAGTAGTTCCATAAGGTTGTCATTA ACTTCTCCACCACCAGTTTGTATTATATAAACGTCTTCCCCGCGAACTGACTCCTCAACC TCAACACTTGTCTCCTGATTACTGAATTTTTTGGAAGTAACTCTACCTAATCGACAGCCA ATACGGTCAGCTATCTTTTGAGCCAGGTCTCGATTTGAACTACCAGAAAACACCTTTATG TTAGGCATTGACGTGAATTTGTTTGTGAACCTCGAGGAGCAATGTTGGAATCACCGCGCG TTGAAGGTAACCTC



consensusID : consensus_10244#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 277
fasta sequence
                              [GCGGGNAATTCGATTACTGCGAACCGGCTTCTTGTGGCAAAGTATTTGTTACAACGACAGCTTCAAAAGCTGACTTATTAATTCGCTCCAAAGCTGGACCTGAAAATATACCATGAGTGCAGATAGCGTAAACACGCTCAGCTCCAGCTTCAATCAATTTGTCTGCTGCAGTACATATCGTTCCACATGTATCTGCCATATCATCTACCAGGATAGCAACACGGTTATTTACATCTCCAACAAGAACCATACGATCTACTTCGTTTGCACGTTTTCG]

[+] EMBL CD130690             [GCGGGNAATTCGATTACTGCGAACCGGCTTCTTGTGGCAAAGTATTTGTTACAACGACAGCTTCAAAAGCTGACTTATTAATTCGCTCCAAAGCTGGACCTGAAAATATACCATGAGTGCAGATAGCGTAAACACGCTCAGCTCCAGCTTCAATCAATTTGTCTGCTGCAGTACATATCGTTCCACATGTATCTGCCATATCATCTACCAGGATAGCAACACGGTTATTTACATCTCCAACAAGAACCATACGATCTACTTCGTTTGCACGTTTTCG]


>consensus_10244#4 GCGGGNAATTCGATTACTGCGAACCGGCTTCTTGTGGCAAAGTATTTGTTACAACGACAG CTTCAAAAGCTGACTTATTAATTCGCTCCAAAGCTGGACCTGAAAATATACCATGAGTGC AGATAGCGTAAACACGCTCAGCTCCAGCTTCAATCAATTTGTCTGCTGCAGTACATATCG TTCCACATGTATCTGCCATATCATCTACCAGGATAGCAACACGGTTATTTACATCTCCAA CAAGAACCATACGATCTACTTCGTTTGCACGTTTTCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      AAACATTCCTGGTAGTGGCTCTTTACACGTTGCCATGTGAAAGTATTTCGAGAGGGATAG 60
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      CTAATTCTTTCCACCCTCTGCTGTACCAAAGCATTCGGGAGGCTTCCGATAGATTACGGG 120
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      TAATAATACTGATTACATGTATACAAACAACAGAACATATTACAAAAGATTCTTTTAAAG 180
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      AAGACTATTGGATTCTCTTAAAAAAAAACAAGAAAAACAATCAAACCAAACCAAAGCAAA 240
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      CCAAAACTAATCAAGCTTATAAGCAAATCAATTATTTTCTATTACAAAACAAAACAAACA 300
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      AACAACAATTGAAATATTTGGCAATGAATATAAAGAGAGAGATAATTCATTATGGAATAT 360
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      ATTTTAATTAACAAAATACATAAGGGGTTCATGGAACAAGACTAGATAGTAGTAGTAGTA 420
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      CATATGTGGAAAGTATAATAAAGAAAGAAAAAAATCTCAAATCGATTATCATAACAAGAA 480
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      CTCTTATATATCAAGTGTAATGGTACAAAAACCGAGGAGGGAGAAGTATGAAAACAATCC 540
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      TTTATAATTTGTGTCTTATAGCGTCATTTGGGAGATCCAAGATTATCCAAGATTATTGTT 600
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      GTTTATTATTACAAAGGGACATGATAAAATAGATAAGAAACAGATTCACCATTATGTGTT 660
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      CGACGGATAGCTTCAGCCAACATAGTACTTACATCAATACACTGAATTTTAGGAGCTTTC 720
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      CGCATATTTTCTTCTTGTGGCAAAGTATTTGTTACAACGACAGCTTCAAAAGCTGACTTA 780
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      TTAATTCGCTCCAAAGCTGGACCTGGAGATATACCATGAGTACAGATAGCGTAAACACGC 840
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      TCAGCTCCAGCTTCAATCAATTTGTCTGCTGCAGTACATATCGTTCCACATGTATCTGCC 900
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------TACGCAGTACGGTAATGCAGCTGCATGGCATG-TTT 35
consensus_10244#3      ----------------------------------GAACTTGAAGCGATCTTACATG-CGT 25
consensus_10244#1      -----------ACAGTTCAGTTAAATGTTGATTTTGCCTTGATTCATAAGAACACA-TCT 48
consensus_10244#0      ATATCATCTACCAGGATAGCAACACGGTTATTTACATCTCCAACAAGAACCATACGATCT 960
consensus_10244#4      -------------------------------------------------GCGGGNAATTC 11
                                                                                   

consensus_10244#2      TTTTTTTTTTTTTTTTTTTTTTTTTAAT---TCATTATGGAATATATT-TTAATTAACAA 91
consensus_10244#3      TAATCATTATGAGTAGTTCCATAAGGTTG--TCATTAACTTCTCCACCACCAGTTTGTAT 83
consensus_10244#1      ACTTCGTTTGCACGTTTTCGTTCTTTATGAATCAAGGCAAAATCAACATTTAACTGATCT 108
consensus_10244#0      ACTTCGTTTGCACGTTTTCGTTCTTTATGAATCAAGGCAAAATCAACATTTAACTGATCT 1020
consensus_10244#4      GATTACTGCGAACCGGCTTCTTGTGGCAAAGTATTTGTTACAACGACAGCTTCAAAAGCT 71
                          *  *          *   *         *             *              

consensus_10244#2      AATACATAAGGGGTTCATGGAACAAGACTAGATAGTAGTAGTAGTACATATGTGGAAAGT 151
consensus_10244#3      TATATAAACGTCTTCCCCGCGAACTGACTCCTCAACCTCAACACTTGTCTCCTGATTACT 143
consensus_10244#1      GCGATTGAAGTTACTCTTTTAGCGCCACCAG-CGTCCGGACTAACAATGCAACAGTCTTT 167
consensus_10244#0      GCGATTGAAGTTACTCTTTTAGCGCCACCAG-CGTCCGGACTAACAATACAACAGTCTTT 1079
consensus_10244#4      GACTTATTAATTCGCTCCAAAGCTGGACCTG-AAAATATACCATGAGTGCAGATAGCGTA 130
                                                 **           *  *                 

consensus_10244#2      ATAATAAAGAAAGAAAAAAAT-CTCAAATCGATTATCATA-ACAAGAACTCTTATATATC 209
consensus_10244#3      GAATTTTTTGGAAGTAACTCT-ACCTAATCGACAGCCA---ATACGGTCAGCTATCTTTT 199
consensus_10244#1      CCATTCTGGTATATTTGTTTTGACCCATTTGATAACTGCAGGCTCAGCATATAAATTATC 227
consensus_10244#0      CCATTCTGGTATATTTGTTTTGACCCATTTGATAACTGCAGGCTCAGCATATAAATTATC 1139
consensus_10244#4      AACACGCTCAGCTCCAGCTTCAATCAATTTGTCTGCTGCA-GTACATATCGTTCCACATG 189
                                               * * * *                           * 

consensus_10244#2      AAGTGTAATGGTACAAAAAC-TGAAGGGGGAGAAGTATGAAAAC-----AATCCTTTATA 263
consensus_10244#3      GAG----------CCAGGTC-TCGATTTGAACTACCA-GAAAAC-----A--CCTTTATG 240
consensus_10244#1      AACAGGAATATCAAAAAATCCTTGAATTTGACTGGCATGTAAGTCCATTGTTATTATATG 287
consensus_10244#0      AACAGGAATATCAAAAAATCCTTGAATTTGACTGGCATGTAAGTCCATTGTTATTATATG 1199
consensus_10244#4      TATC-------TGCCATATCATCTACCAGGATAGCAACACGGTTATTTACATCTCCAACA 242
                        *             *   * *  *     *     *                    *  

consensus_10244#2      ATTTGTGTCT-TATAGCGTCATTTGGGAGATCCAAGATTATCCAAGATTATTGTTGTTTA 322
consensus_10244#3      TTAGGCATTGACGTGAATTTGTTTGTGAACCTCGAGGAG---CAATGTTGGAATCACCGC 297
consensus_10244#1      ATCAGCTCCGGCAACTGACAGCATATTAGCTACTAATTTTGCTGAGAATCGGAGCACGTG 347
consensus_10244#0      ATCAGCTCCGGCAACTGACAGCATATTAGCTACTAATTTTGCTGAGATCGGAG-CACGTG 1258
consensus_10244#4      AGAACCATACGATCTACTTCGTTTGCACGTTTTCG------------------------- 277
                                              *                                    

consensus_10244#2      TTATTACAAAGGGACATGATTAAATAGATAAG---------------------------- 354
consensus_10244#3      GCGTTG-AAGGTAACCTC------------------------------------------ 314
consensus_10244#1      ATTTATCCTTTTTGTCTTGCCTTGCATATGGGGACACAGGGGATGACT------------ 395
consensus_10244#0      ATTTATCCTTTTTGTCTTGCCTTGCATATGGGAA-ACAGGGGATGACTGCGGACACTCGG 1317
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      GAACTTGAAGCGATCTTACAGGCGCTAATCATTATGAGTAGTTCCATAAGGTTGTCATTA 1377
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      ACTTCTCCACCACCAGTTTGTATTATATAAACGTCTTCCCCGCGAACTGACTCCTCAACC 1437
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      ------------------------------------------------------------
consensus_10244#3      ------------------------------------------------------------
consensus_10244#1      ------------------------------------------------------------
consensus_10244#0      TCAACACTTGTCTCCTGATTACTGAATTTTTTGGAAGTAACTCTACCTAATCGACAGCCA 1497
consensus_10244#4      ------------------------------------------------------------
                                                                                   

consensus_10244#2      -----------------------------------------------------
consensus_10244#3      -----------------------------------------------------
consensus_10244#1      -----------------------------------------------------
consensus_10244#0      ATACGGTCAGCTATCTTTTGAGCCAGGCCTCGTGACGAATTTTGGCCTGCGAG 1550
consensus_10244#4      -----------------------------------------------------
                                                                            




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)