cluster # 10273

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Schistosoma mansoni
cluster # 10273 cluster # 10273 Sequences # 15 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10273#0 length = 1741 sequences # 13

consensus_10273#1 length = 627 sequences # 1
consensus_10273#2 length = 556 sequences # 1

consensusID : consensus_10273#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1741
fasta sequence

                              [CACAGTTTAAAATGCTGGTCCGATTGTCTGTTTT-CTGAACGATGGATCTCCGCTACTTTGCTATTACAAACGAGAAACATATTGTTTGGTATCGGTCGTTCACAAAACGTAGTTTTGAAGATGTAGTACTTAAATATCTGTTATGTAATCCTCCAGATCAAGATATATATTATAGCGAAGGCGATTTCTCTCTTCACTGCTTAACCGTTTCAGGACTTTCCTTTATTGCGGTAACCGATCGAAACGCATCTCGACAAAAATTTCGAAATTTGGTTGTGGAGGTTTCTCGTAATTTTCTCAGTGATGGTACAAGATTTCAAAGGGCTAAAAGTGGTGGTAAAGATTGTTTACAACAGTCTTATAGTCTGAACTTGGAAGAGTTGATGGAATCACCCAACTCTTCTAAGGGAAATGGTTCGTTGGACCAGTTACGTAGTAATGTGAATACTGTAACAGCTGTAATGCAAGAGAATACTAGACTAGCGCTTCAACGAGGTGATCGGTTAAACAATTTGGTCAGTAAAACAGATGAACTTGCAGCCAGCGCTAATCAATTCCAAACAACAGCCACAAAGGTGGCCCGAAAAACTTGGTGGGAAAATTTCCGTATGAAATTAATTATTGTTGGTGTTGTCGGTGGCATACTTCTAGTAATTGTGATAATTATACTCTGGCAGACTGGGGTGTTCAATAGCAAATCGCAACACCAGTAATAATAGCAACAGTAAATAATTAACTTCATATTGTTTACTACATGAAACAGAAAATGCAAAGGAACACCCATCTGAAAATTAGGTGAGATATTCGATAATGTGTTTTTTTTACTGGATCAATTTATACAACACGTCTTGTTAACATTTCAATTTTCTTTATCGCGACACGTTCTCCTTTTGTTTCCCTCGTGACAGATAAATTTTACAAATGATGATGACAATGATTAATATTGCACAGTATATTGTAATTTTTATGCTATATTATAAATATACATACTTAAGTCTTTTTTTGTAATCACTATACCTACTACTAATCCTGCATTAACTACTTCTCACTGATGAAATATCTTTTCTATATAGGCGCAGAGATTTAATGACAATTACATATC--ATATATATATATATATATATATATATATATATAGTGTTCGGAATGATTTTTTCTCTTAAACGAATTTATTTTTCACTCAACATCTATCT-ACTTTGTATGG-GTG-ACTATC-TTCCCAATGTATATCGATTATGTGTTCTTTATTGATCCCAATACACATTTTGTTTATTTTCAATAACAATGACTTTTTGAAAGCCAAAGATTATCAATAAATGAAAGAAGATAAAAGAGGTACAAACTGTTTGATATCTTTTTGTTGGAATTACACTTTGTAAACGCATGCATGTGTCTTTATGCGTGCGTGTGTGCATATATGTTCAAGTGGCTTCATAATAATACCACAACTATTCACTTTTATCATTATTTCCGTGCCCTGTCCTTTTTACTTCTCTACAGATAATTTAAAGTATACTCATTTCTGTACTATTTCTTCTTGCGGTTATTCTCATTACTATTAACATTATGAGAAAATGTGTATTTGCAATTTCTACTCTGGAAGAATTCCTTCTTATTATTGATTAGTACTTATCATGGTTTTACTTTTTACCAGATTTAAATTAATATGTTTGCTCAATATACATAAATTTTCTTTTCCTTTTTTTTAACAAAAATCATATTTGTCATGTATTGAATACCAACAAA]

[+] EMBL SMIMP25              [CACAGTTTAAAATGCTGGTCCGATTGTCTGTTTT CTGAACGATGGATCTCCGCTACTTTGCTATTACAAACGAGAAACATATTGTTTGGTATCGGTCGTTCACAAAACGTAGTTTTGAAGATGTAGTACTTAAATATCTGTTATGTAATCCTCCAGATCAAGATATATATTATAGCGAAGGCGATTTCTCTCTTCACTGCTTAACCGTTTCAGGACTTTCCTTTATTGCGGTAACCGATCGAAACGCATCTCGACAAAAATTTCGAAATTTGGTTGTGGAGGTTTCTCGTAATTTTCTCAGTGATGGTACAAGATTTCAAAGGGCTAAAAGTGGTGGTAAAGATTGTTTACAACAGTCTTATAGTCTGAACTTGGAAGAGTTGATGGAATCACCCAACTCTTCTAAGGGAAATGGTTCGTTGGACCAGTTACGTAGTAATGTGAATACTGTAACAGCTGTAATGCAAGAGAATACTAGACTAGCGCTTCAACGAGGTGATCGGTTAAACAATTTGGTCAGTAAAACAGATGAACTTGCAGCCAGCGCTAATCAATTCCAAACAACAGCCACAAAGGTGGCCCGAAAAACTTGGTGGGAAAATTTCCGTATGAAATTAATTATTGTTGGTGTTGTCGGTGGCATACTTCTAGTAATTGTGATAATTATACTCTGGCAGACTGGGGTGTTCAATAGCAAATCGCAACACCAGTAATAATAGCAACAGTAAATAATTAACTTCATATTGTTTACTACATGAAACAGAAAATGCAAAGGAACACCCATCTGAAAATTAGGTGAGATATTCGATAATGTGTTTTTTTTACTGGATCAATTTATACAACACGTCTTGTTAACATTTCAATTTTCTTTATCGCGACACGTTCTCCTTTTGTTTCCCTCGTGACAGATAAATTTTACAAATGATGATGACAATGATTAATATTGCACAGTATATTGTAATTTTTATGCTATATTATAAATATACATACTTAAGTCTTTTTTTGTAATCACTATACCTACTACTAATCCTGCATTAACTACTTCTCACTGATGAAATATCTTTTCTATATAGGCGCAGAGATTTAATGACAATTACATATC  ATATATATATATATATATATATATATATATATAGTGTTCGGAATGATTTTTTCTCTTAAACGAATTTATTTTTCACTCAACATCTATCT ACTTTGTATGG GTG ACTATC TTCCCAATGTATATCGATTATGTGTTCTTTATTGATCCCAATACACATTTTGTTTATTTTCAATAACAATGACTTTTTGAAAGCCAAAGATTATCAATAAATGAAAGAAGATAAAAGAGGTACAAACTGTTTGATATCTTTTTGTTGGAATTACACTTTGTAAACGCATGCATGTGTCTTTATGCGTGCGTGTGTGCATATATGTTCAAGTGGCTTCATAATAATACCACAACTATTCACTTTTATCATTATTTCCGTGCCCTGTCCTTTTTACTTCTCTACAGATAATTTAAAGTATACTCATTTCTGTACTATTTCTTCTTGCGGTTATTCTCATTACTATTAACATTATGAGAAAATGTGTATTTGCAATTTCTACTCTGGAAGAATTCCTTCTTATTATTGATTAGTACTTATCATGGTTTTACTTTTTACCAGATTTAAATTAATATGTTTGCTCAATATACATAAATTTTCTTTTCCTTTTTTTTAACAAAAATCATATTTGTCATGTATTGAATACCAACAA ]
[+] EMBL CD086827             [CACAGTTTAAAATGCTGGTCCGATTGTCTGTTTT CTGAACGATGGATCTCCGCTACTTTGCTATTACAAACGAGAAACATATTGTTTGGTATCGGTCGTTCACAAAACGTAGTTTTGAAGATGTAGTACTTAAATATCTGTTATGTAATCCTCCAGATCAAGATATATATTATAGCGAAGGCGATTTCTCTCTTCACTGCTTAACCGTTTCAGGACTTTCCTTTATTGCGGTAACCGATCGAAACGCATCTCGACAAAAATTTCGAAATTTGGTTGTGGAGGTTTCTCGTAATTTTCTCAGTGATGGTACAAGATTTCAAAGGGCTAAAAGTGGTGGTAAAGATTGTTTACAACAGTCTTATAGTCTGAACTTGGAAGAGTTGATGGAATCACCCAACTCTTCTAAGGGAAATGGTTCGTTGGACCAGTTACGTAGTAATGTGAATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD186944             [       aatAATGCTGGTCCGATTGTCTGTTTTGCTGAACGATGGATCTCCGTTACTTTGCTATTACAAACGAGAAACATATTGTTTGGTATCGGTCGTTCACAAAACGTAGTTTTGAAGATGTAGTACTTAAATATCTGTTATGTAATCCTCCAGATCAAGATATATATTATAGCGAAAGCGATTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD066082             [                                                                              CATATTGTTTGGTATCGGTCGTTCACAAAACGTAGTTTTGAAGATGTAGTACTTAAATATCTGTTATGTAATCCTCCAGATCAAGATATATATTATAGCGAAGGCGATTTCTCTCTTCACTGCTTAACCGTTTCAGGACTTTCCTTTATTGCGGTAACCGATCGAAACGCATCTCGACAAAAATTTCGAAATTTGGTTGTGGAGGTTTCTCGTAATTTTCTCAGTGATGGTACAAGATTTCAAAGGGCTAAAAGTGGTGGTAAAGATTGTTTACAACAGTCTTATAGTCTGAACTTGGAAGAGTTGATGGAATCACCCAACTCTTCTAAGGGAAATGGTTCGTTGGACCAGTTACGTAGTAATGTGAATACTGTAACAGCTGTAATGCAAGAGAATACTAGACTAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD171054             [                                                                                                                                                                          TTATAGCGAAGGCGATTTCTCTCTTCACTGCTTAACCGTTTCAGGACTTTCCTTTATTGCGGTAACCGATCGAAACGCATCTCGACAAAAATTTCGAAATTTGGTTGTGGAGGTTTCTCGTAATTTTCTCAGTGATGGTACAAGATTTCAAAGGGCTAAAAGTGGTGGTAAAGATTGTTTACAACAGTCTTATAGTCTGAACTTGGAAGAGTTGATGGAATCACCCAACTCTTCTAAGGGAAATGGTTCGTTGGACCAGTTACGTAGTAATGTGAATACTGTAACAGCTGTAATGCAAGAGAATACTAGACTAGCGCTTCAACGAGGTGATCGGTTAAACAATTTGGTCAGTAAAACAGATGAACTTGCAGCCAGCGCTAATCAATTCCAAACAACAGCCACAAAGGTGGCCCGAAAAACTTGGTGGGAAAATTTCCGTATGAAATT ATTATTGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD170849             [                                                                                                                                                                                                                   CAGGACTTTCCTTTATTGCGGTAACCGATCGAAACGCATCTCGACAAAAATTTCGAAATTTGNTTGTGGAGGTTTCTCGTAATTTTCTCAGTGATGGTACAAGATTTCAAAGGGCTAAAAGTGGTGGTAAAGATTGTTTACAACAGTCTTATAGTCTGAACTTGGAAGAGTTGATGGAATCACCCAACTCTTCTAAGGGAAATGGTTCGTTGGACCAGTTACGTAGTAATGTGAATACTGTAACAGCTGTAATGCAAGAGAATACTAGACTAGCGCTTCAACGAGGTGATCGGTTAAACAATTTGGTCAGTAAAACAGATGAACTTGCAGCCAGCGCTAATCAATTCCAAACAACAGCCACAAAGGTGGCCCGAAAAACTTGGTGGGAAAATTTCCGTATGAAATTAATTATTGTTGGTGTTGTCGGTGGCATACTTCTAGTAATTGTGATAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD080550             [                                                                                                                                                                                                                                                                                                CGTAATTTTCTCAGTGATGGTACAAGATTTCAAAGGGCTAAAAGTGGTGGTAAAGATTGTTTACAACAGTCTTATAGTCTGAACTTGGAAGAGTTGATGGAATCACCCAACTCTTCTAAGGGAAATGGTTCGTTGGACCAGTTACGTAGTAATGTGAATACTGTAACAGCTGTAATGCAAGAGAATACTAGACTAGCGCTTCAACGAGGTGATCGGTTAAACAATTTGGTCAGTAAAACAGATGAACTTGCAGCCAGCGCTAATCAATTCCAAACAACAGCCACAAAGGTGGCCCGAAAAACTTGGTGGGAAAATTTCCGTATGAAATTAATTATTGTTGGTGTTGTCGGTGGCATACTTCTAGTAATTGTGATAATTATACTCTGGCAGACTGGGGTGTTCAATAGCAAATCGCAACACCAGTAATAATAGCAACAGTAAATAATTAACTTCATATTGTTTACTACATGAAACAGAAAATGCAAAGGAACACCCATCTGAAAATTAGGTGAGATATTCGATAATGTGTTTTTTTTACTGGATCAATTTATACAACACGTCTTGTTAACATTTCAATTTTCTTTATCGCGACACGTTCTCCTTTTGTTTCCCTCGTGACAGATAAATTNTACANATGATGATGANCATGATTAATATTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD114215             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAGGTGATCGGTTAAACAATTTGGTCAGTAAAACAGATGAACTTGCAGCCAGCGNTAATCAATTCCAAACAACAGCCACAAAGGTGGCCCGAAAAACTTGGTGGGAAAATTTCCGTATGAAATTAATTATTGTTGGTGTTGTCGGTGGCATACTTCTAGTAATTGTGATAATTATACTCTGGCAGACTGGGGTGTTCAATAGCAAATCGCAACACCAGTAATAATAGCAACAGTAAATAATTAACTTCATATTGTTTACTACATGAAACAGAAAATGCAAAGGAACACCCATCTGAAAATTAGGTGAGATATTCGATAATGTGTTTTTTTTACTGGATCAATTTATACAACACGTCTTGTTAACATTTCAATTTTCTTTATCGCGACACGTTCTCCTTTTGTTTCCCTCGTGACAGATAAATTTTACAAATGATGATGACAATGATTAATATTGCACAGTATATTGTAATTTTTATGCTATATTATAAATATACATACTTAAGTCTTTTTTTGTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD060170             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCCACAAAGGTGGCCCGAAAAACTTGGTGGGAAAATTTCCGTATGAAATTAATTATTGTTGGTGTTGTCGGTGGCATACTTCTAGTAATTGTGATAATTATACTCTGGCAGACTGGGGTGTTCAATAGCAAATCGCAACACCAGTAATAATAGCAACAGTAAATAATTAACTTCATATTGTTTACTACATGAAACAGAAAATGCAAAGGAACACCCATCTGAAAATTAGGTGAGATATTCGATAATGTGTTTTTTTTACTGGATCAATTTATACAACACGTCTTGTTAACATTTCAATTTTCTTTATCGCGACACGTTCTCCTTTTGTTTCCCTCGTGACAGATAAATTTTACAAATGATGATGACAATGATTAATATTGCACAGTATATTGTAATTTTTATGCTATATTATAAATATACATACTTAAGTCTTTTTTTGTAATCACTATACCTACTACTAATCCTGCATTAACTACTTCTCACTGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AI976727             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAACTTCATATTGTTTACTACATGAAACAGAAAATGCAAAGGAACACCCATCTGAAAATTAGGTGAGATATTCGATAATGTGTTTTTTTTACTGGATCAATTTATACAACACGTCTTGTTAACATTTCAATTTTCTTTATCGCGACACGTTCTCCTTTTGTTTCCCTCGTGACAGATAAATTTTACAAATGATGATGACAATGATTAATATTGCACAGTATATTGTAATTTTTATGCTATATTATAAATATACATACTTAAGTCTTTTTTTGTAATCACTATACCTACTACTAATCCTGCATTAACTACTTCTCACTGATGAAATATCTTTTCTATATAGGCGCAGAGATTTAATGACAATTACATATCATATATATATATATATATATATATATATATATATAGTGTTCGGAATGATTTTTTCTCTTAAACGAATTTATTTTTCACTCAACATCTATCT ACTTTGTATGG GTG ACTATC TTCCCAATGTATATCGATTATGTGTTCTTTATTGATCCCAATACACATTTTGTTTATTTTCAACAACAATGACTNTTTGAAAGCCAAAGATTATCAATAAATGAAAGAAGATAAAAGAGGTACAAACTGTTTGATATCTTTTTGTTGGAATTACACTTTGTAAACGCATGCATGTGTCTTTATGCGTGCGTGTGTGCATATATGTTCAAGTGGCTTCATAATAATACCACAACTATTCACTTTTATCATTATTTCCG                                                                                                                                                                                                                                                                                 ]
[-] EMBL BF936169             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATATATATATATATATATATAGTGTTCGGAATGATTTTTTCTCTTAAACGAATTTATTTTTCACTCAACATCTATCT ACTTTGTATGG GTG ACTATC TTCCCAATGTATATCGATTATGTGTTCTTTATTGATCCCAATACACATTTTGTTTATTTTCAATAACAATGACTTTTTGAAAGCCAAAGATTATCAATAAATGAAAGAAGATAAAAGAGGTACAAACTGTTTGATATCTTTTTGTTGGAATTACACTTTGTAAACGCATGCATGTGTCTTTATGCGTGCGTGTGTGCATATATGTTCAAGTGGCTTCATAATAATACCACAACTATTCACTTTTATCATTATTTCCGTGCCCTGTCCTTTTTACTTCTCTACAGATAATTTAAAGTATACTCATTTCTGTACTATTTCTTCTTGCGGTTATTCTCATTACTATTAACATTATGAGAAAATGTGTATTTGCAATTTCTACTCTGGAAGAATTCCTTCTTATTATTGATTAGTACTTATCATGGTTTTACTTTTTACCAGATTTAAATTAATATGTTTGCTC                                                                      ]
[-] EMBL AI067928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATGATTTTTTCTCTTAAACGAATTTATTTTTCACTCAACATGTATTTAACTTTGTATGG GTG ACTATCTTTCCCAATGTATATCGATTATTTGTTCTCTATTGATCCCAATACACATTTTGTTTATTTTCAATAACAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD076534             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCTATCT ACTTTGTATGGNGTGAACTATC TTCCCAATGTATATCGATTATGTGTTCTTTATTGATCCCAATACACATTTTGTTTATTTTCAATAACAATGACTTTTTGAAAGCCAAAGATTATCAATAAATGAAAGAAGATAAAAGAGGTACAAACTGTTTGATATCTTTTTGTTGGAATTACACTTTGTAAACGCATGCATGTGTCTTTATGCGTGCGTGTGTGCATATATGTTCAAGTGGCTTCATAATAATACCACAACTATTCACTTTTATCATTATTTCCGTGCCCTGTCCTTTTTACTTCTCTACAGATAATTTAAAGTATACTCATTTCTGTACTATTTCTTCTTGCGGTTATTCTCATTACTATTAACATTATGAGAAAATGTGTATTTGCAATTTCTACTCTGGAAGAATTCCTTCTTATTATTGATTAGTACTTATCATGGTTTTACTTTTTACCAGATTTAAATTAATATGTTTGCTCAATATACATAAATTTTCTTTTCC TTTTTTTAACAAAAATCATATTTGTCATGTATTGAATACCAACAAA]




>consensus_10273#0
CACAGTTTAAAATGCTGGTCCGATTGTCTGTTTTCTGAACGATGGATCTCCGCTACTTTG
CTATTACAAACGAGAAACATATTGTTTGGTATCGGTCGTTCACAAAACGTAGTTTTGAAG
ATGTAGTACTTAAATATCTGTTATGTAATCCTCCAGATCAAGATATATATTATAGCGAAG
GCGATTTCTCTCTTCACTGCTTAACCGTTTCAGGACTTTCCTTTATTGCGGTAACCGATC
GAAACGCATCTCGACAAAAATTTCGAAATTTGGTTGTGGAGGTTTCTCGTAATTTTCTCA
GTGATGGTACAAGATTTCAAAGGGCTAAAAGTGGTGGTAAAGATTGTTTACAACAGTCTT
ATAGTCTGAACTTGGAAGAGTTGATGGAATCACCCAACTCTTCTAAGGGAAATGGTTCGT
TGGACCAGTTACGTAGTAATGTGAATACTGTAACAGCTGTAATGCAAGAGAATACTAGAC
TAGCGCTTCAACGAGGTGATCGGTTAAACAATTTGGTCAGTAAAACAGATGAACTTGCAG
CCAGCGCTAATCAATTCCAAACAACAGCCACAAAGGTGGCCCGAAAAACTTGGTGGGAAA
ATTTCCGTATGAAATTAATTATTGTTGGTGTTGTCGGTGGCATACTTCTAGTAATTGTGA
TAATTATACTCTGGCAGACTGGGGTGTTCAATAGCAAATCGCAACACCAGTAATAATAGC
AACAGTAAATAATTAACTTCATATTGTTTACTACATGAAACAGAAAATGCAAAGGAACAC
CCATCTGAAAATTAGGTGAGATATTCGATAATGTGTTTTTTTTACTGGATCAATTTATAC
AACACGTCTTGTTAACATTTCAATTTTCTTTATCGCGACACGTTCTCCTTTTGTTTCCCT
CGTGACAGATAAATTTTACAAATGATGATGACAATGATTAATATTGCACAGTATATTGTA
ATTTTTATGCTATATTATAAATATACATACTTAAGTCTTTTTTTGTAATCACTATACCTA
CTACTAATCCTGCATTAACTACTTCTCACTGATGAAATATCTTTTCTATATAGGCGCAGA
GATTTAATGACAATTACATATCATATATATATATATATATATATATATATATATAGTGTT
CGGAATGATTTTTTCTCTTAAACGAATTTATTTTTCACTCAACATCTATCTACTTTGTAT
GGGTGACTATCTTCCCAATGTATATCGATTATGTGTTCTTTATTGATCCCAATACACATT
TTGTTTATTTTCAATAACAATGACTTTTTGAAAGCCAAAGATTATCAATAAATGAAAGAA
GATAAAAGAGGTACAAACTGTTTGATATCTTTTTGTTGGAATTACACTTTGTAAACGCAT
GCATGTGTCTTTATGCGTGCGTGTGTGCATATATGTTCAAGTGGCTTCATAATAATACCA
CAACTATTCACTTTTATCATTATTTCCGTGCCCTGTCCTTTTTACTTCTCTACAGATAAT
TTAAAGTATACTCATTTCTGTACTATTTCTTCTTGCGGTTATTCTCATTACTATTAACAT
TATGAGAAAATGTGTATTTGCAATTTCTACTCTGGAAGAATTCCTTCTTATTATTGATTA
GTACTTATCATGGTTTTACTTTTTACCAGATTTAAATTAATATGTTTGCTCAATATACAT
AAATTTTCTTTTCCTTTTTTTTAACAAAAATCATATTTGTCATGTATTGAATACCAACAA
A

consensusID : consensus_10273#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 627
fasta sequence

                              [CCTCGAGGCCANAATTCGGCACGAGGGTGGCCCGAAAAACTTGGTGGGAAAATTTCCGTATGAAATTAATTATTGTTGGTGTTGTCGGTGGCATACTTCTAGTAATTGTGATAATTATACTCTGGCAGACTGGGGTGTTCAATAGCAAATCGCAACACCAGTAATAATAGCAACAGTAAATAATTAACTTCATATTGTTTACTACATGAAACAGAAAATGCAAAGGAACACCCATCTGAAAATTAGGTGAGATATTCGATAATGTGTTTTTTTTACTGGATCAATTTATACAACACGTCTTGTTAACATTTCAATTTTCTTTATCGCGACACGTTCTCCTTTTGTTTCCCTCGTGACAGATAAATTTTACAAATGATGATGACAATGATTAATATTGCACAGTATATTGTAATTTTTATGCTATATTATAAATATACATACTTAAGTCTTTTTTTGTAATCTCTATACCTACTACTAATCCTGCATTAACTACTTCTCACTGATGAAATATCTTTTCTATATAGGCGCAGAGATTTAATGACAATTACATATCATATATATATATATATATATATATATATATANTATAGGGTTCGGAATGATTNTTTCTCTTAACGAATTATTTTT]

[+] EMBL CD080544             [CCTCGAGGCCANAATTCGGCACGAGGGTGGCCCGAAAAACTTGGTGGGAAAATTTCCGTATGAAATTAATTATTGTTGGTGTTGTCGGTGGCATACTTCTAGTAATTGTGATAATTATACTCTGGCAGACTGGGGTGTTCAATAGCAAATCGCAACACCAGTAATAATAGCAACAGTAAATAATTAACTTCATATTGTTTACTACATGAAACAGAAAATGCAAAGGAACACCCATCTGAAAATTAGGTGAGATATTCGATAATGTGTTTTTTTTACTGGATCAATTTATACAACACGTCTTGTTAACATTTCAATTTTCTTTATCGCGACACGTTCTCCTTTTGTTTCCCTCGTGACAGATAAATTTTACAAATGATGATGACAATGATTAATATTGCACAGTATATTGTAATTTTTATGCTATATTATAAATATACATACTTAAGTCTTTTTTTGTAATCTCTATACCTACTACTAATCCTGCATTAACTACTTCTCACTGATGAAATATCTTTTCTATATAGGCGCAGAGATTTAATGACAATTACATATCATATATATATATATATATATATATATATATANTATAGGGTTCGGAATGATTNTTTCTCTTAACGAATTATTTTT]




>consensus_10273#1
CCTCGAGGCCANAATTCGGCACGAGGGTGGCCCGAAAAACTTGGTGGGAAAATTTCCGTA
TGAAATTAATTATTGTTGGTGTTGTCGGTGGCATACTTCTAGTAATTGTGATAATTATAC
TCTGGCAGACTGGGGTGTTCAATAGCAAATCGCAACACCAGTAATAATAGCAACAGTAAA
TAATTAACTTCATATTGTTTACTACATGAAACAGAAAATGCAAAGGAACACCCATCTGAA
AATTAGGTGAGATATTCGATAATGTGTTTTTTTTACTGGATCAATTTATACAACACGTCT
TGTTAACATTTCAATTTTCTTTATCGCGACACGTTCTCCTTTTGTTTCCCTCGTGACAGA
TAAATTTTACAAATGATGATGACAATGATTAATATTGCACAGTATATTGTAATTTTTATG
CTATATTATAAATATACATACTTAAGTCTTTTTTTGTAATCTCTATACCTACTACTAATC
CTGCATTAACTACTTCTCACTGATGAAATATCTTTTCTATATAGGCGCAGAGATTTAATG
ACAATTACATATCATATATATATATATATATATATATATATATANTATAGGGTTCGGAAT
GATTNTTTCTCTTAACGAATTATTTTT

consensusID : consensus_10273#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 556
fasta sequence

                              [CTATTTACTTTGTATGGGTGACTATCTCCCCAATGTATATCGATTATGTGTTCTTTATTGATCCCAATACACATTTTGTTTATTTTCAATAACAATGACTTTTTGAAAGCCAAAGATTATCAATAAATGAAAGAAGATAAAAGAGGTCCAAACTGTTTGATATCTTTTTGTTGGAATTACACTTTGTAAACGCATGCATGTGTCTTTATGCGTGCGTGTGTGCATATATGTTCAAGTGGCTTCATAATAATACCACAACTATTCACTTTTATCATTATTTCCGTGCCCTGTCCTTTTTACTTCTCTACAGATAATTTAAAGTATAGTCATTTCTGTACTATTTCTTCTGGCGGTTATTCTCATTACTATTACCATTATGAGAAAATATAAATTTGCAATTTCTACTATGGAAGAATTCCTTCTTATTATTGATTAGTACTTATCATGGTTTTACTTTTTACCAAATTTAAATTAATATGTTTGCTCAATATACATAAATTTTCTTTTCCTTTTTTTAACAAAAATCATATTTGTCATGTATTGAATGGCTTTCAAA]

[-] EMBL CD082947             [CTATTTACTTTGTATGGGTGACTATCTCCCCAATGTATATCGATTATGTGTTCTTTATTGATCCCAATACACATTTTGTTTATTTTCAATAACAATGACTTTTTGAAAGCCAAAGATTATCAATAAATGAAAGAAGATAAAAGAGGTCCAAACTGTTTGATATCTTTTTGTTGGAATTACACTTTGTAAACGCATGCATGTGTCTTTATGCGTGCGTGTGTGCATATATGTTCAAGTGGCTTCATAATAATACCACAACTATTCACTTTTATCATTATTTCCGTGCCCTGTCCTTTTTACTTCTCTACAGATAATTTAAAGTATAGTCATTTCTGTACTATTTCTTCTGGCGGTTATTCTCATTACTATTACCATTATGAGAAAATATAAATTTGCAATTTCTACTATGGAAGAATTCCTTCTTATTATTGATTAGTACTTATCATGGTTTTACTTTTTACCAAATTTAAATTAATATGTTTGCTCAATATACATAAATTTTCTTTTCCTTTTTTTAACAAAAATCATATTTGTCATGTATTGAATGGCTTTCAAA]




>consensus_10273#2
CTATTTACTTTGTATGGGTGACTATCTCCCCAATGTATATCGATTATGTGTTCTTTATTG
ATCCCAATACACATTTTGTTTATTTTCAATAACAATGACTTTTTGAAAGCCAAAGATTAT
CAATAAATGAAAGAAGATAAAAGAGGTCCAAACTGTTTGATATCTTTTTGTTGGAATTAC
ACTTTGTAAACGCATGCATGTGTCTTTATGCGTGCGTGTGTGCATATATGTTCAAGTGGC
TTCATAATAATACCACAACTATTCACTTTTATCATTATTTCCGTGCCCTGTCCTTTTTAC
TTCTCTACAGATAATTTAAAGTATAGTCATTTCTGTACTATTTCTTCTGGCGGTTATTCT
CATTACTATTACCATTATGAGAAAATATAAATTTGCAATTTCTACTATGGAAGAATTCCT
TCTTATTATTGATTAGTACTTATCATGGTTTTACTTTTTACCAAATTTAAATTAATATGT
TTGCTCAATATACATAAATTTTCTTTTCCTTTTTTTAACAAAAATCATATTTGTCATGTA
TTGAATGGCTTTCAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10273#0      CACAGTTTAAAATGCTGGTCCGATTGTCTGTTTTCTGAACGATGGATCTCCGCTACTTTG 60
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      CTATTACAAACGAGAAACATATTGTTTGGTATCGGTCGTTCACAAAACGTAGTTTTGAAG 120
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      ATGTAGTACTTAAATATCTGTTATGTAATCCTCCAGATCAAGATATATATTATAGCGAAG 180
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      GCGATTTCTCTCTTCACTGCTTAACCGTTTCAGGACTTTCCTTTATTGCGGTAACCGATC 240
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      GAAACGCATCTCGACAAAAATTTCGAAATTTGGTTGTGGAGGTTTCTCGTAATTTTCTCA 300
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      GTGATGGTACAAGATTTCAAAGGGCTAAAAGTGGTGGTAAAGATTGTTTACAACAGTCTT 360
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      ATAGTCTGAACTTGGAAGAGTTGATGGAATCACCCAACTCTTCTAAGGGAAATGGTTCGT 420
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      TGGACCAGTTACGTAGTAATGTGAATACTGTAACAGCTGTAATGCAAGAGAATACTAGAC 480
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      TAGCGCTTCAACGAGGTGATCGGTTAAACAATTTGGTCAGTAAAACAGATGAACTTGCAG 540
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      CCAGCGCTAATCAATTCCAAACAACAGCCACAAAGGTGGCCCGAAAAACTTGGTGGGAAA 600
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      ATTTCCGTATGAAATTAATTATTGTTGGTGTTGTCGGTGGCATACTTCTAGTAATTGTGA 660
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      TAATTATACTCTGGCAGACTGGGGTGTTCAATAGCAAATCGCAACACCAGTAATAATAGC 720
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      AACAGTAAATAATTAACTTCATATTGTTTACTACATGAAACAGAAAATGCAAAGGAACAC 780
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      CCATCTGAAAATTAGGTGAGATATTCGATAATGTGTTTTTTTTACTGGATCAATTTATAC 840
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      AACACGTCTTGTTAACATTTCAATTTTCTTTATCGCGACACGTTCTCCTTTTGTTTCCCT 900
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      CGTGACAGATAAATTTTACAAATGATGATGACAATGATTAATATTGCACAGTATATTGTA 960
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      ATTTTTATGCTATATTATAAATATACATACTTAAGTCTTTTTTTGTAATCACTATACCTA 1020
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      CTACTAATCCTGCATTAACTACTTCTCACTGATGAAATATCTTTTCTATATAGGCGCAGA 1080
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      GATTTAATGACAATTACATATCATATATATATATATATATATATATATATATATAGTGTT 1140
consensus_10273#2      ------------------------------------------------------------
consensus_10273#1      ------------------------------------------------------------
                                                                                   

consensus_10273#0      CGGAATGATTTTTTCTCTTAAACGAATTTATTTTTCACTCAACATCTATCTACTTTGTAT 1200
consensus_10273#2      ---------------------------------------------CTATTTACTTTGTAT 15
consensus_10273#1      -------------CCTCGAGGCCANAATTCGGCACGAGGGTGGCCCGAAAAACTTGGTGG 47
                                                                    * *   **** **  

consensus_10273#0      GGGTGACTATCTTCCCAATGTAT-ATCGATTATGTGTTCTTTAT--TGATCCCAATACAC 1257
consensus_10273#2      GGGTGACTATCTCCCCAATGTAT-ATCGATTATGTGTTCTTTAT--TGATCCCAATACAC 72
consensus_10273#1      GAAAATTTCCGTATGAAATTAATTATTGTTGGTGTTGTCGGTGGCATACTTCTAGTAATT 107
                       *      *   *    ***  ** ** * *  ***  **  *    *  * * * **   

consensus_10273#0      ATTTTGTTTATTTTCAATAACAATGACTTTTTGAAAGCCAAAGATTATCAATAAATGAAA 1317
consensus_10273#2      ATTTTGTTTATTTTCAATAACAATGACTTTTTGAAAGCCAAAGATTATCAATAAATGAAA 132
consensus_10273#1      GTGATAATTATACTCTGGCAGACTGGGGTGTTCAATAGCAAA---TCGCAACACCAGTAA 164
                        *  *  ****  **    * * **   * ** **   ****   *  *** *   * **

consensus_10273#0      GAAGATAAAAGAGGTACAAACTGTTTGATATCTTTT--TGTTGGAATTACACTTTGTAAA 1375
consensus_10273#2      GAAGATAAAAGAGGTCCAAACTGTTTGATATCTTTT--TGTTGGAATTACACTTTGTAAA 190
consensus_10273#1      TAATAGCAACAGTAAATAATTAACTTCATATTGTTTACTACATGAAACAGAAAATGCAAA 224
                        ** *  **        **     ** ****  ***  *    ***  * *   ** ***

consensus_10273#0      CGCATGCATGTGTCTTTAT-GCGTGCG-TGTGTGCATATATGTTCAAGTGGCTTCATAA- 1432
consensus_10273#2      CGCATGCATGTGTCTTTAT-GCGTGCG-TGTGTGCATATATGTTCAAGTGGCTTCATAA- 247
consensus_10273#1      GGAACACCCATCTGAAAATTAGGTGAGATATTCGATAATGTGTTTTTTTTACTGGATCAA 284
                        * *  *   * *    **   *** * * *  *   ** ****    *  **  ** * 

consensus_10273#0      -TAATACCACAACTATT-----CACTTTTATCATTATTTCCGTGCCCTGTCCT--TTTTA 1484
consensus_10273#2      -TAATACCACAACTATT-----CACTTTTATCATTATTTCCGTGCCCTGTCCT--TTTTA 299
consensus_10273#1      TTTATACAACACGTCTTGTTAACATTTCAATTTTCTTTATCGCGACACGTTCTCCTTTTG 344
                        * **** ***  * **     ** **  **  *  **  ** * *  ** **  **** 

consensus_10273#0      CTTCTCT----ACAGATAA-TTTAAAGTATACTCATTTCTGTACTATTTCTTCTTGCGGT 1539
consensus_10273#2      CTTCTCT----ACAGATAA-TTTAAAGTATAGTCATTTCTGTACTATTTCTTCTGGCGGT 354
consensus_10273#1      TTTCCCTCGTGACAGATAAATTTTACAAATGATGATGACAATGATTAATATTGCACAGTA 404
                        *** **    ******** *** *   **  * **  *  *  *   * **     *  

consensus_10273#0      TATTCTCATTACTATTAACATTATGAGAAAATGTGTATTTGCAATTTCTACTCTGGA--- 1596
consensus_10273#2      TATTCTCATTACTATTACCATTATGAGAAAATATAAATTTGCAATTTCTACTATGGA--- 411
consensus_10273#1      TATTGTAATTTTTAT-GCTATATTATAAATATACATACTTAAGTCTTTTTTTGTAATCTC 463
                       **** * ***  ***    **  *   ** **    * **     ** *  * *      

consensus_10273#0      -AGAATTCCTTCTTATTATTGATTAG-TACTTATCATGGTTTTACTTTTTACCAGATTTA 1654
consensus_10273#2      -AGAATTCCTTCTTATTATTGATTAG-TACTTATCATGGTTTTACTTTTTACCAAATTTA 469
consensus_10273#1      TATACCTACTACTAATCCTGCATTAACTACTTCTCACTGATGAAATATCTTTTCTATATA 523
                        * *  * ** ** **  *  ****  ***** ***  * *  * * * *     ** **

consensus_10273#0      AATTAATATGTTTGCT--CAAT-ATACATAAATTTTCTTTTCCTTTTTTTTAACAAAAAT 1711
consensus_10273#2      AATTAATATGTTTGCT--CAAT-ATACATAAATTTTCTTTTCCTTTTTTT-AACAAAAAT 525
consensus_10273#1      GGCGCAGAGATTTAATGACAATTACATATCATATATATATATATATATATATATATATAT 583
                            * *  ***  *  **** * * ** *  * * * *   * * * *  * * * **

consensus_10273#0      CATATTTGTCATGTATTGAATA-CCAACAAA------------- 1741
consensus_10273#2      CATATTTGTCATGTATTGAATGGCTTTCAAA------------- 556
consensus_10273#1      ANTATAGGGTTCGGAATGATTNTTTCTCTTAACGAATTATTTTT 627
                         ***  *    * * *** *      *  *