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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10336#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 407 fasta sequence
[ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACATATCACAAAACTACCACC-CCCCCCAAAAGAAAAAGAAAAAGAA]
[+] EMBL CD144770 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGCCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCGCCATCAGTAACACAT ]
[+] EMBL CD144743 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACAT ]
[+] EMBL CD144813 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACAT ]
[+] EMBL CD144830 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACAT ]
[+] EMBL CD144793 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTATTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCAT ]
[+] EMBL CD144809 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCAT ]
[+] EMBL CD144747 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGCGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTCAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACAT ]
[+] EMBL CD144737 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCCTCTTAACAACCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACAT ]
[+] EMBL CD144751 [ACCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTATTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAACCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCAT ]
[-] EMBL CD144746 [ CCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTCTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGCTCTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACATA ]
[-] EMBL CD088274 [ CCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATCACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGCCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACATA ]
[-] EMBL CD144714 [ CCTGATCGCTGGAATGCTTTAGGATTTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATC ]
[-] EMBL CD144733 [ CCTGATCGCTGGAATGCTTTAGGATCTGCAGATCGCTGATGAGAAACTGTGGTGAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAATCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACATA ]
[+] EMBL CD149189 [ GAATGAGTACACAGTCAGGGACAACCAAATGTATTTAAACACAAAATTACAGAATCTCTTAGTAAAGTCTGAGAACCATACAACAAATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCTTTTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCATTCTTTGTTGTTGTTGTTTTCTTTTCTTTCATCTTCTTAACAATCTGCTTCCAAACATTTCACTTCCGATTGGTGAAACATACTACTACTTATATCTATCACCATCAGTAACACATATCACAAAACTACCACC CCCCCCAAAAGAAAAAGAAAAAGAA]
[-] EMBL CD133075 [ ATATTTAATTTGCAAAATATCAATCAGATGTCTCAAACTTGACCGTTTCGGGTGCAAATATTAGTCAATAATATCAGACTTCATTGTTCTTTCGTTTCTATACTAATCACTCTTCGATGATGTTGTTTTCTTTTCTTTCATAATATTAACAATCTGCTTCCAAACATTTCACTTCCGATTGATGAAACATACTACTACTTATATCTATCACCATCAGTAACACATATCACAAAACTACCACCTCCTCCCA ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||