cluster # 10296

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Schistosoma mansoni
cluster # 10296 cluster # 10296 Sequences # 15 consensus # 11

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10296#0 length = 730 sequences # 4
consensus_10296#1 length = 643 sequences # 1
consensus_10296#2 length = 542 sequences # 2
consensus_10296#3 length = 425 sequences # 1
consensus_10296#4 length = 399 sequences # 1

consensus_10296#5 length = 362 sequences # 1
consensus_10296#6 length = 318 sequences # 1
consensus_10296#7 length = 301 sequences # 1
consensus_10296#8 length = 236 sequences # 1
consensus_10296#9 length = 148 sequences # 1
consensus_10296#10 length = 91 sequences # 1

consensusID : consensus_10296#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 730
fasta sequence

                              [CTAATGGTTCAACCATGGGGTCAAGCTTAGTCTTTCAATCACATATCTCCCATGATATCATGCATACGAATGGCTGTTACTTTGATGAAATGAATTCCCCTACTCATGATAATTTATCTGTTGAAACATCCGATTCACATTTGTGGTTTTCTGGAAAGTTAGAATCTAATTCTAATAAATCTACTTATCCTGTGTACGCTCATCAAAATGTTGATAGTTTAGATAGTCAGAGTCTAACTACACACCTTCCTTCGTCAACTGTGTCTCCTTCATCACTGGATTTAGGATCGTTTCCTTTTCCTAATCCTACTCAATGGACCATTGAAGAAGTTTACAACTACATTACGGCTCGTGATGCTACTCTCCTTGAAGCAGCGGAAAAATTCAAACATCATGAAATAGATGGCCAAGCACTTCTTCTTCTTAGCATGGAATCACTGCGTAATTATATGAAGATTAAATTGGGTCCTGCTTTGAAAATGGTTCATCTTATCAGTCGTCTAAAACGTGGGTTGTTGTAACTTCGCTATTCTTCGTGGTTTGACTTCTCTATTGGTCTTTATTTCATTTATAAAATCCGGACAACAAGGATATGTAGATGGTTAATGTTCCCAAATTTTCTTTAAAATATATGTGTATCTCTGTCAGTTTTCAATCTATTTTCTTAGTAACCAAATTGACACATCTTTTTGAGTTCAATGTAGTTGAATTTATTTGGTCAATATAACTT]

[+] EMBL CD136799             [CTAATGGTTCAACCATGGGGTCAAGCTTAGTCTTTCAATCACATATCTCCCATGATATCATGCATACGAATGGCTGTTACTTTGATGAAATGAATTCCCCTACTCATGATAATTTATCTGTTGAAACATCCGATTCACATTTGTGGTTTTCTGGAAAGTTAGAATCTAATTCTAATAAATCTACTTATCCTGTGTACGCTCATCAAAATGTTGATAGTTTAGATAGTCAGAGTCTAACTACACACCTTCCTTCGTCAACTGTGTCTCCTTCATCACTGGATTTAGGATCGTTTCCTTTTCCTAATCCTACTCAATGGACCATTGAAGAAGTTTACAACTACATTACGGCTCGTGATGCTACTCTCCTTGAAGCAGCGGAAAAATTCAAACATCATGAAATAGATGGCCAAGCACTTCTTCTTCTTAGCATGGAATCAC                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD147723             [                                                                                                                                                                                                                                                           TCGTCAACTGTGTCTCCTTCATCACTGGATTTAGGATCGTTTCCTTTTCCTAATCCTACTCAATGGACCATTGAAGAAGTTTACAACTACATTACGGCTCGTGATGCTACTCTCCTTGAAGCAGCGGAAAAATTCAAACATC                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL AI977532             [                                                                                                                                                                                                                                                                                            GGATCGTTTCCTTTTCCTAATCCTACTCAATGGACCATTGAAGAAGTTTACAACTACATTACGGCTCGTGATGCTACTCTCCTTGAAGCAGCGGAAAAATTCAAACATCATGAAATAGATGGCCAAGCACTTCTTCTTCTTAGCATGGAATCACTGCGTAATTATATGAAGATTAAATTGGGTCCTGCTTTGAAAATGGTTCATCTTATCAGTCGTCTAAAACGTGGGTTGTTGTAACTTCGCTATTCTTCGTGGTTTGACTTCTCTATTGGTCTTTATTTCATTTATAAAATCCGGACAACAAGGATATGTAGATGGTTAATGTTCCCAAATTTTCTTTAAAATATATGTGTATCTCTGTCAGTTTTCAATCTATTTTCTTAGTAACCAAATTGACACATCTTTTTGAGTTCAATGTAGTTGAATTTATTTGGTCAATATAACTT]
[-] EMBL SMW762               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTCCTGCTTTGAAAATGGTTCATCTTATCAGTCGTCTAAAACGTGGGTTGTTGTAACTTCGCTATTCNTCGTGGTTTGACNTCTCTATTGGTCTTTATTTCATTTATAAAATCCGGACAACAAGGATATGTAGATGGTTAATGTTCCCAAATTTTCTTTAAAATATATGTGTATCTCTGTCAGTTTTCAATCTATTTTCTTAGTAACCAAATTGACACATCTTTTTGAGTTCAATGTAGTTGAATTTATTTGGTCAATATAACTT]




>consensus_10296#0
CTAATGGTTCAACCATGGGGTCAAGCTTAGTCTTTCAATCACATATCTCCCATGATATCA
TGCATACGAATGGCTGTTACTTTGATGAAATGAATTCCCCTACTCATGATAATTTATCTG
TTGAAACATCCGATTCACATTTGTGGTTTTCTGGAAAGTTAGAATCTAATTCTAATAAAT
CTACTTATCCTGTGTACGCTCATCAAAATGTTGATAGTTTAGATAGTCAGAGTCTAACTA
CACACCTTCCTTCGTCAACTGTGTCTCCTTCATCACTGGATTTAGGATCGTTTCCTTTTC
CTAATCCTACTCAATGGACCATTGAAGAAGTTTACAACTACATTACGGCTCGTGATGCTA
CTCTCCTTGAAGCAGCGGAAAAATTCAAACATCATGAAATAGATGGCCAAGCACTTCTTC
TTCTTAGCATGGAATCACTGCGTAATTATATGAAGATTAAATTGGGTCCTGCTTTGAAAA
TGGTTCATCTTATCAGTCGTCTAAAACGTGGGTTGTTGTAACTTCGCTATTCTTCGTGGT
TTGACTTCTCTATTGGTCTTTATTTCATTTATAAAATCCGGACAACAAGGATATGTAGAT
GGTTAATGTTCCCAAATTTTCTTTAAAATATATGTGTATCTCTGTCAGTTTTCAATCTAT
TTTCTTAGTAACCAAATTGACACATCTTTTTGAGTTCAATGTAGTTGAATTTATTTGGTC
AATATAACTT

consensusID : consensus_10296#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 643
fasta sequence

                              [TCGNGCCGAGGACGACTGAACGTCCAGTACCCAATGCTATTCAATTTGACTAACCAACAAGCAAACCGGACTACTCATTGTGGTGTATTAGAATTTGTTGCAGATGAAGGGAGGATTTATGTTCCTTACTGGATGCTAAAAAATCTACATTTGGAAGAGGGTGGTTTGGTCTCTGTAGTTAATGCAGCCTTGCCTGTAGCTTCTTTCGCTCGTTTTCAGCCTCAGAGTACTGATTTTCTGGATATATCCAACCCCAAAGCTGTGTAATTTTATTCTCAACTTATAATCATATTTAGACTAGAAAATGCTCTTCGCGACTTTGCTTGCCTCACAGTCGGAGATATCATTGCTATCAACTACAATGAGCGTATATATGAGCTTAAAGTGTTGGAAACAAAACCGAAGGATGCAGTCACCATAATCGAATGTGACATGAGCGTTGATTTCGCACCTCCAGTTGGATATCAGCCTACTGACTCTAGTTCTTCGAGCAAACAAAGTGATAAAGATCTACATCAGATCGAAGAAGATATAAAAATCCCTTCAGTTGTTCAAGGATTTCAGGCATTTAGCGGTACAGGTTATCGGTTAGATGGGAAAAANTAACAGNGATAAACTGATGAAGCAGATAATGGTCAATCAT]

[+] EMBL CD083154             [TCGNGCCGAGGACGACTGAACGTCCAGTACCCAATGCTATTCAATTTGACTAACCAACAAGCAAACCGGACTACTCATTGTGGTGTATTAGAATTTGTTGCAGATGAAGGGAGGATTTATGTTCCTTACTGGATGCTAAAAAATCTACATTTGGAAGAGGGTGGTTTGGTCTCTGTAGTTAATGCAGCCTTGCCTGTAGCTTCTTTCGCTCGTTTTCAGCCTCAGAGTACTGATTTTCTGGATATATCCAACCCCAAAGCTGTGTAATTTTATTCTCAACTTATAATCATATTTAGACTAGAAAATGCTCTTCGCGACTTTGCTTGCCTCACAGTCGGAGATATCATTGCTATCAACTACAATGAGCGTATATATGAGCTTAAAGTGTTGGAAACAAAACCGAAGGATGCAGTCACCATAATCGAATGTGACATGAGCGTTGATTTCGCACCTCCAGTTGGATATCAGCCTACTGACTCTAGTTCTTCGAGCAAACAAAGTGATAAAGATCTACATCAGATCGAAGAAGATATAAAAATCCCTTCAGTTGTTCAAGGATTTCAGGCATTTAGCGGTACAGGTTATCGGTTAGATGGGAAAAANTAACAGNGATAAACTGATGAAGCAGATAATGGTCAATCAT]




>consensus_10296#1
TCGNGCCGAGGACGACTGAACGTCCAGTACCCAATGCTATTCAATTTGACTAACCAACAA
GCAAACCGGACTACTCATTGTGGTGTATTAGAATTTGTTGCAGATGAAGGGAGGATTTAT
GTTCCTTACTGGATGCTAAAAAATCTACATTTGGAAGAGGGTGGTTTGGTCTCTGTAGTT
AATGCAGCCTTGCCTGTAGCTTCTTTCGCTCGTTTTCAGCCTCAGAGTACTGATTTTCTG
GATATATCCAACCCCAAAGCTGTGTAATTTTATTCTCAACTTATAATCATATTTAGACTA
GAAAATGCTCTTCGCGACTTTGCTTGCCTCACAGTCGGAGATATCATTGCTATCAACTAC
AATGAGCGTATATATGAGCTTAAAGTGTTGGAAACAAAACCGAAGGATGCAGTCACCATA
ATCGAATGTGACATGAGCGTTGATTTCGCACCTCCAGTTGGATATCAGCCTACTGACTCT
AGTTCTTCGAGCAAACAAAGTGATAAAGATCTACATCAGATCGAAGAAGATATAAAAATC
CCTTCAGTTGTTCAAGGATTTCAGGCATTTAGCGGTACAGGTTATCGGTTAGATGGGAAA
AANTAACAGNGATAAACTGATGAAGCAGATAATGGTCAATCAT

consensusID : consensus_10296#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 542
fasta sequence

                              [TTTTTTTTTTTTTTTTAGAAAAAGATAGAAATTTATTAAAAAGTAAAAAATAACTAGCAAAAAATACATGATCACAGAAGTAAAAGTGAAAGGAACTCTCTCTTTAAAATTATTACTAGTTAGTTGTATATATGAATAATTTTTTTCTGGTTAGCGTTTTTTTTAGCGAGTTGGTTTTCTACGGGATGGGGTCGCTAACCAGATGTACAACCCTCTTCCTTTACCCAGGCTTGGGACCGGAAGTAGCCCCCAGAGGAGCTACAGGCGGAATGAATGAACAAAAACTGGATAGAAGTAAAAAAGAAGGCCCAGGACAGAGTGGGTTGNGACAATGCTNGGTCGGCGG-TAATGCTCCATTGGGAGTAACA-GCGTAAGTAAGTAAAGT-ATCCAATTTATATATGAATTAAGAATTC-AAAGTATGCATTTTG-GAATT-TANAAAAGCATTATAAT-TTT-ACTTCCAGA-GAAG-ATTTCTTGGGACCCCCATGAGGCCCTCTGCGATATTTGTGCGCCCAGGCGATATTCCCATAGGAGGGCCATTATTT]

[+] EMBL AI395683             [TTTTTTTTTTTTTTTTAGAAAAAGATAGAAATTTATTAAAAAGTAAAAAATAACTAGCAAAAAATACATGATCACAGAAGTAAAAGTGAAAGGAACTCTCTCTTTAAAATTATTACTAGTTAGTTGTATATATGAATAATTTTTTTCTGGTTAGCGTTTTTTTTAGCGAGTTGGTTTTCTACGGGATGGGGTCGCTAACCAGATGTACAACCCTCTTCCTTTACCCAGGCTTGGGACCGGAAGTAGCCCCCAGAGGAGCTACAGGCGGAATGAATGAACAAAAACTGGATAGAAGTAAAAAAGAAGGCCCAGGACAGAGTGGGTTGNGACAATGCTNGGTCGGCGG TAATGCTCCATTGGGAGTAACA GCGTAAGTAAGTAAAGT ATCCAATTTATATATGAATTAAGAATTC AAAGTATGCATTTTG GAATT TANAAAAGCATTATAAT TTT ACTTCCAGA GAAG ATTTCTTGGGACCCCCATGAGGCCCTCTGCGATATTTGTGCGCCCAGGCGATATTCCCATAGGAGGGCCATTATTT]
[-] EMBL CD092164             [                                                                                                                                        TAATTTTTTTCTGGTTAGCGTTTTTTTTAGCGAGTTGGTTTTCTACGGGATGGGGTCGCTAACCAGATGTACAACCCTCTTCCTTTACCCAGGCTTGGGACCGGAAGTAGCCCCCAGAGGAGCTACAGGCGGAATGAATGAACAAAAACTGGATAGAAGTAAAAAAGAAGGCCCAGGACAGAGTGGGTTG GACAATGCT GGTCGGCGGCTAATGCTCCATTGGGAGTAACAGGCGTAAGTAAGTAAAGTAATCC ACTTATATATGAATAAAGAAATCAAAAGTATGCAATTTGATAATTAAAAAAAAGCATTAAAATATTTCAATTCCAGAGGAAGTATTTCT                                                                      ]




>consensus_10296#2
TTTTTTTTTTTTTTTTAGAAAAAGATAGAAATTTATTAAAAAGTAAAAAATAACTAGCAA
AAAATACATGATCACAGAAGTAAAAGTGAAAGGAACTCTCTCTTTAAAATTATTACTAGT
TAGTTGTATATATGAATAATTTTTTTCTGGTTAGCGTTTTTTTTAGCGAGTTGGTTTTCT
ACGGGATGGGGTCGCTAACCAGATGTACAACCCTCTTCCTTTACCCAGGCTTGGGACCGG
AAGTAGCCCCCAGAGGAGCTACAGGCGGAATGAATGAACAAAAACTGGATAGAAGTAAAA
AAGAAGGCCCAGGACAGAGTGGGTTGNGACAATGCTNGGTCGGCGGTAATGCTCCATTGG
GAGTAACAGCGTAAGTAAGTAAAGTATCCAATTTATATATGAATTAAGAATTCAAAGTAT
GCATTTTGGAATTTANAAAAGCATTATAATTTTACTTCCAGAGAAGATTTCTTGGGACCC
CCATGAGGCCCTCTGCGATATTTGTGCGCCCAGGCGATATTCCCATAGGAGGGCCATTAT
TT

consensusID : consensus_10296#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 425
fasta sequence

                              [GGTGTATAAGCGATCGGAGAGAGATGTGAAACATGAGTGAAAGCTTTACTCCACGGTTAATCGAATTTATTCATAGGTTTCCAGATGACATTTACAAACTTACTAAATATAAGAGACTGACCAGTTTCAGTCGTAAACATCAATAGGAAGGTTCAAACAAGTAACACTAAGTGAATTTAAACTTCACCCCATTGCACAAACAAGTGGCTATCAGGACTCAGTAGCTGAGTGGATAACGCGATGGCGTTTGAAGCGAACGGTACTGGATTCGAGTCCCAGAGTGAACATCAACTCTGAGATGCAGGTACATCCAGGTGACGAGTCCCAAATAGGACAACGAAACGCGTGTCCTAGATTCCCCTGCTAGCCACTATCCATCTTTGCTTACTAAATATAGTTATAAAATGGGTAGATATCAAACTGGA]

[+] EMBL CD067543             [GGTGTATAAGCGATCGGAGAGAGATGTGAAACATGAGTGAAAGCTTTACTCCACGGTTAATCGAATTTATTCATAGGTTTCCAGATGACATTTACAAACTTACTAAATATAAGAGACTGACCAGTTTCAGTCGTAAACATCAATAGGAAGGTTCAAACAAGTAACACTAAGTGAATTTAAACTTCACCCCATTGCACAAACAAGTGGCTATCAGGACTCAGTAGCTGAGTGGATAACGCGATGGCGTTTGAAGCGAACGGTACTGGATTCGAGTCCCAGAGTGAACATCAACTCTGAGATGCAGGTACATCCAGGTGACGAGTCCCAAATAGGACAACGAAACGCGTGTCCTAGATTCCCCTGCTAGCCACTATCCATCTTTGCTTACTAAATATAGTTATAAAATGGGTAGATATCAAACTGGA]




>consensus_10296#3
GGTGTATAAGCGATCGGAGAGAGATGTGAAACATGAGTGAAAGCTTTACTCCACGGTTAA
TCGAATTTATTCATAGGTTTCCAGATGACATTTACAAACTTACTAAATATAAGAGACTGA
CCAGTTTCAGTCGTAAACATCAATAGGAAGGTTCAAACAAGTAACACTAAGTGAATTTAA
ACTTCACCCCATTGCACAAACAAGTGGCTATCAGGACTCAGTAGCTGAGTGGATAACGCG
ATGGCGTTTGAAGCGAACGGTACTGGATTCGAGTCCCAGAGTGAACATCAACTCTGAGAT
GCAGGTACATCCAGGTGACGAGTCCCAAATAGGACAACGAAACGCGTGTCCTAGATTCCC
CTGCTAGCCACTATCCATCTTTGCTTACTAAATATAGTTATAAAATGGGTAGATATCAAA
CTGGA

consensusID : consensus_10296#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 399
fasta sequence

                              [AGATTGAGAAGATTCAATTGAAGAGAACAGAAAGTGATTGTATTAACAACAGAATTCAGGGAATCATGAAGCATATAAAGAACAATTGATGGAAGATGTGCAGACGATGTATTTAATGTATGGTTTTCATATTTTACAAAGATATTCCGAAATAAATTGGCCACCCCTGCCAAGTCCCGTTCGCCACATTTGAGGTCACTGCCAAACGGAGGGCGGAGAGAGTGCAGTTCTGCGGACGCTATCACAGAGTTGGAAGGGAAGTTGCCAGCTGAGGTAGTCTCGTGCAGGGAGGGATGGCGTTGGCTGTAGCAGTTGCTGTCGACGGAGAGAAGCAGTGGGACGGTGCGGCTACTGGGCGGACATCGAATGTTGATAGCTCAGTGGGGTCCTGGAGCGCCC]

[+] EMBL CD198498             [AGATTGAGAAGATTCAATTGAAGAGAACAGAAAGTGATTGTATTAACAACAGAATTCAGGGAATCATGAAGCATATAAAGAACAATTGATGGAAGATGTGCAGACGATGTATTTAATGTATGGTTTTCATATTTTACAAAGATATTCCGAAATAAATTGGCCACCCCTGCCAAGTCCCGTTCGCCACATTTGAGGTCACTGCCAAACGGAGGGCGGAGAGAGTGCAGTTCTGCGGACGCTATCACAGAGTTGGAAGGGAAGTTGCCAGCTGAGGTAGTCTCGTGCAGGGAGGGATGGCGTTGGCTGTAGCAGTTGCTGTCGACGGAGAGAAGCAGTGGGACGGTGCGGCTACTGGGCGGACATCGAATGTTGATAGCTCAGTGGGGTCCTGGAGCGCCC]




>consensus_10296#4
AGATTGAGAAGATTCAATTGAAGAGAACAGAAAGTGATTGTATTAACAACAGAATTCAGG
GAATCATGAAGCATATAAAGAACAATTGATGGAAGATGTGCAGACGATGTATTTAATGTA
TGGTTTTCATATTTTACAAAGATATTCCGAAATAAATTGGCCACCCCTGCCAAGTCCCGT
TCGCCACATTTGAGGTCACTGCCAAACGGAGGGCGGAGAGAGTGCAGTTCTGCGGACGCT
ATCACAGAGTTGGAAGGGAAGTTGCCAGCTGAGGTAGTCTCGTGCAGGGAGGGATGGCGT
TGGCTGTAGCAGTTGCTGTCGACGGAGAGAAGCAGTGGGACGGTGCGGCTACTGGGCGGA
CATCGAATGTTGATAGCTCAGTGGGGTCCTGGAGCGCCC

consensusID : consensus_10296#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 362
fasta sequence

                              [TCAACGACATCACGGATCAATGCAACGCCTTGGTTTAGTTGCGCCCTAATTTCTTTCAGCTTGCCTCACACAGCAGATAACACCACCCGTCGAAGTAGCGGGCGACTGTGCATACACAGCACATGGGTGTTTTAAATTGGGTAAGTAAAACTAACAGATCTGTTGTATCTTTATATTCGAAACATGCTCGGAAATACTCTTCTCTAGAGATGAGCTGGATGCGGCAGTGGCCATTTCCTGTTCAAAGTCAAGAGCCACATAACACAGTTTCTCCTTGATGTCACGCACGATTTCTCGCTCAGCTGTTGTCGTGAAACTGTAACCACGTTCCGTCAGGATCTTCATCAAGTAGTCGGTCAAAT]

[+] EMBL CD139411             [TCAACGACATCACGGATCAATGCAACGCCTTGGTTTAGTTGCGCCCTAATTTCTTTCAGCTTGCCTCACACAGCAGATAACACCACCCGTCGAAGTAGCGGGCGACTGTGCATACACAGCACATGGGTGTTTTAAATTGGGTAAGTAAAACTAACAGATCTGTTGTATCTTTATATTCGAAACATGCTCGGAAATACTCTTCTCTAGAGATGAGCTGGATGCGGCAGTGGCCATTTCCTGTTCAAAGTCAAGAGCCACATAACACAGTTTCTCCTTGATGTCACGCACGATTTCTCGCTCAGCTGTTGTCGTGAAACTGTAACCACGTTCCGTCAGGATCTTCATCAAGTAGTCGGTCAAAT]




>consensus_10296#5
TCAACGACATCACGGATCAATGCAACGCCTTGGTTTAGTTGCGCCCTAATTTCTTTCAGC
TTGCCTCACACAGCAGATAACACCACCCGTCGAAGTAGCGGGCGACTGTGCATACACAGC
ACATGGGTGTTTTAAATTGGGTAAGTAAAACTAACAGATCTGTTGTATCTTTATATTCGA
AACATGCTCGGAAATACTCTTCTCTAGAGATGAGCTGGATGCGGCAGTGGCCATTTCCTG
TTCAAAGTCAAGAGCCACATAACACAGTTTCTCCTTGATGTCACGCACGATTTCTCGCTC
AGCTGTTGTCGTGAAACTGTAACCACGTTCCGTCAGGATCTTCATCAAGTAGTCGGTCAA
AT

consensusID : consensus_10296#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 318
fasta sequence

                              [AACTGTAGGAACAGAAATTATTTCCAATTGTTTCGAAACCTCAGAAACGACTTCCGCGTCTACATGTACAAACAAAATTCCGGAATTCACTGTATCTTCCTTAAGTGTTTTTAGGACATTGTGTACCTGATCACATTGAGGCACATTGGGGGACGAGAAGAAAACTACTAATTTTCGTTCGTTTTTTATCAACCTTCGGAGTTCAATCCCAGCATTGACAACAAGGAGAGACATCGTGTAACACTGTGCTCAGATATATTCTTACTGAATATCAAGAGAGAACACGGTGGGAATCACGAGCCTTTTTATTCCAAAATC]

[+] EMBL CD098156             [AACTGTAGGAACAGAAATTATTTCCAATTGTTTCGAAACCTCAGAAACGACTTCCGCGTCTACATGTACAAACAAAATTCCGGAATTCACTGTATCTTCCTTAAGTGTTTTTAGGACATTGTGTACCTGATCACATTGAGGCACATTGGGGGACGAGAAGAAAACTACTAATTTTCGTTCGTTTTTTATCAACCTTCGGAGTTCAATCCCAGCATTGACAACAAGGAGAGACATCGTGTAACACTGTGCTCAGATATATTCTTACTGAATATCAAGAGAGAACACGGTGGGAATCACGAGCCTTTTTATTCCAAAATC]




>consensus_10296#6
AACTGTAGGAACAGAAATTATTTCCAATTGTTTCGAAACCTCAGAAACGACTTCCGCGTC
TACATGTACAAACAAAATTCCGGAATTCACTGTATCTTCCTTAAGTGTTTTTAGGACATT
GTGTACCTGATCACATTGAGGCACATTGGGGGACGAGAAGAAAACTACTAATTTTCGTTC
GTTTTTTATCAACCTTCGGAGTTCAATCCCAGCATTGACAACAAGGAGAGACATCGTGTA
ACACTGTGCTCAGATATATTCTTACTGAATATCAAGAGAGAACACGGTGGGAATCACGAG
CCTTTTTATTCCAAAATC

consensusID : consensus_10296#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 301
fasta sequence

                              [AATATTCTTTTCAGGAAATTCTCTTCAGGTTCTACAATTATGTATCCAAATTAATGATCCGAAAAGTGATCAGATTTAATGCAAAGTACATCGTTTAAAAATATATTATTCTTATTTAATGTCTTACATCAACTAGGCACCCGAATACGGTGAAACTATTCGCTCTAATCTAGACGAGAGTTCTTATATGAATTCAGGATTGTTGAATACAACAAAACTGTTAATAATGAAATGACTAATTTGTAATGTTAACTTGAATATGCTTATACTTTAAATGGAATAATGGGATTTATGATCAGAA]

[+] EMBL CD152564             [AATATTCTTTTCAGGAAATTCTCTTCAGGTTCTACAATTATGTATCCAAATTAATGATCCGAAAAGTGATCAGATTTAATGCAAAGTACATCGTTTAAAAATATATTATTCTTATTTAATGTCTTACATCAACTAGGCACCCGAATACGGTGAAACTATTCGCTCTAATCTAGACGAGAGTTCTTATATGAATTCAGGATTGTTGAATACAACAAAACTGTTAATAATGAAATGACTAATTTGTAATGTTAACTTGAATATGCTTATACTTTAAATGGAATAATGGGATTTATGATCAGAA]




>consensus_10296#7
AATATTCTTTTCAGGAAATTCTCTTCAGGTTCTACAATTATGTATCCAAATTAATGATCC
GAAAAGTGATCAGATTTAATGCAAAGTACATCGTTTAAAAATATATTATTCTTATTTAAT
GTCTTACATCAACTAGGCACCCGAATACGGTGAAACTATTCGCTCTAATCTAGACGAGAG
TTCTTATATGAATTCAGGATTGTTGAATACAACAAAACTGTTAATAATGAAATGACTAAT
TTGTAATGTTAACTTGAATATGCTTATACTTTAAATGGAATAATGGGATTTATGATCAGA
A

consensusID : consensus_10296#8
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 236
fasta sequence

                              [TCTAAGTTTTAATCTAATATGTTTTATGTTTAGGTGTGATGATTGGTTTAGTATTTATAAATTTTATTGTTGGGCTTTTCTATTAGTATATATTTTGCTTAATCACAATTAAAAAAAAAAAAAAAATCTCAGGCCAATTCCGTTAACCAATTGGCCCTATAGGGGTTAGGTTCCGGTTAAACTTACCTTCGTGCCTTACAGATCGGAGGTCAAGGCCGGATTCCGTACCACTAGTC]

[+] EMBL AA952814             [TCTAAGTTTTAATCTAATATGTTTTATGTTTAGGTGTGATGATTGGTTTAGTATTTATAAATTTTATTGTTGGGCTTTTCTATTAGTATATATTTTGCTTAATCACAATTAAAAAAAAAAAAAAAATCTCAGGCCAATTCCGTTAACCAATTGGCCCTATAGGGGTTAGGTTCCGGTTAAACTTACCTTCGTGCCTTACAGATCGGAGGTCAAGGCCGGATTCCGTACCACTAGTC]




>consensus_10296#8
TCTAAGTTTTAATCTAATATGTTTTATGTTTAGGTGTGATGATTGGTTTAGTATTTATAA
ATTTTATTGTTGGGCTTTTCTATTAGTATATATTTTGCTTAATCACAATTAAAAAAAAAA
AAAAAATCTCAGGCCAATTCCGTTAACCAATTGGCCCTATAGGGGTTAGGTTCCGGTTAA
ACTTACCTTCGTGCCTTACAGATCGGAGGTCAAGGCCGGATTCCGTACCACTAGTC

consensusID : consensus_10296#9
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 148
fasta sequence

                              [TAACGAAAATATCTACTAATAGAAAACCCAACAATAAAATTTATAAATACTAAACCAATCATCAACACTAAACATAAAAACAAATAGATTAAAACTTCTGGTAACTCCCATCTATTAAATTAAATACCAATATCTCCTATTTATATCC]

[+] EMBL AA999370             [TAACGAAAATATCTACTAATAGAAAACCCAACAATAAAATTTATAAATACTAAACCAATCATCAACACTAAACATAAAAACAAATAGATTAAAACTTCTGGTAACTCCCATCTATTAAATTAAATACCAATATCTCCTATTTATATCC]




>consensus_10296#9
TAACGAAAATATCTACTAATAGAAAACCCAACAATAAAATTTATAAATACTAAACCAATC
ATCAACACTAAACATAAAAACAAATAGATTAAAACTTCTGGTAACTCCCATCTATTAAAT
TAAATACCAATATCTCCTATTTATATCC

consensusID : consensus_10296#10
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 91
fasta sequence

                              [TCTTCCTTACTTGCATCGGATTTACATAACTATGGGTCATACAAATTTTAACACATATGTTAAGATAGGATGCCGTAGGACAAAAACGTCC]

[+] EMBL SM3851               [TCTTCCTTACTTGCATCGGATTTACATAACTATGGGTCATACAAATTTTAACACATATGTTAAGATAGGATGCCGTAGGACAAAAACGTCC]




>consensus_10296#10
TCTTCCTTACTTGCATCGGATTTACATAACTATGGGTCATACAAATTTTAACACATATGT
TAAGATAGGATGCCGTAGGACAAAAACGTCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10296#2       ------------------------------------------------------------
consensus_10296#9       ------------------------------------------------------------
consensus_10296#4       ------------------------------------------------------------
consensus_10296#10      ------------------------------------------------------------
consensus_10296#6       ------------------------------------------------------------
consensus_10296#8       ------------------------------------------------------------
consensus_10296#7       ------------------------------------------------------------
consensus_10296#1       ------------------------------------------------------------
consensus_10296#3       ------------------------------------------------------------
consensus_10296#0       CTAATGGTTCAACCATGGGGTCAAGCTTAGTCTTTCAATCACATATCTCCCATGATATCA 60
consensus_10296#5       ------------------------------------------------------------
                                                                                    

consensus_10296#2       -----------------------------------TTTTTTTTTTTTTTTTAGAAAAAGA 25
consensus_10296#9       ------------------------------------------------------------
consensus_10296#4       ------------------------------------------------------------
consensus_10296#10      ------------------------------------------------------------
consensus_10296#6       ------------------------------------------------------------
consensus_10296#8       ------------------------------------------------------------
consensus_10296#7       ------------------------------------------------------------
consensus_10296#1       --------------TCGNGCCGAGGACGACTGAACGTCCAGTACCCAATGCTATTCAATT 46
consensus_10296#3       ------------------------------------------------------------
consensus_10296#0       TGCATACGAATGGCTGTTACTTTGATGAAATGAATTCCCCTACTCATGATAATTTATCTG 120
consensus_10296#5       ------------------------------------------------------------
                                                                                    

consensus_10296#2       TAGAAATTTATTAAAAAGTAAAAAATAACTAGCAAAAAATACATGATCACAGAAGTAAAA 85
consensus_10296#9       ------------------------------------------------------------
consensus_10296#4       ------------------------------------------------------------
consensus_10296#10      ------------------------------------------------------------
consensus_10296#6       ------------------------------------------------------------
consensus_10296#8       ------------------------------------------------------------
consensus_10296#7       ------------------------------------------------------------
consensus_10296#1       TGACTAACCAACAAGCAAACCGGACTACTCATTGTGGTGTATTAGAATTTGTTGCAGATG 106
consensus_10296#3       ------------------------------------------------------------
consensus_10296#0       TTGAAACATCCGATTCACATTTGTGGTTTTCTGGAAAGTTAGAATCTAATTCTAATAAAT 180
consensus_10296#5       ------------------------------------------------------------
                                                                                    

consensus_10296#2       GTGAAAGGAACTCTCTCTTTAAAATTATTACTAGTTAGTTGTATATATGAATAATTTTTT 145
consensus_10296#9       ------------------------------------------------------------
consensus_10296#4       ------------------------------------------------------------
consensus_10296#10      ------------------------------------------------------------
consensus_10296#6       ------------------------------------------------------------
consensus_10296#8       ------------------------------------------------------------
consensus_10296#7       ------------------------------------------------------------
consensus_10296#1       AAGGGAGGATTTATGTTCCTTACTGGATGCTAAAAAATCTACATTTGGAAGAGGGTGGTT 166
consensus_10296#3       ---------------------------------GGTGTATAAGCGATCGGAGAGAGATGT 27
consensus_10296#0       CTACTTATCCTGTGTACGCTCATCAAAATGTTGATAGTTTAGATAGTCAGAGTCTAACTA 240
consensus_10296#5       ------------------------------------------------------------
                                                                                    

consensus_10296#2       TCTGGTTAGCGTTTTTTTTAGCGAGTTGGTTTTCTACGGGATGGGGTCGCTAACCAGATG 205
consensus_10296#9       ------------------------------------------------------------
consensus_10296#4       ----------------AGATTGAGAAGATTCAATTGAAGAGAACAGAAAGTGATTGTATT 44
consensus_10296#10      -------------------------------------------------TCTTCCTTACT 11
consensus_10296#6       --------------------------------AACTGTAGGAACAGAAATTATTTCCAAT 28
consensus_10296#8       --------------------------------------------------TCTAAGTTTT 10
consensus_10296#7       ------------------------------------------------AATATTCTTTTC 12
consensus_10296#1       TGGTCTCTGTAGTTAATGCAGCCTTGCCTGTAGCTTCTTTCGCTCGTTTTCAGCCTCAGA 226
consensus_10296#3       GAAACATGAGTGAAAGCTTTACTCCACGGTTAATCGAATTTATTCATAGGTTTCCAGATG 87
consensus_10296#0       CACACCTTCCTTCGTCAACTGTGTCTCCTTCATCACTGGATTTAGGATCGTTTCCTTTTC 300
consensus_10296#5       --------------------TCAACGACATCACGGATCAATGCAACGCCTTGGTTTAGTT 40
                                                                                    

consensus_10296#2       TACAACCCTCTTCCTTTACCCAGGCTT-GGGACCGGAAGTAGC----CCCCAGAGGAGCT 260
consensus_10296#9       ------------------------------------------------------------
consensus_10296#4       AACAACAGAATTCAGGGAATCATGAAG-CATATAAAGAACAAT----TGATGGAAGATGT 99
consensus_10296#10      TGCATCGGA-TTTACATAACTATGGGT-CATACAAATTTTAAC----ACATATGTTAAGA 65
consensus_10296#6       TGTTTCGAAACCTCAGAAACGAC-TTC-CGCGTCTACATGTAC----AAACAAAATTCCG 82
consensus_10296#8       AATCTAATATGTTTTATGTTTAGGTGT-GATGATTGGTTTAGT----ATTTATAAATTTT 65
consensus_10296#7       AGGAAATTCTCTTCAGGTTCTACAATTATGTATCCAAATTAATG---ATCCGAAAAGTGA 69
consensus_10296#1       GTACTGATTTTCTGGATATATCCAACCCCAAAGCTGTGTAATTTTATTCTCAACTTATAA 286
consensus_10296#3       ACATTTACAAACTTACTAAATATAAGAGACTGACCAGTTTCAGTCGTAAACATCAATAGG 147
consensus_10296#0       CTAATCCTACTCAATGGACCATTGAAGAAGTTTACAACTACATTACGGCTCGTGATGCTA 360
consensus_10296#5       GCGCCCTAATTTCTTTCAGCTTGCCTCACACAGCAGATAACACCACCCGTCGAAGTAGCG 100
                                                                                    

consensus_10296#2       ACAGGCGGAATG-AATGAACAAAAACTGGATAGAAGTAAAAAAGAAGGCCCAGGACAGAG 319
consensus_10296#9       ------------------------------------------------------------
consensus_10296#4       GCAGACGATGT--ATTTAATGTATGGTTTTCATATTTTACAAAGATATTCCGAAATAAAT 157
consensus_10296#10      TAGGATGCCGT--AGGACAAAAACGTCC-------------------------------- 91
consensus_10296#6       GAATTCACTGTATCTTCCTTAAGTGTTTTTAGGACATTGTGTACCTGATCACATTGAGGC 142
consensus_10296#8       ATTGTTGGGCT--TTTCTATTAGTATATATTTTGCTTAATCACAATTAAAAAAAAAAAAA 123
consensus_10296#7       TCAGATTTAATGCAAAGTACATCGTTTAAAAATATATTATTCTTATTTAATGTCTTACAT 129
consensus_10296#1       TCATATTTAGACTAGAAAATGCTCTTCGCGACTTTGCTTGCCTCACAGTCGGAGATATCA 346
consensus_10296#3       AAGGTTCAAACAAGTAACACTAAGTGAATTTAAACTTCACCCCATTGCACAAACAAGTGG 207
consensus_10296#0       CTCTCCTTGAA--GCAGCGGAAAAATTCAAACATCATGAAATAGATGGCCAAGCACTTCT 418
consensus_10296#5       GGCGACTGTGCATACACAGCACATGGGTGTTTTAAATTGGGTAAGTAAAACTAACAGATC 160
                                                                                    

consensus_10296#2       TGGGTTGNGACAATGCTNGGTCGGCGGTAATGCTCCATTGGGAGTAACAGCGTAAGTAA- 378
consensus_10296#9       --------------------------------------------------------TAA- 3
consensus_10296#4       TGGCCACCCCTGCCAAGTCCCGTTCGCCACATTTGAGGTCACTGCCAAACGGAGGGCGG- 216
consensus_10296#10      ------------------------------------------------------------
consensus_10296#6       ACATTGGGGGACGAGAAGAAAACTACTAATTTTCGTTCGTTTTTTATCAACCTTCGGAG- 201
consensus_10296#8       AAATCTCAGGCCAATTCCGTTAACCAATTGGCCCTATAGGGGTTAGGTTCCGGTTAAAC- 182
consensus_10296#7       CAACTAGGCACC-CGAATACGGTGAAACTATTCGCTCTAATCTAGACGAGAGTTCTTAT- 187
consensus_10296#1       TTGCTATCAACTACAATGAGCGTATATATGAGCTTAAAGTGTTGGAAACAAAACCGAAGG 406
consensus_10296#3       CTATCAGGACTCAGTAGCTGAGTGGATAACGCGATGGCGTTTGAAGCGAACGGTACTGGA 267
consensus_10296#0       TCTTCTTAGCATGGAATCACTGCGTAATTATATGAAGATTAAATTGGGTCCTGCTTTGA- 477
consensus_10296#5       TGTTGTATCTTTATATTCGAAACATGCTCGGAAATACTCTTCTCTAGAGATGAGCTGGAT 220
                                                                                    

consensus_10296#2       -GTAAAGTATCCAATT-TATATATGAATTAAGAATTC-AAAGTATGCATTTTGGAATTTA 435
consensus_10296#9       -CGAAAATATCTA-CT-AATAGAAAACCCAACAATAA-AATTTATAAATACTAAACCAAT 59
consensus_10296#4       -AGAGAGTGCAGTTCTGCGGACGCTATCACAGAGTTG-GAAGGGAAGTTGCCAGCTGAGG 274
consensus_10296#10      ------------------------------------------------------------
consensus_10296#6       -TTCAATCCCAGCATTGACAACAAGGAGAGACATCGT-GTAACACTGTGCTCAGATATAT 259
consensus_10296#8       -TTACCTTCGTGCCTTACAGATCGGAGGTCAAGGCCG-GATTCCGTACCACTAGTC---- 236
consensus_10296#7       -ATGAATTCAGGATTGTTGAATACAACAAAACTGTTA-ATAATGAAATGACTAATTTGTA 245
consensus_10296#1       -ATGCAGTCACCATAATCGAATGTGACATGAGCGTTG-ATTTCGCACCTCCAGTTGGATA 464
consensus_10296#3       -TTCGAGTCCCAGAGTGAACATCAACTCTGAGATGCA-GGTACATCCAGGTGACGAGTCC 325
consensus_10296#0       ---AAATGGTTCATCTTATCAGTCGTCTAAAACGTGG-GTTGTTGTAACTTCGCTATTCT 533
consensus_10296#5       GCGGCAGTGGCCATTTCCTGTTCAAAGTCAAGAGCCACATAACACAGTTTCTCCTTGATG 280
                                                                                    

consensus_10296#2       NAAAAGCATTATAATTTTACTTCC-AGAGA---AGATTTCTTGGGACCCCCATGAGGCCC 491
consensus_10296#9       CATCAACACTAAACATAAAAACAA-ATAGATTAAAACTTCTGGTAACTCCCATCTATTAA 118
consensus_10296#4       TAGTCTCGTGCAGGGAGGGATGGC-GTTGGCTGTAGCAGTTGCTGTCGACGGAGAGAAGC 333
consensus_10296#10      ------------------------------------------------------------
consensus_10296#6       TCTTACTGAATATCAAGAGAGAAC-ACGGTGGGAATCACGAGCCTTTTTATTCCAAAATC 318
consensus_10296#8       ------------------------------------------------------------
consensus_10296#7       ATGTTAACTTGAATATGCTTATAC-TTTAAATGGAATAATGGGATTTATGATCAGAA--- 301
consensus_10296#1       TCAGCCTACTGACTCTAGTTCTTCGAGCAAACAAAGTGATAAAGATCTACATCAGATCGA 524
consensus_10296#3       CAAATAGGACAACGAAACGCGTGTCCTAGATTCCCCTGCTAGCCACTATCCATCTTTGCT 385
consensus_10296#0       TCGTGGTTTGACTTCTCTATTGGTCTTTATTTCATTTATAAAATCCGGACAACAAGGATA 593
consensus_10296#5       TCACGCACGATTTCTCGCTCAGCTGTTGTCGTGAAACTGTAACCACGTTCCGTCAGGATC 340
                                                                                    

consensus_10296#2       TCTGCGATATTTGTGCGCCCAGGCGATATTCCCATAGGAGGGCCATTATTT--------- 542
consensus_10296#9       ATTA-AATACCAATATCTCCTATTTATATCC----------------------------- 148
consensus_10296#4       AGTGGGACGGTGCGGCTACTGGGCGGACATCGAATGTTGATAGCTCAGTGGGGTCCTGGA 393
consensus_10296#10      ------------------------------------------------------------
consensus_10296#6       ------------------------------------------------------------
consensus_10296#8       ------------------------------------------------------------
consensus_10296#7       ------------------------------------------------------------
consensus_10296#1       AGAAGATATAAAAATCCCTTCAGTTGTTCAAGGATTTCAGGCATTTAGCGGTACAGGTTA 584
consensus_10296#3       TACTAAATATAGTTATAAAATGGGTAGATATCAAACTGGA-------------------- 425
consensus_10296#0       TGTAGATGGTTAATGTTCCCAAATTTTCTTTAAAATATATGTGTATCTCTGTCAGTTTTC 653
consensus_10296#5       TTCATCAAGTAGTCGGTCAAAT-------------------------------------- 362
                                                                                    

consensus_10296#2       ------------------------------------------------------------
consensus_10296#9       ------------------------------------------------------------
consensus_10296#4       GCGCCC------------------------------------------------------ 399
consensus_10296#10      ------------------------------------------------------------
consensus_10296#6       ------------------------------------------------------------
consensus_10296#8       ------------------------------------------------------------
consensus_10296#7       ------------------------------------------------------------
consensus_10296#1       TCGGTTAGATGGGAAAAANTAACAGNGATAAACTGATGAAGCAGATAATGGTCAATCAT- 643
consensus_10296#3       ------------------------------------------------------------
consensus_10296#0       AATCTATTTTCTTAGTAACCAAATTGACACATCTTTTTGAGTTCAATGTAGTTGAATTTA 713
consensus_10296#5       ------------------------------------------------------------
                                                                                    

consensus_10296#2       -----------------
consensus_10296#9       -----------------
consensus_10296#4       -----------------
consensus_10296#10      -----------------
consensus_10296#6       -----------------
consensus_10296#8       -----------------
consensus_10296#7       -----------------
consensus_10296#1       -----------------
consensus_10296#3       -----------------
consensus_10296#0       TTTGGTCAATATAACTT 730
consensus_10296#5       -----------------