These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10250#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 710 fasta sequence [TGTATGATTACACCTTTGTTTCACGTATACGGGACGACATCTTCTTCCGTATCTCCAGCTATACCATTTTCTGCCATACTTTATAGTCCATTGTCTGTATAGACCCTTTACACTATACGGAAATTGGCGTGGGCATCCACCTCCTGGACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATATCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTCCATCGCTGCATGAACACCACAACATACAAGAAGGCATAGTGTCGTCAGCGCTGTTAATGATGACTGACATTTCACAGTCATCTCGAAATGGATTGCCTTCCAATAACTTGATGAATAAATTAGACGTGTACAGTGGC] [+] EMBL CD161333 [TGTATGATTACACCTTTGTTTCACGTATACGGGACGACATCTTCTTCCGTATCTCCAGCTATACCATTTTCTGCCATACTTTATAGTCCATTGTCTGTATAGACCCTTTACACTATACGGAAATTGGCGTGGGCATCCACCTCCTGGACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATATCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTNTAACAGCTTCTCTCTGGTGGCGTTGTCCATCGCTGCATGAACACANGCACATACAAGAAGGCATAATGTCGTCAGCGCTGGTAATGATGACTG ] [+] EMBL CD161075 [TGTATGATTACACCTTTGTTTCACGTATACGGGACGACATCTTCTTCCGTATCTCCAGCTATACCATTTTCTGCCATACTTTATAGTCCATTGTCTGTATAGACCCTTTACACTATACGGAAATTGGCGTGGGCATCCACCTCCTGGACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATATCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTCAATGGTTNTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTCGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTC ] [-] EMBL CD118744 [ GTATCTCCAGCTATACCATTTTCTGCCATACTTTATAGTCCATTGTCTGTATAGACCCTTTACACTATACGGAAATTGGCGTGGGCATCCACCTCCTGGACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGCAACCCAATATCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAtcgt ] [-] EMBL CD096169 [ TCTGCCATACTTTATACTCCATTGTCTGTATAGACCCTNTACACTATACGGAAATTGACGTGGGCATCCACCTCCTGGACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGACTACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATTTCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCAGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTTAATGGTTTTATTGATGTGGCAATAGGTTGTCCTTCCAACTGTCCATGCATCACTGATATCCTTGCATTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCATTGTCCATCGCTGCATGAACACCACAACATACAAGAAGGCATAGTGTC ] [-] EMBL CD096148 [ TCTGCCATACTTTATACTCCATTGTCTGTATAGACCCTTTACACTATACGGAAATTGACGTGGGCATCCACCTCCTGGACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGACTACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATTTCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCAGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTTAATGGTTTTATTGATGTGGCAATAGGTTGTCCTTCCAACTGTCCATGCATCACTGATATCCTTGCATTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCATTGTCCATCGCTGCATGAACACCACAACATACAAGAAGGCATAGTGTC ] [-] EMBL CD116160 [ GACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACACTCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATATCAACTGTACTGGCACCAGCCCAATCTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAGGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTCCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTC ] [-] EMBL CD116141 [ GACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATATCAACTGTACTGGCACCAGCCCAACTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTC ] [-] EMBL CD123668 [ AATTGCACACAATGGTTAGTTTGAATGGGGAATGAGGACATGTAGCTACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAGTACACCGACCAGCAAGACTCAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCATTGGAACCCAATTTCAGCTGTAGTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGTGTTATATTGCACTATCCGGTCCAAAGTAACATGTGTCAGCCAGCTTTTGCG ] [-] EMBL CD116288 [ CACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATATCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTAGCGCTTTCTTCTCCAACCCCATGTTCCATTTCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTC ] [-] EMBL CD097920 [ TCTCCCACACGATCTGTGTGTAGTGACTACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATTTCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCAGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTTAATGGTTTTATTGATGTGGCAATAGGTTGTCCTTCCAACTGTCCATGCATCACTGATATCCTTGCATTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCATTGTCCATCGCTGCATGAACACCACAACATACAAGAAGGCATAGTGTCGTCAGCGCTGTTAATGATGACTGACATTTCACAGTCATCTCGAAATGGATTGCCTTCCAATAACTTGATGAATAAATTA ] [-] EMBL CD118752 [ CCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTCCATCGCTGCATGAACACAGCAACATACAAGAAGGCATAATGTCGTCAGCGCTGTTAATGATGACTGACATTTCACAGTCATCTCAAGATGGATTGCCTTCCAACAACTTGATGAATAAATGAGACGTGTACAGTGGC] [+] EMBL CD095324 [ CCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCAGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTTAATGGTTTTATTGATGTGGCAATAGGTTGTCCTTCCAACTGTCCATGCATCACTGATATCCTTGCATTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCATTGTCCATCGCTGCATGAACACCACAACATACAAGAAGGCATAGTGTCGTCAGCGCTGTTAATGATGACTGACATTTCACAGTCATCTCGAAATGGATTGCCTTCCAATAACTTGATGAATAAATTA ] [-] EMBL CD118758 [ CCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTCCATCGCTGCATGAACACAGCAACATACAAGAAGGCATAATGTCGTCAGCGCTGTTAATGATGACTGACATTTCACAGTCATCTCAAGATGGATTGCCTTCCAACAACTTGATGA ] [-] EMBL CD111990 [ CATGTGTCAGCCAGCATTTGCGCTTTCTTCTCCAACTCCACGTTCCATTTTAATGGTTTTATTGATGTGGCAATAGGTTGTCCTTCCAACTGTCCATGCATCACTGATATCCTTGCATTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCATTGTCCATCGCTGCATGAACACCACAACATACAAGAAGGCATAGTGTCGTCAGCGCTGTTAATGATGACTGACATTTCACAGTCATCTCGAAATGGATTGCCTTCCAATAACTTGATGAATAAATTA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||