These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10278#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1491 fasta sequence [GAATTTTATTTCAAAGGTTTTAATGTTGCATTACAAAAAGCCTGAGGATAGAACGTGAATATTTTTTGAATGTCATAAAATATCTGAATACATGATTATAAGCATTTGAATGTTCAGAAATGGATTGAATTAAATCACTTTAAGACATCATCAGCTGAATGATCATGCAGCATTTTCGATCATCAGTATCATACAGTCGAAGAGTGATTGATTCAGTTTTTGAAAATGTGAAAGGAAAGTTACTGGCTATTAGTCGAACATTTTGGTGGGACGATTTGTG-AATGTTGAACATCTATGACTTCTGGTTGTGGAACAAGGAAAGCGCTTTTTGAATCGGCTTCTATTACATCACCAATTATCCATGATGGACATCCAATTTCAGCAGTTAGCTCTTCACAGAAAGATTGGGCAGATTCTCGAGGAAGAACAATCAACAGACCACCTGATGTTTCTGGAGAAAAACCTTGAAGTAGTTTTAACCGATCGTTTAATGCCCTGGAGATTAACGCGCTTCCTTCAAGACACGGCAAA-GTATGAATGCTAAAAGCTAAGTGATTGTTTGCCTGAACTTGGACTAAATTATTTGCATGACCCAAAAGACCGAAACCTGTTACGTCAGTACACCCATGA-GCGTGATGTTTGTGCATTAGTCGAGCAGCTGTTCGATTTAAATGAGTCATAGAGAGAGTAGCGGAATGAAACAGACTCTTTACTTTATCTGACGTGATGACATTGGCTAGATTTCCAGACCAAGATGGACTGTCCTCCAGCATCCAGTAGTAGACTGAAACAGC-TACTTGGGTGCCCAAAGGTTTTGTGAGTACTAAAACGTCACCCA-CTGCAGCTTGATCCGGCATAATATATTCTGAGTCGCTGC-AAACTGAAGTTGCTACGCCACCAATCATTAACCATGGACTCAATACAGTTTGTCCTCCACGAACATATGTTCCAGCTTCTGATGCACAGTCCTTAAAACCCTCCATCAATAAGCGATTTGATATTTCGCGTTCTTCTTGGGTCATTTCACGTGGAACACCCAACAGTAGAAGCAAATTATCACAGTCAACTACGCCCATTGCATACAAATCACTCAGTACATTACAGCCCGTAATTCGACCCATAGTGTAAGGATCATCAATCAGAGGATAAAAGAAGTCGGTTGTTTGGATAAGTTTCAAGTTATTTCGAATAGGAATAACACAACAATCGAGTTCCAATGCCAGTAACGGTTTATTACTTGAAAGTGAACATGGCTGAGGTTGATTCAGTGCCTCGAGCAATTTTTTCAGTTCAGCTTGAGGCACTTTACAACCTCATCCTCTCAGGAATGAAAATTTAGTTAGACGAAAGTCACTCCGAAGTCCATAAGATTCAGGGTTGAAAAACCCAGTCAGTTGGCGACGATCACCCGCACTCATACGTCGACGGAAATACAAAGAA-AATTGATAGACGGTTCTGCCGACAACCCTCGTGCGCGTGACTACAGAATTA] [+] EMBL CD074452 [GAATTTTATTTCAAAGGTTTTAATGTTGCATTACAAAAAGCCTGAGGATAGAACGTGAATATTTTTTGAATGTCATAAAATATCTGAATACATGATTATAAGCATTTGAATGTTCAAAAATGGATTGAATTAAATCACTTTAAGACATCATCAGCTGAATGATCATGCAGCATTTTCGATCATCAGTATCATACAGTCGAAGAGTGATTGATTCAGTTTTTGAAAATGTGAAAGGAAAGTTACTGGCTATTAGTCGAACATTTTGGTGGGACGATTTGTG AATGTTGAACATCTATGACTTCTGGTTGTGGAACAAGGAAAGCGCTTTTTGAATCGGCTTCTATTACATCACCAATTATCCATGATGGACATCCAATTTCAGCAGTTAGCTCTTCACAGAAAGATTGGGCAGATTCTCGAGGAAGAACAATCAACAGACCACCTGATGTTTCTGGAGAAAAACCTTGAAGTAGTTTTAACCGATCGTTTAATGCCCTGGAGATTAACGCGCTTCCTTCAAGACACGGCAAA GTATGAATGCTAAAAGCTAAGTGATTGTTTGCCTGAACTTGGACTAAATTATTTGCATGACCCAAAAGACCGAAACCTGTTACGTCAGTACACCCATGANGCGTGATGTTTGTGCA ] [+] EMBL CD074271 [GAATTTTATTTCAAAGGTTTTAATGTTGCATTACAAAAAGCCTGAGGATAGAACGTGAATATTTTTTGAATGTCATAAAATATCTGAATACATGATTATAAGCATTTGAATGTTCAAAAATGGATTGAATTAAATCACTTTAAGACATCATCAGCTGAATGATCATGCAGCATTTTCGATCATCAGTATCATACAGTCGAAGAGTGATTGATTCAGTTTTTGAAAATGTGAAAGGAAAGTTACTGGCTATTAGTCGAACATTTTGGTGGGACGATTTGTG AATGTTGAACATCTATGACTTCTGGTTGTGGAACAAGGAAAGCGCTTTTTGAATCGGCTTCTATTACATCACCAATTATCCATGATGGACATCCAATTTCAGCAGTTAGCTCTTCACAGAAAGATTGGGCAGATTCTCGAGGAAGAACAATCAACAGACCACCTGATGTTTCTGGAGAAAAACCTTGAAGTAGTTTTAACCGATCGTTTAATGCCCTGGAGATTAACGCGCTTCCTTCAAGACACGGCAAA GTATGAATGCTAAAAGCTAAGTGATTGTTTGCCTGAACTTGGACTAAATTATTTGCATGACCCAAAAGACCGAAACCTGTTACGTCAGTACACCCATGAngc ] [-] EMBL CD137205 [ TTATTTCAAAGGTTTTAATGTTGCATTACAAAAAGCCTGAGGATAGAACGTGAATATTTTTTGAATGTCATAAAATATCTGAATACATGATTATAAGCATTTGAATGTTCAGAAATGGATTGAATTAAATCACTTTAAGACATCATCAGCTGAATGATCATGCAGCATTTTCGATCATCAGTATCATACAGTCGAAGAGCGATTGATTCAGTTTTTGAAAATGTGAAAGGAAAGTTACTGGCTATTAGTCGAACATTTTGGTGGGACGATTTGTG AATGTTGAACATCTATGACTTCTGGTTGTGGAACAAGGAAAGCGCTTTTTGAATCGGCTTCTATTACATCACCAATTATCCATGATGGACATCCAATTTCAGCAGTTAGCTCTTCACAGAAAAATTGGGCAGATTCTCGAGGAAGAACAATCAACAGACCACCTGATGTTTCTGGAGAAAA ] [+] EMBL CD181561 [ GTGAATATTTTTTGAATGTCGTAAAATATCTGAATACATGATTATAAGCATTTGAATGTTCAGAAATGGATTGAATTAAATCACTTTAAGACATCATCAGCTGAATGATCATGCAGCATTTTCGATCATCAGTATCATACAGTCGAAGAGTGATTGATTCAGTTTTTGAAAATGTGAAAGGAAAGTTACTGGCTATTAGTCGAACATTTTGGTGGGACGATTTGTGAAATG TGAACATCTATGACTTCTGGTTGTGGAACAGGNAAAng ] [+] EMBL CD072041 [ TATAAGCATTTGAATGTTCAGAAATGGATTGAATTAAATCACTTTAAGACATCATCAGCTGAATGATCATGCAGCATTTTCGATCATCAGTATCATACAGTCGAAGAGTGATTGATTCAGTTTTTGAAAATGTGAAAGGAAAGTTACTGGCTATTAGTCGAACATTTTGGTGGGACGATTTGTG AATGTTGAACATCTATGACTTCTGGTTGTGGAACAAGGAAAGCGCTTTTTGAATCGGCTTCTATTACATCACCAATTATCCATGATGGACATCCCATTTCAGCAGTTAGCTCTTCACAGAAAGATTGGGCAGATTCTCGAGGA ] [+] EMBL BF936497 [ TAAGACATCATCAGCTGAATGATCATGCAGCATTTTCGATCATCAGTATCATACAGTCGAAGAGTGATTGATTCAGTTTTTGAAAATGTGAAAGGAAAGTTACTGGCTATTAGTCGAACATTTTGGTGGGACGATTTGTG AATGTTGAACATCTATGACTTCTGGTTGTGGAACAAGGAAAGCGCTTTTTGAATCGGCTTCTATTACATCACCAATTATCCATGATGGACATCCAATTTCAGCAGTTAGCTCTTCACAGAAAGATTGGGCAGATTCTCGAGGAAGAACAATCAACAGACCACCTGATGTTTCTGGAGAAAAACCTTGAAGTAGTTTTAACCGATCGTTTAATGCCCTGGAGATTAACGCGCTTCCTTCAAGACACGGCAAA GTATGAATGCTAAAAGCTAAGTGATTGTTTGCCTGAACTTGGACTAAATTATTTGCATGACCCAAAAGACCGAAACCTGTTACGTCAGTACACCCATGA GCGTGATGTTTGTGCATTAGTCGAGCAGCTGTTCGATTTAAATGAGTCATAGAGAGAGTAGCGGAATGAAACAGACTCTTTACTTTATCTGACGTGATGACATTGGCTAGATTTCCAGACCAAGATGGACTGTCCTCCAGCATCCAGTAGTAGACTGAAACAGCTTACTT GGTGC ] [+] EMBL CD129947 [ CAATTATCCATGATGGACATCCAATCTTAGCAGTTAGCTCTT ACAGAAAGATTGGGCAGATTCTCGAGGAAGAACAATCAACAGACCACCTGATGTTTCTGGAGAAAAACCgggt ] [-] EMBL CD188264 [ TATCCATGATGGACATCCAATTTCAGCAGTTAGCTCTTCACAGAAAGATTGGGCAGATTCTCGAGGAAGAACAATCAACAGACCACCTGATGTTTCTGGAGAAAAACCTTGAAGTAGTTTTAACCGATCGTTTAATGCCCTGGAGATTAACGCGCTTCCTTCAAGACACGGCAAA GTATGAATGCTAAAAGCTAAGTGATTGTTTGCCTGAACTTGGACTAAATTATTTGCACGACCCAAAAGACCGAAACCTGTTACGTCAGTACACCCATGA GCGTGATGTTTGTGCATTAGTCGAGCAGCTGTTCGATTTAAATGAGTCATAGAGAGAGTAGCGGAATGAAACAGACTCTTTACTTTATCTGACGTGATGACATTGGCTAG ] [-] EMBL CD071987 [ TGGACATCCAATTTCAGCAGTTAGCTCTTCACAGAAAGATNGGGCAGATTCTCGAGGAAGAACAATCAACAGACCACCTGATGTTTCTGGAGAAAAACCTTGAAGTAGTTTTAACCGATCGTTTAATGCCCTGGAGATTAACGCGCTTCCTTCAAGACACGGCAAA GTATGAATGCTAAAAGCTAAGTGATTGTTTGCCTGAACTTGGACTAAATTATTTGCATGACCCAAAAGACCGAAACCTGTTACGTCAGTACACCCATGA GCGTGATGTTTGTGCATTAGTCGAGCAGCTGTTCGATTTAAATGAGTCATAGAGAGAGTAGCGGAATGAAACAGACTCTTTACTTTATCTGACGTGATGACATTGGCTAGATTTCCAGACCAAGATGGACTGTCCTCCAGCATCCAGTAGTAGACTGAAACAGC TACTTGGGTGCCCAAAGGTTTTGTGAGT ] [+] EMBL CD195701 [ TTAGCTCTTCACAGAAAGATTGGGCAGATTCTCGAGGAAGAACAATCAACAGACCACCTGATGTTTCTGGAGAAAAACCTTGAAGTAGTTTTAACCGATCGTTTAATGCCCTGGAGATTAACGCGCTTCCTTCAAGACACGGCAAA GTATGAATGCTAAAAGCTAAGTGATTGTTTGCCTGAACTTGGACTAAATTATTTGCATGACCCAAAAGACCGAAACCTGTTACGTCAGTACACCCATGA GCGTGATGTTTGTGCATTAGTCGAGCAGCTGTTCGATTTAAATGAGTCATAGAGAGAGTAGCGGAATGAAACAGACTCTTTACTTTATCTGAC ] [-] EMBL CD069432 [ agTAGCTC TCACAGAAAGATT GGCAGATTCTCGAGGAAGAACAATCAACAGACCACCTGATGTTTCTGGAGAAAAACCTTGAAGTAGTTTTAACCGATCGTTTAATGCCCTGGAGATTAACGCGCTTCCTTCAAGACACGGCAAA GTATGAATGCTAAAAGCTAAGTGATTGTTTGCCTGAACTTGGACTAAATTATTTGCATGACCCAAAAGACCGAAACCTGTTACGTCAGTACACCCATGA GCGTGATGTTTGTGCATTAGTCGAGCAGCTGTTCGATTTAAATGAGTCATAGAGAGAGTAGCGGAATGAAACAGACTCTTTACTTTATCTGACGTGATGACATTGGCTAGATTTCCAGACCAAGATGGACTGTCCTCCAGCATCCAGTAGTAGACTGAAACAGC TACTTGGGTGCCCAAAGGTTTTGTGAGTACTAAAACGTCACCCACCTGCAGCTTGATCCGGCATAATATATTCTGAGTCGCTGCAAAACTGAAGTTGCcagca ] [-] EMBL CD080355 [ CCTTGAAGTAGTTTTAACCGATCGTTTAATGCCCTGGAGATTAACGCGCTTCCTTCAAGACACGGCAAANGTATGAATGCTAAAAGCTAAGTGATTGTTTGCCTGAACTTGGACTAAATTATTTGCATGACCCAAAAGACCGAAACCTGTTACGTCAGTACACCCATGA GCGTGATGTTTGTGCATTAGTCGAGCAGCTGTTCGATTTAAATGAGTCATAGAGAGAGTAGCGGAATGAAACAGACTCTTTACTTTATCTGACGTGATGACATTGGCTAGATTTCCAGACCAAGATGGACTGTCCTCCAGCATCCAGTAGTAGACTGAAACAGC TACTTGGGTGCCCAAAGGTTTTGTGAGTACTAAAACGTCACCCA CTGCAGCTTGATCCGGCATAATATATTCTGAGTCGCTGC AAACTGAAGTTGCTACGCCACCAATCATTAACCATGGACTCAATACAGTTTGTCCTCCACGAACATATGTTCCAGCTTCTGATGCACAGTCCTTAAAACCCTCCATCAATAAGCGATTTGATATTTCGCGTTCTTCTTGGGTCATTTCACGTGGAACACCCAACAGTAGAAGCAAATTATCACAGTCAACTACGCCCATTGCATACAAATCACTCAGTACATTACAGCC ] [+] EMBL CD097435 [ CAGACCAAGATGGACTGTCCTCCAGCATCCAGTAGTAGACTGAAACAGC TACTTGGGTGCCCAAAGGTTTTGTGAGTACTAAAACGTCACCCA CTGCAGCTTGATCCGGCATAATATATTCTGAGTCGCTGC AAACTGAAGTTGCTACGCCACCAATCATTAACCATGGACTCAATACAGTTTGTCCTCCACGAACATATGTTCCAGCTTCTGATGCACAGTCCTCAAAACCCTCCATCAATAAGCGATTTGATATTTCGCGTTCTTCTTGGGTCATTTCACGTGGAACACCCAACAGTAGAAGCAAATTATCACAGTCAACTACGCCCATTGCATACAAA ] [-] EMBL CD083654 [ TTGATATTTCGCGTTCTTCTTGGGTCATTTCACGAGGAACACCCAACAGTAGAAGCAAATTATCACAGTCAACTACGCCCATTGCATACAAATCACTCAGTACATTACAGCACGTAATTCGACCCATAGTGTAAGGATCATCAATCAGAGGATAAAAGAAGTCGGTTGTTTGGATAAGTTTCAAGTTATTTCGAATAGGAATAACACAACAATCGAGTTCCAATGCCAGTAACGGTTTATTACTTGAAAGTGAACATGGCTGAGGTTGATTCAGTGCCTCGAGCAATTTTTTCAGTTCAGCTTGAGGCACTTTACAACCTCATCCTCTCAGGAATGAAAATTTAGTTAGACGAAAGTCACTCCGAAGTCCATAAGATTCAGGGTTGAAAAACCCAGTCAGTTGGCGACGATCACCCGCACTCATACGTCGACGGAAATACAAAGAA AATTGATAGACGGTTCTGCCGACAACCCTCGTGC ] [-] EMBL AI976222 [ AAGAAGTCGGTTGTTTGGATAAGTTTCAAGTTATTTGGAATAGTAATAACGCAACAATCGAGTTCCAATGCCAGTAACGGTTTATTACTTGAAAGTGAACATGGCTGAGGTTGATTCAGTGCCTCGAGCAATTTTTTCAGTTCAGCTTGAGGCACTTTGCAACCTCATCCTCTCAGGAATGAGCATTTAGTTAGACGAAAGTCACTCCGAAGTCCATAAGATTCAGGGTTGAAAAACCCAGTCAGTTGTCGACGATCAGCCGCACTCATACGTTGGCGGAAATACAAAGAACATTTGATAGATGGTTCTGCCGACAACGAAGCAACGCGTGACTACAGAATTA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||