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Schistosoma mansoni
cluster # 10332 cluster # 10332       Sequences # 15       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10332#0 length = 932 sequences # 10  
consensus_10332#1 length = 564 sequences # 4  
consensus_10332#2 length = 513 sequences # 1  

consensusID : consensus_10332#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 932
fasta sequence
                              [AATTTGGCACGAGGGCCAAGGGTCTCATCATTGATGCTTTTGGTGATTTAAGAGATCAGTTAGAACAGGTAAAAGAAGACCTCGAATCGAAATGTTTTATATGTGGTATTGGCAAAGAATACTTCGATAAAATACCACATGGCTTTGAACAACATGTGGAAAAAGAACATAATTTTGCAAACTACATGTACTTTCTAATGCATATAATCAATAAGCCGGATACAGAATACACTGGTCAAGAAACATATGTTTGGGAGTTGTATCAACAAAGATGTTGGGATTTCTTTCCTATTGGTGATTGTTTCAGAAAACAATATGAAGAAGAATTACAACCGAAATAATTAATGATAGGTACACACTATATGAAATGAACTAAAAAGTCAGACAAAGCACTAGTAGCAATGAAAGTTATCTCCTCCTTCTCTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTTTCAAAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTTTTGCTTATCGCTTTCCCTCTTTCTATCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAATTCTAATCAGTCTTGACCTTGTCAACCTACAGAACTGAGAAGTCTGAA--AATATATNNNCAGC-AAT-AGT-CT-AGT-AAATGGAAAGTGGGATG-AACAAAA--TTATAC-ATATC-TGCTC-AACTATTATT--ACACCAGT-CT-ATTTA-GAT---CACCAATGCCCATAGTCCTGCTGCATACTAAATATATAATGAGGAATAATGTGGTAATTTATACTGTCAATG]

[+] EMBL CD080856             [AATTTGGCACGAGGGCCAAGGGTCTCATCATTGATGCTTTTGGTGATTTAAGAGATCAGTTAGAACAGGTAAAAGAAGACCTCGAATCGAAATGTTTTATATGTGGTATTGGCAAAGAATACTTCGATAAAATACCACATGGCTTTGAACAACATGTGGAAAAAGAACATAATTTTGCAAACTACATGTACTTTCTAATGCATATAATCAATAAGCCGGATACAGAATACACTGGTCAAGAAACATATGTTTGGGAGTTGTATCAACAAAGATGTTGGGATTTCTTTCCTATTGGTGATTGTTTCAGAAAACAATATGAAGAAGAATTACAACCGAAATAATTAATGATAGGTACACACTATATGAAATGAACTAAAAAGTCAGACAAAGCACTAGTAGCAATGAAAGTTATCTCCTCCTTCTCTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTTTCAAAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAGNCGACGCTGTTTGCTTTTTGCTTATCGCTTTCCCTCTTTCTATCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAATTCTAATCAGTCTTGACCTTGTC ACCTACAGAACTGAGAAGTCTGAA  AATATATNNNCAGC AAT AGT CT AGT AAATGGAAAGTGGGATG AACAAAA  TTATAC ATATC TGCTC AACTATTATT  ACACCAGT CT ATTTA GAT   CACCAATGCCCATAGTCCTGCTGCATACTAAATATATAATGAGGAATAATGTGGTAATTTATACTGTCAATG]
[-] EMBL CD196151             [                                                             AGANCAGGTAAAAGAAGACCTCGAATCGAAATGTNTTATATGTGGTATTGGCAAAGAATACTCNGATAAAATACCACATGGCTTTGAACAACATGTGGAAAAAGAACATAATTTTGCAAACTACATGTACTTTCTAATGCATATAATCAATAAGCCGGATACAGAATACACTGGTCAAGAAACATATGTTTGGGAGTTGTATCAACAAAGATGTTGGGATTTCTTTCCTATTGGTGATTGTTTCAGAAAACAATATGAAGAAGAATTACAACCGAAATAATTAATGATAGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI977145             [                                                                         AGAAGACCTCGAATCGAAATGTTTTATATGTGGTATTGGCAAAGAATACTTCGATAAAATACCACATGGCTTTGAACAACATGTGGAAAAAGAACATAATTTTGCAAACTACATGTACTTTCTAATGCATATAATCAATAAGCCGGATACAGAATACACTGGTCAAGAAACATATGTTTGGGAGTTGTATCAACAAAGATGTTGGGATTTCTTTCCTATTGGTGATTGTTTCAGAAAACAATATGAAGAAGAATTACAACCGAAATAATTAATGATAGGTACACACTATATGAAATGAACTAAAAAGTCAGACAAAGCACTAGTAGCAATGAAAGGTATCTCCTCCTTCTCTAAGTTTACGATATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTTTCAAAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTATCGTCGATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAG                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD139918             [                                                                                                                                                             aGAAAAAGAACATAATTTTGCAAACTACATGTACTTTCTAATGCATATAATCAATAGGCCGGATACAGAATACACTGGCCAAGAAACATATGTTTGGGAGTTGTATCAACAAAGATGTTGGGATTTCTTTCCTATTGGTGATTGTTTCAGAAAACAATATGAAGAAGAATTACAACCGAAATAATTAATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD145844             [                                                                                                                                                                                                                                                          TTGGGAGTTGTATCAACAAAGATGTTGGGATTTCTTTCCTATTGGTGATTGTTTCAGAAAACAATATGAAGAAGAATTACAACCGAAATAATTAATGATAGGTACACACTATATGAAATGAACTAAAAAGTCAGACAAAGCACTAGTAGCAATGAAAGTTATCTCCTCCTTCTCTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTTTCAAAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTTTTGCTTATCGCTTTCCCTCTTTCTATCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAATT                                                                                                                                                                                                                                        ]
[-] EMBL CD145763             [                                                                                                                                                                                                                                                          TTGGGAGTTGTATCAACAAAGATGTTGGGATTTCTTTCCTATTGGTGATTGTTTCAGAAAACAATATGAAGAAGAATTACAACCGAAATAATTAATGATAGGTACACACTATATGAAATGAACTAAAAAGTCAGACAAAGCACTAGTAGCAATGAAAGTTATCTCCTCCTTCTCTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAGTGTGCTTATTTTTCAAAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTTTTGCTTATCGCTTTCCCTCTTTCTATCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAATT                                                                                                                                                                                                                                        ]
[-] EMBL CD145801             [                                                                                                                                                                                                                                                                                                                          TATGAAGAAGAATTACAACCGAAATAATTAATGATAGGTACACACTATATGAAATGAACTAAAAAGTCAGACAAAGCACTAGTAGCAATGAAAGTTATCTCCTCCTTCTCTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATCTTTCAAAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTTTTGCTTATCGCTTTCCCTCTTTCCGTCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAATT                                                                                                                                                                                                                                        ]
[+] EMBL CD135977             [                                                                                                                                                                                                                                                                                                                                                  TAATTAATGATAGGTACACACTATATGAAATGAACTAAAAAGTCAGACAAAGCACTAGTAGCAATGAAAGTTATCTCCTCCTTCTCTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTTTCAAAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATNAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTTTTGCTTATCGCTTTCCCTCTTTCTATCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAATTCTAATCAGTCTTGACCTTGTCAACCTACAGAACTGAGAAGTCTGAA  ATAATAa                                                                                                                                                                                 ]
[-] EMBL CD178766             [                                                                                                                                                                                                                                                                                                                                                     TTAATGATAGGTACACACTATATGAAATGAACTANANAGTCAGACAAAGCACTAGTAGCAATGAAAGTTATCTCCTCCTTCTCTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTTTCAAAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTTTTGCTTATCGCTTTCCCTCTTTCTATCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAATTCTAATCAGTCTTGACCTTGTCAACCTACAGAACTGAGAAGTCTGAAATAATA ATAACAAGCAAATAAGTACTAAGTAAAATGGAAAGTGGATTGAAACAAAAATTTATACAATATCATGCTCAAACTATTATTTAACACCAGTACTAATTTAGGATCAACACAAATGCCCA                                                            ]
[+] EMBL CD068218             [                                                                                                                                                                                                                                                                                                                                                                          ATGAAATGAACTAAAAAGTCAGACAAAGCACTAGTAGCAATGAAAGTTATCTCCTCCTTCTCTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTTTCAAAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATAAAATGTCAAATTTAATCTTAATTCCAA                                                                                                                                                                                                                                                                                                                                                                                                ]


>consensus_10332#0 AATTTGGCACGAGGGCCAAGGGTCTCATCATTGATGCTTTTGGTGATTTAAGAGATCAGT TAGAACAGGTAAAAGAAGACCTCGAATCGAAATGTTTTATATGTGGTATTGGCAAAGAAT ACTTCGATAAAATACCACATGGCTTTGAACAACATGTGGAAAAAGAACATAATTTTGCAA ACTACATGTACTTTCTAATGCATATAATCAATAAGCCGGATACAGAATACACTGGTCAAG AAACATATGTTTGGGAGTTGTATCAACAAAGATGTTGGGATTTCTTTCCTATTGGTGATT GTTTCAGAAAACAATATGAAGAAGAATTACAACCGAAATAATTAATGATAGGTACACACT ATATGAAATGAACTAAAAAGTCAGACAAAGCACTAGTAGCAATGAAAGTTATCTCCTCCT TCTCTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTT TCAAAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGA TAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACA GTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTTT TGCTTATCGCTTTCCCTCTTTCTATCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAAT TCTAATCAGTCTTGACCTTGTCAACCTACAGAACTGAGAAGTCTGAAAATATATNNNCAG CAATAGTCTAGTAAATGGAAAGTGGGATGAACAAAATTATACATATCTGCTCAACTATTA TTACACCAGTCTATTTAGATCACCAATGCCCATAGTCCTGCTGCATACTAAATATATAAT GAGGAATAATGTGGTAATTTATACTGTCAATG



consensusID : consensus_10332#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 564
fasta sequence
                              [CTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTTTCAAAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTTTTGCTTATCGCTTTCCCTCTTTCTATCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAATTCTAATCAGTCTTGACCTTGTCAACCTACAGAACTGAGAAGTCTGAAATAATAATAACAAGCAAATAAGTACTAAGTAAAATGGAAAGTGGATTGAAACAAAAATTTATACAATATCATGCTCAAACTATTATTTAACACCAGTACTAATTTAGGATCAACACAAATGCCCATTAGTTCCCTTGCATGCAATAACTTAAAAATATTATAAATATGATGAAATATATGTTGTGTTAATTTTAATTACTATGTTCAAATAGAAAATAGC]

[-] EMBL CD077209             [CTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTTTCAAAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTTTTGCTTATCGCTTTCCCTCTTTCTATCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAATTCTAATCAGTCTTGACCTTGTCAACCTACAGAACTGAGAAGTCTGAAATAATAATAACAAGCAAATAAGTACTAAGTAAAATGGAAAGTGGATTGAAACAAAAATTTATACAATATCATGCTCAAACTATTATTTAACACCAGTACTAATTTAGGATCAACACAAATGCCCATTAGTTCCCTTGCATGCAATAACTTAAAAATATTATAAATATGATGAAATATATGTTGTGTTAATTTTAATTACTATGTTCAAATAGAAAATAGC]
[-] EMBL CD139869             [                                             TGTGC TATTTTTCAAAAAAAAAGACAAAATG TATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTTTTGCTTATCGCTTTCCCTCTTTCTATCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAATTCTAATCAGTCTTGACCTTGTCAACCTACAGAACTGAGAAGTCTGAAATAATAATAACAAGCAAATAAGTAC                                                                                                                                                                                                   ]
[-] EMBL AI067942             [                                                                                TTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTTTTGCTTATCGCTTTCCCTCTTTCTATCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAATTCTAATCAGTCTTGACCTTGTCAACCTACAGAACTG                                                                                                                                                                                                                                       ]
[-] EMBL CD140046             [                                                                                                                                                                                                                                                                                 TCTA TTTTTTCCCTAGTCTGAATTCTAATCAGTCTTGACCTTGTCAACCTACAGAACTGAGAAGTCTGAAATAATAATAACAAGCAAATAAGTAC                                                                                                                                                                                                   ]


>consensus_10332#1 CTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTTTCA AAAAAAAAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCGATAA AATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGACAGTG TCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTTTTGC TTATCGCTTTCCCTCTTTCTATCAGTTCGTTTATCTATTTTTTTCCCTAGTCTGAATTCT AATCAGTCTTGACCTTGTCAACCTACAGAACTGAGAAGTCTGAAATAATAATAACAAGCA AATAAGTACTAAGTAAAATGGAAAGTGGATTGAAACAAAAATTTATACAATATCATGCTC AAACTATTATTTAACACCAGTACTAATTTAGGATCAACACAAATGCCCATTAGTTCCCTT GCATGCAATAACTTAAAAATATTATAAATATGATGAAATATATGTTGTGTTAATTTTAAT TACTATGTTCAAATAGAAAATAGC



consensusID : consensus_10332#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 513
fasta sequence
                              [CTTTTAATTTCTTTCGCAAATTCTATGTGAAAGATAATGATGGTGTGCCTGATCCAAAATGTAATGATACGAAAACTTGTTTCATATTCCACTTGCATACTGGATAAGAGCTGGTGGTGGCATTGGGGATGAAATTGAAGCGCCTGACGGTGATGAGTCAGAAAACTATCGAATCTTATTCGATCTGACCTTTTCTTCTTTGTCATCATTATTCTGTTGGCAATTATCCAAGGTCTCATCATTGATGCTTTTGGTGATTTAAGAGACCAGTTAGAACAGGTAAAAGRAGACCTCGAATCGAAATGTTTTATATGNGGTATTGGSAAAGGATACTTCGATAAAATACCACATGGCTTTGCACAACATATGGGAAAGVACATAATTTTGCAACTACATGTACTTTAATGCATATAATCAATRGCCGGATACAGATACACTGTCAACCGTCTCCBGGKCCGGGCTCGGATTCGTATCCAGGCCWWGCTGTTCCGGTGRATGTTTCCGTCCCAWCCC]

[+] EMBL BE519384             [CTTTTAATTTCTTTCGCAAATTCTATGTGAAAGATAATGATGGTGTGCCTGATCCAAAATGTAATGATACGAAAACTTGTTTCATATTCCACTTGCATACTGGATAAGAGCTGGTGGTGGCATTGGGGATGAAATTGAAGCGCCTGACGGTGATGAGTCAGAAAACTATCGAATCTTATTCGATCTGACCTTTTCTTCTTTGTCATCATTATTCTGTTGGCAATTATCCAAGGTCTCATCATTGATGCTTTTGGTGATTTAAGAGACCAGTTAGAACAGGTAAAAGRAGACCTCGAATCGAAATGTTTTATATGNGGTATTGGSAAAGGATACTTCGATAAAATACCACATGGCTTTGCACAACATATGGGAAAGVACATAATTTTGCAACTACATGTACTTTAATGCATATAATCAATRGCCGGATACAGATACACTGTCAACCGTCTCCBGGKCCGGGCTCGGATTCGTATCCAGGCCWWGCTGTTCCGGTGRATGTTTCCGTCCCAWCCC]


>consensus_10332#2 CTTTTAATTTCTTTCGCAAATTCTATGTGAAAGATAATGATGGTGTGCCTGATCCAAAAT GTAATGATACGAAAACTTGTTTCATATTCCACTTGCATACTGGATAAGAGCTGGTGGTGG CATTGGGGATGAAATTGAAGCGCCTGACGGTGATGAGTCAGAAAACTATCGAATCTTATT CGATCTGACCTTTTCTTCTTTGTCATCATTATTCTGTTGGCAATTATCCAAGGTCTCATC ATTGATGCTTTTGGTGATTTAAGAGACCAGTTAGAACAGGTAAAAGRAGACCTCGAATCG AAATGTTTTATATGNGGTATTGGSAAAGGATACTTCGATAAAATACCACATGGCTTTGCA CAACATATGGGAAAGVACATAATTTTGCAACTACATGTACTTTAATGCATATAATCAATR GCCGGATACAGATACACTGTCAACCGTCTCCBGGKCCGGGCTCGGATTCGTATCCAGGCC WWGCTGTTCCGGTGRATGTTTCCGTCCCAWCCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10332#0      AATTTGGCACGAGGGCCAAGGGTCTCATCATTGATGCTTTTGGTGATTTAAGAGATCAGT 60
consensus_10332#1      ------------------------------------------------------------
consensus_10332#2      ------------------------------------------------------------
                                                                                   

consensus_10332#0      TAGAACAGGTAAAAGAAGACCTCGAATCGAAATGTTTTATATGTGGTATTGGCAAAGAAT 120
consensus_10332#1      ------------------------------------------------------------
consensus_10332#2      ------------------------------------------------------------
                                                                                   

consensus_10332#0      ACTTCGATAAAATACCACATGGCTTTGAACAACATGTGGAAAAAGAACATAATTTTGCAA 180
consensus_10332#1      ------------------------------------------------------------
consensus_10332#2      ------------------------------------------------------------
                                                                                   

consensus_10332#0      ACTACATGTACTTTCTAATGCATATAATCAATAAGCCGGATACAGAATACACTGGTCAAG 240
consensus_10332#1      ------------------------------------------------------------
consensus_10332#2      ------------------------------------------------------------
                                                                                   

consensus_10332#0      AAACATATGTTTGGGAGTTGTATCAACAAAGATGTTGGGATTTCTTTCCTATTGGTGATT 300
consensus_10332#1      ------------------------------------------------------------
consensus_10332#2      ------------------------------------------------------------
                                                                                   

consensus_10332#0      GTTTCAGAAAACAATATGAAGAAGAATTACAACCGAAATAATTAATGATAGGTACACACT 360
consensus_10332#1      ------------------------------------------------------------
consensus_10332#2      ------------------------------------------------------------
                                                                                   

consensus_10332#0      ATATGAAATGAACTAAAAAGTCAGACAAAGCACTAGTAGCAATGAAAGTTATCTCCTCCT 420
consensus_10332#1      ------------------------------------------------------------
consensus_10332#2      ------------------------------------------------------------
                                                                                   

consensus_10332#0      TCTCTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTT 480
consensus_10332#1      ---CTAAGTTTTCGTTATGTATTCAATGCCTAATAATACCCATTTAAATGTGCTTATTTT 57
consensus_10332#2      -CTTTTAATTTCTTTCGCAAATTCTATGTG-AAAGATAATGAT---GGTGTGCCTGATCC 55
                           * * ***   *     **** ***   **  ***   **     ***** *  *  

consensus_10332#0      TCAAAAAAA-AAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCG 539
consensus_10332#1      TCAAAAAAA-AAGACAAAATGTTATTTTATCGCCTTTATTAATTAATTGCGCTTTCGTCG 116
consensus_10332#2      AAAATGTAATGATACGAAAACTTGTTTCAT---------------ATTCCACTTGC---- 96
                         **   **  * ** ***  ** *** **               *** * *** *    

consensus_10332#0      ATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGAC 599
consensus_10332#1      ATAAAATGTCAAATTTAATCTTAATTCCAACCAGCTGAACACTCATGAGAATAGCATGAC 176
consensus_10332#2      ATACTGGATAAGAGCTGGTGGTGGCATTGG--GGATGAA-ATT-----GAAGCGCCTGAC 148
                       ***     * * *  *  *  *           * **** * *     ***  ** ****

consensus_10332#0      AGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTT 659
consensus_10332#1      AGTGTCCATCTGAAAAAAACCAATCAAAACGTTATCCTGACAAGCGACGCTGTTTGCTTT 236
consensus_10332#2      GGTGATGAGTCAGAAAA---CTATCGAATC-TTATTCGATC---TGACCTTTTCTTCTTT 201
                        ***   *     ****   * *** ** * **** *   *    ***  * * * ****

consensus_10332#0      TTGCTTATCGCTTTCCCTCTTTCTATC---AGTTCGTTTATCTATTTTTTTCCCTAGTCT 716
consensus_10332#1      TTGCTTATCGCTTTCCCTCTTTCTATC---AGTTCGTTTATCTATTTTTTTCCCTAGTCT 293
consensus_10332#2      GTCATCATTATTCTGTTGGCAATTATCCAAGGTCTCATCATTGATGCTTTTGGTGATTTA 261
                        *  * **   * *         ****    **    * **  **  ****    * *  

consensus_10332#0      GAATTCTAATCAGTCTTGACCTTGTCAACCTACAGAACTGAGAAGTCTGAAAATATATNN 776
consensus_10332#1      GAATTCTAATCAGTCTTGACCTTGTCAACCTACAGAACTGAGAAGTCTGAAATAATAATA 353
consensus_10332#2      AGAGACCAGTTAGAACAGGTAAAAGRAGACCTC-GAATCGAAATGTTTTATAT-GNGGTA 319
                         *  * * * **    *        *  *  * ***  ** * ** * * *        

consensus_10332#0      NCA-GCAATAGTCTAGTAA-----ATGGAAAGTGGGATGAA-CAAAA--TTATACA-TAT 826
consensus_10332#1      ACAAGCAAATAAGTACTAAGTAAAATGGAAAGTGGATTGAAACAAAAATTTATACAATAT 413
consensus_10332#2      TTG-GSAAAGGATACTTCGATAAAATACCACATGGCTTTGCACAACA-TATGGGAAAGVA 377
                           * **        *       **   *  ***  *    *** *   *    *    

consensus_10332#0      C-TGCTCAA-CTATTATT---ACACCAGTCT--ATTTAG----ATCACCAATGCCCAT-A 874
consensus_10332#1      CATGCTCAAACTATTATTTA-ACACCAGTACTAATTTAGGATCAACACAAATGCCCATTA 472
consensus_10332#2      CATAATTTTGCAACTACATGTACTTTAATGC--ATATAATCAATRGCCGGATACAGATAC 435
                       * *  *    * * **     **   * *    ** **         *  ** *  **  

consensus_10332#0      GTCCTGCTGCATACTA-AATATATAATGAGGAATAATGTGGTAATTTATAC----TGTCA 929
consensus_10332#1      GTTCCCTTGCATGCAATAACTTAAAAATATTATAAATATGATGAAATATATGTTGTGTTA 532
consensus_10332#2      ACTGTCAACCGTCTCCBGG-KCCGGGCTCGGATTCGTATCCAGGCCWWGCTGTTCCGGTG 494
                                * *                   *    * *                 *   

consensus_10332#0      ATG----------------------------- 932
consensus_10332#1      ATTTTAATTACTATGTTCAAATAGAAAATAGC 564
consensus_10332#2      RATGTTTCCGTCCCAWCCC------------- 513
                                                       




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)